Spg030164.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg030164.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cytochrome c-type biogenesis ccda-like chloroplastic protein
Location	scaffold6: 14782023 .. 14787567 (-)
Sequence length	1077
RNA-Seq Expression	Spg030164.1
Synteny	Spg030164.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGAAATTTGAAAATAGAAGATTCAGCTTGGATCTCCATTGCGTGGCTAAGTTTTGATTGCGTGCGAATTTGCATTTCGCGATTGCAAAAAGAAAATATCCACCCTTTGCAAAAACAAATCACTCTCTCGCTTTCGTTATTTCTTCCATTTTTTCATCTGTCTTGTCTGGTGGGCAATAGAAAGCTTTGAACCAGAAAACCCATGCTCAACCCCTAAGCTTTCTGGGCATCGGAGTACTGTCTCGATTAACTCTGCACTTAATTCCGGAGTTATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCGGCATCAATTCCATCAGAATTCCCACCTCTAAACGTTTTCAGAGCAAGACGCGAGGTAATACCCTTTAATTTGCTTGTCTTTCTCTGTATCATTGCTTGAAATAATTTACTTTGTTTGTCTGTATAACTATGGGAGTGGCGAATTTTTACAATTTGAAACAACTCCAAGTGACTGAAAGTCTGAACCCGTAGTTTCTAGAATTGGAAGCACAAAAACAAACACGCACCCAATTTTCATCTTACTGAAAATGACATAGAAAGTACCACTTGATGATGTTGAGAAATTTTCGATTGAATCCGACATCATATTGAAGCATTGAGTATTGTATGGTTTATCCAAGGAGAAATTTAGGGAACATATTGTCAGATGGGGGTTGTTTTGATCACCATGTATTCAACTGTCTGATAGAGGGTCACTGGTTTTTTTAGGTAAATATGTCGTGCCTATGAAATTGGTAGGGAGACTATTCGCAGCTGAGGATCAAAGTAAAGATATTGAGTCAGTGGAGAGTAAAAACAGCAGCAATCATTTTCAAGCCGTGGCTTTTGTAAATGCCATTTCTGGTAATGCTTCTGCTCTCTGCCTGAGGTGAAAGGTTGTTCTTTTTCCTTCTTAATAGTTGATATCTCTTCCTACAATTGTTAGTAAACTTTCTTGTTCTGCATCAATGAACCAACTATTTTTTTATCTGACCTCGTGTTGAAATGAGTGAGAACTTACTTGAGATTTCTTTGTAACTTCGTTTTGGAATTTCTCGAAGTTGTTTGAATTTCTATCTGAAATTTTGAGAAATGGCTTGTTTTTACTTCAGAATTTGCATGGAAGCAACTAGCAGAAATTCATCACTGCTTGAGTTTATGAAACAATTATGAGTACATAATTTATCTATGTCCTGTGACGATGTGGGTTATTCTGTTTCAATTGATAGTTTGTCCATTAGATAACCATAATCGGTAATTTCATAAGTAACTGAATTGATAATTCATAAGCAATCAATTTTGTGATATCATAGGCAACTCTTATTTTCCTCTCATCCTGTTTTTCATTCCTGTTAAATAGGCTGTACTTTATCTATTAGGAATTAAATACATCTGGGGCCACAGCCCTGCAGTGGTTTACTGTGCATATTCTTAATTCTTTTTCATTCTCAATATTTCCAGCGACAAGTTTCCTTGCAGTAGACGCAGCAAAGGCTGGAGCTTTAAAGGATATGTGGGTAAGAGTTTGCAGTCTTCACGTATTCTGTTTTCTAAAGCCACCTGATCTCAAGTCTTTATTCTTTTGAGATTTTAATTCCCTAAAATCCATTTATTTAATTCCTTTTATTGATTTTGAAAACCATTTTTCACCAATTCCTTAAGATTCTTGATAAAATCAACGTGTATTTCTCTTGGACATAGAGTCATTAGATGTTTCTTTATTTGTAAGTGAGTTCCAATTGTTTATACTTTGACAATGACAAAGATTTTGATTATTTGTTCATTTTACTATTTTTTGGGGGTGGGGGTTGTGTGCCAGATAAGAATGGTTAATTCATTATGACTTCAAAAGAACAGAAGCTTGGTAAGAGGGCTGCTCTTTAGCATTGCTCGCCATCTTATTTTGCTTGCTTAAGATGCTGGTCTTGGCTACCATGGTAACTAAATTAGTTTGCATACATATTATGCTTGGTGTATAACTGTATATTATATCAGGAACTAGAATTATTTTCCTTCAAGTCAGGAAGGAGCTGCTTCTGTTTATACTGTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAATTATCTGCTCTCAGTTTTACTAGGTTTAGTCTTGTGCTTTTTCTCCCCTTTACTTTTCATGTCTTTTAATGATTTGAGTTTGATAGTAAACAGTTCTTTTCTATTTCTCTGCTCTTGGCCACTTATTCCTTTATATAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACCAGCCTTTCCCCTTGCACATTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGTAAGCCTTTCATACACACTTTTTTGCAACCTCGGGATATTATTTCCTGTCTTATGTTAATGCCGTGATTCAATGGAACTTTGTAGGAGCTTTTGGATCAGGGAAGAGCAGAACAGAGGTAAATTACTTTCTAAACGAGTTCCAACTCTGTGTTATCTTAGTATCAAATTGTAGAAATCTTTGAATCAGTTGAGCTCCACATATTTGGAGATACATCCAAGGTCCTAGGCTCAACCTTGTAGGCTGAAAACTTTGTAATCTAAAACCTTTGTTGTCTCTCTAAGTTGGGCTTGGGGTAGGTAAATCCTTCTCCGGATTGATGGGGTAGACCATAAGCATAATATAAGGAGTGGGGCTTTCATCACCCCAGTTATAGAAAAATAATAATAATAAACCAGGACTAGAAATTATTCAACGGTTCTATTATGCCAGAGTCTTCATAATTTTTACTCTCTCCAGATTTATCATCAATTTTAGGGTGTGTTTGGTTTAACTTTTCAAGTGTTTAATTTTGAAAAGAAAAAATCATTTTGAAAAAAATTCTAGTGTTTGGCAACTACTAAAAATGACTTATTGAGAGAAACACTTGAAGGCAAATTTTTTAAAAAGAGATTTTAAGTATATAATAACTTGTGTATAAAAACACTTATGAGGAAACATATGAGTGTTTAAATTCTAAACAATTTTTATACAAAATGTTTAAAAAGAAATACATTCTTGAAAAACACTTAAACAAAAAGGTATTCCAAACGGACCCTTACTATAGCTTCTAGTTACATTGAACTTGAGAGCATTTCTATTGAAATATATGAATCCTTCTGCTCTGATGATCGGGATGAGTACACATGTTTATGTGGGATTGTTTCAGTAGAAATCGTTAAAGTCTGTGCTGATGGTCCTGCATTGAGAAAAGGCAATTAATTGGAATTTGGTCACTTCGTATTTTCAGGTTGTTGGAAACTCTGTTGCTTTCTCTTTAGGACTTGCTACGACCCTAGCACTGTTAGGCATAGCTGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCTTTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACTTATTGGAGGTACTCATCAAGCTTGATTATTTGTATCAACGATGAAGTTGATATGCCGATTTTGAGTGAACAGTTGACTACTGCCCAAAGTTTTTATCTTTTTTACTGAATTGTTGCGTAATGTTCCTGAAATGTAATTCACAACCTCATAAGGACATCAATTCATGATATGGAACTCTGTCCTGGAGTTAATTTTTATTATTATTTTCATTTTGATGATTAACAACAACAGGCATAAAGCACAAAGATAGAGTACTTTGGTATTGTTAAATGCTATTCACAATCATCTTTTTCTGTGGAAAAGTTCATTAAATTTGTCTCATTGTAAATAGATATCAATTTCAATTATTTGTAAGTATCAGTGGATTGCAGAACCTGATAACTAAGTACTTAAGACTGTTTTTTTCCAATTTCTTTTTGGTCGTGTCTGTTGATGGATTGATTCTATAATTGGTCATGAATTGCAGATAATTGAGTTGCAACTACCCTCATTCTTTGACAATTTTGATCCCCGTTCTGCCGCTGCCAACTTTCCATCAAGTAATTGGCCCCTCCATTTCTTGCTGACCTTGGTTACTCATTTAAATGCTCTAACAAGCTTCTAAATCTGATATATTAGGTGTGCAAGCATATCTAGCTGGGCTTACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGTTGGCTACGTTGCTTGGATATGTAGCTACATCCAAGGTGCCTTAAATCATTTCTTATGCCGATACAACCTTGATCTTAGTTTCATTTCTTATACACAGGAGTGAGTAAGGAGGAATTTTTTTTAAAAAATATATTCAACAAATGCGTAAGCGTCTCTCTCTCTCTCACCCATTTGTCCTATGAAATGAATGGAAAATAGATCATCAGTATACCCTTGTGGGTAGTATAGTGTTAGGCTACTTTTCTAAGGACTTGGGATGGTTAGTTTAGAGATACCCTCTCAAGTCTTAAGTATAAGATCCCAAGTTGAATTGAAATTTTGATAACTGAAAAGTCCTCTTTCAAGAATCGATAAGGTGGATCATGAACATAATGCAAGGAGTTTGCCACTAATTTTCAGAAATGGACATCGTAATTCTTTCCTCGGTGTTCCTGTTAATGACTACTATCGTTTATAACAGGATCCGTTAGTCGGGGGCAGCCTCCTTTTGACATACACAACTGGCTACGTCGTGCCGCTACTTCTTGCAGCTTCATTTGCTGGAGCATTACAGGTAATATATGGTTATAGTAGGACGGAGAATTTACCTGCATATATCTCAATATATGCAGACTAGCTGAATGAAGTATAAGTGTCTTGAAAATGTTGGCCCCCTTTGTTATTTTTGATAATCTAATTCATTGTGGGATTTAGTTTTGTGATGGAGTGTGTGTTAACATGCGTGCAGAGCCTTCTGTCATTCCGCAAGTTCTCATCATGGATTAATCCTATAAGGTAAGTCATTTAAGCTAGTTTTAGAGGTGCCAATTGTGAAACGACAGATATGAATGGGTTTGTTTTGTTGTTGATGAATGCAGTGGTGCTCTCCTGTTGGGTGGAGGTGTTTATACTTTCTTGGACAGAATGTTTCCAGTCACAATGTCAATGTAAGTGTAGAAATGTTATATAAATACAAACTCCTCACATAAATGATAAGCTTATTTATTATGTTGCTCCTCTCATTCAAACGTCATTCATATCCATATTTTTCTGTGTTTTCTTTTGGCCTCACTCTCTTAAATTTGTTGTGGGTAAAGCTCCACCGCTTCTTGCCATTTTCTTTTTTTTTTTTTTTTTTTTGGATTCTTATGTTTCCCTTTTGAAATGGTTATTAGAGTGATTTTAGATTTGTGGATTGGTGTTTTTTTCTTCTTTCGAAAAAAGTAAAATAAAAGAAAAAAATAGAAAAAGGAGGAAAAAAAAAAAAAAGGTAGGATTCTTTTCCTCTGCTTTTTATTATTTTAAAAGTGGGTTTGTTTTTCTTTGATTTGTTTGATTGCAACCTTTCTTAACAATTTTTACTTTTTGTAATTTCACATTTTGAATGGTTTGCTTCTAACTTCTGATTATTGAATATT

mRNA sequence

ATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCGGCATCAATTCCATCAGAATTCCCACCTCTAAACGTTTTCAGAGCAAGACGCGAGGTAAATATGTCGTGCCTATGAAATTGGTAGGGAGACTATTCGCAGCTGAGGATCAAAGTAAAGATATTGAGTCAGTGGAGAGTAAAAACAGCAGCAATCATTTTCAAGCCGTGGCTTTTGTAAATGCCATTTCTGCGACAAGTTTCCTTGCAGTAGACGCAGCAAAGGCTGGAGCTTTAAAGGATATGTGGGAAGGAGCTGCTTCTGTTTATACTGTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAATTATCTGCTCTCAGTTTTACTAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACCAGCCTTTCCCCTTGCACATTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGAGCTTTTGGATCAGGGAAGAGCAGAACAGAGGTTGTTGGAAACTCTGTTGCTTTCTCTTTAGGACTTGCTACGACCCTAGCACTGTTAGGCATAGCTGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCTTTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACTTATTGGAGATAATTGAGTTGCAACTACCCTCATTCTTTGACAATTTTGATCCCCGTTCTGCCGCTGCCAACTTTCCATCAAGTGTGCAAGCATATCTAGCTGGGCTTACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGTTGGCTACGTTGCTTGGATATGTAGCTACATCCAAGGATCCGTTAGTCGGGGGCAGCCTCCTTTTGACATACACAACTGGCTACGTCGTGCCGCTACTTCTTGCAGCTTCATTTGCTGGAGCATTACAGAGCCTTCTGTCATTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGTGCTCTCCTGTTGGGTGGAGGTGTTTATACTTTCTTGGACAGAATGTTTCCAGTCACAATGTCAATGTAA

Coding sequence (CDS)

ATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCGGCATCAATTCCATCAGAATTCCCACCTCTAAACGTTTTCAGAGCAAGACGCGAGGTAAATATGTCGTGCCTATGAAATTGGTAGGGAGACTATTCGCAGCTGAGGATCAAAGTAAAGATATTGAGTCAGTGGAGAGTAAAAACAGCAGCAATCATTTTCAAGCCGTGGCTTTTGTAAATGCCATTTCTGCGACAAGTTTCCTTGCAGTAGACGCAGCAAAGGCTGGAGCTTTAAAGGATATGTGGGAAGGAGCTGCTTCTGTTTATACTGTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAATTATCTGCTCTCAGTTTTACTAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACCAGCCTTTCCCCTTGCACATTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGAGCTTTTGGATCAGGGAAGAGCAGAACAGAGGTTGTTGGAAACTCTGTTGCTTTCTCTTTAGGACTTGCTACGACCCTAGCACTGTTAGGCATAGCTGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCTTTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACTTATTGGAGATAATTGAGTTGCAACTACCCTCATTCTTTGACAATTTTGATCCCCGTTCTGCCGCTGCCAACTTTCCATCAAGTGTGCAAGCATATCTAGCTGGGCTTACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGTTGGCTACGTTGCTTGGATATGTAGCTACATCCAAGGATCCGTTAGTCGGGGGCAGCCTCCTTTTGACATACACAACTGGCTACGTCGTGCCGCTACTTCTTGCAGCTTCATTTGCTGGAGCATTACAGAGCCTTCTGTCATTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGTGCTCTCCTGTTGGGTGGAGGTGTTTATACTTTCTTGGACAGAATGTTTCCAGTCACAATGTCAATGTAA

Protein sequence

MSLLMSHSGGFGINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKNSSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM

Homology

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BLAST of Spg030164.1 vs. NCBI nr
Match: XP_038903027.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Benincasa hispida])

HSP 1 Score: 611.7 bits (1576), Expect = 4.1e-171
Identity = 327/359 (91.09%), Postives = 344/359 (95.82%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRF-QSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKN 60
           MSLLMSHSGGF INS +I +SKR  QS T GKYV+P+K +GR  AA+DQSKDIE VE+KN
Sbjct: 1   MSLLMSHSGGFSINSFKIKSSKRLQQSSTPGKYVMPIKFLGRQSAADDQSKDIELVENKN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAG 120
           SSN+FQA+AFVNAISATSFLAVDAAKA  LK MWEGAA+VYT+ADGGIGDWFGGFLYSAG
Sbjct: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAAAVYTLADGGIGDWFGGFLYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSR EVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLT 300
           FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP++GGSLLLT
Sbjct: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPIIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDR+FPVTM+M
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of Spg030164.1 vs. NCBI nr
Match: XP_022142907.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Momordica charantia])

HSP 1 Score: 609.8 bits (1571), Expect = 1.6e-170
Identity = 324/358 (90.50%), Postives = 342/358 (95.53%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKNS 60
           MSL+MSHSGG GINSI I +SKR  SKTRGK V+PMKL+GR  AAED+SKDIE VE+KNS
Sbjct: 1   MSLVMSHSGGLGINSIIISSSKRLYSKTRGKNVMPMKLLGRQSAAEDRSKDIELVENKNS 60

Query: 61  SNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAGQ 120
           S HFQA+AFVN ISAT+FL V+AAKA  LKDMWEGAASVYT+ADGGIGDWFG FLYSAGQ
Sbjct: 61  SRHFQAMAFVNVISATNFLVVEAAKAETLKDMWEGAASVYTLADGGIGDWFGSFLYSAGQ 120

Query: 121 QANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVGN 180
           QANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+ EVVGN
Sbjct: 121 QANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGN 180

Query: 181 SVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFF 240
           S+AFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF
Sbjct: 181 SLAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFF 240

Query: 241 DNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLTY 300
           DNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP+VGGSLLLTY
Sbjct: 241 DNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPIVGGSLLLTY 300

Query: 301 TTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           TTGYVVPLLLAASFAGALQSLLSFRKFSSWINP+SGALLLGGGVYTFLDR+FPVTM+M
Sbjct: 301 TTGYVVPLLLAASFAGALQSLLSFRKFSSWINPVSGALLLGGGVYTFLDRLFPVTMAM 358

[Close]

BLAST of Spg030164.1 vs. NCBI nr
Match: XP_038903026.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Benincasa hispida])

HSP 1 Score: 604.7 bits (1558), Expect = 5.0e-169
Identity = 327/366 (89.34%), Postives = 344/366 (93.99%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRF-QSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKN 60
           MSLLMSHSGGF INS +I +SKR  QS T GKYV+P+K +GR  AA+DQSKDIE VE+KN
Sbjct: 1   MSLLMSHSGGFSINSFKIKSSKRLQQSSTPGKYVMPIKFLGRQSAADDQSKDIELVENKN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMW-------EGAASVYTVADGGIGDWFG 120
           SSN+FQA+AFVNAISATSFLAVDAAKA  LK MW       EGAA+VYT+ADGGIGDWFG
Sbjct: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWNYFPSSQEGAAAVYTLADGGIGDWFG 120

Query: 121 GFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGK 180
           GFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGK
Sbjct: 121 GFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGK 180

Query: 181 SRTEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEII 240
           SR EVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEII
Sbjct: 181 SRAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEII 240

Query: 241 ELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLV 300
           EL+LPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP++
Sbjct: 241 ELRLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPII 300

Query: 301 GGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMF 359
           GGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDR+F
Sbjct: 301 GGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRLF 360

[Close]

BLAST of Spg030164.1 vs. NCBI nr
Match: XP_022985240.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein [Cucurbita maxima])

HSP 1 Score: 598.6 bits (1542), Expect = 3.6e-167
Identity = 322/359 (89.69%), Postives = 337/359 (93.87%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDI-ESVESKN 60
           M  LM+HSGGFGINSI+I TSKR   +  GKYV P+  +G   AA DQ+KDI E VES N
Sbjct: 1   MGFLMTHSGGFGINSIKISTSKRLLGRPPGKYVAPLNFLGGQSAALDQTKDIDEFVESTN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAG 120
           SSNHF A+AFVNAISATSFLAVDAAKA +L+ MWEGAASVYT+ADGGIGDWFGGFLYSAG
Sbjct: 61  SSNHFHAMAFVNAISATSFLAVDAAKAESLEHMWEGAASVYTLADGGIGDWFGGFLYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSR EVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAF+LGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFALGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLT 300
           FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+VGGSLLLT
Sbjct: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIVGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVY+FLDR+FPVTM+M
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYSFLDRLFPVTMAM 359

[Close]

BLAST of Spg030164.1 vs. NCBI nr
Match: XP_023553444.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597.0 bits (1538), Expect = 1.0e-166
Identity = 320/359 (89.14%), Postives = 337/359 (93.87%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDI-ESVESKN 60
           M  LM+HSGGFGINSI+I TSK    +  GKYV P+K +G   AA+DQ+KDI E VES N
Sbjct: 1   MGFLMTHSGGFGINSIKISTSKPLLGRPPGKYVAPLKFLGGQSAAQDQTKDIDELVESTN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAG 120
           SSNHF A+AFVNA+SATSFLAVDAAKA +L+ MWEGAASVYT+ADGGIGDW GGFLYSAG
Sbjct: 61  SSNHFHAMAFVNAVSATSFLAVDAAKAESLEHMWEGAASVYTLADGGIGDWIGGFLYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSR EVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAF+LGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFALGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLT 300
           FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+VGGSLLLT
Sbjct: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIVGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVY+FLDR+FPVTM+M
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYSFLDRLFPVTMAM 359

[Close]

BLAST of Spg030164.1 vs. ExPASy Swiss-Prot
Match: Q2QY07 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA2 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.0e-120
Identity = 231/283 (81.63%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 73  ISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAGQQANVAVQDQLSA 132
           ++  S +A  AA A  + D   G++ +  +AD  IGDWFG  LYSAGQQAN AVQDQLSA
Sbjct: 77  VAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSA 136

Query: 133 LSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVGNSVAFSLGLATTL 192
           LSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK R+EVVGNSVAFSLGLATTL
Sbjct: 137 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTL 196

Query: 193 ALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRSAAANF 252
           A+LG+AASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF ++DPR+AAAN 
Sbjct: 197 AILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANL 256

Query: 253 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLTYTTGYVVPLLLAA 312
           PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP+VGGSLLLTYTTGYV PLL+AA
Sbjct: 257 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAA 316

Query: 313 SFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVT 356
           SFAGALQSLLSFR++S+WINPISGA LLGGGVYT LDR+FP T
Sbjct: 317 SFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358

[Close]

BLAST of Spg030164.1 vs. ExPASy Swiss-Prot
Match: Q2RAR6 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA1 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.6e-120
Identity = 230/283 (81.27%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 73  ISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAGQQANVAVQDQLSA 132
           ++  S +A  AA A  + D   G++ +  +AD  +GDWFG  LYSAGQQAN AVQDQLSA
Sbjct: 82  VAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSVGDWFGNLLYSAGQQANEAVQDQLSA 141

Query: 133 LSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVGNSVAFSLGLATTL 192
           LSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK R+EVVGNSVAFSLGLATTL
Sbjct: 142 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTL 201

Query: 193 ALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRSAAANF 252
           A+LG+AASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF ++DPR+AAAN 
Sbjct: 202 AILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANL 261

Query: 253 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLTYTTGYVVPLLLAA 312
           PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP+VGGSLLLTYTTGYV PLL+AA
Sbjct: 262 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAA 321

Query: 313 SFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVT 356
           SFAGALQSLLSFR++S+WINPISGA LLGGGVYT LDR+FP T
Sbjct: 322 SFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 363

[Close]

BLAST of Spg030164.1 vs. ExPASy Swiss-Prot
Match: Q9M5P3 (Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana OX=3702 GN=CCDA PE=1 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-118
Identity = 244/355 (68.73%), Postives = 286/355 (80.56%), Query Frame = 0


Query: 8   SGGF--GINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKNSSNHFQ 67
           +GGF  G +S R+   KR+     GK+      + R  +    +  +E +ESK+     +
Sbjct: 10  TGGFVGGFSSCRLNHEKRW--VRAGKHCE----LERERSLVSDAVSLERLESKS----IK 69

Query: 68  AVAFVNAISATSFLAVDAAKAGALK-DMWEGAASVYTVADGGIGDWFGGFLYSAGQQANV 127
                + +   + + + +AKA  LK  + + A S+Y +A+G +GD  G FLYSA QQAN 
Sbjct: 70  LAMLASGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANE 129

Query: 128 AVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVGNSVAF 187
           AVQDQLSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKSR +V+G++VAF
Sbjct: 130 AVQDQLSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAF 189

Query: 188 SLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFD 247
           +LGLATTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIELQLPSFF+NFD
Sbjct: 190 ALGLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFD 249

Query: 248 PRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLTYTTGY 307
           PR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGY
Sbjct: 250 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGY 309

Query: 308 VVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFP-VTMSM 359
           V PL++AASFAGALQSLLS RK S+WINPISGALLLGGG+YTFLDR+FP  TM M
Sbjct: 310 VAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of Spg030164.1 vs. ExPASy Swiss-Prot
Match: P51364 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=2787 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.0e-23
Identity = 69/232 (29.74%), Postives = 124/232 (53.45%), Query Frame = 0


Query: 115 LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSR 174
           LY++    N     QL+ ++  S + +F +G  TS SPC +S+LP+ + YI   G   S+
Sbjct: 7   LYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLSQ 66

Query: 175 TEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL 234
            + + N   F LG  ++   LG+ A+   K Y Q+  G+P+ ++ + + MG +LL I+ L
Sbjct: 67  IDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIVPL 126

Query: 235 QLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGG 294
                 +N + R    N   +++ YL+G+   LA S CSTP+  TLL +V ++ +  +G 
Sbjct: 127 ST----NNLNTRINNTN--QNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIGL 186

Query: 295 SLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYT 347
             +L Y+ GY+ P+++ + F+    +  S    ++   P SG +LL  G ++
Sbjct: 187 IFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFS 232

[Close]

BLAST of Spg030164.1 vs. ExPASy Swiss-Prot
Match: Q1XDC3 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=2788 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.1e-20
Identity = 65/208 (31.25%), Postives = 107/208 (51.44%), Query Frame = 0


Query: 114 FLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 173
           F+Y++    N     QL+ L+ TS + IF +G  TSLSPC +S+LP+ + YI       +
Sbjct: 6   FVYNSQHFVNNITLYQLNHLNSTSFSFIFLSGLFTSLSPCIISILPVCILYIAGETQKLN 65

Query: 174 RTEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 233
                 N   F LG  ++   LGI A+   K Y Q   G+P  ++ + + MGLNLL I+ 
Sbjct: 66  PINKTKNLFLFCLGTISSFITLGILATLITKTYSQFFNGIPTISAVVIIYMGLNLLNIVH 125

Query: 234 LQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVG 293
           +  P F           N   + + YL+G+   +A S CSTP+  TLL ++ +++    G
Sbjct: 126 INSPKF------NGLVTNNNYNFKMYLSGVGIGIAISSCSTPIFVTLLVWINSTQKIFTG 185

Query: 294 GSLLLTYTTGYVVPLLLAASFAGALQSL 322
              +L Y+ GY+ P+++ + F+ +   L
Sbjct: 186 LIFILIYSIGYIFPIIIGSIFSTSFLKL 207

[Close]

BLAST of Spg030164.1 vs. ExPASy TrEMBL
Match: A0A6J1CP79 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012907 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 7.5e-171
Identity = 324/358 (90.50%), Postives = 342/358 (95.53%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKNS 60
           MSL+MSHSGG GINSI I +SKR  SKTRGK V+PMKL+GR  AAED+SKDIE VE+KNS
Sbjct: 1   MSLVMSHSGGLGINSIIISSSKRLYSKTRGKNVMPMKLLGRQSAAEDRSKDIELVENKNS 60

Query: 61  SNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAGQ 120
           S HFQA+AFVN ISAT+FL V+AAKA  LKDMWEGAASVYT+ADGGIGDWFG FLYSAGQ
Sbjct: 61  SRHFQAMAFVNVISATNFLVVEAAKAETLKDMWEGAASVYTLADGGIGDWFGSFLYSAGQ 120

Query: 121 QANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVGN 180
           QANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+ EVVGN
Sbjct: 121 QANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGN 180

Query: 181 SVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFF 240
           S+AFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF
Sbjct: 181 SLAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFF 240

Query: 241 DNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLTY 300
           DNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP+VGGSLLLTY
Sbjct: 241 DNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPIVGGSLLLTY 300

Query: 301 TTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           TTGYVVPLLLAASFAGALQSLLSFRKFSSWINP+SGALLLGGGVYTFLDR+FPVTM+M
Sbjct: 301 TTGYVVPLLLAASFAGALQSLLSFRKFSSWINPVSGALLLGGGVYTFLDRLFPVTMAM 358

[Close]

BLAST of Spg030164.1 vs. ExPASy TrEMBL
Match: A0A6J1JAT1 (cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima OX=3661 GN=LOC111483292 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.7e-167
Identity = 322/359 (89.69%), Postives = 337/359 (93.87%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDI-ESVESKN 60
           M  LM+HSGGFGINSI+I TSKR   +  GKYV P+  +G   AA DQ+KDI E VES N
Sbjct: 1   MGFLMTHSGGFGINSIKISTSKRLLGRPPGKYVAPLNFLGGQSAALDQTKDIDEFVESTN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAG 120
           SSNHF A+AFVNAISATSFLAVDAAKA +L+ MWEGAASVYT+ADGGIGDWFGGFLYSAG
Sbjct: 61  SSNHFHAMAFVNAISATSFLAVDAAKAESLEHMWEGAASVYTLADGGIGDWFGGFLYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSR EVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAF+LGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFALGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLT 300
           FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+VGGSLLLT
Sbjct: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIVGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVY+FLDR+FPVTM+M
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYSFLDRLFPVTMAM 359

[Close]

BLAST of Spg030164.1 vs. ExPASy TrEMBL
Match: A0A6J1ENE1 (cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita moschata OX=3662 GN=LOC111436074 PE=3 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.9e-166
Identity = 320/359 (89.14%), Postives = 336/359 (93.59%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDI-ESVESKN 60
           M  LM+HSGGFGINS +I TSK    +  GKYV P+KL+G   AA+ Q+KDI E VES N
Sbjct: 1   MGFLMTHSGGFGINSFKISTSKPLLGRPPGKYVAPLKLLGGQSAAQGQTKDIDELVESTN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAG 120
           SSNHF A+AFVNAISATSFLAVDAAKA +L+ MWEGAA VYT+ADGGIGDWFGGFLYSAG
Sbjct: 61  SSNHFHAMAFVNAISATSFLAVDAAKAESLQHMWEGAAPVYTLADGGIGDWFGGFLYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSR EVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAF+LGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFALGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLT 300
           FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+VGGSLLLT
Sbjct: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIVGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVY+FLDR+FPVTM+M
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYSFLDRLFPVTMAM 359

[Close]

BLAST of Spg030164.1 vs. ExPASy TrEMBL
Match: A0A5D3BU70 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00980 PE=3 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 5.6e-166
Identity = 319/359 (88.86%), Postives = 338/359 (94.15%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRF-QSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKN 60
           MS+LMS+SGGF INSI+I TSKR     T GKYV+P+K +GR  AA+DQ KDIE VE++N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAG 120
           S N+FQA+AFVNAISATSFLAVDAAKA  LK MWEGAASVYT+ADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+ EVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP++GGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GGVYTFLDR+FPVTM+M
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of Spg030164.1 vs. ExPASy TrEMBL
Match: A0A1S3BSW3 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493358 PE=3 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.6e-165
Identity = 318/359 (88.58%), Postives = 338/359 (94.15%), Query Frame = 0


Query: 1   MSLLMSHSGGFGINSIRIPTSKRF-QSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKN 60
           MS+LMS+SGGF INSI+I TSKR     T GKYV+P+K +GR  AA+DQ +DIE VE++N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCEDIELVENRN 60

Query: 61  SSNHFQAVAFVNAISATSFLAVDAAKAGALKDMWEGAASVYTVADGGIGDWFGGFLYSAG 120
           S N+FQA+AFVNAISATSFLAVDAAKA  LK MWEGAASVYT+ADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+ EVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP++GGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFPVTMSM 359
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GGVYTFLDR+FPVTM+M
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of Spg030164.1 vs. TAIR 10
Match: AT5G54290.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 427.6 bits (1098), Expect = 1.0e-119
Identity = 244/355 (68.73%), Postives = 286/355 (80.56%), Query Frame = 0


Query: 8   SGGF--GINSIRIPTSKRFQSKTRGKYVVPMKLVGRLFAAEDQSKDIESVESKNSSNHFQ 67
           +GGF  G +S R+   KR+     GK+      + R  +    +  +E +ESK+     +
Sbjct: 10  TGGFVGGFSSCRLNHEKRW--VRAGKHCE----LERERSLVSDAVSLERLESKS----IK 69

Query: 68  AVAFVNAISATSFLAVDAAKAGALK-DMWEGAASVYTVADGGIGDWFGGFLYSAGQQANV 127
                + +   + + + +AKA  LK  + + A S+Y +A+G +GD  G FLYSA QQAN 
Sbjct: 70  LAMLASGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANE 129

Query: 128 AVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVVGNSVAF 187
           AVQDQLSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKSR +V+G++VAF
Sbjct: 130 AVQDQLSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAF 189

Query: 188 SLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFD 247
           +LGLATTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIELQLPSFF+NFD
Sbjct: 190 ALGLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFD 249

Query: 248 PRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLVGGSLLLTYTTGY 307
           PR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGY
Sbjct: 250 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGY 309

Query: 308 VVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRMFP-VTMSM 359
           V PL++AASFAGALQSLLS RK S+WINPISGALLLGGG+YTFLDR+FP  TM M
Sbjct: 310 VAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of Spg030164.1 vs. TAIR 10
Match: AT5G54290.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 426.4 bits (1095), Expect = 2.3e-119
Identity = 233/309 (75.40%), Postives = 267/309 (86.41%), Query Frame = 0


Query: 52  IESVESKNSSNHFQAVAFVNAISATSFLAVDAAKAGALK-DMWEGAASVYTVADGGIGDW 111
           +E +ESK+     +     + +   + + + +AKA  LK  + + A S+Y +A+G +GD 
Sbjct: 51  LERLESKS----IKLAMLASGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDS 110

Query: 112 FGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGS 171
            G FLYSA QQAN AVQDQLSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGS
Sbjct: 111 VGNFLYSANQQANEAVQDQLSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS 170

Query: 172 GKSRTEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLE 231
           GKSR +V+G++VAF+LGLATTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLE
Sbjct: 171 GKSRGQVIGDTVAFALGLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLE 230

Query: 232 IIELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP 291
           IIELQLPSFF+NFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP
Sbjct: 231 IIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDP 290

Query: 292 LVGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDR 351
           ++GGSLLLTYTTGYV PL++AASFAGALQSLLS RK S+WINPISGALLLGGG+YTFLDR
Sbjct: 291 VIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDR 350

Query: 352 MFP-VTMSM 359
           +FP  TM M
Sbjct: 351 LFPAATMVM 355

The following BLAST results are available for this feature:

BLAST of Spg030164.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903027.1	4.1e-171	91.09	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Beninca...	[more]
XP_022142907.1	1.6e-170	90.50	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Momordi...	[more]
XP_038903026.1	5.0e-169	89.34	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Beninca...	[more]
XP_022985240.1	3.6e-167	89.69	cytochrome c-type biogenesis ccda-like chloroplastic protein [Cucurbita maxima]	[more]
XP_023553444.1	1.0e-166	89.14	cytochrome c-type biogenesis ccda-like chloroplastic protein [Cucurbita pepo sub...	[more]

BLAST of Spg030164.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QY07	2.0e-120	81.63	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa s...	[more]
Q2RAR6	2.6e-120	81.27	Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa s...	[more]
Q9M5P3	1.4e-118	68.73	Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thal...	[more]
P51364	1.0e-23	29.74	Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=...	[more]
Q1XDC3	3.1e-20	31.25	Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=...	[more]

BLAST of Spg030164.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CP79	7.5e-171	90.50	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Momor...	[more]
A0A6J1JAT1	1.7e-167	89.69	cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima...	[more]
A0A6J1ENE1	1.9e-166	89.14	cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita moscha...	[more]
A0A5D3BU70	5.6e-166	88.86	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A1S3BSW3	1.6e-165	88.58	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]

BLAST of Spg030164.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54290.1	1.0e-119	68.73	cytochrome c biogenesis protein family	[more]
AT5G54290.2	2.3e-119	75.40	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003834	Cytochrome C biogenesis protein, transmembrane domain	PFAM	PF02683	DsbD	coord: 141..348 e-value: 5.2E-45 score: 154.0
None	No IPR available	PANTHER	PTHR31272	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	coord: 56..358
None	No IPR available	PANTHER	PTHR31272:SF6	CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN	coord: 56..358

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg030164	Spg030164	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg030164.1-three_prime_utr	Spg030164.1-three_prime_utr-scaffold6:14782023..14782489	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14782490..14782562	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14782646..14782692	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14782867..14782959	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14783385..14783485	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14783565..14783637	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14784096..14784257	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14785089..14785120	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14785207..14785292	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14785408..14785538	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14786045..14786100	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14786698..14786832	CDS
Spg030164.1-cds	Spg030164.1-cds-scaffold6:14787207..14787294	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg030164.1-five_prime_utr	Spg030164.1-five_prime_utr-scaffold6:14787295..14787567	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg030164.1	Spg030164.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0016020	membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane