Spg026733.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAACACGAGCAAGGAAAGAAAGAGAAAGTGAGGAGGAGGAGGTGCCCGTTACCCCTGAAGTTCAGAAAGCTAAAACCAAGAAGAAGAAAACGCCAGAAGAGAAAGAAGCTAAACGGAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAGGCTATCCAAGAAGGACCAGTGAATGACCCAGATACGGAAAGAATTCAGAATCCTGAGGTAGAAACGATAGTCCAAGATTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAAGCTGAAGAAGTTCGAGACGAACAGGCTGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCATCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGGTGATTCGGACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAAAGAGAGAAAAAAAAAAGCTGAGGAAAAAGTGCGAGAAGAAGCAAAGAGGGCTGAGGAAGAGATTTTGCGCAAGCGAAGAGAAGACAAGGGCAAAGGTATTGCCAAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAGCGAGGATTTGGAAATGAGTTGCCACGGTTCTTGAGGACTAGAATAGGAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTGAATTCCAACTTTGTTCGGGAATTTTACGCGAATCTTGACCATAAGGAAGAATTTCAGGTTATAGTTCGAGGAGTCTCAGTGGATTAGAGCCCAGAAGCTGTTAATGAATTGTTTGATCTCCAGGATTTTCCGCATGCAGTCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTACGGCTGTCCGAGAGGTTGGCATTGAGGGGGCCCAATGGAGGTTGTCGCAGACGCGGAAGCGCACATTTCATGCAGCTTATTTGAAAAGCGAGGCCAACACCTAGATGGGTTTTATTAAGTTGCGCTTACTACCAACTACGCATGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCTATTCTTCGTTCAATGAGTATTGATGTAGGAAAAATAATTTCGTCTGAGATTCTTGACTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATATGATATTACCAGATAAGGGAATAATTGATACGCCAAATTTGGCTAGGCTTCAGAGAACGCAGGAAGCACGCCAAGGGGGTTTGGTGTGCGACATCCAACAAATTCAGGAACTGTTGCAACTGCATTCCAGCAGAATGGAATTCGCTGAAAGGCAGTTTCAGACTTTCTGGGACTATGTAAAGAGAAGGGATGCCGCCTTAAGGGTGGCCTTGCAATCAAATTTTTCCGAACCATACCCGGCCTTACCCGTATTCCCTGAGGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGATGATGAAGAGCAGGGTCAGGAAGATTGA ATGGAAAAAACACGAGCAAGGAAAGAAAGAGAAAGTGAGGAGGAGGAGGTGCCCGTTACCCCTGAAGTTCAGAAAGCTAAAACCAAGAAGAAGAAAACGCCAGAAGAGAAAGAAGCTAAACGGAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAGGCTATCCAAGAAGGACCAGTGAATGACCCAGATACGGAAAGAATTCAGAATCCTGAGGTAGAAACGATAGTCCAAGATTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAAGCTGAAGAAGTTCGAGACGAACAGGCTGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCATCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGAGCGAGAGGAAAGAGAGAAAAAAAAAAGCTGAGGAAAAAGTGCGAGAAGAAGCAAAGAGGGCTGAGGAAGAGATTTTGCGCAAGCGAAGAGAAGACAAGGGCAAAGGTATTGCCAAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAGCGAGGATTTGGAAATGAGTTGCCACGGTTCTTGAGGACTAGAATAGGAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTGAATTCCAACTTTGTTCGGGAATTTTACGCGAATCTTGACCATAAGGAAGAATTTCAGGATTTTCCGCATGCAGTCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTACGGCTGTCCGAGAGATGGGTTTTATTAAGTTGCGCTTACTACCAACTACGCATGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCTATTCTTCGTTCAATGAGTATTGATGTAGGAAAAATAATTTCGTCTGAGATTCTTGACTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATATGATATTACCAGATAAGGGAATAATTGATACGCCAAATTTGGCTAGGCTTCAGAGAACGCAGGAAGCACGCCAAGGGGGTTTGGTGTGCGACATCCAACAAATTCAGGAACTGTTGCAACTGCATTCCAGCAGAATGGAATTCGCTGAAAGGCAGTTTCAGACTTTCTGGGACTATGTAAAGAGAAGGGATGCCGCCTTAAGGGTGGCCTTGCAATCAAATTTTTCCGAACCATACCCGGCCTTACCCGTATTCCCTGAGGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGATGATGAAGAGCAGGGTCAGGAAGATTGA ATGGAAAAAACACGAGCAAGGAAAGAAAGAGAAAGTGAGGAGGAGGAGGTGCCCGTTACCCCTGAAGTTCAGAAAGCTAAAACCAAGAAGAAGAAAACGCCAGAAGAGAAAGAAGCTAAACGGAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAGGCTATCCAAGAAGGACCAGTGAATGACCCAGATACGGAAAGAATTCAGAATCCTGAGGTAGAAACGATAGTCCAAGATTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAAGCTGAAGAAGTTCGAGACGAACAGGCTGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCATCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGAGCGAGAGGAAAGAGAGAAAAAAAAAAGCTGAGGAAAAAGTGCGAGAAGAAGCAAAGAGGGCTGAGGAAGAGATTTTGCGCAAGCGAAGAGAAGACAAGGGCAAAGGTATTGCCAAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAGCGAGGATTTGGAAATGAGTTGCCACGGTTCTTGAGGACTAGAATAGGAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTGAATTCCAACTTTGTTCGGGAATTTTACGCGAATCTTGACCATAAGGAAGAATTTCAGGATTTTCCGCATGCAGTCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTACGGCTGTCCGAGAGATGGGTTTTATTAAGTTGCGCTTACTACCAACTACGCATGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCTATTCTTCGTTCAATGAGTATTGATGTAGGAAAAATAATTTCGTCTGAGATTCTTGACTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATATGATATTACCAGATAAGGGAATAATTGATACGCCAAATTTGGCTAGGCTTCAGAGAACGCAGGAAGCACGCCAAGGGGGTTTGGTGTGCGACATCCAACAAATTCAGGAACTGTTGCAACTGCATTCCAGCAGAATGGAATTCGCTGAAAGGCAGTTTCAGACTTTCTGGGACTATGTAAAGAGAAGGGATGCCGCCTTAAGGGTGGCCTTGCAATCAAATTTTTCCGAACCATACCCGGCCTTACCCGTATTCCCTGAGGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGATGATGAAGAGCAGGGTCAGGAAGATTGA MEKTRARKERESEEEEVPVTPEVQKAKTKKKKTPEEKEAKRRRRQQRAAEQEAIQEGPVNDPDTERIQNPEVETIVQDSVQKENVEKNQETQAEEVRDEQAAVVPEEGDEQETVQEAHVEVIMPEPPKHRRIKRKAGRVQSERKERKKKAEEKVREEAKRAEEEILRKRREDKGKGIAKASGAADEVEAQGLPFIRFVNNLARAKYQEMLKRDFLFERGFGNELPRFLRTRIGNLGWSQFCAKPEPVNSNFVREFYANLDHKEEFQDFPHAVFNEMVVAPSNDQLSTAVREMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGIIDTPNLARLQRTQEARQGGLVCDIQQIQELLQLHSSRMEFAERQFQTFWDYVKRRDAALRVALQSNFSEPYPALPVFPEDLLNPWIPPPPVEREEDDEEQGQED Homology
BLAST of Spg026733.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 134.0 bits (336), Expect = 3.3e-27 Identity = 111/368 (30.16%), Postives = 164/368 (44.57%), Query Frame = 0
BLAST of Spg026733.1 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii]) HSP 1 Score: 119.4 bits (298), Expect = 8.5e-23 Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 0
BLAST of Spg026733.1 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 117.1 bits (292), Expect = 4.2e-22 Identity = 75/199 (37.69%), Postives = 104/199 (52.26%), Query Frame = 0
BLAST of Spg026733.1 vs. NCBI nr
Match: KAE8718449.1 (hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]) HSP 1 Score: 99.0 bits (245), Expect = 1.2e-16 Identity = 90/348 (25.86%), Postives = 141/348 (40.52%), Query Frame = 0
BLAST of Spg026733.1 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 99.0 bits (245), Expect = 1.2e-16 Identity = 81/254 (31.89%), Postives = 112/254 (44.09%), Query Frame = 0
BLAST of Spg026733.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.6e-27 Identity = 111/368 (30.16%), Postives = 164/368 (44.57%), Query Frame = 0
BLAST of Spg026733.1 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.1e-23 Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 0
BLAST of Spg026733.1 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-22 Identity = 75/199 (37.69%), Postives = 104/199 (52.26%), Query Frame = 0
BLAST of Spg026733.1 vs. ExPASy TrEMBL
Match: A0A6A3BU96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00240 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.8e-17 Identity = 90/348 (25.86%), Postives = 141/348 (40.52%), Query Frame = 0
BLAST of Spg026733.1 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.2e-16 Identity = 89/337 (26.41%), Postives = 140/337 (41.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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