Spg026733 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg026733
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold6: 18945259 .. 18946912 (+)
RNA-Seq ExpressionSpg026733
SyntenySpg026733
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAACACGAGCAAGGAAAGAAAGAGAAAGTGAGGAGGAGGAGGTGCCCGTTACCCCTGAAGTTCAGAAAGCTAAAACCAAGAAGAAGAAAACGCCAGAAGAGAAAGAAGCTAAACGGAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAGGCTATCCAAGAAGGACCAGTGAATGACCCAGATACGGAAAGAATTCAGAATCCTGAGGTAGAAACGATAGTCCAAGATTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAAGCTGAAGAAGTTCGAGACGAACAGGCTGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCATCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGGTGATTCGGACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAAAGAGAGAAAAAAAAAAGCTGAGGAAAAAGTGCGAGAAGAAGCAAAGAGGGCTGAGGAAGAGATTTTGCGCAAGCGAAGAGAAGACAAGGGCAAAGGTATTGCCAAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAGCGAGGATTTGGAAATGAGTTGCCACGGTTCTTGAGGACTAGAATAGGAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTGAATTCCAACTTTGTTCGGGAATTTTACGCGAATCTTGACCATAAGGAAGAATTTCAGGTTATAGTTCGAGGAGTCTCAGTGGATTAGAGCCCAGAAGCTGTTAATGAATTGTTTGATCTCCAGGATTTTCCGCATGCAGTCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTACGGCTGTCCGAGAGGTTGGCATTGAGGGGGCCCAATGGAGGTTGTCGCAGACGCGGAAGCGCACATTTCATGCAGCTTATTTGAAAAGCGAGGCCAACACCTAGATGGGTTTTATTAAGTTGCGCTTACTACCAACTACGCATGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCTATTCTTCGTTCAATGAGTATTGATGTAGGAAAAATAATTTCGTCTGAGATTCTTGACTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATATGATATTACCAGATAAGGGAATAATTGATACGCCAAATTTGGCTAGGCTTCAGAGAACGCAGGAAGCACGCCAAGGGGGTTTGGTGTGCGACATCCAACAAATTCAGGAACTGTTGCAACTGCATTCCAGCAGAATGGAATTCGCTGAAAGGCAGTTTCAGACTTTCTGGGACTATGTAAAGAGAAGGGATGCCGCCTTAAGGGTGGCCTTGCAATCAAATTTTTCCGAACCATACCCGGCCTTACCCGTATTCCCTGAGGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGATGATGAAGAGCAGGGTCAGGAAGATTGA

mRNA sequence

ATGGAAAAAACACGAGCAAGGAAAGAAAGAGAAAGTGAGGAGGAGGAGGTGCCCGTTACCCCTGAAGTTCAGAAAGCTAAAACCAAGAAGAAGAAAACGCCAGAAGAGAAAGAAGCTAAACGGAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAGGCTATCCAAGAAGGACCAGTGAATGACCCAGATACGGAAAGAATTCAGAATCCTGAGGTAGAAACGATAGTCCAAGATTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAAGCTGAAGAAGTTCGAGACGAACAGGCTGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCATCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGAGCGAGAGGAAAGAGAGAAAAAAAAAAGCTGAGGAAAAAGTGCGAGAAGAAGCAAAGAGGGCTGAGGAAGAGATTTTGCGCAAGCGAAGAGAAGACAAGGGCAAAGGTATTGCCAAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAGCGAGGATTTGGAAATGAGTTGCCACGGTTCTTGAGGACTAGAATAGGAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTGAATTCCAACTTTGTTCGGGAATTTTACGCGAATCTTGACCATAAGGAAGAATTTCAGGATTTTCCGCATGCAGTCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTACGGCTGTCCGAGAGATGGGTTTTATTAAGTTGCGCTTACTACCAACTACGCATGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCTATTCTTCGTTCAATGAGTATTGATGTAGGAAAAATAATTTCGTCTGAGATTCTTGACTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATATGATATTACCAGATAAGGGAATAATTGATACGCCAAATTTGGCTAGGCTTCAGAGAACGCAGGAAGCACGCCAAGGGGGTTTGGTGTGCGACATCCAACAAATTCAGGAACTGTTGCAACTGCATTCCAGCAGAATGGAATTCGCTGAAAGGCAGTTTCAGACTTTCTGGGACTATGTAAAGAGAAGGGATGCCGCCTTAAGGGTGGCCTTGCAATCAAATTTTTCCGAACCATACCCGGCCTTACCCGTATTCCCTGAGGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGATGATGAAGAGCAGGGTCAGGAAGATTGA

Coding sequence (CDS)

ATGGAAAAAACACGAGCAAGGAAAGAAAGAGAAAGTGAGGAGGAGGAGGTGCCCGTTACCCCTGAAGTTCAGAAAGCTAAAACCAAGAAGAAGAAAACGCCAGAAGAGAAAGAAGCTAAACGGAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAGGCTATCCAAGAAGGACCAGTGAATGACCCAGATACGGAAAGAATTCAGAATCCTGAGGTAGAAACGATAGTCCAAGATTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAAGCTGAAGAAGTTCGAGACGAACAGGCTGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCATCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGAGCGAGAGGAAAGAGAGAAAAAAAAAAGCTGAGGAAAAAGTGCGAGAAGAAGCAAAGAGGGCTGAGGAAGAGATTTTGCGCAAGCGAAGAGAAGACAAGGGCAAAGGTATTGCCAAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAGCGAGGATTTGGAAATGAGTTGCCACGGTTCTTGAGGACTAGAATAGGAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTGAATTCCAACTTTGTTCGGGAATTTTACGCGAATCTTGACCATAAGGAAGAATTTCAGGATTTTCCGCATGCAGTCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTACGGCTGTCCGAGAGATGGGTTTTATTAAGTTGCGCTTACTACCAACTACGCATGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCTATTCTTCGTTCAATGAGTATTGATGTAGGAAAAATAATTTCGTCTGAGATTCTTGACTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATATGATATTACCAGATAAGGGAATAATTGATACGCCAAATTTGGCTAGGCTTCAGAGAACGCAGGAAGCACGCCAAGGGGGTTTGGTGTGCGACATCCAACAAATTCAGGAACTGTTGCAACTGCATTCCAGCAGAATGGAATTCGCTGAAAGGCAGTTTCAGACTTTCTGGGACTATGTAAAGAGAAGGGATGCCGCCTTAAGGGTGGCCTTGCAATCAAATTTTTCCGAACCATACCCGGCCTTACCCGTATTCCCTGAGGACCTACTGAACCCCTGGATCCCACCCCCACCTGTTGAACGAGAGGAAGATGATGAAGAGCAGGGTCAGGAAGATTGA

Protein sequence

MEKTRARKERESEEEEVPVTPEVQKAKTKKKKTPEEKEAKRRRRQQRAAEQEAIQEGPVNDPDTERIQNPEVETIVQDSVQKENVEKNQETQAEEVRDEQAAVVPEEGDEQETVQEAHVEVIMPEPPKHRRIKRKAGRVQSERKERKKKAEEKVREEAKRAEEEILRKRREDKGKGIAKASGAADEVEAQGLPFIRFVNNLARAKYQEMLKRDFLFERGFGNELPRFLRTRIGNLGWSQFCAKPEPVNSNFVREFYANLDHKEEFQDFPHAVFNEMVVAPSNDQLSTAVREMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGIIDTPNLARLQRTQEARQGGLVCDIQQIQELLQLHSSRMEFAERQFQTFWDYVKRRDAALRVALQSNFSEPYPALPVFPEDLLNPWIPPPPVEREEDDEEQGQED
Homology
BLAST of Spg026733 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 134.0 bits (336), Expect = 3.3e-27
Identity = 111/368 (30.16%), Postives = 164/368 (44.57%), Query Frame = 0

Query: 195 IRFVNNLARAKYQEMLK-RDFLFERGF-------GNELPRFLRTRIGNLGWSQFCAKPEP 254
           ++F    A  +Y+  ++ R    E+GF         +LP F+   I    W QFCA PE 
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 82

Query: 255 VNSNFVREFYANLDHKEE------------FQDFPHAVF---------NEMVVAPSNDQL 314
                VREFYANL   EE             ++  +AVF         +E +   +   L
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDL 142

Query: 315 STAVREMG------------------------------FIKLRLLPTTHDSTVSRDRVLL 374
            T +  +                               F+K RLLPTTH  TVS+DR+LL
Sbjct: 143 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLL 202

Query: 375 AFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGI 434
             ++L   SI+VG++I SEI  C  +K G LFFP+ IT LCR A  P   ++  L + G 
Sbjct: 203 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 262

Query: 435 IDTPNLARLQR---TQEARQ---------------GGLVCDIQQI------QELLQLH-S 479
           ID   +AR+ +   T+  +Q               G ++  ++ +      QE+ Q H  
Sbjct: 263 IDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMM 322

BLAST of Spg026733 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 119.4 bits (298), Expect = 8.5e-23
Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 0

Query: 294 FIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTIT 353
           F+K RLLPTTH  TVS+DR+LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT
Sbjct: 51  FLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLIT 110

Query: 354 MLCRRAGVPESEDDMILPDKGIIDTPNLARLQRTQEAR--------------------QG 413
            LCR A  P   ++  L   G ID   +AR+  TQE +                     G
Sbjct: 111 QLCRNARAPFLVNEEKLHITGEIDAIAVARI--TQEGQTELTQQPSTSRPTVASSSRANG 170

Query: 414 GLVCDIQQI------QELLQLH-SSRMEFAERQFQTFWDYVKRRDAALRVALQSNFSEPY 473
            ++  ++ +      QE+ Q H  S ++   +Q Q FW Y K RD AL+ ALQ+NF+ P 
Sbjct: 171 DILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPI 230

Query: 474 PALPVFPEDLLNPWIPPPPVEREEDDEEQGQE 479
           P  P FP++LL         E ++D   +  E
Sbjct: 231 PTFPTFPQELLQDLDYEYEAESDKDGSNEAAE 260

BLAST of Spg026733 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 117.1 bits (292), Expect = 4.2e-22
Identity = 75/199 (37.69%), Postives = 104/199 (52.26%), Query Frame = 0

Query: 294 FIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTIT 353
           F+K RLLPTTH   VS+DR+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT
Sbjct: 110 FLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLIT 169

Query: 354 MLCRRAGVPESEDDMILPDKGIIDTPNLARL--------------QRTQEARQGGLVCDI 413
            LCR A    +E+   L + G ID   +AR+               R   A       D+
Sbjct: 170 RLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDV 229

Query: 414 QQIQELLQLHSSRMEFAERQFQTFWDYVKRRDAALRVALQSNFSEPYPALPVFPEDLLNP 473
            Q  + L+   S+ E   +Q Q FW Y K RD AL+ ALQ+NF+ P P  P FP+++L  
Sbjct: 230 LQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD 289

Query: 474 WIPPPPVEREEDDEEQGQE 479
                  E ++D   +  E
Sbjct: 290 LDYEYEAESDKDGSNEAAE 306

BLAST of Spg026733 vs. NCBI nr
Match: KAE8718449.1 (hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus])

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-16
Identity = 90/348 (25.86%), Postives = 141/348 (40.52%), Query Frame = 0

Query: 196 RFVNNLARAKYQEMLKRDFLFERGF-------GNELPRFLRTRIGNLGWSQFCAKPEPVN 255
           +F N+ A+A++Q    R+  FE GF       G   P  +   +  L W +F   P  VN
Sbjct: 16  QFENDEAKARFQNFKNRELFFELGFIFTEETDGGFGPDVMDI-VMPLKWPKFAHHPGSVN 75

Query: 256 SNFVREFYANLD-------------------------HKEEFQDFPHAVFNEMVVAPSND 315
           ++ V+EFYAN+                          H +E  D  HA+F E   +   D
Sbjct: 76  ASLVKEFYANISKPNQHSIFVRGKQIRFTSIAINRYFHLQEVVD-GHAMFEEEADSNKYD 135

Query: 316 QL------------------STAVREM---------GFIKLRLLPTTHDSTVSRDRVLLA 375
            +                   +  RE           F+K +L+PT+H++TVS  R+LL 
Sbjct: 136 GVLEDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLL 195

Query: 376 FAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGII 435
            +++ S  IDVG+II  ++ DC  KK   L FPN IT LCR+  V E+  D ILP    I
Sbjct: 196 HSMIVSRPIDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEILPGLSGI 255

Query: 436 DTPNLARL-------------QRTQEARQGGLVCDIQQIQELLQLHSSRMEFAERQFQTF 472
               L  L             +++    +      +  ++E +    +++       + F
Sbjct: 256 TRDRLPLLLGLENPKSKDPVHEQSVGTTESNAEVRLLALEEAVTQTQAQLHALHGDIRNF 315

BLAST of Spg026733 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-16
Identity = 81/254 (31.89%), Postives = 112/254 (44.09%), Query Frame = 0

Query: 195 IRFVNNLARAKYQEMLK-RDFLFERGF-------GNELPRFLRTRIGNLGWSQFCAKPEP 254
           ++F    A  +Y+  ++ R    E+GF         +LP F+   I    W QFCA PE 
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 73

Query: 255 VNSNFVREFYANL---------------------------------DHKEEFQDFPH--- 314
                VREFYANL                                 +H E  ++      
Sbjct: 74  PIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDL 133

Query: 315 -AVFNEMVVAPSNDQLS-----TAVRE---------MGFIKLRLLPTTHDSTVSRDRVLL 374
             V   + VA +   +S     T +R            F+K  LLPTTH  TVS+DR+LL
Sbjct: 134 ITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLL 193

Query: 375 AFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGI 390
             ++L   SI+VG++I SEI  C  +K G LFFP+ IT LCR A  P   ++  L + G 
Sbjct: 194 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 253

BLAST of Spg026733 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-27
Identity = 111/368 (30.16%), Postives = 164/368 (44.57%), Query Frame = 0

Query: 195 IRFVNNLARAKYQEMLK-RDFLFERGF-------GNELPRFLRTRIGNLGWSQFCAKPEP 254
           ++F    A  +Y+  ++ R    E+GF         +LP F+   I    W QFCA PE 
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 82

Query: 255 VNSNFVREFYANLDHKEE------------FQDFPHAVF---------NEMVVAPSNDQL 314
                VREFYANL   EE             ++  +AVF         +E +   +   L
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDL 142

Query: 315 STAVREMG------------------------------FIKLRLLPTTHDSTVSRDRVLL 374
            T +  +                               F+K RLLPTTH  TVS+DR+LL
Sbjct: 143 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLL 202

Query: 375 AFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGI 434
             ++L   SI+VG++I SEI  C  +K G LFFP+ IT LCR A  P   ++  L + G 
Sbjct: 203 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 262

Query: 435 IDTPNLARLQR---TQEARQ---------------GGLVCDIQQI------QELLQLH-S 479
           ID   +AR+ +   T+  +Q               G ++  ++ +      QE+ Q H  
Sbjct: 263 IDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMM 322

BLAST of Spg026733 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-23
Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 0

Query: 294 FIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTIT 353
           F+K RLLPTTH  TVS+DR+LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT
Sbjct: 51  FLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLIT 110

Query: 354 MLCRRAGVPESEDDMILPDKGIIDTPNLARLQRTQEAR--------------------QG 413
            LCR A  P   ++  L   G ID   +AR+  TQE +                     G
Sbjct: 111 QLCRNARAPFLVNEEKLHITGEIDAIAVARI--TQEGQTELTQQPSTSRPTVASSSRANG 170

Query: 414 GLVCDIQQI------QELLQLH-SSRMEFAERQFQTFWDYVKRRDAALRVALQSNFSEPY 473
            ++  ++ +      QE+ Q H  S ++   +Q Q FW Y K RD AL+ ALQ+NF+ P 
Sbjct: 171 DILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPI 230

Query: 474 PALPVFPEDLLNPWIPPPPVEREEDDEEQGQE 479
           P  P FP++LL         E ++D   +  E
Sbjct: 231 PTFPTFPQELLQDLDYEYEAESDKDGSNEAAE 260

BLAST of Spg026733 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-22
Identity = 75/199 (37.69%), Postives = 104/199 (52.26%), Query Frame = 0

Query: 294 FIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTIT 353
           F+K RLLPTTH   VS+DR+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT
Sbjct: 110 FLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLIT 169

Query: 354 MLCRRAGVPESEDDMILPDKGIIDTPNLARL--------------QRTQEARQGGLVCDI 413
            LCR A    +E+   L + G ID   +AR+               R   A       D+
Sbjct: 170 RLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDV 229

Query: 414 QQIQELLQLHSSRMEFAERQFQTFWDYVKRRDAALRVALQSNFSEPYPALPVFPEDLLNP 473
            Q  + L+   S+ E   +Q Q FW Y K RD AL+ ALQ+NF+ P P  P FP+++L  
Sbjct: 230 LQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD 289

Query: 474 WIPPPPVEREEDDEEQGQE 479
                  E ++D   +  E
Sbjct: 290 LDYEYEAESDKDGSNEAAE 306

BLAST of Spg026733 vs. ExPASy TrEMBL
Match: A0A6A3BU96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00240 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.8e-17
Identity = 90/348 (25.86%), Postives = 141/348 (40.52%), Query Frame = 0

Query: 196 RFVNNLARAKYQEMLKRDFLFERGF-------GNELPRFLRTRIGNLGWSQFCAKPEPVN 255
           +F N+ A+A++Q    R+  FE GF       G   P  +   +  L W +F   P  VN
Sbjct: 16  QFENDEAKARFQNFKNRELFFELGFIFTEETDGGFGPDVMDI-VMPLKWPKFAHHPGSVN 75

Query: 256 SNFVREFYANLD-------------------------HKEEFQDFPHAVFNEMVVAPSND 315
           ++ V+EFYAN+                          H +E  D  HA+F E   +   D
Sbjct: 76  ASLVKEFYANISKPNQHSIFVRGKQIRFTSIAINRYFHLQEVVD-GHAMFEEEADSNKYD 135

Query: 316 QL------------------STAVREM---------GFIKLRLLPTTHDSTVSRDRVLLA 375
            +                   +  RE           F+K +L+PT+H++TVS  R+LL 
Sbjct: 136 GVLEDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLL 195

Query: 376 FAILRSMSIDVGKIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGII 435
            +++ S  IDVG+II  ++ DC  KK   L FPN IT LCR+  V E+  D ILP    I
Sbjct: 196 HSMIVSRPIDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEILPGLSGI 255

Query: 436 DTPNLARL-------------QRTQEARQGGLVCDIQQIQELLQLHSSRMEFAERQFQTF 472
               L  L             +++    +      +  ++E +    +++       + F
Sbjct: 256 TRDRLPLLLGLENPKSKDPVHEQSVGTTESNAEVRLLALEEAVTQTQAQLHALHGDIRNF 315

BLAST of Spg026733 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-16
Identity = 89/337 (26.41%), Postives = 140/337 (41.54%), Query Frame = 0

Query: 187  VEAQGLPFIRFVNNLARAKYQEMLKRDFLFERGFGNELPRFLRTRIGNLG---------- 246
            V  +G  F +F N  A+A++Q    R   FE  F      F +   G LG          
Sbjct: 883  VTPEGSKFQKFENEEAKARFQNFKNRKLFFELSF-----IFTKETDGGLGPDIMDIVTPL 942

Query: 247  -WSQFCAKPEPVNSNFVREFYANLDHKEEFQD---------------FPHAVFN-----E 306
             W +F   P  VN++        +D   +F+D               F +  +N      
Sbjct: 943  KWKKFARHPGSVNTSL-----DVVDRHVQFEDEADSHTYDEILEDLCFENIEWNGRQTSR 1002

Query: 307  MVVAPSNDQLSTAVREMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKIISSEI 366
              V   N QL   +    F+K +L+PT+H++TVS  R+LL  +I+ S  IDVG+II  ++
Sbjct: 1003 YSVNRENLQLRAKLWN-HFLKHKLMPTSHNTTVSLSRLLLLHSIMVSHPIDVGRIIVQQV 1062

Query: 367  LDCWRKKVGKLFFPNTITMLCRRAGVPESEDDMILPDKGIIDTPNLARL----------- 426
             DC  KK   L FPN IT LCR+  V E+  D ILP    I    L  L           
Sbjct: 1063 HDCLSKKASALVFPNLITTLCRKKKVEENAFDEILPGLSSITRARLPLLLGIENPKYKDP 1122

Query: 427  --QRTQEARQGGLVCDIQQIQELLQLHSSRMEFAERQFQTFWDYVKRRDAALRVALQSNF 480
              +++    Q      +  ++E +    + +         F+ YVK RDA +    Q   
Sbjct: 1123 IHEQSAGTTQSNAEARLLALEEAVIQTQTHLHALHGNIYNFFGYVKHRDAVVESMFQEII 1182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON46472.13.3e-2730.16hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON59596.18.5e-2337.26hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
PON78020.14.2e-2237.69hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
KAE8718449.11.2e-1625.86hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus][more]
PON35554.11.2e-1631.89hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG41.6e-2730.16Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5CEY24.1e-2337.26Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A2P5DXM32.0e-2237.69Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A6A3BU965.8e-1725.86Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilon... [more]
A0A6A2Y6972.2e-1626.41Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 399..419
NoneNo IPR availableCOILSCoilCoilcoord: 139..171
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg026733.1Spg026733.1mRNA