Spg026721.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg026721.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nucleolar protein 58-like
Location	scaffold6: 20081480 .. 20088663 (-)
Sequence length	1407
RNA-Seq Expression	Spg026721.1
Synteny	Spg026721.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAACGTCTTTGGCCTTCAGCTAGCTTTGAGACGGCATTGTGCCAACGTCTTAACACTAGACTCTCGAGATTTCTCACTTGGAGCTCGGTCTTTTGACTCCTTATCACTAGTTCTCGGGGTCACTACGATTCGCTCGAATCTTTTCACCTGCTCTTCATCCGTGTATTCCAAGATGGCTCAAAAACTCCTCAAATTCCTCGATTTAGCGCCAATTCGTTCAATCCGCTCCCGAAGCCTCTAATGCTCTAATACCTATAAAACAAACAATTGAACCATAAAAAGGACTCTAACAAGCCTAGATTAGCAGTAATAAAATAGCATGAATTAGGTGCTATCAGCGAACAATCTAGACATAGTAGCATACTCAATCGATGCAATCGTGCAACAACCATGCACCTAACACATGAATTCCGCACCATGCCATGCACACTCAAAACACATGAATTCCGCACCATGCCATGCACACTCAAAACACATGGATTCCGTATCATACCATGCACACTCAAACACATGAATTCCGCACTAGGGGTGATCATCAGTCGGTCGGCGTCAGTTTTGAGCTCAAACCGACGTCAACCACCGACAAATCGATTTTGTTCGATCGGTGGTAGTCGGTCTCAGAGATGTCCATGGAACCGACCGGCCGACCATACGTAAACATCGGTCAGTTTTGGTCGGTTTTGGAAGTTAGCCGAAGCCTATGAGAAGAAAAGAGAATGAGAGAATGCGTTGGGAGAGACAGATTAAAAAGTGCTTTAGGAACCAACAAAGAGATGAAAATAAGGTGAAGAGAGGCATAAGGTTTCAGCGAAGAGAAAGAAACAACCTTCGTGTCGGCAATGAACTCCAGCAAAAAGGTGGTTCCAACGAAGAAATCAAAGACAAAAAAGAAAAAGACAGAGGAAAGGAGATGAGAGTGGGAAGAAGAGAAAGAGAGAGGAAAATAAAAAGAGAGAGTACATTTAAATGAGATGAGAGTGAGAAGAAGAGAAAGAGAGAGGAAAGTCTGAAATAGGAAAGGGGAAGAAAACGTGAAATGTGAAGAAGAAAGAGAAAATAAAAAATAATTTTTTTAAAATAAGTAATGCTTACCTAAAAAATAGGTGATCATTACCTATATGAAAGGTGACAAGATATGCAAGCTGACTTTTTCTTCCTTTCAAAATAACAACTGTCAACATCTGCAGGTTCTTTTTTTAATACGAAATCGGTCGATTCGATTGGTTTGAGCCTTTTTGGGCTCACCGACCGACCGAATGGTCAAATTTTCCTATGAAAAAATCAACCCCGACCGACAAAGTAAAAAAATCGACCAACCGATGTTAGTTTAGTCGGTTTTGTTCGGTCGGCTCGGTTTTTCAGTTTGTGATGCTCATCCCTATTCCGCACATGTCGTGTACACTCGGTTTCCACTCAAGCTCCATGAGCTTACTCAACACTCATAGCCCTCACAAATCTCTCTGAAACTGACTCCTTCGAGTCACGCCGACCCCTAACCATATTACTTAGGGCCTCGACGTTTCTCTACGGCGCTCAACATTCGACCCTCAACCATATTACCCAAGGCCTCGAACTGTTGCATCGCCCTATGGCCATATTACCCAAGGAACCCAATGACTTCAAACACTCATAGCCCTCACAAAGCTCTCTGAGACTGACTCCTTCGAGTCACGCCGACCCCTGACCATATTATCCAGGGCCTCGACGTTTCTCTACGGCGCTCGACGTTTGACCCTTGACCATATTACCCAAGGCGTCGAACTGTTGCATCGCCCCTTGGCCATGTTACCCAAGGCACCCGATGACTTCACAACGTATTGGTCCTTCTGATAATGCTCATTTATGTGTGTTATTTAGCCTTAAAAACTTAGGTTATTGTTAGGAAAGCAAGGACTTTGTGCTTTAATTCATATCATTTAGAATCAATATTAGCAAAACTCTACGGATCACGATAAAAATCTTTAAAATATAGAATTTATGCTTAAAGTGTTGAAAAAGAGAGTATTTTCGTAAGAATTTATCAAAGTTAATGGTTTTGTGCAGTAGTCCTTATTTGTGTTTTAAATGTGTCCACAAATGGAGAAGGAAAATTTAGCAGAGCAATGAAGTTGAAGATTTGCGCCTACATTTAGAAATGAAAAAATCTTGCAGATGTGGAAAATGCGTCCAAATTGCACCTGCAAACTAATAAGGAAAGTGGCCCCAGCTTAAGGCAGATTTTTTCAAAGTAGTTGATTCATGAATTTGTGCCCCATTTACGGCTGCAACTGAGCTTTTCAAAAAAATTTCGAGATTCACAGGATTTGCACAGAATCTTCTAAAAATCTGAAATCTCTTCCCAAATCTCTAAAGATCGTAGATGTTCACCCTCAAGGGACTTCTCACAAAGATCTCGGCAGCCAACTCTACCTTCCAAGGTCTATATAATACGATCAAGGTGCAAGAAGCAAAGGGAGCTCGGATTCTCGTCCTATGATAGTTTTTATGTGTTTCTTTCTTCTCATCTTCTAACCAATCTGAGTTTCAATTCTTCTAGCCTTTGTCGACCCCTTCATTCGAAAGAAGAAGAGGAGAAATATTTGTCTCCCCTTGAAAAAGGCAAAAGCAAGTTAGATAGAGAGGAGAAGGAACCTTAGTTGAGTCTTAGAGTCTTTATTTTCTGTCTTATTTCTTTGTAAGCTGTTTTTACATTCTGTTTTGTTTAATTTCAGTTGTAAGTTTAAGTTTATGTACTTTTCGTTTATCAATGTTCGGTTTTGTGTCCTAAAACTCGTGGTTTGTAATCTTTATGCATATCTCTTGTTTGCAATAAATGTGTTATCGTATTATTCAGAGAATTACTTGTTTATATAACCTAAATCCAATAGACTAAAGATCCTTGGTTATAATATGAATACTCAAACTATATGTACAAACATAAATATGGATCAAGTTTTAGTATATAGCCAAAACGGCCTGTAGTATATGGATAAGGTTAGGTACCTTATCCTGGAGACACTATGGATGCGGCCTGCTTTGCACATAAGGAAAACGATGTGATCCTGCATCGTTCATGTAAAGACATGCGAGTAGGGGCATCCTGTGCAATGAGTTTGTGATAAGGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTTCCTTGTCAAATATTGCATGTTAGATCAATTTTACTATTCCCGAGCTCAAAATATGTTAAAGTTGAGAAGTTAGGGTGTTGAGATTTACTTTTGTCAAATTATGCTCATTTGTGCTTAAAAAGAATTTGACTAAGTTTATTGTTGTGCAGAAAAACAGAGGAAAAGCTAGATTCAGCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATGAAATGCGACCGCATTTCTGGAAAAATAGAGACAGTTCCGAGTCGTCCGCGAGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGGCTGTTTTGACCCCGAAACCGATTGGGCTACCTACCAGCACCTATTTCACAGCTCCTCAACCATTTCCCACACTATATAAGCTCAAGATTCAAAGTCAAATTCAAGCAGAACTCATTTGGAAGAAGAGGGTGGTGACAGAACCCTAGTTGACGCCTATGAGTAGGGATGCCCGAGGTCCTTCTTAGATGACTAAATTCGAACCTGAGTTAGACATCAAACCTTAGGGTTTGTAGGGATTTTCACCCATTCCCACTTGTAAAAGCGAGAGAGTGGAGTGTCTAAGCGAACTCTAGAAGGATTGGATAAATAGAAAACCCATAGTATTTGGCTACTTCCATTATTTCTAGCTTTTGATACATTTCATTTATCTGTATTCTTTACTTCTTATTTTCAATGAAAATGTATTCATTTGCCCTTTATCTCACCATGAGTAGCTATATTCCATTGAGGGGTTCAATATGGTGAATTCCCTTATGGTTCAATAGCTTGAAAGTGTTTTATTTGTTTAAGTTGTGTTCAATGCATGTCATTCTTTATTGAATATCATTCTGATCTTGCTGAGTTTAACTTGATCACTTAGACTTTGCATCCATGTGAGTTTGATCTCAAAAGGGACAAACGATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTAGAAAGAGATTGTTCGGCGGTATAGGGCAAGCTGCCTAAGGCACCCTATATCGACTATAGGGTTATAGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCACAGAAATGTGCATAACAGTACTCGCTCAGCCTTCTAACGGTACTTGGGAGCAAGGCCAAATAGAAGTTAAATCTGACCCAATGCATTGAATAGGCTTAAGATTAAATAATCCATGATTAAGGTTATTGCCTTTGGGATGAACCCATGTTGAATACCTCGTTTGTTTATTATTGTTATTCTTTTATTCATTTGCTTGTTTTATCTATCTTTTCTCAAAATCAATCATCAATCTTATTTCTTTGGTTACCTATTTTTAAAAGCAATCATTTGAGCAATTTCTTCTTCAAATATGAATTTTCAGTTTGTCCTCATGGGATCGATACCCTTGGAATACTTCTAAGGTTTTTTATTACTACGTGCGACAGTGTATACTTGCACTAGGGTTAGCTGAATTTATCTTTATCATTATCTACCATCTTATCTCACATCCATCCATTCAGCTGACGACGCACCAGTTTGCACCAGACCGAGAAATAAGTCACTCTCACTTTATAACGTCGTTTACTGATGAGACTGTCTATTTCATGCGATGACCTAGGTAACTCGATCTTAATCCTGAGCTAACTATGAACTCCTGTTTGTCTGGGATTATCCTTTGATTTGCATGGGTGAGAGTGGGCCAACATCTTTGACTCAATGAGCCTACCATTTTAAGGATAAGACTGGATAGATAGCTGAGGACATAGTCCTGCAAGATGGAATTCACTCCTACTCATGTTAGGGATAGTAGAAAGGTTGTTTCCTTAAGTACTGACTCCGGGACTTGAACAAGGGGCCCCACCCTCTCATTGGCCCTAGAGGGACTCGGTTTGATGATTATATCACAAACCAATTGTTCATTAGAGGATTAGTGGAACTTAAGGAAGAAAGAAGTGTTATAGGGGTAAAACGAACATTTGACCTAGCTATAGTAACGAACAACCTGTGAAGGGTCGACTTACTAATCATGGTTATATCGAGTAGACAAAAACATATCTGCAGTGAGGGGAGTGCAACTACTAGGCTTTAGTGGAGTAACCCGGTAGTTTACAAATGTTGGTTAACTAGGTTAATGAGTTTAACTAGTTAAACCTCGAATCGTTGGAGCCTATGATCTGTAGGTCTATTAGGTCCCCTTGCTAGCTCATATAGTAACAAACCTTGGAACAATATGATGGAAGACGTTGAATTGCTCGAATACAATTTAGGAATTATATCGGTCATATTGGATATTACCGACACATTAGTTTAATTCCGAATTAAACCTAAATTTGAGAGTTAGACATATTTAAATATGATTTAAATATCGAGCACGTGAATAGGGATTCATGTTTGGGAAATTACATTTCGAGAATGGTCGGGATTGGTTGCAAAATATTAAATTAATATTATATTAATTAATATAATTAATTAATAATTATTTTAAATTAATTATGAATTAATTTTAAAAATTGAAATTTAAAATTAGATTTAGAATTTCACATTATTAGTTAATTAACTAAAATTAATTTAAATTTGAATCAAGAAATTAAAAAAGAAATTAATTTTTGGAGGTGGAGTGCATGGTGATTAAACTCATGCACTCCTCCTCAATTAGCCACCAAATCCCACTTAATTGACGCTAGTCTTGTTGTCTAGTTTTAGGGCTTTGAGGATGCATGATTTCCTCTTTAAATAATAGAGGAAGGATTGCTAAAGAAATTAACCAGAAATGCTTAGTGTTATGCTGCCAATTTAGCTCCTCAAACCCAAAAGCTCAAAACTCTTCAAATCTTGAAACCCAAGCTCATTTCCTTCCAAATTCCATCACTAGAGGATCCCACAATCCGTTCCTAGGCCTGAGAATAGCAAGGAAGACACTTGTGGTGGTTCGTGATCATTTGGTGAGAAGAAACAACCAAGCAATCGGTCCAATTTTGAGCTACACAAAGGTTGGTACTGAAAACTCTGTTTTTGAACTTATGAACAACATGCTTTGTTTGATCAAATTGATGTTATTATGTGGCTAAGATCCAAAATCCCTTCCGCATGTTAGATATTAACACCTACAATCAACATGAAAGCAAGTTTATTCTTTGATTTGTGTCCCTTTACTTTTATGCTTTGTACTTTAATTCTATTAATGAGCTAAGCTTCTTCTCGGGGGTTCAAATGTGTGAATTCCTTGAGTAGAAGAAAGCCCCACTAATGCAAAGGCAACCTTGCCTCTTCTTAGCATTGTTTGTTTTTGTTGAAGTTTAGGTTTCATTGTTAGCTTAAATTGATCAATTAAGTTTCCATAGTTTGTGTTCAGCTGGTGCCCAAAAGGAGTCCTTGACGGGGATTGGAACTCTATTTTCTGGAGATTTGAAGCCAAAGACATTTGTTTGGCTTTACATGATCAAGAACAAGATCATGCCTATGACACATGACACCACAATCTCGCAGGAACGTCTCATGTTGTTGTACAATATGTATAAAGGCTTGAATCTCAACCTTGGCCAAATTATCAGGAATGAGATCCTCGCCTGTGGGCACAAGAACGTGGGGAGACTGTTCTTCCCAAGCTTGATCACGAAGATCTACAGGCTTGCAGGAGTTGAGCCCGAGGCTCAAGAGGAGAGGGAGGTTGTCAAGAATTTCATAGATGCGAGCTTGATCAAGAAGCTCATTACAAATGCAAGATTGAAGGTGAACTCTCAAGAAAAGAAGGCACAACAAACTTCTACTCAAACTACAGTGCCTCCAGCAGATTCCACAGCGGCAGATGCGACCACAAATCCAACGCAAATCCCTTTCCCTCCACAGCAAGCTCCTCAACCGCAACCTGAAGATAACTTAGTGGAGCTAAGGAGAGATTTGGAGCATATGTGGATCCAGTGCAAGAACTACTTGATCTACGCTAAAGTTCAAGATAGAATGACCAGGAGTATCTTCAACAGGCAAGTGGAAGACATAGATGACTATCTTCCACCATTCCCCGACATCATTTTAGACTCGCCCAGAGGTGATTGA

mRNA sequence

ATGTCCAACGTCTTTGGCCTTCAGCTAGCTTTGAGACGGCATTGTGCCAACGTCTTAACACTAGACTCTCGAGATTTCTCACTTGGAGCTCGGTCTTTTGACTCCTTATCACTAGTTCTCGGGGTCACTACGATTCGCTCGAATCTTTTCACCTGCTCTTCATCCGTGTATTCCAAGATGGCTCAAAAACTCCTCAAATTCCTCGATTTAGCGCCAATTCCCCTCACAAAGCTCTCTGAGACTGACTCCTTCGAGTCACGCCGACCCCTGACCATATTATCCAGGGCCTCGACGTTTCTCTACGGCGCTCGACGTTTGACCCTTGACCATATTACCCAAGGCGTCGAACTGTTGCATCGCCCCTTGGCCATGTTACCCAAGGCACCCGATGACTTCACAACTTGTAAGTTTAAGTTTATGTACTTTTCGTTTATCAATGTTCGGTTTTGTGTCCTAAAACTCGTGGTACCTTATCCTGGAGACACTATGGATGCGGCCTGCTTTGCACATAAGGAAAACGATGTGATCCTGCATCGTTCATGTAAAGACATGCGAAAAAACAGAGGAAAAGCTAGATTCAGCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATGAAATGCGACCGCATTTCTGGAAAAATAGAGACAGTTCCGAGTCGTCCGCGAGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGGCTCTGGTGCCCAAAAGGAGTCCTTGACGGGGATTGGAACTCTATTTTCTGGAGATTTGAAGCCAAAGACATTTGTTTGGCTTTACATGATCAAGAACAAGATCATGCCTATGACACATGACACCACAATCTCGCAGGAACGTCTCATGTTGTTGTACAATATGTATAAAGGCTTGAATCTCAACCTTGGCCAAATTATCAGGAATGAGATCCTCGCCTGTGGGCACAAGAACGTGGGGAGACTGTTCTTCCCAAGCTTGATCACGAAGATCTACAGGCTTGCAGGAGTTGAGCCCGAGGCTCAAGAGGAGAGGGAGGTTGTCAAGAATTTCATAGATGCGAGCTTGATCAAGAAGCTCATTACAAATGCAAGATTGAAGGTGAACTCTCAAGAAAAGAAGGCACAACAAACTTCTACTCAAACTACAGTGCCTCCAGCAGATTCCACAGCGGCAGATGCGACCACAAATCCAACGCAAATCCCTTTCCCTCCACAGCAAGCTCCTCAACCGCAACCTGAAGATAACTTAGTGGAGCTAAGGAGAGATTTGGAGCATATGTGGATCCAGTGCAAGAACTACTTGATCTACGCTAAAGTTCAAGATAGAATGACCAGGAGTATCTTCAACAGGCAAGTGGAAGACATAGATGACTATCTTCCACCATTCCCCGACATCATTTTAGACTCGCCCAGAGGTGATTGA

Coding sequence (CDS)

ATGTCCAACGTCTTTGGCCTTCAGCTAGCTTTGAGACGGCATTGTGCCAACGTCTTAACACTAGACTCTCGAGATTTCTCACTTGGAGCTCGGTCTTTTGACTCCTTATCACTAGTTCTCGGGGTCACTACGATTCGCTCGAATCTTTTCACCTGCTCTTCATCCGTGTATTCCAAGATGGCTCAAAAACTCCTCAAATTCCTCGATTTAGCGCCAATTCCCCTCACAAAGCTCTCTGAGACTGACTCCTTCGAGTCACGCCGACCCCTGACCATATTATCCAGGGCCTCGACGTTTCTCTACGGCGCTCGACGTTTGACCCTTGACCATATTACCCAAGGCGTCGAACTGTTGCATCGCCCCTTGGCCATGTTACCCAAGGCACCCGATGACTTCACAACTTGTAAGTTTAAGTTTATGTACTTTTCGTTTATCAATGTTCGGTTTTGTGTCCTAAAACTCGTGGTACCTTATCCTGGAGACACTATGGATGCGGCCTGCTTTGCACATAAGGAAAACGATGTGATCCTGCATCGTTCATGTAAAGACATGCGAAAAAACAGAGGAAAAGCTAGATTCAGCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATGAAATGCGACCGCATTTCTGGAAAAATAGAGACAGTTCCGAGTCGTCCGCGAGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGGCTCTGGTGCCCAAAAGGAGTCCTTGACGGGGATTGGAACTCTATTTTCTGGAGATTTGAAGCCAAAGACATTTGTTTGGCTTTACATGATCAAGAACAAGATCATGCCTATGACACATGACACCACAATCTCGCAGGAACGTCTCATGTTGTTGTACAATATGTATAAAGGCTTGAATCTCAACCTTGGCCAAATTATCAGGAATGAGATCCTCGCCTGTGGGCACAAGAACGTGGGGAGACTGTTCTTCCCAAGCTTGATCACGAAGATCTACAGGCTTGCAGGAGTTGAGCCCGAGGCTCAAGAGGAGAGGGAGGTTGTCAAGAATTTCATAGATGCGAGCTTGATCAAGAAGCTCATTACAAATGCAAGATTGAAGGTGAACTCTCAAGAAAAGAAGGCACAACAAACTTCTACTCAAACTACAGTGCCTCCAGCAGATTCCACAGCGGCAGATGCGACCACAAATCCAACGCAAATCCCTTTCCCTCCACAGCAAGCTCCTCAACCGCAACCTGAAGATAACTTAGTGGAGCTAAGGAGAGATTTGGAGCATATGTGGATCCAGTGCAAGAACTACTTGATCTACGCTAAAGTTCAAGATAGAATGACCAGGAGTATCTTCAACAGGCAAGTGGAAGACATAGATGACTATCTTCCACCATTCCCCGACATCATTTTAGACTCGCCCAGAGGTGATTGA

Protein sequence

MSNVFGLQLALRRHCANVLTLDSRDFSLGARSFDSLSLVLGVTTIRSNLFTCSSSVYSKMAQKLLKFLDLAPIPLTKLSETDSFESRRPLTILSRASTFLYGARRLTLDHITQGVELLHRPLAMLPKAPDDFTTCKFKFMYFSFINVRFCVLKLVVPYPGDTMDAACFAHKENDVILHRSCKDMRKNRGKARFSPEMRPHFWEGKMKCDRISGKIETVPSRPRVVVDESSSHLTGSGAQKESLTGIGTLFSGDLKPKTFVWLYMIKNKIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHKNVGRLFFPSLITKIYRLAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQTSTQTTVPPADSTAADATTNPTQIPFPPQQAPQPQPEDNLVELRRDLEHMWIQCKNYLIYAKVQDRMTRSIFNRQVEDIDDYLPPFPDIILDSPRGD

Homology

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BLAST of Spg026721.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 87.8 bits (216), Expect = 2.7e-13
Identity = 72/259 (27.80%), Postives = 120/259 (46.33%), Query Frame = 0


Query: 209 DRISGKIETVPSRPRVVVDESSSHLTGSGAQ-KESLTGIGTLFSGDLKPKTFVWLYMIKN 268
           D  S  I+ +  +  + V E+   +  +GA+   S  G  T     L P   VW + +K+
Sbjct: 127 DEHSEFIQNITQQDLITVLET---VAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKS 186

Query: 269 KIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHKNVGRLFFPSLITKIYR 328
           +++P TH  T+S++R++LL++M  G ++N+G++I +EI AC  +  G LFFPSLIT++ R
Sbjct: 187 RLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCR 246

Query: 329 LAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQTSTQTTVPPADSTAAD 388
            A       EE+      IDA  + ++              AQ+  T++T  P+ S  A 
Sbjct: 247 NARAPFLVNEEKLHNTGEIDAIAVARI--------------AQEGPTESTQQPSSSRPAT 306

Query: 389 ATTNPTQIPFPPQ----QAPQPQPEDNLVELRRDLEHMWIQCKNYLIYAKVQDRMTRSIF 448
           A++N T      Q    +    Q E     +   L+H   Q + +  Y+K +D   +   
Sbjct: 307 ASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKAL 366

Query: 449 NRQVEDIDDYLPPFPDIIL 463
                      P FP  IL
Sbjct: 367 QNNFTRPMPTFPAFPQEIL 368

[Close]

BLAST of Spg026721.1 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 84.3 bits (207), Expect = 3.0e-12
Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 0


Query: 252 GDLKPKTFVWLYMIKNKIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHK 311
           G L P   VW + +K++++P TH  T+S++R++LLY+M  G ++N+G++I +EI AC  +
Sbjct: 39  GALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAAR 98

Query: 312 NVGRLFFPSLITKIYRLAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQ 371
             G LFFPSLIT++ R A       EE+  +   IDA      I  AR+    Q +  QQ
Sbjct: 99  KSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDA------IAVARITQEGQTELTQQ 158

Query: 372 TSTQTTVPPADSTAADATTNPTQIPFPPQQAPQPQPEDNLVELRRDLEHMWIQCKNYLIY 431
            ST      + S A        Q+    Q+  Q + +     +   L+H   Q + +  Y
Sbjct: 159 PSTSRPTVASSSRANGDILQ--QLKALEQRLSQQEVQQ--YHMMSLLQHTHKQQQQFWAY 218

Query: 432 AKVQDRMTRSIFNRQVEDIDDYLPPFPDIIL 463
           +K +D   +              P FP  +L
Sbjct: 219 SKERDTALKKALQNNFTRPIPTFPTFPQELL 239

[Close]

BLAST of Spg026721.1 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-11
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 242 SLTGIGTLFSGDLKPKTFVWLYMIKNKIMPMTHDTTISQERLMLLYNMYKGLNLNLGQII 301
           S  G+ T     L P   +W + +K++++P TH   +S+ER++LLY+M  G ++N+G++I
Sbjct: 75  SSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMI 134

Query: 302 RNEILACGHKNVGRLFFPSLITKIYRLAGVEPEAQEEREVVKNFIDASLIKKLITNARLK 361
             EI AC  +  G LFFPSLI ++ R A       EE+      IDA  + ++      +
Sbjct: 135 HREICACAARKSGALFFPSLIIRMCRNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAE 194

Query: 362 VNSQEKKAQQTSTQTT 378
            + Q   ++ T+  ++
Sbjct: 195 PSHQPSSSRPTAVSSS 210

[Close]

BLAST of Spg026721.1 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 80.5 bits (197), Expect = 4.3e-11
Identity = 57/186 (30.65%), Postives = 95/186 (51.08%), Query Frame = 0


Query: 209 DRISGKIETVPSRPRVVVDESSSHLTGSGAQ-KESLTGIGTLFSGDLKPKTFVWLYMIKN 268
           D  S  IE +     + V E+   +  +GA+   S  G  T     L P   VW + +K+
Sbjct: 118 DEHSEFIENITEHDLITVLET---VAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKS 177

Query: 269 KIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHKNVGRLFFPSLITKIYR 328
            ++P TH  T+S++R++LL++M  G ++N+G++I +EI AC  +  G LFFPSLIT++ R
Sbjct: 178 HLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCR 237

Query: 329 LAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQTSTQTTVPPADSTAAD 388
            A       EE+      IDA  + ++               Q+  T++T  P+ S  A 
Sbjct: 238 NARAPFLVNEEKLHNTGEIDAIAVARI--------------TQEGPTESTQQPSSSRPAT 286

Query: 389 ATTNPT 394
           A+++ T
Sbjct: 298 ASSSRT 286

[Close]

BLAST of Spg026721.1 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-10
Identity = 39/108 (36.11%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 220 SRPRVVVDESSSHLTGSGAQKESLTGIGTLFSGDLKPKTFVWLYMIKNKIMPMTHDTTIS 279
           ++P +V+   +  + G+     S  G  T     L P   VW + +K++++P TH  T+S
Sbjct: 158 TKPELVIVLETVAIVGA-EWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVS 217

Query: 280 QERLMLLYNMYKGLNLNLGQIIRNEILACGHKNVGRLFFPSLITKIYR 328
           +E + LLY+M  G ++N+G++I  EI AC  +  G LFFPSLIT + R
Sbjct: 218 KEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALFFPSLITSMCR 264

[Close]

BLAST of Spg026721.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-13
Identity = 72/259 (27.80%), Postives = 120/259 (46.33%), Query Frame = 0


Query: 209 DRISGKIETVPSRPRVVVDESSSHLTGSGAQ-KESLTGIGTLFSGDLKPKTFVWLYMIKN 268
           D  S  I+ +  +  + V E+   +  +GA+   S  G  T     L P   VW + +K+
Sbjct: 127 DEHSEFIQNITQQDLITVLET---VAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKS 186

Query: 269 KIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHKNVGRLFFPSLITKIYR 328
           +++P TH  T+S++R++LL++M  G ++N+G++I +EI AC  +  G LFFPSLIT++ R
Sbjct: 187 RLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCR 246

Query: 329 LAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQTSTQTTVPPADSTAAD 388
            A       EE+      IDA  + ++              AQ+  T++T  P+ S  A 
Sbjct: 247 NARAPFLVNEEKLHNTGEIDAIAVARI--------------AQEGPTESTQQPSSSRPAT 306

Query: 389 ATTNPTQIPFPPQ----QAPQPQPEDNLVELRRDLEHMWIQCKNYLIYAKVQDRMTRSIF 448
           A++N T      Q    +    Q E     +   L+H   Q + +  Y+K +D   +   
Sbjct: 307 ASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKAL 366

Query: 449 NRQVEDIDDYLPPFPDIIL 463
                      P FP  IL
Sbjct: 367 QNNFTRPMPTFPAFPQEIL 368

[Close]

BLAST of Spg026721.1 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-12
Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 0


Query: 252 GDLKPKTFVWLYMIKNKIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHK 311
           G L P   VW + +K++++P TH  T+S++R++LLY+M  G ++N+G++I +EI AC  +
Sbjct: 39  GALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAAR 98

Query: 312 NVGRLFFPSLITKIYRLAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQ 371
             G LFFPSLIT++ R A       EE+  +   IDA      I  AR+    Q +  QQ
Sbjct: 99  KSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDA------IAVARITQEGQTELTQQ 158

Query: 372 TSTQTTVPPADSTAADATTNPTQIPFPPQQAPQPQPEDNLVELRRDLEHMWIQCKNYLIY 431
            ST      + S A        Q+    Q+  Q + +     +   L+H   Q + +  Y
Sbjct: 159 PSTSRPTVASSSRANGDILQ--QLKALEQRLSQQEVQQ--YHMMSLLQHTHKQQQQFWAY 218

Query: 432 AKVQDRMTRSIFNRQVEDIDDYLPPFPDIIL 463
           +K +D   +              P FP  +L
Sbjct: 219 SKERDTALKKALQNNFTRPIPTFPTFPQELL 239

[Close]

BLAST of Spg026721.1 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-11
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 242 SLTGIGTLFSGDLKPKTFVWLYMIKNKIMPMTHDTTISQERLMLLYNMYKGLNLNLGQII 301
           S  G+ T     L P   +W + +K++++P TH   +S+ER++LLY+M  G ++N+G++I
Sbjct: 75  SSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMI 134

Query: 302 RNEILACGHKNVGRLFFPSLITKIYRLAGVEPEAQEEREVVKNFIDASLIKKLITNARLK 361
             EI AC  +  G LFFPSLI ++ R A       EE+      IDA  + ++      +
Sbjct: 135 HREICACAARKSGALFFPSLIIRMCRNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAE 194

Query: 362 VNSQEKKAQQTSTQTT 378
            + Q   ++ T+  ++
Sbjct: 195 PSHQPSSSRPTAVSSS 210

[Close]

BLAST of Spg026721.1 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-11
Identity = 57/186 (30.65%), Postives = 95/186 (51.08%), Query Frame = 0


Query: 209 DRISGKIETVPSRPRVVVDESSSHLTGSGAQ-KESLTGIGTLFSGDLKPKTFVWLYMIKN 268
           D  S  IE +     + V E+   +  +GA+   S  G  T     L P   VW + +K+
Sbjct: 118 DEHSEFIENITEHDLITVLET---VAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKS 177

Query: 269 KIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHKNVGRLFFPSLITKIYR 328
            ++P TH  T+S++R++LL++M  G ++N+G++I +EI AC  +  G LFFPSLIT++ R
Sbjct: 178 HLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCR 237

Query: 329 LAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQTSTQTTVPPADSTAAD 388
            A       EE+      IDA  + ++               Q+  T++T  P+ S  A 
Sbjct: 238 NARAPFLVNEEKLHNTGEIDAIAVARI--------------TQEGPTESTQQPSSSRPAT 286

Query: 389 ATTNPT 394
           A+++ T
Sbjct: 298 ASSSRT 286

[Close]

BLAST of Spg026721.1 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-10
Identity = 69/255 (27.06%), Postives = 114/255 (44.71%), Query Frame = 0


Query: 209 DRISGKIETVPSRPRVVVDESSSHLTGSGAQ-KESLTGIGTLFSGDLKPKTFVWLYMIKN 268
           D  S  IE +     + V E+   +  +GA+   S  G  T     L P   VW + +K+
Sbjct: 57  DEHSEFIENITEPELITVLET---VAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKS 116

Query: 269 KIMPMTHDTTISQERLMLLYNMYKGLNLNLGQIIRNEILACGHKNVGRLFFPSLITKIYR 328
           +++P TH   +S++R++LL++M  G ++N+G++I +EI AC  +  G LFFPSLIT++ R
Sbjct: 117 RLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCR 176

Query: 329 LAGVEPEAQEEREVVKNFIDASLIKKLITNARLKVNSQEKKAQQTSTQTTVPPADSTAAD 388
            A       EE+      IDA  + ++               Q+  T++T  P+ S  A 
Sbjct: 177 NAPF--LVNEEKLHNTGEIDAIAVARI--------------TQEGPTESTQQPSSSRPAA 236

Query: 389 ATTNPTQIPFPPQQAPQPQPEDNLVELRRDLEHMWIQCKNYLIYAKVQDRMTRSIFNRQV 448
           A+++ T            Q    L +     EH   Q + +  Y+K +D   +       
Sbjct: 237 ASSSRT-------NGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNF 285

Query: 449 EDIDDYLPPFPDIIL 463
                  P FP  IL
Sbjct: 297 TRPIPTFPAFPQEIL 285

The following BLAST results are available for this feature:

BLAST of Spg026721.1 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	2.7e-13	27.80	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON59596.1	3.0e-12	29.86	hypothetical protein PanWU01x14_158080 [Parasponia andersonii]	[more]
PON50458.1	2.5e-11	30.88	hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]	[more]
PON35554.1	4.3e-11	30.65	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
PON70375.1	1.6e-10	36.11	hypothetical protein PanWU01x14_080440 [Parasponia andersonii]	[more]

BLAST of Spg026721.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg026721.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	1.3e-13	27.80	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5CEY2	1.4e-12	29.86	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE...	[more]
A0A2P5BNT0	1.2e-11	30.88	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5AGA5	2.1e-11	30.65	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5DXM3	1.3e-10	27.06	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]

BLAST of Spg026721.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..395

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg026721	Spg026721	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg026721.1-cds	Spg026721.1-cds-scaffold6:20081480..20082180	CDS
Spg026721.1-cds	Spg026721.1-cds-scaffold6:20085215..20085365	CDS
Spg026721.1-cds	Spg026721.1-cds-scaffold6:20085591..20085680	CDS
Spg026721.1-cds	Spg026721.1-cds-scaffold6:20085884..20085947	CDS
Spg026721.1-cds	Spg026721.1-cds-scaffold6:20086845..20087025	CDS
Spg026721.1-cds	Spg026721.1-cds-scaffold6:20088444..20088663	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg026721.1	Spg026721.1-protein	polypeptide