Spg022074.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg022074.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Zinc finger BED domain-containing protein DAYSLEEPER
Location	scaffold2: 11462598 .. 11465431 (+)
Sequence length	663
RNA-Seq Expression	Spg022074.1
Synteny	Spg022074.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGAACTCCTCGATCATCTCCCTGTGGTCTCTGAAGCTCCTAACCTACAATCCAAAGGCCTCAAAGAACAAACTCTAGATAGAACGCACAAAGGTACAATTCCATAGTATGTGGTCCAGATCTTCCTTCGCCCTCCAATAAAGGATACAACAAAAAAACCCAACCAACGAAATGCTACGACTACCCTTTGCAGCAGTGCCATAAGGGAAACTTTTCTAACATTTTTTACATAATACCCTCCTGCAATCATCACTTGCCAATTCTTCCGTTGTAAAGTACTTTACGACATCAAACTTTCTTTTGTTTTTATTTATGAAAGCTATTTCTTCAGCCATGTTGGAAAATAAACTCCTGATACTGATACTAAAAAAAAATTATCGACAAATTAGTTAGAAATAGTAAATGTTTATAATCGAAGACCTAAAAAAAGAAATTAAAGTTGTCAAACTCTATGTTTGTTTAAAAAAAAAAGAAAAGAAATAAAATAAGTGGGATTAAATATGTAGGTTCTAGTAAAGTTCAATTAAACTGTATATGCTGCTGTAAAAATCGGGGTTGCTGTTATTTACATAAGCATTGAAGCAAAGGTTGCATTTATCATGGAAATGAAGTCCATACACTTGCCTAAAATACCAATTCCTCAATAGATCTCACAACCCATCAAAATTCCACCAGCTATCTTAGCTCTTTTCTTCTTAGTTGCTTTTCCCTTTTTGTTCATCAGTAGATCTGTTGAGGAATTGACTAAGGTATTTTAGGCAAGTGTATGAGCTTGTCATTTTCACGATAAATGCAAAAATCTTTTGCTGTCTATGCTTGTGTAAATGACAACAACTCCGGTTTTTACAGTAACATATTCAGTTTCATTGAACTTTCTTAGAACTTACATATTTAATTCCACGATTTTTATTTTTATTTTTTTTTTCTTTTTTAAAGAAACATAGAGTTAGACAAACAAAGAGTTTGACAACTTTAATTTCTTTCCTTTTAGGTTCTCGATTATCAACATTTACTGTTTCTTTAACTAATTTGTTGATGATTTTTTTTGGGTGTTTTTCGAACATGTCTGATGAAATCACTTTCATAAATTAGAACAAAATAAAATTCGATGTTTAGTACTTTACTGAGGAAGGGTTGGCAAGTGATGATTGTAGGAGTGTATTATGTAAAAAATGTAAGAAAAGTTTCCCTTATGACATTGTTGCAAAGGGTAGTCGTACCAATATTAGCGACCTTAAGCAACATGTGGCTGGAGATTGCATCAATATTTTAGGTAGAGATAAAAATACTCACTTGAAGGGCACTACCTCTGCTTAGAACTTCGATTAAAAGATCTGTACCTATTGTCATGACCTTGCTTGGACAATTATCATGGGTGAACATCGACTTGATATCATAGAGTGTTCAGAGTTTATTGCTTTTTCTAAAGGTCTCCAACGTAAGTTCATAATAAACTTTGACATATTTAAAAAGTATTGCTTGGGAACCTACGTGGAAGGAAGAGAAATTCTGATAAAAACACCTCAAAAGAAGATATCTTTGAGTATGGACTTATGGCGATCTCTTCGATATGTAAGATATGTATTTATTACTGCAACTTTTACGGACATGGAATGACGGTTGCACAAATGCATTCTGAGCGTTGTACTTGAATCCGATCTCGATTCTCCTAACACTTTTAGGCATGCACTTGGTATTTGTATGTCCGAGTGTAGATTGAAGAAGAAATTGTTCTCTGTCACCATCAATCAAGTGTTGATTGGTGCAGCCAAGAATGATTTGAGGTGCTTGCTTTCATTGGATAATCCATTTCTGTTCAATGGCCAACTCTTGATTTGAAGTTGTATTTCTCAAACTTTAACTGAGATTGCAAAGGATTTATTATGCACAGGAGAAACTGTCGTAATCAAAGTTTGACACATTGTAGCTAATGTGATTACATCAAACTCTCACAAGGAAATATTTCTCCCACTCAAGCAAGAAGTCCAAGTGTCATCTGAGAGCAACTTTTTGTTTGATATGGATGATCGAACGAAATGGAATACCACCTACAATATTTTGTTGTCAGCTTTGGAAGTGAGAGCATGCTTTGATATTGTTATGGATACTGATGAAGCAATGAAAGACCCATCGGAGGATGATTGGAAGAAAGTTGAGGTTCTTTGCAAGTATTTAAAGTTTCTATTTGATGCGACATTCACGTTTAGCACCGCAACCAGTGCTCATGCAGCTGCTGTGTTTGAACGTATATGAAACATGCTTTTAGACTTGTGTGCTGCAAGTGCAAATGGGGATACCATAGTTTTATGAGCTACCTCAAGAAAACTTTGCTGGAGACATTGAAAAAATATTTGAAAGATTACAACACAGTTCTAGGAGCTGGTATTGTCATAAATCCTCGCTTCAAGATGAGGATGGTTGAATAAAATTTTGAAAAAATCTATGGTGAAGAATACTCTAGCTACATCAAAATGGTGTCCGACAAAATTCAACAACTCTTTAATGAATATATGGAATCACCTCCATCCCTCACAGGTTTTGAGGTGTATGTTGGCAAGACTGACGATGAATAAAAATTGGAGCTGGATTGGTATTTGAAAGTTTGATACCTGTTAGCGTGCAAGACTTTGATGTATTGCAATGGTGGAAATCGGTTGGGTTGACCTATCCTACCATTTCGAAAGTGGCTCAGAAAATTTTGTCCATTTCATTTTCTACTGTCACTTCTTTCGAGTCAATATTCAATATGGAAAAGAAAAAGATGGATGGGTATCAGAGCTCATTGCATTTAAAAACAGTGGGAGCAGAAATATGTTTTAAAGATTAG

mRNA sequence

ATGGAGGAGGAACTCCTCGATCATCTCCCTGTGGTCTCTGAAGCTCCTAACCTACAATCCAAAGGCCTCAAAGAACAAACTCTAGATAGAACGCACAAAGCTAATGTGATTACATCAAACTCTCACAAGGAAATATTTCTCCCACTCAAGCAAGAAGTCCAAGTGTCATCTGAGAGCAACTTTTTGTTTGATATGGATGATCGAACGAAATGGAATACCACCTACAATATTTTGTTGTCAGCTTTGGAAGTGAGAGCATGCTTTGATATTGTTATGGATACTGATGAAGCAATGAAAGACCCATCGGAGGATGATTGGAAGAAAGTTGAGGTTCTTTGCAAGTATTTAAAGTTTCTATTTGATGCGACATTCACGTTTAGCACCGCAACCAGTGCTCATGCAGCTGCTGTGTTTGAACCTGGATTGGTATTTGAAAGTTTGATACCTGTTAGCGTGCAAGACTTTGATGTATTGCAATGGTGGAAATCGGTTGGGTTGACCTATCCTACCATTTCGAAAGTGGCTCAGAAAATTTTGTCCATTTCATTTTCTACTGTCACTTCTTTCGAGTCAATATTCAATATGGAAAAGAAAAAGATGGATGGGTATCAGAGCTCATTGCATTTAAAAACAGTGGGAGCAGAAATATGTTTTAAAGATTAG

Coding sequence (CDS)

ATGGAGGAGGAACTCCTCGATCATCTCCCTGTGGTCTCTGAAGCTCCTAACCTACAATCCAAAGGCCTCAAAGAACAAACTCTAGATAGAACGCACAAAGCTAATGTGATTACATCAAACTCTCACAAGGAAATATTTCTCCCACTCAAGCAAGAAGTCCAAGTGTCATCTGAGAGCAACTTTTTGTTTGATATGGATGATCGAACGAAATGGAATACCACCTACAATATTTTGTTGTCAGCTTTGGAAGTGAGAGCATGCTTTGATATTGTTATGGATACTGATGAAGCAATGAAAGACCCATCGGAGGATGATTGGAAGAAAGTTGAGGTTCTTTGCAAGTATTTAAAGTTTCTATTTGATGCGACATTCACGTTTAGCACCGCAACCAGTGCTCATGCAGCTGCTGTGTTTGAACCTGGATTGGTATTTGAAAGTTTGATACCTGTTAGCGTGCAAGACTTTGATGTATTGCAATGGTGGAAATCGGTTGGGTTGACCTATCCTACCATTTCGAAAGTGGCTCAGAAAATTTTGTCCATTTCATTTTCTACTGTCACTTCTTTCGAGTCAATATTCAATATGGAAAAGAAAAAGATGGATGGGTATCAGAGCTCATTGCATTTAAAAACAGTGGGAGCAGAAATATGTTTTAAAGATTAG

Protein sequence

MEEELLDHLPVVSEAPNLQSKGLKEQTLDRTHKANVITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTDEAMKDPSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVFEPGLVFESLIPVSVQDFDVLQWWKSVGLTYPTISKVAQKILSISFSTVTSFESIFNMEKKKMDGYQSSLHLKTVGAEICFKD

Homology

[Close]

BLAST of Spg022074.1 vs. NCBI nr
Match: XP_030510034.1 (zinc finger BED domain-containing protein DAYSLEEPER [Cannabis sativa] >XP_030510035.1 zinc finger BED domain-containing protein DAYSLEEPER [Cannabis sativa] >XP_030510036.1 zinc finger BED domain-containing protein DAYSLEEPER [Cannabis sativa])

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19
Identity = 99/328 (30.18%), Postives = 128/328 (39.02%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS SH+E FL LKQ +QV SE      +DD+T+WNTTY +L++A E++  F  +  +D
Sbjct: 586 VKTSESHEEKFLELKQHLQVPSERT--LSLDDQTQWNTTYQMLVAASELKEVFSCLDTSD 645

Query: 96  EAMK-DPSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHA-------------------- 155
              K  PS DDWK+VE++C YLK LFDA    +T T+  A                    
Sbjct: 646 PDYKAAPSMDDWKQVEIVCMYLKLLFDAVNILTTTTNPTAITFFHEVWKIQSELVRAATS 705

Query: 156 -----------------------------AAVFEP------------------------- 215
                                        A V +P                         
Sbjct: 706 EDPFINALTKRMQEKIDKYWKECSLALATAVVMDPRFKMKLVEFSFNKIYGEDAPTFIKV 765

Query: 216 ----------------------------------------------GL------------ 221
                                                         GL            
Sbjct: 766 VDDGIHELFHEYVALPLPLTPTYAEEGNSGNSRTDEQQGGTLLSDNGLTDFDVYIMETTS 825

[Close]

BLAST of Spg022074.1 vs. NCBI nr
Match: KAG6662514.1 (hypothetical protein CIPAW_03G248300 [Carya illinoinensis] >KAG6662515.1 hypothetical protein CIPAW_03G248300 [Carya illinoinensis] >KAG6662516.1 hypothetical protein CIPAW_03G248300 [Carya illinoinensis] >KAG6662517.1 hypothetical protein CIPAW_03G248300 [Carya illinoinensis] >KAG6662518.1 hypothetical protein CIPAW_03G248300 [Carya illinoinensis])

HSP 1 Score: 106.7 bits (265), Expect = 2.6e-19
Identity = 94/303 (31.02%), Postives = 127/303 (41.91%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS +H+E FL LKQ++QV SE +    +DD+T+WNTTY +L++A E +  F  +  +D
Sbjct: 565 VKTSEAHEEKFLDLKQQLQVPSERS--LSLDDQTQWNTTYQMLVAASESKEVFSCLDTSD 624

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDAT--FTFSTATSA-------------------- 155
              KD PS +DWK VE LC YLK LFDA    TF+T  +A                    
Sbjct: 625 PDYKDAPSMEDWKHVETLCTYLKLLFDAANILTFTTNPAAITFFHELWKIHTELARAVAS 684

Query: 156 ---------------------------HAAAVFEP----GLVF----------------- 215
                                        A V +P     L+F                 
Sbjct: 685 EDPFISNLSKMMQEKVEKYWKDSSLVLAIAVVMDPRFKMKLLFHEYLTLPLPLTPTYAEE 744

Query: 216 -----------------------------------------------ESLIPVSVQDFDV 221
                                                          ESL+P  VQ+FDV
Sbjct: 745 GNGGSNIKMEDSQGGNLLSDHGLTDFDVYIMETTSQQMKSELDQYLEESLLP-RVQEFDV 804

[Close]

BLAST of Spg022074.1 vs. NCBI nr
Match: XP_011655416.1 (zinc finger BED domain-containing protein DAYSLEEPER isoform X2 [Cucumis sativus] >XP_031741275.1 zinc finger BED domain-containing protein DAYSLEEPER isoform X2 [Cucumis sativus] >KAE8652993.1 hypothetical protein Csa_023497 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 94/328 (28.66%), Postives = 126/328 (38.41%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS+SH+E FL LKQ++QV SE N    +DD+T+WNTTY++L++A E++  F  +  +D
Sbjct: 399 VTTSDSHEEKFLELKQQLQVPSERNLF--LDDQTQWNTTYHMLVAASEMKEVFSCLDTSD 458

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVF---------------- 155
              ++ PS +DWK VE+LC YLK LFDA    +T T   A  VF                
Sbjct: 459 PDYREAPSLEDWKLVEILCTYLKLLFDAANILTTTTHPSAITVFHEVWRIHSELARAITN 518

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 519 EDPFISSLSKMMLEKFDKYWKDCSIVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKV 578

Query: 216 ------------------------EPGLV------------------------------- 221
                                   E G V                               
Sbjct: 579 VDDGIHELFDEYVALPLPLTPTYAEDGSVDGNMKGEDSQGNLLSDNGFTDFDVYIMETTS 638

[Close]

BLAST of Spg022074.1 vs. NCBI nr
Match: XP_016899814.1 (PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 94/328 (28.66%), Postives = 126/328 (38.41%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS+SH+E FL LKQ++QV SE N    +DD+T+WNTTY++L++A E++  F  +  +D
Sbjct: 399 VTTSDSHEEKFLELKQQLQVPSERNLF--LDDQTQWNTTYHMLVAASEMKEVFSCLDTSD 458

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVF---------------- 155
              ++ PS +DWK VE+LC YLK LFDA    +T T   A  VF                
Sbjct: 459 PDYREAPSLEDWKLVEILCTYLKLLFDAANILTTTTHPSAITVFHEVWRIHSELARAITN 518

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 519 EDPFISSLSKMMLEKFDKYWKDCSIVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKV 578

Query: 216 ------------------------EPGLV------------------------------- 221
                                   E G V                               
Sbjct: 579 VDDGIHELFDEYVALPLPLTPTYAEDGSVDGNMKGEDSQGNLLSDNGFTDFDVYIMETTS 638

[Close]

BLAST of Spg022074.1 vs. NCBI nr
Match: XP_016899815.1 (PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Cucumis melo] >XP_016899816.1 PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Cucumis melo] >KAA0050131.1 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Cucumis melo var. makuwa] >TYK06385.1 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 94/328 (28.66%), Postives = 126/328 (38.41%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS+SH+E FL LKQ++QV SE N    +DD+T+WNTTY++L++A E++  F  +  +D
Sbjct: 373 VTTSDSHEEKFLELKQQLQVPSERNLF--LDDQTQWNTTYHMLVAASEMKEVFSCLDTSD 432

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVF---------------- 155
              ++ PS +DWK VE+LC YLK LFDA    +T T   A  VF                
Sbjct: 433 PDYREAPSLEDWKLVEILCTYLKLLFDAANILTTTTHPSAITVFHEVWRIHSELARAITN 492

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 493 EDPFISSLSKMMLEKFDKYWKDCSIVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKV 552

Query: 216 ------------------------EPGLV------------------------------- 221
                                   E G V                               
Sbjct: 553 VDDGIHELFDEYVALPLPLTPTYAEDGSVDGNMKGEDSQGNLLSDNGFTDFDVYIMETTS 612

[Close]

BLAST of Spg022074.1 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.6e-19
Identity = 85/312 (27.24%), Postives = 126/312 (40.38%), Query Frame = 0


Query: 35  NVITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDT 94
           +V TS SH+E F  LK+++QV SE   +  +DD+T+WNTTY +L++A E++  F  +   
Sbjct: 365 HVKTSESHEERFTELKEQLQVPSEK--VLSLDDQTQWNTTYMMLVAASELKEVFSCLDTA 424

Query: 95  D-EAMKDPSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHA------------------- 154
           D +  K PS +DW+ VE LC +LK LF+A  T  +  +  A                   
Sbjct: 425 DPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIA 484

Query: 155 ------------------------------AAVFEP------------------------ 214
                                         A V +P                        
Sbjct: 485 GEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIK 544

Query: 215 ------------------------------GL----------------------VFESLI 221
                                         GL                      + E+L+
Sbjct: 545 TVDDGIHELFTEYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLDETLL 604

[Close]

BLAST of Spg022074.1 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 71/320 (22.19%), Postives = 115/320 (35.94%), Query Frame = 0


Query: 39  SNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD-EA 98
           S+ H++ F  +  ++++ S      D+   T+WNTTY +LL+AL+ +  F  +   D + 
Sbjct: 415 SSVHEDKFAEIALQLEIPSAKTLCLDV--TTQWNTTYLMLLAALDYQQVFASLETCDGDY 474

Query: 99  MKDPSEDDWKKVEVLCKYLKFLFDAT---------------------------------- 158
            + PS +DWKKVE  C YL  L+D+                                   
Sbjct: 475 NEAPSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKLQSELSNAIAHEDP 534

Query: 159 ----------------------------------------FTFSTATSAHAA-------- 218
                                                   F++S   S  AA        
Sbjct: 535 IFRSTAKIMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSVEAAKYVKVVDD 594

Query: 219 ----------------------------------------------AVFEPGL------V 221
                                                         A  +P +      +
Sbjct: 595 AIHELYSEYATQGEANRDAHVTDNSAAVTPPNGDELLDFDIYLSEIATSQPSISELEQYL 654

[Close]

BLAST of Spg022074.1 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 46/173 (26.59%), Postives = 78/173 (45.09%), Query Frame = 0


Query: 39  SNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTDEAM 98
           S S +E F  +  ++++ S      D+   T+WNTTY +LL+AL+ +  F  +  +D+  
Sbjct: 374 SPSREEKFAEIALQLEIPSTKTLCLDV--TTQWNTTYLMLLAALDYKQAFSTLETSDDNY 433

Query: 99  KD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVFEPGL--------------- 158
            + PS +DWKKVE  C YLK L+D+  +   A +  +   F                   
Sbjct: 434 NEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGHEDP 493

Query: 159 VFESLIPVSVQDFDVLQWWKSVGLTYPTI----SKVAQKILSISFSTVTSFES 192
           VF S+     + FD  ++WK   L          +   K++  S+S +   E+
Sbjct: 494 VFSSIAKDMHERFD--KYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEA 542

[Close]

BLAST of Spg022074.1 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 145 ESLIPVSVQDFDVLQWWKSVGLTYPTISKVAQKILSISFSTVTSFESIFN--MEKKKMDG 204
           ESL P  +Q+FD+L WWK   L YPT+SK+A+ IL+I  S V+S  SIF+     + +D 
Sbjct: 624 ESLTP-RIQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFSAGTGTRMLDD 683

Query: 205 YQSSLHLKTVGAEICFKD 221
           Y+SS   + V A +C KD
Sbjct: 684 YRSSSRPEIVEALVCAKD 700

[Close]

BLAST of Spg022074.1 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-08
Identity = 33/98 (33.67%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 40  NSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMD-TDEAM 99
           ++H+  F  +  E++++S ++   D+   ++WNTTY +LL+AL+ R  F ++    D   
Sbjct: 342 DAHENKFAEIAVELKITSNNSLCLDV--TSEWNTTYLMLLAALDYRQVFTLLESYYDNYG 401

Query: 100 KDPSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAA 137
             PS +DWKKVE  C +LK L+  T    +A   H  A
Sbjct: 402 TAPSTEDWKKVEAACGFLKLLYAFTLNIMSAEGNHQTA 437

[Close]

BLAST of Spg022074.1 vs. ExPASy TrEMBL
Match: A0A803QB89 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.4e-20
Identity = 99/328 (30.18%), Postives = 128/328 (39.02%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS SH+E FL LKQ +QV SE      +DD+T+WNTTY +L++A E++  F  +  +D
Sbjct: 586 VKTSESHEEKFLELKQHLQVPSERT--LSLDDQTQWNTTYQMLVAASELKEVFSCLDTSD 645

Query: 96  EAMK-DPSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHA-------------------- 155
              K  PS DDWK+VE++C YLK LFDA    +T T+  A                    
Sbjct: 646 PDYKAAPSMDDWKQVEIVCMYLKLLFDAVNILTTTTNPTAITFFHEVWKIQSELVRAATS 705

Query: 156 -----------------------------AAVFEP------------------------- 215
                                        A V +P                         
Sbjct: 706 EDPFINALTKRMQEKIDKYWKECSLALATAVVMDPRFKMKLVEFSFNKIYGEDAPTFIKV 765

Query: 216 ----------------------------------------------GL------------ 221
                                                         GL            
Sbjct: 766 VDDGIHELFHEYVALPLPLTPTYAEEGNSGNSRTDEQQGGTLLSDNGLTDFDVYIMETTS 825

[Close]

BLAST of Spg022074.1 vs. ExPASy TrEMBL
Match: A0A1S4DVS1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990669 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-19
Identity = 94/328 (28.66%), Postives = 126/328 (38.41%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS+SH+E FL LKQ++QV SE N    +DD+T+WNTTY++L++A E++  F  +  +D
Sbjct: 373 VTTSDSHEEKFLELKQQLQVPSERNLF--LDDQTQWNTTYHMLVAASEMKEVFSCLDTSD 432

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVF---------------- 155
              ++ PS +DWK VE+LC YLK LFDA    +T T   A  VF                
Sbjct: 433 PDYREAPSLEDWKLVEILCTYLKLLFDAANILTTTTHPSAITVFHEVWRIHSELARAITN 492

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 493 EDPFISSLSKMMLEKFDKYWKDCSIVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKV 552

Query: 216 ------------------------EPGLV------------------------------- 221
                                   E G V                               
Sbjct: 553 VDDGIHELFDEYVALPLPLTPTYAEDGSVDGNMKGEDSQGNLLSDNGFTDFDVYIMETTS 612

[Close]

BLAST of Spg022074.1 vs. ExPASy TrEMBL
Match: A0A5D3C4S1 (Zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00800 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-19
Identity = 94/328 (28.66%), Postives = 126/328 (38.41%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS+SH+E FL LKQ++QV SE N    +DD+T+WNTTY++L++A E++  F  +  +D
Sbjct: 373 VTTSDSHEEKFLELKQQLQVPSERNLF--LDDQTQWNTTYHMLVAASEMKEVFSCLDTSD 432

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVF---------------- 155
              ++ PS +DWK VE+LC YLK LFDA    +T T   A  VF                
Sbjct: 433 PDYREAPSLEDWKLVEILCTYLKLLFDAANILTTTTHPSAITVFHEVWRIHSELARAITN 492

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 493 EDPFISSLSKMMLEKFDKYWKDCSIVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKV 552

Query: 216 ------------------------EPGLV------------------------------- 221
                                   E G V                               
Sbjct: 553 VDDGIHELFDEYVALPLPLTPTYAEDGSVDGNMKGEDSQGNLLSDNGFTDFDVYIMETTS 612

[Close]

BLAST of Spg022074.1 vs. ExPASy TrEMBL
Match: A0A0A0LYS2 (BED-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G229510 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-19
Identity = 94/328 (28.66%), Postives = 126/328 (38.41%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS+SH+E FL LKQ++QV SE N    +DD+T+WNTTY++L++A E++  F  +  +D
Sbjct: 399 VTTSDSHEEKFLELKQQLQVPSERNLF--LDDQTQWNTTYHMLVAASEMKEVFSCLDTSD 458

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVF---------------- 155
              ++ PS +DWK VE+LC YLK LFDA    +T T   A  VF                
Sbjct: 459 PDYREAPSLEDWKLVEILCTYLKLLFDAANILTTTTHPSAITVFHEVWRIHSELARAITN 518

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 519 EDPFISSLSKMMLEKFDKYWKDCSIVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKV 578

Query: 216 ------------------------EPGLV------------------------------- 221
                                   E G V                               
Sbjct: 579 VDDGIHELFDEYVALPLPLTPTYAEDGSVDGNMKGEDSQGNLLSDNGFTDFDVYIMETTS 638

[Close]

BLAST of Spg022074.1 vs. ExPASy TrEMBL
Match: A0A1S4DV03 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990669 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-19
Identity = 94/328 (28.66%), Postives = 126/328 (38.41%), Query Frame = 0


Query: 36  VITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDTD 95
           V TS+SH+E FL LKQ++QV SE N    +DD+T+WNTTY++L++A E++  F  +  +D
Sbjct: 399 VTTSDSHEEKFLELKQQLQVPSERNLF--LDDQTQWNTTYHMLVAASEMKEVFSCLDTSD 458

Query: 96  EAMKD-PSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHAAAVF---------------- 155
              ++ PS +DWK VE+LC YLK LFDA    +T T   A  VF                
Sbjct: 459 PDYREAPSLEDWKLVEILCTYLKLLFDAANILTTTTHPSAITVFHEVWRIHSELARAITN 518

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 519 EDPFISSLSKMMLEKFDKYWKDCSIVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKV 578

Query: 216 ------------------------EPGLV------------------------------- 221
                                   E G V                               
Sbjct: 579 VDDGIHELFDEYVALPLPLTPTYAEDGSVDGNMKGEDSQGNLLSDNGFTDFDVYIMETTS 638

[Close]

BLAST of Spg022074.1 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-20
Identity = 85/312 (27.24%), Postives = 126/312 (40.38%), Query Frame = 0


Query: 35  NVITSNSHKEIFLPLKQEVQVSSESNFLFDMDDRTKWNTTYNILLSALEVRACFDIVMDT 94
           +V TS SH+E F  LK+++QV SE   +  +DD+T+WNTTY +L++A E++  F  +   
Sbjct: 365 HVKTSESHEERFTELKEQLQVPSEK--VLSLDDQTQWNTTYMMLVAASELKEVFSCLDTA 424

Query: 95  D-EAMKDPSEDDWKKVEVLCKYLKFLFDATFTFSTATSAHA------------------- 154
           D +  K PS +DW+ VE LC +LK LF+A  T  +  +  A                   
Sbjct: 425 DPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIA 484

Query: 155 ------------------------------AAVFEP------------------------ 214
                                         A V +P                        
Sbjct: 485 GEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIK 544

Query: 215 ------------------------------GL----------------------VFESLI 221
                                         GL                      + E+L+
Sbjct: 545 TVDDGIHELFTEYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLDETLL 604

The following BLAST results are available for this feature:

BLAST of Spg022074.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030510034.1	1.5e-19	30.18	zinc finger BED domain-containing protein DAYSLEEPER [Cannabis sativa] >XP_03051...	[more]
KAG6662514.1	2.6e-19	31.02	hypothetical protein CIPAW_03G248300 [Carya illinoinensis] >KAG6662515.1 hypothe...	[more]
XP_011655416.1	1.0e-18	28.66	zinc finger BED domain-containing protein DAYSLEEPER isoform X2 [Cucumis sativus...	[more]
XP_016899814.1	1.0e-18	28.66	PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 ...	[more]
XP_016899815.1	1.0e-18	28.66	PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 ...	[more]

BLAST of Spg022074.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2N5	4.6e-19	27.24	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
Q75HY5	3.9e-10	22.19	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	1.5e-09	26.59	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	2.0e-09	46.15	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q0JMB2	1.7e-08	33.67	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]

BLAST of Spg022074.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803QB89	7.4e-20	30.18	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A1S4DVS1	4.8e-19	28.66	zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Cucumis ...	[more]
A0A5D3C4S1	4.8e-19	28.66	Zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Cucumis ...	[more]
A0A0A0LYS2	4.8e-19	28.66	BED-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G229510 PE...	[more]
A0A1S4DV03	4.8e-19	28.66	zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Cucumis ...	[more]

BLAST of Spg022074.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	3.3e-20	27.24	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 153..219 e-value: 1.2E-15 score: 57.0
None	No IPR available	PANTHER	PTHR23272:SF15	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1	coord: 145..220
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 145..220 coord: 36..139
None	No IPR available	PANTHER	PTHR23272:SF15	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1	coord: 36..139
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 65..220

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg022074	Spg022074	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg022074.1-cds	Spg022074.1-cds-scaffold2:11462598..11462697	CDS
Spg022074.1-cds	Spg022074.1-cds-scaffold2:11464532..11464849	CDS
Spg022074.1-cds	Spg022074.1-cds-scaffold2:11465187..11465431	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg022074.1	Spg022074.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity