Spg009977.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGGAGAAACCCGAAGTGTAGGGCGAACAAAAGCGGGAATAGGAATGACTCAACCTGTGAAGAAAGCCAGAGTGGAAGAAGAACTTTGCTATGGCCACCACTCACATGAAATCGATACAGCAGAAGCAGATGAATGCAATAGCACTGCCGACGAGCAAGAGGCGGCGCTCGTGGCACTGGTCGATCATCGTACTCGTGAAGTCCACCATCTCCGGCAGCGTGTTTCCTACTACACTCGTCAGGTTATCTTTTCTCCGCCATCTTCATCATTTCATTAGTTACACCTGACCCGCGACAATGTCAAGTCCGATACATTACGAATCGCATTTCTTTATAATCGCTAAACATTATCGGACAAGCTTTTTAAAATATTTGGAACGATATTATATTATCAGTTCATATGCATTTGCAAAATTTCTACAGCTAGAGGAAGCAGAGAAGCGGTTGCAGGATTCTGAATCTATGTTGGCCCGCTTTCGAGGTCCACGTCATACTTCGCCATCAAGAAGTTCTCAGGATTGTGGATTCAAATGTGTGAAGGATGAGCCTAGATCAGCCAGTCCTGTTCCTGCGAATGGAGGTTGTTGTATAATCTGCCTAGTTAATTGACACTGCATTTAGCTATTGCTATAATTCCAACTATCCCTGATGTCCTAACTTCAATACTGTCAGGTTCCGAAGCAACACGATTTCTTGGTTCCAATCACAGTCCTTCAATTCCCAATCACTCTAATCTTGCCATAACAGTTGAACAAGACAAACCTTGTATGGTCTCTTCTACCGGGAGGGTTGTTGAAGATCAAAGTGATAGAAAAAAAAGGAACTTCGGTAATGCTTCAAGCCTTCAACCCTCTGTTTAAGTGCTATGTTTTTTCATGCTACTTCATTAGTTTCAGATGATGTACTATACAACTTTCCCCCTTTGGACTCATGATGTTTGCTCTGTGTTTATCAGAGCAAAAAGATCACAAAGAATTGATTCCATTAGTACGTAGTAGCTCTTCCCCGCTGACTGCCCAGTGCGATGCTAGTTATTATTTTTCTAGTCAGCACAAGAGAAAACTGAGAAGCCTTGCTCCATGTCCAACTAACAACCAGCTCTTTGTTACCAGGTATTGTTATATTAGAATGCTTATGAAAGAGTGCATAAATGCACATACATACGATAGGAACCAAATATATTGAAATATAAAAGATAACAGAATACAAGATAAGCCAAGTAATTTGAGGTATTTGGACACTCTCTTAAGCACTCTCACTCAAGCCTAAACCAACTAAATCAATGCCTACCCTCCTTTCTAACTTTTTTTTTTAATAACAAATCACCATAAGGTCCATAACAACTTCTCTATCTAATTATTAATCTACATCCAGTGCTCTAATAATATTCCTAATTCCATCCTAATGACACTCCTGTCAACATATTAATTGAAATTCTTTTTCCTCTTTTCTTTTAACAAGATGGAGGTTTTTTTTTTTTTTCTTGTTATGAAGGCCCTGCTTAGATTTCCATATGTATAATGTAAAGATGGTAAGCATCGGGGTTACTAAAGAATCTAACAAGTGCTTGATGTTGGGACTTATGTAGTGCTTTGGATGGAATGATCAACCTGTGGCAAGTTCAGTCCAAGGGGTAAGTCTTGCTCCTTTATTTTCCTACTTTTGTTTAAATGAATCCAAACTGAATATTGGGACTATAAAAACCTTTTTAGATCTTCAAATATTTGAATGCATACCGTTGAATATTTAAACTCACCATATTTAACTACATTTTTTAATTTATTATGGTTATTGAGATTTTAAGATTGGACTGAAAGTGATGGTAAATCGTAATCCTTGTTTTCAAAAAATAGGTTAAAAAACTATTACTAATTCTATATTATAGTAAAGGCTAAACCATTGATTGCGTCCTTGAGTACTAAAGAATTGGTTAACTCAGAAAACTATCATGTTATAGACTGTACACGTTTGGTTCTCCAGTACTTAACCTATGACTAATTTTCATTAATGATATTAGTAGTTAATTGAATAAGGCTAACAGAAATATGCTATTATCCAGTCTTTCTTACCTATCCAAAAATGCTTAATGTCAATCCTGTTTTAGAATAACATAGTCGATAAATATAATATGATGGGTTTTAATCTCATATTATTTAATTTACTTTGGTTATTGTCAAAAGCTTTATTTGGTTTATTCTGGCCTAGAAGAAAGTCTCTCTAGCTGACAATTCCTTTTAGATGCCAATGAAAATATTATTTTGATTACCTAACCATATTACTAGCGTGATGCTCCTTTTTTTTTTAAAAAAAAGGATCCCCATGTTGGAGTTTAAGGTTCTAGCGTGATGCTCCTTTTAGTGGGTCTTACATATGAATCCCCTTTTTGGAGTTTAAGGCTCTTTTTTTTGCTCCCTATTTCATTCTGTTTTCCATTTTCAGGTCATTTGCCTCTCTTCTTTGTACTACTGACTGTATGTCTCAAGAGCAGAGGAGATGGCCTGAAGATATATCATGGCACCCAGAGGGAAATAGCCTATTTTCCGTGTACAGCGCTGATGGTGGAGGCTCTCAGATATCGATCTTGAACTTCAATAGGACTAAAGAGGTAAGTAATACTTATCATTCTATTTCAAGTATGCTTGGTCCTTTGTGATACAAATCATTGGTGCCAAAAAATATGATGTATCCTCAAAAGAATATTATTCTATAACATCAAAGTTTGAGGTAGTTTTTTCTAAGTTTATATCAATTGACAGAGGGCCTGTGTGACTTTCTTAGAGGATCGGCCTCACGTTAAAGGAATTATCAACAACATTAGTTTCTTGCCTTGGGAATCTGTCCCATTCATTACTGGTGGCAGTGACCATGCTGTCGTTCTATGGAATATGAAAGATAAAGAGAACACATGGAAACCAGAGCTGTTGCACAGAAACCTGCATTCTTCAGCTGTCATGGGTGTCTCTGGGATGCAGAAGAAGCAAATCGTACTTTCTGCTGGTGCAGACAAGAGAATCCTTGGTTTTGATGTTCAAGTAGGAAGCTTACACTTCAAGCATCAACTAGAGAGTAAATGTATGAGTGTCTTGCCGAATCCGTGTGACTTTAACCTGTTCATGGTCCAAACAGGGTGAGAAGCAACTATTTATGTATTCAATATTTAGAAACACACGCATAGCTTTTTTCTCAATGGTTTTTTCTTGCTTGTTAAAATGTAAATATGTTTTCAATTGACAAACTTGACTTCTAAAAAAGAAACAAGTACCCACGCCAATAGTGGAACTAATAGGAATTGACTATTTCTTCCAAAAAAAATAAAAAGAGAAAGAGATTAAAAAAAAAAAAAAAAAGAACTGACTATATTCAACGCCATAATGAAGTACTACCCCTGAATGTACTTATTTTAATTTAGTAGATATTGATGATCCCTGGACTGACTAATTCTCATGTATGAGACATTGGTTTGTAAAACATTTAATGGTGCTTTTACTATGCAGGAGTCCGGAAAAGCAACTTCGGTTATGTGACATTAGATTGGAACAAAAAGAAGTCCACAGTTTTGGGTGGAAGCAAGAAAGCAGTGAATCTCAATCAGCTCTGATAAATCAGGCCTGGTCTCCTGATGGTTTACACCTAACATCTGGTTCGGCAGATCCTGTAATTCATGTTTTTGATATTAGATATAATTCTCACATGCCATCTCAATCAATTAAAGCTCATCAGAAACGTGTCTTCAAAGCTGTTTGGCTCCGTTCTCTTCCACTTCTTATTTCCATTTCATCCGACCTGAACATTGGACTGCACAAAATGGTATAGATATTCCATGTTCAAGTTATTAATGCGACTTGCTAACTGCCATAAGAGGTCATCTCATGTCGCTGGACATCGTTTGCGCCTTCTCAAAGCAACTCACCGAGAGGTAATTTGGATACAAGAAAAATGTGCCTGAGTTTGTTGTCTGCAAGAGTGCAGTGGACAGTAATCTGGTTATGATGACAAACCATAAAGACCTGACGAAGTTGTGGCTTGTGACTTGGTAGTTTTGTGGGGACATGTAAATTTGTTGATCTTATTGCCCTACATGTATTTTATACTAACTATGCACAGATACAAATGTTTCATTCTGTTAGAGGGCTCTGAAAAGCTTGAGAGGGGATTAGAACGGTTGTTCCTCGTCCTCCCTCCTTGCCAAGTAAAATAGTTCTGAAAAGCTAACTAGTAGGCATCCACGAGAACATATCCTTTATGCCTGATAAAGTTAAATTTTGACTAGAGATTTGTTATTGAACGCATAATAGTAGATCAAGTATTATCAATACTCTCAAGACTGAAGGGTGATATGTGATATTTTGGTTCAGTTCTCAAATCTAGTATTATCAATACTAGAGATTTGGAAAGATGGATATATCATGTCTTTAACTAATTACCATAAACCATGAGATGAAGAAGGGTGCAAATAATATGTGCACATTCCACTAGAGTATGATTTAAGCTGTTGTAATTGATTTGTCGTTCTTGACTAAAATTTTCATAATTGAGTGTCATTGTGTTTTTCTGTGTTTTTAATTCCTGGATTTGACCCCTCCCCTCAAGAGTTTAGATAGCGGGATGCTTTGTTGTATGGCTTATAGTTGCAATGTCAAACTTTAATGCTATTGGTAAATTATTTGATCATTTTGTTGAACAGGAAGAGAAGCAAAGAGCTATGCTTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACGAGTGTATCACTGGTACGCCAGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGCCTATCAAACTGTGTCCAACGCTACTGCTCATCATCATTAAACGATTCCAAAACAGTTAATGGATCTATTGTTACATTCAATCTGAAAGAAAAAGGGTCTGAACTTCTGAAAATATTGTGTTCGCTTTTTAAAGTTGATGCATTACCCAAATCAGATTGTTTTACATCTTGA ATGATCAACCTGTGGCAAGTTCAGTCCAAGGGGTCATTTGCCTCTCTTCTTTGTACTACTGACTGTATGTCTCAAGAGCAGAGGAGATGGCCTGAAGATATATCATGGCACCCAGAGGGAAATAGCCTATTTTCCGTGTACAGCGCTGATGGTGGAGGCTCTCAGATATCGATCTTGAACTTCAATAGGACTAAAGAGAGGGCCTGTGTGACTTTCTTAGAGGATCGGCCTCACGTTAAAGGAATTATCAACAACATTAGTTTCTTGCCTTGGGAATCTGTCCCATTCATTACTGGTGGCAGTGACCATGCTGTCGTTCTATGGAATATGAAAGATAAAGAGAACACATGGAAACCAGAGCTGTTGCACAGAAACCTGCATTCTTCAGCTGTCATGGGTGTCTCTGGGATGCAGAAGAAGCAAATCGTACTTTCTGCTGGTGCAGACAAGAGAATCCTTGGTTTTGATGTTCAAGTAGGAAGCTTACACTTCAAGCATCAACTAGAGAGTAAATGTATGAGTGTCTTGCCGAATCCGTGTGACTTTAACCTGAGTCCGGAAAAGCAACTTCGGTTATGTGACATTAGATTGGAACAAAAAGAAGTCCACAGTTTTGGGTGGAAGCAAGAAAGCAGTGAATCTCAATCAGCTCTGATAAATCAGGCCTGGTCTCCTGATGGTTTACACCTAACATCTGGTTCGGCAGATCCTGTAATTCATGTTTTTGATATTAGATATAATTCTCACATGCCATCTCAATCAATTAAAGCTCATCAGAAACTGGACAGTAATCTGGTTATGATGACAAACCATAAAGACCTGACGAAGTTGTGGCTTGTGACTTGGAAGAGAAGCAAAGAGCTATGCTTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACGAGTGTATCACTGGTACGCCAGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGCCTATCAAACTGTGTCCAACGCTACTGCTCATCATCATTAAACGATTCCAAAACAGTTAATGGATCTATTGTTACATTCAATCTGAAAGAAAAAGGGTCTGAACTTCTGAAAATATTGTGTTCGCTTTTTAAAGTTGATGCATTACCCAAATCAGATTGTTTTACATCTTGA ATGATCAACCTGTGGCAAGTTCAGTCCAAGGGGTCATTTGCCTCTCTTCTTTGTACTACTGACTGTATGTCTCAAGAGCAGAGGAGATGGCCTGAAGATATATCATGGCACCCAGAGGGAAATAGCCTATTTTCCGTGTACAGCGCTGATGGTGGAGGCTCTCAGATATCGATCTTGAACTTCAATAGGACTAAAGAGAGGGCCTGTGTGACTTTCTTAGAGGATCGGCCTCACGTTAAAGGAATTATCAACAACATTAGTTTCTTGCCTTGGGAATCTGTCCCATTCATTACTGGTGGCAGTGACCATGCTGTCGTTCTATGGAATATGAAAGATAAAGAGAACACATGGAAACCAGAGCTGTTGCACAGAAACCTGCATTCTTCAGCTGTCATGGGTGTCTCTGGGATGCAGAAGAAGCAAATCGTACTTTCTGCTGGTGCAGACAAGAGAATCCTTGGTTTTGATGTTCAAGTAGGAAGCTTACACTTCAAGCATCAACTAGAGAGTAAATGTATGAGTGTCTTGCCGAATCCGTGTGACTTTAACCTGAGTCCGGAAAAGCAACTTCGGTTATGTGACATTAGATTGGAACAAAAAGAAGTCCACAGTTTTGGGTGGAAGCAAGAAAGCAGTGAATCTCAATCAGCTCTGATAAATCAGGCCTGGTCTCCTGATGGTTTACACCTAACATCTGGTTCGGCAGATCCTGTAATTCATGTTTTTGATATTAGATATAATTCTCACATGCCATCTCAATCAATTAAAGCTCATCAGAAACTGGACAGTAATCTGGTTATGATGACAAACCATAAAGACCTGACGAAGTTGTGGCTTGTGACTTGGAAGAGAAGCAAAGAGCTATGCTTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACGAGTGTATCACTGGTACGCCAGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGCCTATCAAACTGTGTCCAACGCTACTGCTCATCATCATTAAACGATTCCAAAACAGTTAATGGATCTATTGTTACATTCAATCTGAAAGAAAAAGGGTCTGAACTTCTGAAAATATTGTGTTCGCTTTTTAAAGTTGATGCATTACCCAAATCAGATTGTTTTACATCTTGA MINLWQVQSKGSFASLLCTTDCMSQEQRRWPEDISWHPEGNSLFSVYSADGGGSQISILNFNRTKERACVTFLEDRPHVKGIINNISFLPWESVPFITGGSDHAVVLWNMKDKENTWKPELLHRNLHSSAVMGVSGMQKKQIVLSAGADKRILGFDVQVGSLHFKHQLESKCMSVLPNPCDFNLSPEKQLRLCDIRLEQKEVHSFGWKQESSESQSALINQAWSPDGLHLTSGSADPVIHVFDIRYNSHMPSQSIKAHQKLDSNLVMMTNHKDLTKLWLVTWKRSKELCFAEMVAKLTSVCWDECITGTPGSKFSSSESNCLSNCVQRYCSSSLNDSKTVNGSIVTFNLKEKGSELLKILCSLFKVDALPKSDCFTS Homology
BLAST of Spg009977.1 vs. NCBI nr
Match: XP_022928844.1 (uncharacterized protein LOC111435636 [Cucurbita moschata]) HSP 1 Score: 500.0 bits (1286), Expect = 1.8e-137 Identity = 237/266 (89.10%), Postives = 251/266 (94.36%), Query Frame = 0
BLAST of Spg009977.1 vs. NCBI nr
Match: XP_023529525.1 (uncharacterized protein LOC111792354 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 498.8 bits (1283), Expect = 4.1e-137 Identity = 236/266 (88.72%), Postives = 251/266 (94.36%), Query Frame = 0
BLAST of Spg009977.1 vs. NCBI nr
Match: KAG6587393.1 (hypothetical protein SDJN03_15958, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021377.1 hypothetical protein SDJN02_15102 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 498.0 bits (1281), Expect = 6.9e-137 Identity = 235/266 (88.35%), Postives = 251/266 (94.36%), Query Frame = 0
BLAST of Spg009977.1 vs. NCBI nr
Match: XP_038880725.1 (uncharacterized protein LOC120072326 isoform X3 [Benincasa hispida]) HSP 1 Score: 495.7 bits (1275), Expect = 3.4e-136 Identity = 238/266 (89.47%), Postives = 251/266 (94.36%), Query Frame = 0
BLAST of Spg009977.1 vs. NCBI nr
Match: XP_038880723.1 (uncharacterized protein LOC120072326 isoform X1 [Benincasa hispida]) HSP 1 Score: 495.7 bits (1275), Expect = 3.4e-136 Identity = 238/266 (89.47%), Postives = 251/266 (94.36%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy Swiss-Prot
Match: Q9XGY4 (Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thaliana OX=3702 GN=TIM8 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.0e-10 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy Swiss-Prot
Match: P0CR95 (Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=TIM8 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy Swiss-Prot
Match: P0CR94 (Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=TIM8 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy Swiss-Prot
Match: P0CS37 (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=HAT2 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05 Identity = 34/128 (26.56%), Postives = 60/128 (46.88%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy Swiss-Prot
Match: P0CS36 (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=HAT2 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05 Identity = 34/128 (26.56%), Postives = 60/128 (46.88%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy TrEMBL
Match: A0A6J1EM12 (uncharacterized protein LOC111435636 OS=Cucurbita moschata OX=3662 GN=LOC111435636 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 8.8e-138 Identity = 237/266 (89.10%), Postives = 251/266 (94.36%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy TrEMBL
Match: A0A6J1C2U7 (uncharacterized protein LOC111006933 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006933 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.8e-133 Identity = 234/266 (87.97%), Postives = 247/266 (92.86%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy TrEMBL
Match: A0A6J1BZL7 (uncharacterized protein LOC111006933 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006933 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.8e-133 Identity = 234/266 (87.97%), Postives = 247/266 (92.86%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy TrEMBL
Match: A0A6J1C0F9 (uncharacterized protein LOC111006933 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111006933 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.8e-133 Identity = 234/266 (87.97%), Postives = 247/266 (92.86%), Query Frame = 0
BLAST of Spg009977.1 vs. ExPASy TrEMBL
Match: A0A6J1BYM9 (uncharacterized protein LOC111006933 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111006933 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.8e-133 Identity = 234/266 (87.97%), Postives = 247/266 (92.86%), Query Frame = 0
BLAST of Spg009977.1 vs. TAIR 10
Match: AT5G50970.1 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 395.6 bits (1015), Expect = 4.5e-110 Identity = 187/267 (70.04%), Postives = 221/267 (82.77%), Query Frame = 0
BLAST of Spg009977.1 vs. TAIR 10
Match: AT5G19920.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 325.5 bits (833), Expect = 5.7e-89 Identity = 152/265 (57.36%), Postives = 197/265 (74.34%), Query Frame = 0
BLAST of Spg009977.1 vs. TAIR 10
Match: AT5G50810.1 (translocase inner membrane subunit 8 ) HSP 1 Score: 69.3 bits (168), Expect = 7.4e-12 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Spg009977.1 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 2.5e-04 Identity = 32/146 (21.92%), Postives = 61/146 (41.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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