Spg008760.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg008760.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChloride channel protein 1
Locationscaffold10: 32448594 .. 32449590 (+)
Sequence length510
RNA-Seq ExpressionSpg008760.1
SyntenySpg008760.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGTAATTCTTCTTCCAGTTCTTCAGATTTTCTAATTCCCAAGCGGAAGAGTTCCAATTCCAATTGCTTTTTTGCTTTTTCTCTACTCCAATCGAACTTCAATGATTTCCCTCTCCTAATTTTTCACAAAGCATATAGGTTTTGCTTTCGAAGATAATGACGTGTTGTTCAACAGGAACAATTGGAGGTTTTATACCAGTTTCCCTGAATTTTGTACTGTATCTTTTGGGGTTATTGTTATTGGTTAAACTGGGAGGAAGGGAGTTTTTTGTGCTTCCAGATGTTGTTGAGTGGCTTTCTAAGGATTAGCGATATTGTGTTCGTACTGTGTTTTTGGTTTACTGTGGTGTTTTGCTAGTTCGACCGGCAACTACTTGGTTTTAGGGAATGCTTTCACTGTTGATTTTATTACCTTGGAACTAAATATTTGGTGTTTTTAGCTCTGTTTTGTGGTGTGTGTAATTTATTTCCTTGTGATTGGCACTGTAGGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA

mRNA sequence

ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA

Coding sequence (CDS)

ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA

Protein sequence

MSLVDYASSDDDVPAAEEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGRFVPICSFLRFLLFMLGFGFT
Homology
BLAST of Spg008760.1 vs. NCBI nr
Match: XP_023517928.1 (uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 3.2e-57
Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAA---EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
           MSLVDYASSDDD  AA   EEE+NR+KPE+   +EPQFPNQEPR QS PVNQPI+KP +P
Sbjct: 1   MSLVDYASSDDDETAAAEEEEEQNRKKPEDRTTEEPQFPNQEPRSQSHPVNQPILKPKQP 60

Query: 61  SESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSL 120
           SE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGSSL
Sbjct: 61  SETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGSSL 120

Query: 121 PRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           PRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 PRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 152

BLAST of Spg008760.1 vs. NCBI nr
Match: KAG6601958.1 (hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032653.1 hypothetical protein SDJN02_06703 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.9 bits (590), Expect = 4.1e-57
Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAAEEEE---NRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
           MSLVDYASSDDD  AAEEEE   NR+KPE+   +EPQFPN+EPR QS PVNQPI+KP +P
Sbjct: 1   MSLVDYASSDDDETAAEEEEEEQNRKKPEDRTTEEPQFPNREPRSQSHPVNQPILKPKQP 60

Query: 61  SESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSL 120
           SE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGSSL
Sbjct: 61  SETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGSSL 120

Query: 121 PRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           PRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 PRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 152

BLAST of Spg008760.1 vs. NCBI nr
Match: XP_038874519.1 (uncharacterized protein LOC120067146 [Benincasa hispida])

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-56
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAAEEEE-----NRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPN 60
           MSLVDYASSDDDVPAAEEEE     NR+K EN  V EPQFP  EPRP+SPPVNQPI+KPN
Sbjct: 1   MSLVDYASSDDDVPAAEEEEEVAEDNRKKSENRTVAEPQFPKHEPRPKSPPVNQPILKPN 60

Query: 61  RPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGS 120
           +  E+ EE SVPS+ELPDASLLLNSP+SSSLF+GSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61  QQFETKEEPSVPSVELPDASLLLNSPSSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           SLPRSKVPRSSLPHSKNVPDT G LLVPPQLTGR
Sbjct: 121 SLPRSKVPRSSLPHSKNVPDTSGSLLVPPQLTGR 154

BLAST of Spg008760.1 vs. NCBI nr
Match: XP_022990875.1 (uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 6.0e-56
Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAA------EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKP 60
           MSLVDYASSDDD  AA      E+++NR+KPE++   EPQFPNQEPR QS PVNQPI+KP
Sbjct: 1   MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60

Query: 61  NRPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLG 120
            +PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLG
Sbjct: 61  KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120

Query: 121 SSLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           SSLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 155

BLAST of Spg008760.1 vs. NCBI nr
Match: XP_022964179.1 (uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata])

HSP 1 Score: 227.6 bits (579), Expect = 7.8e-56
Identity = 127/154 (82.47%), Postives = 139/154 (90.26%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAA-----EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPN 60
           MSLVDYASSDDD  AA     EEE+NR+KPE++   EPQFPNQEPR QS PVNQ I+KP 
Sbjct: 1   MSLVDYASSDDDETAAAEEEEEEEQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQSILKPK 60

Query: 61  RPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGS 120
           +PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61  QPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           SLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 154

BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A6J1JRA7 (uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487632 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.9e-56
Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAA------EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKP 60
           MSLVDYASSDDD  AA      E+++NR+KPE++   EPQFPNQEPR QS PVNQPI+KP
Sbjct: 1   MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60

Query: 61  NRPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLG 120
            +PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLG
Sbjct: 61  KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120

Query: 121 SSLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           SSLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 155

BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A6J1HMD3 (uncharacterized protein LOC111464275 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464275 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.8e-56
Identity = 127/154 (82.47%), Postives = 139/154 (90.26%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAA-----EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPN 60
           MSLVDYASSDDD  AA     EEE+NR+KPE++   EPQFPNQEPR QS PVNQ I+KP 
Sbjct: 1   MSLVDYASSDDDETAAAEEEEEEEQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQSILKPK 60

Query: 61  RPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGS 120
           +PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61  QPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           SLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 154

BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A6J1CIF3 (WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=3673 GN=LOC111011781 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 9.3e-55
Identity = 122/150 (81.33%), Postives = 137/150 (91.33%), Query Frame = 0

Query: 1   MSLVDYASSDDDVP-AAEEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRPSE 60
           MSLVDYASSDDDVP AAEEE+N ++PEN+ V+EPQFP  EP+PQ PP+NQPI+KPN+P E
Sbjct: 1   MSLVDYASSDDDVPAAAEEEQNPEQPENHRVEEPQFPKHEPQPQPPPLNQPILKPNQPLE 60

Query: 61  SNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSLPR 120
           +N +SSV S+ELPDASLLLNSPTSSSLF GSDHSSRVAAAMAANASRKRETNV  S+LPR
Sbjct: 61  TNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVSASALPR 120

Query: 121 SKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           SKVPRS+LPHSKNVPDT+GR LVPPQLTGR
Sbjct: 121 SKVPRSTLPHSKNVPDTLGRSLVPPQLTGR 150

BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A1S3CP27 (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.5e-54
Identity = 127/153 (83.01%), Postives = 136/153 (88.89%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAA---EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
           MSLVDYASSD+DVPAA   E+E+NR + EN+ V EPQ P  EPRPQSPPVNQPIVKPN+ 
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  SESNEE-SSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSS 120
            E+NEE SSVP +ELPDASLLLNS TSSSLF+GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           LPRSKVPRSSLPHSKNVPDT G LLVPPQLTGR
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGR 153

BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A5A7VCK3 (Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00410 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0

Query: 1   MSLVDYASSDDDVPAA---EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
           MSLVDYASSD+DVPAA   E+E+NR + E + V EPQ P  EPRPQSPPVNQPIVKPN+ 
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSEKHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  SESNEE-SSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSS 120
            E+NEE SSVP +ELPDASLLLNS TSSSLF+GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
           LPRSKVPRSSLPHSKNVPDT G LLVPPQLTGR
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGR 153

BLAST of Spg008760.1 vs. TAIR 10
Match: AT5G13470.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 76/152 (50.00%), Postives = 92/152 (60.53%), Query Frame = 0

Query: 1   MSLVDY--ASSDDDVPAAEEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRPS 60
           MSLVDY  +SSDDDV AAEE     KP          P  + R  SP  + P   P R  
Sbjct: 1   MSLVDYDDSSSDDDVLAAEE-----KP---------LPQTQKRLVSPAQSFP---PKRQR 60

Query: 61  ESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSLP 120
              +ES     +LPDA LLL SPT + +  G DH+S VAAAMA +A RKR+ +   SSLP
Sbjct: 61  FEQDESVE---KLPDALLLLESPTLAQV-TGGDHASVVAAAMAESALRKRDLSGNASSLP 120

Query: 121 -RSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
            R K+PR +LPHSKN P+T+G +LVPPQL GR
Sbjct: 121 RRPKLPRGNLPHSKNYPETLGNVLVPPQLKGR 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023517928.13.2e-5784.21uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6601958.14.1e-5784.21hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038874519.11.2e-5683.77uncharacterized protein LOC120067146 [Benincasa hispida][more]
XP_022990875.16.0e-5681.29uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima][more]
XP_022964179.17.8e-5682.47uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JRA72.9e-5681.29uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HMD33.8e-5682.47uncharacterized protein LOC111464275 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1CIF39.3e-5581.33WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=... [more]
A0A1S3CP273.5e-5483.01uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=... [more]
A0A5A7VCK31.8e-5382.35Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
Match NameE-valueIdentityDescription
AT5G13470.11.1e-1850.00unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..68
NoneNo IPR availablePANTHERPTHR33912:SF3OS01G0939400 PROTEINcoord: 1..150
IPR040381Uncharacterized protein At4g14450-likePANTHERPTHR33912OS01G0939400 PROTEINcoord: 1..150

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg008760Spg008760gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg008760.1-cdsSpg008760.1-cds-scaffold10:32448594..32448739CDS
Spg008760.1-cdsSpg008760.1-cds-scaffold10:32449227..32449590CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg008760.1Spg008760.1-proteinpolypeptide