Spg008760.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGTAATTCTTCTTCCAGTTCTTCAGATTTTCTAATTCCCAAGCGGAAGAGTTCCAATTCCAATTGCTTTTTTGCTTTTTCTCTACTCCAATCGAACTTCAATGATTTCCCTCTCCTAATTTTTCACAAAGCATATAGGTTTTGCTTTCGAAGATAATGACGTGTTGTTCAACAGGAACAATTGGAGGTTTTATACCAGTTTCCCTGAATTTTGTACTGTATCTTTTGGGGTTATTGTTATTGGTTAAACTGGGAGGAAGGGAGTTTTTTGTGCTTCCAGATGTTGTTGAGTGGCTTTCTAAGGATTAGCGATATTGTGTTCGTACTGTGTTTTTGGTTTACTGTGGTGTTTTGCTAGTTCGACCGGCAACTACTTGGTTTTAGGGAATGCTTTCACTGTTGATTTTATTACCTTGGAACTAAATATTTGGTGTTTTTAGCTCTGTTTTGTGGTGTGTGTAATTTATTTCCTTGTGATTGGCACTGTAGGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA MSLVDYASSDDDVPAAEEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGRFVPICSFLRFLLFMLGFGFT Homology
BLAST of Spg008760.1 vs. NCBI nr
Match: XP_023517928.1 (uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232.3 bits (591), Expect = 3.2e-57 Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0
BLAST of Spg008760.1 vs. NCBI nr
Match: KAG6601958.1 (hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032653.1 hypothetical protein SDJN02_06703 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.9 bits (590), Expect = 4.1e-57 Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0
BLAST of Spg008760.1 vs. NCBI nr
Match: XP_038874519.1 (uncharacterized protein LOC120067146 [Benincasa hispida]) HSP 1 Score: 230.3 bits (586), Expect = 1.2e-56 Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of Spg008760.1 vs. NCBI nr
Match: XP_022990875.1 (uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima]) HSP 1 Score: 228.0 bits (580), Expect = 6.0e-56 Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0
BLAST of Spg008760.1 vs. NCBI nr
Match: XP_022964179.1 (uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata]) HSP 1 Score: 227.6 bits (579), Expect = 7.8e-56 Identity = 127/154 (82.47%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A6J1JRA7 (uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487632 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.9e-56 Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0
BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A6J1HMD3 (uncharacterized protein LOC111464275 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464275 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.8e-56 Identity = 127/154 (82.47%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A6J1CIF3 (WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=3673 GN=LOC111011781 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 9.3e-55 Identity = 122/150 (81.33%), Postives = 137/150 (91.33%), Query Frame = 0
BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A1S3CP27 (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.5e-54 Identity = 127/153 (83.01%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of Spg008760.1 vs. ExPASy TrEMBL
Match: A0A5A7VCK3 (Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00410 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53 Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of Spg008760.1 vs. TAIR 10
Match: AT5G13470.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18 Identity = 76/152 (50.00%), Postives = 92/152 (60.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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