Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGTAATTCTTCTTCCAGTTCTTCAGATTTTCTAATTCCCAAGCGGAAGAGTTCCAATTCCAATTGCTTTTTTGCTTTTTCTCTACTCCAATCGAACTTCAATGATTTCCCTCTCCTAATTTTTCACAAAGCATATAGGTTTTGCTTTCGAAGATAATGACGTGTTGTTCAACAGGAACAATTGGAGGTTTTATACCAGTTTCCCTGAATTTTGTACTGTATCTTTTGGGGTTATTGTTATTGGTTAAACTGGGAGGAAGGGAGTTTTTTGTGCTTCCAGATGTTGTTGAGTGGCTTTCTAAGGATTAGCGATATTGTGTTCGTACTGTGTTTTTGGTTTACTGTGGTGTTTTGCTAGTTCGACCGGCAACTACTTGGTTTTAGGGAATGCTTTCACTGTTGATTTTATTACCTTGGAACTAAATATTTGGTGTTTTTAGCTCTGTTTTGTGGTGTGTGTAATTTATTTCCTTGTGATTGGCACTGTAGGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA
mRNA sequence
ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA
Coding sequence (CDS)
ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTGCCGGCGGCGGAGGAGGAGGAGAATCGGCAGAAACCGGAAAACAACGCCGTCGATGAGCCTCAATTCCCCAACCAGGAGCCGAGGCCTCAATCTCCTCCCGTCAACCAGCCCATTGTTAAGCCAAATCGGCCATCTGAAAGTAATGAGGAGTCTTCTGTGCCTTCACTTGAGCTTCCTGATGCTTCCCTACTATTGAATTCTCCTACTTCTTCTAGTCTTTTTAATGGTAGCGATCACTCTTCTCGAGTCGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCCAGGAGTAAAGTTCCACGATCGAGCTTGCCTCATTCAAAGAATGTTCCAGATACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCCAATATGTTCTTTCCTTCGTTTCCTTTTGTTTATGCTAGGATTTGGATTCACTTAA
Protein sequence
MSLVDYASSDDDVPAAEEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGRFVPICSFLRFLLFMLGFGFT
Homology
BLAST of Spg008760 vs. NCBI nr
Match:
XP_023517928.1 (uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 232.3 bits (591), Expect = 3.2e-57
Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAA---EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
MSLVDYASSDDD AA EEE+NR+KPE+ +EPQFPNQEPR QS PVNQPI+KP +P
Sbjct: 1 MSLVDYASSDDDETAAAEEEEEQNRKKPEDRTTEEPQFPNQEPRSQSHPVNQPILKPKQP 60
Query: 61 SESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSL 120
SE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGSSL
Sbjct: 61 SETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGSSL 120
Query: 121 PRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
PRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 PRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 152
BLAST of Spg008760 vs. NCBI nr
Match:
KAG6601958.1 (hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032653.1 hypothetical protein SDJN02_06703 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 231.9 bits (590), Expect = 4.1e-57
Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAAEEEE---NRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
MSLVDYASSDDD AAEEEE NR+KPE+ +EPQFPN+EPR QS PVNQPI+KP +P
Sbjct: 1 MSLVDYASSDDDETAAEEEEEEQNRKKPEDRTTEEPQFPNREPRSQSHPVNQPILKPKQP 60
Query: 61 SESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSL 120
SE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGSSL
Sbjct: 61 SETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGSSL 120
Query: 121 PRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
PRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 PRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 152
BLAST of Spg008760 vs. NCBI nr
Match:
XP_038874519.1 (uncharacterized protein LOC120067146 [Benincasa hispida])
HSP 1 Score: 230.3 bits (586), Expect = 1.2e-56
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAAEEEE-----NRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPN 60
MSLVDYASSDDDVPAAEEEE NR+K EN V EPQFP EPRP+SPPVNQPI+KPN
Sbjct: 1 MSLVDYASSDDDVPAAEEEEEVAEDNRKKSENRTVAEPQFPKHEPRPKSPPVNQPILKPN 60
Query: 61 RPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGS 120
+ E+ EE SVPS+ELPDASLLLNSP+SSSLF+GSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61 QQFETKEEPSVPSVELPDASLLLNSPSSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120
Query: 121 SLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
SLPRSKVPRSSLPHSKNVPDT G LLVPPQLTGR
Sbjct: 121 SLPRSKVPRSSLPHSKNVPDTSGSLLVPPQLTGR 154
BLAST of Spg008760 vs. NCBI nr
Match:
XP_022990875.1 (uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima])
HSP 1 Score: 228.0 bits (580), Expect = 6.0e-56
Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAA------EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKP 60
MSLVDYASSDDD AA E+++NR+KPE++ EPQFPNQEPR QS PVNQPI+KP
Sbjct: 1 MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60
Query: 61 NRPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLG 120
+PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLG
Sbjct: 61 KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120
Query: 121 SSLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
SSLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 155
BLAST of Spg008760 vs. NCBI nr
Match:
XP_022964179.1 (uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata])
HSP 1 Score: 227.6 bits (579), Expect = 7.8e-56
Identity = 127/154 (82.47%), Postives = 139/154 (90.26%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAA-----EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPN 60
MSLVDYASSDDD AA EEE+NR+KPE++ EPQFPNQEPR QS PVNQ I+KP
Sbjct: 1 MSLVDYASSDDDETAAAEEEEEEEQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQSILKPK 60
Query: 61 RPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGS 120
+PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61 QPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGS 120
Query: 121 SLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
SLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 154
BLAST of Spg008760 vs. ExPASy TrEMBL
Match:
A0A6J1JRA7 (uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487632 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 2.9e-56
Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAA------EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKP 60
MSLVDYASSDDD AA E+++NR+KPE++ EPQFPNQEPR QS PVNQPI+KP
Sbjct: 1 MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60
Query: 61 NRPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLG 120
+PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLG
Sbjct: 61 KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120
Query: 121 SSLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
SSLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 155
BLAST of Spg008760 vs. ExPASy TrEMBL
Match:
A0A6J1HMD3 (uncharacterized protein LOC111464275 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464275 PE=4 SV=1)
HSP 1 Score: 227.6 bits (579), Expect = 3.8e-56
Identity = 127/154 (82.47%), Postives = 139/154 (90.26%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAA-----EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPN 60
MSLVDYASSDDD AA EEE+NR+KPE++ EPQFPNQEPR QS PVNQ I+KP
Sbjct: 1 MSLVDYASSDDDETAAAEEEEEEEQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQSILKPK 60
Query: 61 RPSESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGS 120
+PSE+NE+SSVPS+ELPDASLLLNSPTSSSL +GSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61 QPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGS 120
Query: 121 SLPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
SLPRSKVPRS+LPHSKNVP+TVGRLLVPPQLTGR
Sbjct: 121 SLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGR 154
BLAST of Spg008760 vs. ExPASy TrEMBL
Match:
A0A6J1CIF3 (WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=3673 GN=LOC111011781 PE=4 SV=1)
HSP 1 Score: 223.0 bits (567), Expect = 9.3e-55
Identity = 122/150 (81.33%), Postives = 137/150 (91.33%), Query Frame = 0
Query: 1 MSLVDYASSDDDVP-AAEEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRPSE 60
MSLVDYASSDDDVP AAEEE+N ++PEN+ V+EPQFP EP+PQ PP+NQPI+KPN+P E
Sbjct: 1 MSLVDYASSDDDVPAAAEEEQNPEQPENHRVEEPQFPKHEPQPQPPPLNQPILKPNQPLE 60
Query: 61 SNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSLPR 120
+N +SSV S+ELPDASLLLNSPTSSSLF GSDHSSRVAAAMAANASRKRETNV S+LPR
Sbjct: 61 TNGDSSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVSASALPR 120
Query: 121 SKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
SKVPRS+LPHSKNVPDT+GR LVPPQLTGR
Sbjct: 121 SKVPRSTLPHSKNVPDTLGRSLVPPQLTGR 150
BLAST of Spg008760 vs. ExPASy TrEMBL
Match:
A0A1S3CP27 (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 3.5e-54
Identity = 127/153 (83.01%), Postives = 136/153 (88.89%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAA---EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
MSLVDYASSD+DVPAA E+E+NR + EN+ V EPQ P EPRPQSPPVNQPIVKPN+
Sbjct: 1 MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60
Query: 61 SESNEE-SSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSS 120
E+NEE SSVP +ELPDASLLLNS TSSSLF+GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61 FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
Query: 121 LPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
LPRSKVPRSSLPHSKNVPDT G LLVPPQLTGR
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGR 153
BLAST of Spg008760 vs. ExPASy TrEMBL
Match:
A0A5A7VCK3 (Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00410 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0
Query: 1 MSLVDYASSDDDVPAA---EEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRP 60
MSLVDYASSD+DVPAA E+E+NR + E + V EPQ P EPRPQSPPVNQPIVKPN+
Sbjct: 1 MSLVDYASSDEDVPAAVEEEKEDNRNQSEKHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60
Query: 61 SESNEE-SSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSS 120
E+NEE SSVP +ELPDASLLLNS TSSSLF+GSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61 FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
Query: 121 LPRSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
LPRSKVPRSSLPHSKNVPDT G LLVPPQLTGR
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGR 153
BLAST of Spg008760 vs. TAIR 10
Match:
AT5G13470.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 76/152 (50.00%), Postives = 92/152 (60.53%), Query Frame = 0
Query: 1 MSLVDY--ASSDDDVPAAEEEENRQKPENNAVDEPQFPNQEPRPQSPPVNQPIVKPNRPS 60
MSLVDY +SSDDDV AAEE KP P + R SP + P P R
Sbjct: 1 MSLVDYDDSSSDDDVLAAEE-----KP---------LPQTQKRLVSPAQSFP---PKRQR 60
Query: 61 ESNEESSVPSLELPDASLLLNSPTSSSLFNGSDHSSRVAAAMAANASRKRETNVLGSSLP 120
+ES +LPDA LLL SPT + + G DH+S VAAAMA +A RKR+ + SSLP
Sbjct: 61 FEQDESVE---KLPDALLLLESPTLAQV-TGGDHASVVAAAMAESALRKRDLSGNASSLP 120
Query: 121 -RSKVPRSSLPHSKNVPDTVGRLLVPPQLTGR 150
R K+PR +LPHSKN P+T+G +LVPPQL GR
Sbjct: 121 RRPKLPRGNLPHSKNYPETLGNVLVPPQLKGR 131
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023517928.1 | 3.2e-57 | 84.21 | uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAG6601958.1 | 4.1e-57 | 84.21 | hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038874519.1 | 1.2e-56 | 83.77 | uncharacterized protein LOC120067146 [Benincasa hispida] | [more] |
XP_022990875.1 | 6.0e-56 | 81.29 | uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima] | [more] |
XP_022964179.1 | 7.8e-56 | 82.47 | uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JRA7 | 2.9e-56 | 81.29 | uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1HMD3 | 3.8e-56 | 82.47 | uncharacterized protein LOC111464275 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1CIF3 | 9.3e-55 | 81.33 | WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=... | [more] |
A0A1S3CP27 | 3.5e-54 | 83.01 | uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=... | [more] |
A0A5A7VCK3 | 1.8e-53 | 82.35 | Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
Match Name | E-value | Identity | Description | |
AT5G13470.1 | 1.1e-18 | 50.00 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... | [more] |