Spg006191.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGATTTGAACTCCGCCGTCCACGGCGGCGCTTCTCGCTACGCCGATCAATTTCTCGGATCCGAGCTCCAACTTCAATCCGATCCCAACAATTCGCCGGAAAGTCACCGGCAGAAGCTCAATCCTCCCGACTCAACCACCAACACTAGCGGCGGTTCGTCGTCCACGCGCCGCCCTCGCGGCCGCCCCGCCGGCTCCAAGAACAAGCCGAAGCCGCCGGTGATCATTACACGTGACAGCCCCAACGCTCTGAGATCGCACGTGCTGGAGGTCTCCACCGGCTCCGATGTGGTTGAAACAATCGCGAGTTACGCCACGCGCCGCCGCCACGGCGTTTGCATTCTCGCTGGCACTGGCGTCGTCACTAACGTCAACTTGCGCCAGCCGGCGGCGCCGTCAGGGACTGTTATGACGCTTCATGGCACATTTGAGATTGTGTCTCTGACCGGTACGTCATTGCCGCCGCCGGCGCCACCAGGTGCCGGCGGGCTGACGATATATTTGTCCGGCGGGCAAGGGCAAGTCGTCGGAGGAAGTGTTGTCGGGCCATTGACGGCTTCGGGTCCGGTTGTTTTGATGGTGGCGTCGTTCACCAATGCGGTGTATGATCGGCTGCCGCTAGACGAGGCGGAGCCACCGATTCAAGCCCAGAGATCCACGTCGCCGTGCTCAGATGTTACAGGTAAAGTCGACAACATCTCAATTTCATGGAAACATTGTTTAAAATAAAAAATAAAAAATAAAAAAAAAATCCTCGTTATTTATATTACTGGGTTAGATTTTTCTTTTTTCTTTTTACTTCAATCGCAGGTAAAGATTCAAACTTCTAAATATTTTATGCCGATGATCCTCTAAAATACGATAAATGTTCCACATTTTCAAAACAAGGATTCTTTTGCTTGCGTCAGCATTCTAATAAAATTACCATTTTACTCTTTACTCTAAACTTGTTCTCTCTCTACTCTCACTACTCTCGCTCTCTCTCAAATTTTTCTCTCCAATCTCTCACTCTTTCTCCAATCTCGCTCTCGCCTCTCACTCTCACTTTCTCTCTCCAATTTCTCTCTCCAATCTCTTACTCTCTCTCATTTCTCTCTCCAATCTCGCTCTTGCTCTAAACTCTCACTCTTAAATGTCTTAAATGCCCGTTTTCATATAGAGTAAAATGGTAATTTTGCTAGGATGATGACATAAGCAAAAGGGCATATATCCTTATTTTGAAAATGTATGACATTTTTCATTTTGACCTCTCAAAATGGGTCCACGCAATTATCTCAAATATATATGTTAGAACAAAACTTGGCTACATATCGGTACATAGGGATCTACTTACATACTCCATTAAAATCTTGACAACTAAGAAAGAGGAGAGGAGTTTTTTCAAAAAAAAAGAAAGAGGAGAGGAGAAAATGAGAAAACTTTTTTCTCTCTCATAGTTGTCAAGATTTTAATGGTGGTATGCAGCTAAGTGTTTTTCTATATGTTAACAAGTTGAGTTATACTCAAGTAGCACCACATTAGTGCAGTTTGGATGTTAGTTTTTTTTTTTTTTTTTTTTTTTAATGTTTTTTTTATCAGTATTTTCATGATGGCAAACATTAACATAGTTTAATGACTTAATTTTTTCTTCTTCATATGTAATGTAATATTTTAACAAATTTGTAATTTCACGATATAATGAATATATGATTCCTCGACATGTCGACAAAAATTTAATACTCTAGTTATAGGTGGAGGTGGTCAGCTCGGAGGCGTCGGGAACTTCGACTTTGCCGGGGACGGTTACGGTTGGAGTGGCAATGCATCAAGGGCTCCGACGATACTGTGAAGAAAACTGAAAAAGCTTCAAGAAATTTGGCTACACAATGTGTTTGGGGAGGATGAAAATCAAACACATTTTCCTGAGAAAATTCAATGGCCTTTTGAATGTCTCCAAATTCTTCATTCATTTTTCTCATCTAAGTCACCAGGTTCACTAATGGAGATTATTTCAAATATTTCTTTCACTAAATTTTCTTTCTAATTCTATTTTTCATTTTATGAGAAACCTTTAATTTTCTATGTAAATGTTTGGGGTAATGTTCTTGATAGGATTGTTGTGAGAACTGAAATTGAGATATATATCTTATATGGAAGTGGAATTTTATTTATTTGTGTTTAGTATGTGATTTGTTTATCTCGAGTTATAAATTTATCAGTAAACTAATTATATTTAAATAATTTCAAATTACGTCTATTATGTTTTTTCAATGGTTAAATTATAAGTTTAGTCTTTTAAACTTTATAAATAATGTCTAATAGATCTTTGAACTTTTAATTTTGCATCTATCAATAGATCTCTAAACTTAATGTCAAAAATGTCTAATAGGTATATGAACTTTCAATTTTATACATATTTGAGATTTTTTAAAATTAACCAATCTATTAGATATTGAATATGTCTGGACATTTTAATAAATGTCTGATTTTTTATTATTATTATTTTTTTGACAACATGTGGGAGTGGGGTGGGGGATTTGAACCACATACCTCTTGGTCGTTAATACAAGACTTATGCAAGTTGAACTATATTCATGTTGGCAAAGTTGAGGGACTTATATGACACAAAAGTAAAAGTTTAAGGACCTATTGAATTCTTTTTAAAGTTCAAGGACTTAATGGACACAAAATTAAAAGTTCAAGGCCTATATTTGACATTTTTTTAAGTTTAAGAACCAAATTGACACAAGAATGAAAGTTCAGGACTAAACTTGTAATTTAACCTTTTTCAAATTATAATCTTATTATTCAAAAGTAAGTTACATAAATAAATAATTGATTAGCTCCCCTTGACACCATTACTAAATAAAAATATTTAGAAGTTAGCTTATGATAAACTCTCTTTTGATTTAATAAAAGAGTTGGAATGAGTTCTGTTATATGTAATTTTGGACCACTCCGATGCACAAGGAGCTGACGAGGACATCTGGGCAGAAATAGGACTAGGAGACCGACCCAGAGGAAGAACTGACCAAAGGGCCGGGCCAACTTGGTCTGACCCGCGGGCCGAGCTCGATCGCCTCCTTTCTGTCCCAGATGCCTCTGGCCGTCCCGGTTCCGCCTGGTTCGTCCCGAAACGCCTCCAAATTCCTAAAAACCCGAACTCTATTCTCTATTTTCTCCTCTTACTCTTATTTCCTTGCTTCCCATCGTTCTGCTTGCTGACTTAAGCATCGGAGACGGTGTGGCTAGCACCACACCGCTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCCTCTCAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCTCCCGACCAAATTTGACCATCAACAAGTTCAATCCATGATGTCCACCTTCCTAGAATTTAACATCCCTCGTGTTTCTTGACAATCAAATGTAGTATGATTATGGTTGTCCTATGAGATTACTCGTGGTGTGCTCAAACTAGTTCGAACAACTCACGAATATAAAAAAAAAAAAAAAAAAAAATCTCTCTTTTTGACTTGTAGTAATAGTTATGATGAGATTGAGTTCATAGAGTAGCTTGTGTATGAAAAGTGGAATCTGTGTTTGGTACCTGATTTTTTGTTTATCTCAAGCTACAAGCCATGAACTTGCAGGTTGATAAATTCCCCATTTTATATACTATATAAACTAACTTTTAAAATTATAAACTTATAACTTAAATATGGGAGTTGTTTGGAAAATTGATTTTTAATGTTGCTAAAGTTAATAATCCTTCTACATGTTGAAATCATATTATTTACGAATATGTGCTTTGAAAATTGTTATAGGTAATTCTGGACCAACCCGGAATCGAAGGAGTAGACAAGAACAACACGACCCGGAACCGAAGACACAGTCCAGAAATGGACTCGAAAGGGGAATGAGTCATAGGGTTGGACCAAGGCCGAAGGGGTTGGGCCAAGCTCGGCCCGGAGTCTTCCAACGCCTGAAAACCCTAATATGCTAACCCAGGTATAAATACCCTTCTTCACGACTAGAGAGGGGTTCGAAACCTTGATTCTTGTTACTCTTAACTTCCTATTTTGCTGACTTAGGCATCGGAGGAGGTGTGGCAAGCACCACACCGGTGTGCAGTTTTTGTTGGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTTACTGTTCGTGTCACGTGA ATGTCCGATTTGAACTCCGCCGTCCACGGCGGCGCTTCTCGCTACGCCGATCAATTTCTCGGATCCGAGCTCCAACTTCAATCCGATCCCAACAATTCGCCGGAAAGTCACCGGCAGAAGCTCAATCCTCCCGACTCAACCACCAACACTAGCGGCGGTTCGTCGTCCACGCGCCGCCCTCGCGGCCGCCCCGCCGGCTCCAAGAACAAGCCGAAGCCGCCGGTGATCATTACACGTGACAGCCCCAACGCTCTGAGATCGCACGTGCTGGAGGTCTCCACCGGCTCCGATGTGGTTGAAACAATCGCGAGTTACGCCACGCGCCGCCGCCACGGCGTTTGCATTCTCGCTGGCACTGGCGTCGTCACTAACGTCAACTTGCGCCAGCCGGCGGCGCCGTCAGGGACTGTTATGACGCTTCATGGCACATTTGAGATTGTGTCTCTGACCGGTACGTCATTGCCGCCGCCGGCGCCACCAGGTGCCGGCGGGCTGACGATATATTTGTCCGGCGGGCAAGGGCAAGTCGTCGGAGGAAGTGTTGTCGGGCCATTGACGGCTTCGGGTCCGGTTGTTTTGATGGTGGCGTCGTTCACCAATGCGGTGTATGATCGGCTGCCGCTAGACGAGGCGGAGCCACCGATTCAAGCCCAGAGATCCACGTCGCCGTGCTCAGATGTTACAGTTATAGGTGGAGGTGGTCAGCTCGGAGGCGTCGGGAACTTCGACTTTGCCGGGGACGGTTACGGAGCTGACGAGGACATCTGGGCAGAAATAGGACTAGGAGACCGACCCAGAGGAAGAACTGACCAAAGGGCCGGGCCAACTTGGTCTGACCCGCGGGCCGAGCTCGATCGCCTCCTTTCTGTCCCAGATGCCTCTGGCCGTCCCGGTTCCGCCTGGCCACGTCTTCCCCCCTCTCAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTAATTCTGGACCAACCCGGAATCGAAGGAGGTTGGACCAAGGCCGAAGGGGTTGGGCCAAGCTCGGCCCGGAGTCTTCCAACGCCTGAAAACCCTAATATGCTAACCCAGGCATCGGAGGAGGTGTGGCAAGCACCACACCGGTGTGCAGTTTTTGTTGGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTTACTGTTCGTGTCACGTGA ATGTCCGATTTGAACTCCGCCGTCCACGGCGGCGCTTCTCGCTACGCCGATCAATTTCTCGGATCCGAGCTCCAACTTCAATCCGATCCCAACAATTCGCCGGAAAGTCACCGGCAGAAGCTCAATCCTCCCGACTCAACCACCAACACTAGCGGCGGTTCGTCGTCCACGCGCCGCCCTCGCGGCCGCCCCGCCGGCTCCAAGAACAAGCCGAAGCCGCCGGTGATCATTACACGTGACAGCCCCAACGCTCTGAGATCGCACGTGCTGGAGGTCTCCACCGGCTCCGATGTGGTTGAAACAATCGCGAGTTACGCCACGCGCCGCCGCCACGGCGTTTGCATTCTCGCTGGCACTGGCGTCGTCACTAACGTCAACTTGCGCCAGCCGGCGGCGCCGTCAGGGACTGTTATGACGCTTCATGGCACATTTGAGATTGTGTCTCTGACCGGTACGTCATTGCCGCCGCCGGCGCCACCAGGTGCCGGCGGGCTGACGATATATTTGTCCGGCGGGCAAGGGCAAGTCGTCGGAGGAAGTGTTGTCGGGCCATTGACGGCTTCGGGTCCGGTTGTTTTGATGGTGGCGTCGTTCACCAATGCGGTGTATGATCGGCTGCCGCTAGACGAGGCGGAGCCACCGATTCAAGCCCAGAGATCCACGTCGCCGTGCTCAGATGTTACAGTTATAGGTGGAGGTGGTCAGCTCGGAGGCGTCGGGAACTTCGACTTTGCCGGGGACGGTTACGGAGCTGACGAGGACATCTGGGCAGAAATAGGACTAGGAGACCGACCCAGAGGAAGAACTGACCAAAGGGCCGGGCCAACTTGGTCTGACCCGCGGGCCGAGCTCGATCGCCTCCTTTCTGTCCCAGATGCCTCTGGCCGTCCCGGTTCCGCCTGGCCACGTCTTCCCCCCTCTCAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTAATTCTGGACCAACCCGGAATCGAAGGAGGTTGGACCAAGGCCGAAGGGGTTGGGCCAAGCTCGGCCCGGAGTCTTCCAACGCCTGAAAACCCTAATATGCTAACCCAGGCATCGGAGGAGGTGTGGCAAGCACCACACCGGTGTGCAGTTTTTGTTGGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTTACTGTTCGTGTCACGTGA MSDLNSAVHGGASRYADQFLGSELQLQSDPNNSPESHRQKLNPPDSTTNTSGGSSSTRRPRGRPAGSKNKPKPPVIITRDSPNALRSHVLEVSTGSDVVETIASYATRRRHGVCILAGTGVVTNVNLRQPAAPSGTVMTLHGTFEIVSLTGTSLPPPAPPGAGGLTIYLSGGQGQVVGGSVVGPLTASGPVVLMVASFTNAVYDRLPLDEAEPPIQAQRSTSPCSDVTVIGGGGQLGGVGNFDFAGDGYGADEDIWAEIGLGDRPRGRTDQRAGPTWSDPRAELDRLLSVPDASGRPGSAWPRLPPSQTNLPLVAREGQVILDQPGIEGGWTKAEGVGPSSARSLPTPENPNMLTQASEEVWQAPHRCAVFVGFAGHVFPSFYKFTVRVT Homology
BLAST of Spg006191.1 vs. NCBI nr
Match: XP_008451183.1 (PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X1 [Cucumis melo]) HSP 1 Score: 335.1 bits (858), Expect = 8.0e-88 Identity = 189/260 (72.69%), Postives = 209/260 (80.38%), Query Frame = 0
BLAST of Spg006191.1 vs. NCBI nr
Match: XP_004144628.1 (AT-hook motif nuclear-localized protein 25 [Cucumis sativus] >KGN43403.2 hypothetical protein Csa_020332 [Cucumis sativus]) HSP 1 Score: 333.6 bits (854), Expect = 2.3e-87 Identity = 186/252 (73.81%), Postives = 209/252 (82.94%), Query Frame = 0
BLAST of Spg006191.1 vs. NCBI nr
Match: KAA0059590.1 (AT-hook motif nuclear-localized protein 25-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 332.4 bits (851), Expect = 5.2e-87 Identity = 188/260 (72.31%), Postives = 208/260 (80.00%), Query Frame = 0
BLAST of Spg006191.1 vs. NCBI nr
Match: XP_016901052.1 (PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X3 [Cucumis melo]) HSP 1 Score: 318.5 bits (815), Expect = 7.8e-83 Identity = 178/238 (74.79%), Postives = 194/238 (81.51%), Query Frame = 0
BLAST of Spg006191.1 vs. NCBI nr
Match: XP_008451184.1 (PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X2 [Cucumis melo]) HSP 1 Score: 318.2 bits (814), Expect = 1.0e-82 Identity = 177/240 (73.75%), Postives = 195/240 (81.25%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy Swiss-Prot
Match: Q6DBQ1 (AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AHL25 PE=1 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 2.8e-67 Identity = 160/281 (56.94%), Postives = 186/281 (66.19%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy Swiss-Prot
Match: Q9S7C9 (AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana OX=3702 GN=AHL27 PE=1 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 6.0e-62 Identity = 148/270 (54.81%), Postives = 182/270 (67.41%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.2e-57 Identity = 121/217 (55.76%), Postives = 158/217 (72.81%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.0e-57 Identity = 121/212 (57.08%), Postives = 151/212 (71.23%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy Swiss-Prot
Match: Q9SR17 (AT-hook motif nuclear-localized protein 19 OS=Arabidopsis thaliana OX=3702 GN=AHL19 PE=2 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 5.8e-57 Identity = 127/229 (55.46%), Postives = 159/229 (69.43%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy TrEMBL
Match: A0A1S3BQW4 (AT-hook motif nuclear-localized protein 25-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492556 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 3.9e-88 Identity = 189/260 (72.69%), Postives = 209/260 (80.38%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy TrEMBL
Match: A0A5A7UWT4 (AT-hook motif nuclear-localized protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00110 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87 Identity = 188/260 (72.31%), Postives = 208/260 (80.00%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy TrEMBL
Match: A0A1S4DYJ1 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103492556 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 3.8e-83 Identity = 178/238 (74.79%), Postives = 194/238 (81.51%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy TrEMBL
Match: A0A1S3BRN2 (AT-hook motif nuclear-localized protein 25-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492556 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 4.9e-83 Identity = 177/240 (73.75%), Postives = 195/240 (81.25%), Query Frame = 0
BLAST of Spg006191.1 vs. ExPASy TrEMBL
Match: A0A0A0K104 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029400 PE=4 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82 Identity = 174/230 (75.65%), Postives = 194/230 (84.35%), Query Frame = 0
BLAST of Spg006191.1 vs. TAIR 10
Match: AT4G35390.1 (AT-hook protein of GA feedback 1 ) HSP 1 Score: 257.3 bits (656), Expect = 2.0e-68 Identity = 160/281 (56.94%), Postives = 186/281 (66.19%), Query Frame = 0
BLAST of Spg006191.1 vs. TAIR 10
Match: AT1G20900.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 239.6 bits (610), Expect = 4.3e-63 Identity = 148/270 (54.81%), Postives = 182/270 (67.41%), Query Frame = 0
BLAST of Spg006191.1 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 225.3 bits (573), Expect = 8.3e-59 Identity = 121/217 (55.76%), Postives = 158/217 (72.81%), Query Frame = 0
BLAST of Spg006191.1 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 ) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-58 Identity = 121/212 (57.08%), Postives = 151/212 (71.23%), Query Frame = 0
BLAST of Spg006191.1 vs. TAIR 10
Match: AT3G04570.1 (AT-hook motif nuclear-localized protein 19 ) HSP 1 Score: 223.0 bits (567), Expect = 4.1e-58 Identity = 127/229 (55.46%), Postives = 159/229 (69.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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