Sgr019267.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview
NameSgr019267.1
TypemRNA
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptionmembrane protein of ER body-like protein
Locationtig00153343: 210441 .. 213013 (-)
Sequence length921
RNA-Seq ExpressionSgr019267.1
SyntenySgr019267.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAGAAAGTTGGTTTCCCCAACCACTGGTGCGCTTTGAATTACCATCAAATATCGAGAAGCCAAGGCCGCTTCCAGAGTCCTTTGGTCTCTGCCCACCGATACACTCTGGAAGATTATCGGATATAAAAAAGCAAACGCCGGTTTGGAAGTCGAAGGAGGCCGAGGAGGTGATTGAAGAATTTCCCTCTTCCTTACCACTGAAACGCTCTGCATCATCATCAGATATCCAAAACCCAACGTCGCTTTGGGACTCGGAGGAGATGATGGAAGAAAGTCATTATTTCCTTCACTCGCCACCGAGCCCAACGTGGATTTGGGAGCCGGAGGAAAAGAATTCTTCTTCTTCTTTCCTTCCCTTCGCATTATCATCGAATACCGGAGACCGACTATATTTAAAATCGCTCCCACAACAGAAGAAGAAATTAGACCACCTCCCACTGAGCAAATTAGGCTACCTCCTGCAACAGCAGAAGAAATTAGCACCTATCTTAGACCAAGCAGGTGCGTGCAAGTTTTTTTATTATTATTTAAAATCTATTTTGGACCGTGTACTTTCAAAATGAACAAAAGCTCAAAATACAATAATCAAAATAATATTTAAATCTTTCTTCTTTTTTTATACTTGTATAGTTAATTGGATTGGATAAGAAAATTTTAATTTTCAAGTTTTAGTTTCATTAGATTACACTATAAACTTATAAAAATTAATACACTCTAGAATTTAAATTGTTTTCTTTTAAGACTTCTGGTTAAATGGAAATGTGTTTTGCTAATTAGATAAAGATGTTTTTATAGGTGCCCAAGTGTTGGACCTTTGTTTTGGCTATATATCCGCGTTTTGTTGCAGGACTTTAGTAGTTTTTTTTTTTTATCATTCTTATATCGCTCAATAAATGTTTTATTTGTGTGTTTTTTCAATTTAGGTCCTATTGTTAAAAAATTTTCAATTTAATTTCTTATATTTTAAGATTTTTCAATTATACCTTTCATGTCGGTAAATGTTAAAATTGATTGATAACAAGCTTACGTGATATAATAGTTACTGAGTTTGCATAAATTTATAGGAGAGATTAAGTCACCTAAGACAGAAAACTTTCTAATTCCTCCAAATTTCTAAGAAGTTAGTAAAAATTTTGATTTTTTTCTTTTATGTAGTTTAATTTCTCTTTTAAATTTCTGTCAATTCATTAAGTATCGTGTCATATAAGTTTATCATATCATCAACCAATATATACATTCATTGACATGACGGGTATAATTGAAAAGTTTTAAAATATAAGGGACTAAATTGAAAATTTTTAAACAATAGAAACTAAATTGAAAAAATATCCAAACATTAGAGACTAAAACATATATTTAGCCTTCTTATATCTACATCCTTATCGTTATAATAATATTATTATTATTTATTTCAATATTGTATAAGTTGAAAATTAGAGGAATATATAACTTTCAAAATCCAATAAAGCCCAGTCTTTTGTAGCCATCAATTACAACCTTATTAAGATTAAAAAAAAAAAAAAAAGCTTGGGTAAATCTAAACAAAACTTAACGAACCAATACACTAGTAACTTTTTTTAAAGGTCACAAGTTTGAAATTTGAAATGTATTTTAATGTTTAGTCGGTATTGATGCTGCAAAGGATCTTCCAAAAGACGAAGTGTTGATAGAATCGATTCATCAACAGAATGAAGATTTAGCAAACAAAGTTTGTTCAGGTCCTTATGAACATCAGCCACCCTTAGCTCCTAACAGATGGGAGGGTTTGGAAAGCAGTGAAGATGCTAGGGAAGTTGAAACTCCTCGACTCATTCATATTTGTGGATTATTTTCATTACTTCTTCCTTACCCTTCTAGAATTGAAGCTCCTAAAATGCCACAGGTCTTAAAAAGTATGGTATCCAGTGGTTTGACTGAATCAATCACAAGTTTAACCATTGTAATTGCGGCGGTAAATGCCAACATTTCCAATGGTAAGAAAATAAATTCAATCAATTTCCATTTAAGCTAAATTGTAGGTTTGGATATTTTTTGTTTACGAATTTTAAATTTCACATTTAAGCTTTTGAAAAATTGAAATATACCTTTTTCAACTTTTCAATTGTTTTTAAATCGTTTCTTGAGTCCACGACATCAAAAAGTTTGATGAAAGCATGAAGTCATATTCGTATGTATGCTTCATTTTTTTTTTCTTGCTCTTAAACTATATACAATAATGTTTCAATTATGCCCAAGATTGCTTAAACTATATAAGAGTTTTCACTTTTATATCTTAACAATATATTTTCCTTTAATGGAGGATGATTTTCAAACAATTAAAAAGTACAGGGGTATGTTTGAAACTTTGTAAAGTTTCAAGAGAGAAAATGAAAAATAGCGAAAGTTTAGAGGCCAAAGCTGCCCTTTATCTTTTTCTATTATTTTTGCTCATATGTAGTTATCCTCAGAATCAGATTCCATTCTAGTTACTAATCTTACCTTCCATACATTTTTCATAATTGCAGGGAATATGGTAGCTTTGGCATTGACAAATTTAATTTCGGGAATTTTTCTCATTAGACACGAT

mRNA sequence

ATGAAGGAAGAAAGTTGGTTTCCCCAACCACTGGTGCGCTTTGAATTACCATCAAATATCGAGAAGCCAAGGCCGCTTCCAGAGTCCTTTGGTCTCTGCCCACCGATACACTCTGGAAGATTATCGGATATAAAAAAGCAAACGCCGGTTTGGAAGTCGAAGGAGGCCGAGGAGGTGATTGAAGAATTTCCCTCTTCCTTACCACTGAAACGCTCTGCATCATCATCAGATATCCAAAACCCAACGTCGCTTTGGGACTCGGAGGAGATGATGGAAGAAAGTCATTATTTCCTTCACTCGCCACCGAGCCCAACGTGGATTTGGGAGCCGGAGGAAAAGAATTCTTCTTCTTCTTTCCTTCCCTTCGCATTATCATCGAATACCGGAGACCGACTATATTTAAAATCGCTCCCACAACAGAAGAAGAAATTAGACCACCTCCCACTGAGCAAATTAGGCTACCTCCTGCAACAGCAGAAGAAATTAGCACCTATCTTAGACCAAGCAGTCGGTATTGATGCTGCAAAGGATCTTCCAAAAGACGAAGTGTTGATAGAATCGATTCATCAACAGAATGAAGATTTAGCAAACAAAGTTTGTTCAGGTCCTTATGAACATCAGCCACCCTTAGCTCCTAACAGATGGGAGGGTTTGGAAAGCAGTGAAGATGCTAGGGAAGTTGAAACTCCTCGACTCATTCATATTTGTGGATTATTTTCATTACTTCTTCCTTACCCTTCTAGAATTGAAGCTCCTAAAATGCCACAGGTCTTAAAAAGTATGGTATCCAGTGGTTTGACTGAATCAATCACAAGTTTAACCATTGTAATTGCGGCGGTAAATGCCAACATTTCCAATGGGAATATGGTAGCTTTGGCATTGACAAATTTAATTTCGGGAATTTTTCTCATTAGACACGAT

Coding sequence (CDS)

ATGAAGGAAGAAAGTTGGTTTCCCCAACCACTGGTGCGCTTTGAATTACCATCAAATATCGAGAAGCCAAGGCCGCTTCCAGAGTCCTTTGGTCTCTGCCCACCGATACACTCTGGAAGATTATCGGATATAAAAAAGCAAACGCCGGTTTGGAAGTCGAAGGAGGCCGAGGAGGTGATTGAAGAATTTCCCTCTTCCTTACCACTGAAACGCTCTGCATCATCATCAGATATCCAAAACCCAACGTCGCTTTGGGACTCGGAGGAGATGATGGAAGAAAGTCATTATTTCCTTCACTCGCCACCGAGCCCAACGTGGATTTGGGAGCCGGAGGAAAAGAATTCTTCTTCTTCTTTCCTTCCCTTCGCATTATCATCGAATACCGGAGACCGACTATATTTAAAATCGCTCCCACAACAGAAGAAGAAATTAGACCACCTCCCACTGAGCAAATTAGGCTACCTCCTGCAACAGCAGAAGAAATTAGCACCTATCTTAGACCAAGCAGTCGGTATTGATGCTGCAAAGGATCTTCCAAAAGACGAAGTGTTGATAGAATCGATTCATCAACAGAATGAAGATTTAGCAAACAAAGTTTGTTCAGGTCCTTATGAACATCAGCCACCCTTAGCTCCTAACAGATGGGAGGGTTTGGAAAGCAGTGAAGATGCTAGGGAAGTTGAAACTCCTCGACTCATTCATATTTGTGGATTATTTTCATTACTTCTTCCTTACCCTTCTAGAATTGAAGCTCCTAAAATGCCACAGGTCTTAAAAAGTATGGTATCCAGTGGTTTGACTGAATCAATCACAAGTTTAACCATTGTAATTGCGGCGGTAAATGCCAACATTTCCAATGGGAATATGGTAGCTTTGGCATTGACAAATTTAATTTCGGGAATTTTTCTCATTAGACACGAT

Protein sequence

MKEESWFPQPLVRFELPSNIEKPRPLPESFGLCPPIHSGRLSDIKKQTPVWKSKEAEEVIEEFPSSLPLKRSASSSDIQNPTSLWDSEEMMEESHYFLHSPPSPTWIWEPEEKNSSSSFLPFALSSNTGDRLYLKSLPQQKKKLDHLPLSKLGYLLQQQKKLAPILDQAVGIDAAKDLPKDEVLIESIHQQNEDLANKVCSGPYEHQPPLAPNRWEGLESSEDAREVETPRLIHICGLFSLLLPYPSRIEAPKMPQVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISGIFLIRHD
Homology
[Close]
BLAST of Sgr019267.1 vs. NCBI nr
Match: XP_022155092.1 (membrane protein of ER body-like protein [Momordica charantia])

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-07
Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 256 QVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISGIFLIRHD 308
           +VLKSMV+ GLTES TSL+IV AA  A ISN N+V LALTNLI+G+F+IRH+
Sbjct: 108 EVLKSMVACGLTESTTSLSIVTAAATAQISNENIVVLALTNLIAGLFVIRHN 159

[Close]
BLAST of Sgr019267.1 vs. NCBI nr
Match: XP_022991341.1 (membrane protein of ER body 2-like [Cucurbita maxima])

HSP 1 Score: 62.8 bits (151), Expect = 6.1e-06
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 241 LLLPYPSRIEAPKMPQVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISG 300
           ++ PY       +  ++ + +V  GL ESITSL IV AA+ A IS+GN+VALALTNL++G
Sbjct: 10  MIPPYEPSTRVRRRWEIRRYIVLGGLMESITSLAIVTAAMTAKISDGNIVALALTNLLAG 69

Query: 301 IFLIRHD 308
           +F+IRHD
Sbjct: 70  LFVIRHD 76

[Close]
BLAST of Sgr019267.1 vs. NCBI nr
Match: XP_038898254.1 (uncharacterized protein LOC120085971 isoform X1 [Benincasa hispida])

HSP 1 Score: 62.8 bits (151), Expect = 6.1e-06
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0 

Query: 163 APILDQAVGIDAAKDLPKDEVLIESIHQQNEDLANKVCSGPYEHQPPLAPNRWEGLESSE 222
           AP+ DQ+  + A  D+ K    +E+    +  +++ + +       P A  R    +S+ 
Sbjct: 606 APVPDQSAAV-AETDIRKTPETVEATVPDSSPVSSSLAA-------PTAAER--VTDSAV 665

Query: 223 DAREVET-PRLIHIC-GLFSLLLPYPSRIEAPKMPQVLKSMVSSGLTESITSLTIVIAAV 282
            +REVE  P  I I   L   + P PSR       +++KS+V  GL ESITSL IV +A 
Sbjct: 666 GSREVEAGPVTISIGESLDEQVQPEPSRY---NRWEIVKSIVYGGLAESITSLGIVASAA 725

Query: 283 NANISNGNMVALALTNLISGIFLIRHD 308
           +AN   GN+V LAL NLISG F++ H+
Sbjct: 726 SANTETGNIVVLALANLISGFFILGHN 739

[Close]
BLAST of Sgr019267.1 vs. NCBI nr
Match: XP_038898255.1 (uncharacterized protein LOC120085971 isoform X2 [Benincasa hispida])

HSP 1 Score: 62.8 bits (151), Expect = 6.1e-06
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0 

Query: 163 APILDQAVGIDAAKDLPKDEVLIESIHQQNEDLANKVCSGPYEHQPPLAPNRWEGLESSE 222
           AP+ DQ+  + A  D+ K    +E+    +  +++ + +       P A  R    +S+ 
Sbjct: 565 APVPDQSAAV-AETDIRKTPETVEATVPDSSPVSSSLAA-------PTAAER--VTDSAV 624

Query: 223 DAREVET-PRLIHIC-GLFSLLLPYPSRIEAPKMPQVLKSMVSSGLTESITSLTIVIAAV 282
            +REVE  P  I I   L   + P PSR       +++KS+V  GL ESITSL IV +A 
Sbjct: 625 GSREVEAGPVTISIGESLDEQVQPEPSRY---NRWEIVKSIVYGGLAESITSLGIVASAA 684

Query: 283 NANISNGNMVALALTNLISGIFLIRHD 308
           +AN   GN+V LAL NLISG F++ H+
Sbjct: 685 SANTETGNIVVLALANLISGFFILGHN 698

[Close]
BLAST of Sgr019267.1 vs. NCBI nr
Match: XP_023548925.1 (uncharacterized protein LOC111807427 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-05
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 256 QVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISGIFLIRHD 308
           ++ + +V  GL ESITSL IV AA++A IS+GN++ALALTNLI+G+F+IRHD
Sbjct: 580 EIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 631

[Close]
BLAST of Sgr019267.1 vs. ExPASy TrEMBL
Match: A0A6J1DNF3 (membrane protein of ER body-like protein OS=Momordica charantia OX=3673 GN=LOC111022225 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-07
Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 256 QVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISGIFLIRHD 308
           +VLKSMV+ GLTES TSL+IV AA  A ISN N+V LALTNLI+G+F+IRH+
Sbjct: 108 EVLKSMVACGLTESTTSLSIVTAAATAQISNENIVVLALTNLIAGLFVIRHN 159

[Close]
BLAST of Sgr019267.1 vs. ExPASy TrEMBL
Match: A0A6J1JQG4 (membrane protein of ER body 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488012 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-06
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 241 LLLPYPSRIEAPKMPQVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISG 300
           ++ PY       +  ++ + +V  GL ESITSL IV AA+ A IS+GN+VALALTNL++G
Sbjct: 10  MIPPYEPSTRVRRRWEIRRYIVLGGLMESITSLAIVTAAMTAKISDGNIVALALTNLLAG 69

Query: 301 IFLIRHD 308
           +F+IRHD
Sbjct: 70  LFVIRHD 76

[Close]
BLAST of Sgr019267.1 vs. ExPASy TrEMBL
Match: A0A6J1GQF8 (uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.0e-06
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 256 QVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISGIFLIRHD 308
           ++ + +V  GL ESITSL IV AA++A IS+GN++ALALTNLI+G+F+IRHD
Sbjct: 726 EIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 777

[Close]
BLAST of Sgr019267.1 vs. ExPASy TrEMBL
Match: A0A6J1GQA4 (uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.0e-06
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 256 QVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISGIFLIRHD 308
           ++ + +V  GL ESITSL IV AA++A IS+GN++ALALTNLI+G+F+IRHD
Sbjct: 727 EIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 778

[Close]
BLAST of Sgr019267.1 vs. ExPASy TrEMBL
Match: A0A6J1GQF7 (uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.0e-06
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 256 QVLKSMVSSGLTESITSLTIVIAAVNANISNGNMVALALTNLISGIFLIRHD 308
           ++ + +V  GL ESITSL IV AA++A IS+GN++ALALTNLI+G+F+IRHD
Sbjct: 539 EIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIIALALTNLIAGLFIIRHD 590

[Close]
BLAST of Sgr019267.1 vs. TAIR 10
Match: AT4G27860.2 (vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.7e-04
Identity = 43/153 (28.10%), Postives = 69/153 (45.10%), Query Frame = 0 

Query: 167 DQAVGIDAAKDLPKDEVLIESIHQ--QNEDL--------ANKVCSGPYEHQPPLAPNRWE 226
           DQA   D   D   ++   +++++  QN D          +K       H  P+ P+  E
Sbjct: 299 DQAANTDQDFDKKTEKPSKQTVNKETQNHDKEAADPDQDVDKETENQKSHLTPIYPSPLE 358

Query: 227 GLESSEDAREVETPRLIHICGLFSLLLPYPSRIEAPK---MPQVLKSMVSSGLTESITSL 286
                   +E +T  ++       +    P+ +E  K     ++LKS+V  GLTESITSL
Sbjct: 359 QPSKQIINKETQTEPMLPPNAQSEI----PNSVEPRKGGNKVEILKSIVYGGLTESITSL 418

Query: 287 TIVIAAVNANISNGNMVALALTNLISGIFLIRH 307
             V +A  +  S  N++AL + NL SG+ L  H
Sbjct: 419 CTVTSAAASGASTLNVLALGVANLSSGLLLTVH 447

The following BLAST results are available for this feature:
BLAST of Sgr019267.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155092.17.2e-0769.23membrane protein of ER body-like protein [Momordica charantia][more]
XP_022991341.16.1e-0650.75membrane protein of ER body 2-like [Cucurbita maxima][more]
XP_038898254.16.1e-0636.05uncharacterized protein LOC120085971 isoform X1 [Benincasa hispida][more]
XP_038898255.16.1e-0636.05uncharacterized protein LOC120085971 isoform X2 [Benincasa hispida][more]
XP_023548925.11.0e-0561.54uncharacterized protein LOC111807427 [Cucurbita pepo subsp. pepo][more]
BLAST of Sgr019267.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr019267.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DNF33.5e-0769.23membrane protein of ER body-like protein OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1JQG42.9e-0650.75membrane protein of ER body 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488012 P... [more]
A0A6J1GQF85.0e-0661.54uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GQA45.0e-0661.54uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GQF75.0e-0661.54uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Sgr019267.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27860.22.7e-0428.10vacuolar iron transporter (VIT) family protein [more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sgr019267Sgr019267gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sgr019267.1.exon3Sgr019267.1.exon3exon
Sgr019267.1.exon2Sgr019267.1.exon2exon
Sgr019267.1.exon1Sgr019267.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Sgr019267.1cds.Sgr019267.1_3CDS
cds.Sgr019267.1cds.Sgr019267.1_2CDS
cds.Sgr019267.1cds.Sgr019267.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sgr019267.1Sgr019267.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030026 cellular manganese ion homeostasis
biological_process GO:0071421 manganese ion transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005384 manganese ion transmembrane transporter activity