Sgr018604.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018604.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Retrotran_gag_3 domain-containing protein
Location	tig00153206: 773642 .. 775726 (-)
Sequence length	498
RNA-Seq Expression	Sgr018604.1
Synteny	Sgr018604.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACCTACGCATTAAATGGGTTGTCCTACGAATTCAATGCCTTTAAAACATGCACTCGTTCAACTCCAATTGGGTTAGAAGAACTACATGTACTCCTCCAGGCAGAGGAATCAACCATATATGATCGATCTAAAGGTATGGATAATCTTTTCCAACCTATTGCAATGAACGGTCAAATCTGTGAATCCAATGGCAAACGCAAACATGGACGCAGGTTCAATTGTGGTGAAAATCGTGGGCTTTTAGTCAAATCAATAAAAATCGAGGAAGAGGTGTGTGCATCCCAACCCCAAATGTCTCCAATTTCAACATACTCAGGTCAATATTCTAATCCTTAAATTCCTGTTTAGTCAAATAGAATACACTTCTAGATTTGCTAAAGATTCAGGCATAATGTCTTTGACTGCCACCATCGAATGAATTATGCCTATTAAGTATCTACCAGCATAGTTGGCCACCATGAGTGCACATGCTTCTAATTTTGCTAAAAGTGACTCTTTCTGGCTGATGGATAATGATATAATGTGCATCTTACTCCAGCAAGAACAATCTTAACACTTCCAATGAGTTCAATGGTTAGGAACACATTTTTGTAGGCAGTGGACAGAAACTTCCCATCACACATATAGTTTCGGGCTTTTCAAACACTCCTTGTCATTCTTTTATTTTAAATAATCTACTTCTTGTCCCTAATAAAACATCTAACCTATTGTCTGTGAATCAGTTTTTCTGTGACAATAGCTGCATCTTTATCTTTGATTCTTACAAATTTTGTATTCAGGACAAAATCACGGGAACGATATTGTTTGAGGGTATGAGTCTAAATGAACTTTATCCCATTCTATTGCCCACCAATACATTTGGATATACTGCTAACCGAAACACAAGAGTTTCTTTTACTCAATGGCATAATAGATTAGGGCATCCTATTGAAAGTATTATTGAAATTTTATGAAAAATCTCGTCTTGTTGTTGGTAAAGGATATGAATCTTGTATTTGTTCTTACTATATGTCTAGGAAACCTACTAAACTTTTTGTCTCTTTATCTCAAACAAGTATTAGTAAACCATTAGAATTAATTCATATTGATGTCTAGGGCCCCACCCTTGAAAATTCTATTTATGGTTTTAAATACTATGTTTCTTTTGTTGATGACTACTCGCGTTATCAAACCTTTTGTTGAGAACCTGCTTAATTCTAAAATCAAAATATTTCATAGTGATAAAGGTGGTGAGTCGTAAATCATTCCATGCGTTCTCTATTTGATACTCATGGCATATTGCATCAAACATCTTGCCCTCACACACCAGTACAAAATGGTGTTGTTGAGCACAAACACAAATATATTGTTGAGACTGTCATTTCACTTTTATCTAAATCTTTAGTGCCTACCCAATTCTGGTTTCACGCATTTGCAACAACTACATTTTTACTTAATCGGTTACCTTCAAAAGTTACTAATAATATGTCTTCTTTTGAAAAACTTTTTTCTTATAAATCTAATTACCAACATCTTCGTGTATTTGGATGTGCGTGTTACCCTTGGCTACGACCTTACACTTCAAATAAATTACAACAACGTACTTCTCACTTTGTCTTTATGAGATATCCACTTGGTATGAAGGGTTACATTTGTTGTGATCCTATTACTAGAAAGTTTTATACATTGAGACATGTTATCTTTGATGAAAATAACTTCCCTTTTACACACAAAGATTCTCTCATAAGTAACACTTCTAATACCACACACTCTACTTCTTCCTCTTCTATAGATGCTATTTTATTTTTAAATTCTCATAGAAATGATTCTTGTCAAGAGATATCTACTGTTACTCTAGATATAAATGTTCATGTCAATGTTCCATCAAATACCTTTGTCCCTATAGTTACACCACCTTCACCTGAAATATCTCATGAGAAAAAACACATCACCAAACAACTTGTTCTAGTTGTGGTAGATGCTTTGCCTTCAAATACAGACGAGGATACTTCCATTCAACCTATCTCATCCACTGATCTTCCTCCTCCAATGCAACTAGGTGATGTTCCAATCTCTTCCTCAAATCTCCTCCCCTTGTAG

mRNA sequence

ATGGTGACCTACGCATTAAATGGGTTGTCCTACGAATTCAATGCCTTTAAAACATGCACTCGTTCAACTCCAATTGGGTTAGAAGAACTACATGTACTCCTCCAGGCAGAGGAATCAACCATATATGATCGATCTAAAGGTATGGATAATCTTTTCCAACCTATTGCAATGAACGGTCAAATCTGTGAATCCAATGGCAAACGCAAACATGGACGCAGAAATGATTCTTGTCAAGAGATATCTACTGTTACTCTAGATATAAATGTTCATGTCAATGTTCCATCAAATACCTTTGTCCCTATAGTTACACCACCTTCACCTGAAATATCTCATGAGAAAAAACACATCACCAAACAACTTGTTCTAGTTGTGGTAGATGCTTTGCCTTCAAATACAGACGAGGATACTTCCATTCAACCTATCTCATCCACTGATCTTCCTCCTCCAATGCAACTAGGTGATGTTCCAATCTCTTCCTCAAATCTCCTCCCCTTGTAG

Coding sequence (CDS)

ATGGTGACCTACGCATTAAATGGGTTGTCCTACGAATTCAATGCCTTTAAAACATGCACTCGTTCAACTCCAATTGGGTTAGAAGAACTACATGTACTCCTCCAGGCAGAGGAATCAACCATATATGATCGATCTAAAGGTATGGATAATCTTTTCCAACCTATTGCAATGAACGGTCAAATCTGTGAATCCAATGGCAAACGCAAACATGGACGCAGAAATGATTCTTGTCAAGAGATATCTACTGTTACTCTAGATATAAATGTTCATGTCAATGTTCCATCAAATACCTTTGTCCCTATAGTTACACCACCTTCACCTGAAATATCTCATGAGAAAAAACACATCACCAAACAACTTGTTCTAGTTGTGGTAGATGCTTTGCCTTCAAATACAGACGAGGATACTTCCATTCAACCTATCTCATCCACTGATCTTCCTCCTCCAATGCAACTAGGTGATGTTCCAATCTCTTCCTCAAATCTCCTCCCCTTGTAG

Protein sequence

MVTYALNGLSYEFNAFKTCTRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAMNGQICESNGKRKHGRRNDSCQEISTVTLDINVHVNVPSNTFVPIVTPPSPEISHEKKHITKQLVLVVVDALPSNTDEDTSIQPISSTDLPPPMQLGDVPISSSNLLPL

Homology

[Close]

BLAST of Sgr018604.1 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. NCBI nr
Match: KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. NCBI nr
Match: XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-06
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRSTP+  EELHVLL+AEES +  +SK  D   QP A+
Sbjct: 167 LLIYALNGLPTEYNTFRTSMRTRSTPVTFEELHVLLKAEESALAKQSKRDDLCKQPTAL 225

[Close]

BLAST of Sgr018604.1 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]

BLAST of Sgr018604.1 vs. ExPASy TrEMBL
Match: A0A5D3D3T6 (Retrotran_gag_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002980 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.8e-06
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           +V YALNGL  E+NAF+T   TRS P+   ELH+LL++EES +  ++K  D   QP AM
Sbjct: 191 LVIYALNGLPREYNAFRTSMQTRSQPVSFSELHILLKSEESALEKQTKREDISVQPTAM 249

The following BLAST results are available for this feature:

BLAST of Sgr018604.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448007.1	3.3e-06	52.54	PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]	[more]
XP_008448008.1	3.3e-06	52.54	PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]	[more]
KAA0049700.1	3.3e-06	52.54	T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa]	[more]
XP_016900446.1	3.3e-06	52.54	PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]	[more]
KAG6588985.1	5.6e-06	54.24	Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyr...	[more]

BLAST of Sgr018604.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr018604.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLI6	1.6e-06	52.54	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	1.6e-06	52.54	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	1.6e-06	52.54	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIR3	1.6e-06	52.54	uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3D3T6	7.8e-06	50.85	Retrotran_gag_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Sgr018604.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..165

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr018604	Sgr018604	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr018604.1.exon2	Sgr018604.1.exon2	exon
Sgr018604.1.exon1	Sgr018604.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr018604.1	cds.Sgr018604.1_2	CDS
cds.Sgr018604.1	cds.Sgr018604.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr018604.1	Sgr018604.1-protein	polypeptide