Sgr018604 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr018604
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Locationtig00153206: 773642 .. 775726 (-)
RNA-Seq ExpressionSgr018604
SyntenySgr018604
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACCTACGCATTAAATGGGTTGTCCTACGAATTCAATGCCTTTAAAACATGCACTCGTTCAACTCCAATTGGGTTAGAAGAACTACATGTACTCCTCCAGGCAGAGGAATCAACCATATATGATCGATCTAAAGGTATGGATAATCTTTTCCAACCTATTGCAATGAACGGTCAAATCTGTGAATCCAATGGCAAACGCAAACATGGACGCAGGTTCAATTGTGGTGAAAATCGTGGGCTTTTAGTCAAATCAATAAAAATCGAGGAAGAGGTGTGTGCATCCCAACCCCAAATGTCTCCAATTTCAACATACTCAGGTCAATATTCTAATCCTTAAATTCCTGTTTAGTCAAATAGAATACACTTCTAGATTTGCTAAAGATTCAGGCATAATGTCTTTGACTGCCACCATCGAATGAATTATGCCTATTAAGTATCTACCAGCATAGTTGGCCACCATGAGTGCACATGCTTCTAATTTTGCTAAAAGTGACTCTTTCTGGCTGATGGATAATGATATAATGTGCATCTTACTCCAGCAAGAACAATCTTAACACTTCCAATGAGTTCAATGGTTAGGAACACATTTTTGTAGGCAGTGGACAGAAACTTCCCATCACACATATAGTTTCGGGCTTTTCAAACACTCCTTGTCATTCTTTTATTTTAAATAATCTACTTCTTGTCCCTAATAAAACATCTAACCTATTGTCTGTGAATCAGTTTTTCTGTGACAATAGCTGCATCTTTATCTTTGATTCTTACAAATTTTGTATTCAGGACAAAATCACGGGAACGATATTGTTTGAGGGTATGAGTCTAAATGAACTTTATCCCATTCTATTGCCCACCAATACATTTGGATATACTGCTAACCGAAACACAAGAGTTTCTTTTACTCAATGGCATAATAGATTAGGGCATCCTATTGAAAGTATTATTGAAATTTTATGAAAAATCTCGTCTTGTTGTTGGTAAAGGATATGAATCTTGTATTTGTTCTTACTATATGTCTAGGAAACCTACTAAACTTTTTGTCTCTTTATCTCAAACAAGTATTAGTAAACCATTAGAATTAATTCATATTGATGTCTAGGGCCCCACCCTTGAAAATTCTATTTATGGTTTTAAATACTATGTTTCTTTTGTTGATGACTACTCGCGTTATCAAACCTTTTGTTGAGAACCTGCTTAATTCTAAAATCAAAATATTTCATAGTGATAAAGGTGGTGAGTCGTAAATCATTCCATGCGTTCTCTATTTGATACTCATGGCATATTGCATCAAACATCTTGCCCTCACACACCAGTACAAAATGGTGTTGTTGAGCACAAACACAAATATATTGTTGAGACTGTCATTTCACTTTTATCTAAATCTTTAGTGCCTACCCAATTCTGGTTTCACGCATTTGCAACAACTACATTTTTACTTAATCGGTTACCTTCAAAAGTTACTAATAATATGTCTTCTTTTGAAAAACTTTTTTCTTATAAATCTAATTACCAACATCTTCGTGTATTTGGATGTGCGTGTTACCCTTGGCTACGACCTTACACTTCAAATAAATTACAACAACGTACTTCTCACTTTGTCTTTATGAGATATCCACTTGGTATGAAGGGTTACATTTGTTGTGATCCTATTACTAGAAAGTTTTATACATTGAGACATGTTATCTTTGATGAAAATAACTTCCCTTTTACACACAAAGATTCTCTCATAAGTAACACTTCTAATACCACACACTCTACTTCTTCCTCTTCTATAGATGCTATTTTATTTTTAAATTCTCATAGAAATGATTCTTGTCAAGAGATATCTACTGTTACTCTAGATATAAATGTTCATGTCAATGTTCCATCAAATACCTTTGTCCCTATAGTTACACCACCTTCACCTGAAATATCTCATGAGAAAAAACACATCACCAAACAACTTGTTCTAGTTGTGGTAGATGCTTTGCCTTCAAATACAGACGAGGATACTTCCATTCAACCTATCTCATCCACTGATCTTCCTCCTCCAATGCAACTAGGTGATGTTCCAATCTCTTCCTCAAATCTCCTCCCCTTGTAG

mRNA sequence

ATGGTGACCTACGCATTAAATGGGTTGTCCTACGAATTCAATGCCTTTAAAACATGCACTCGTTCAACTCCAATTGGGTTAGAAGAACTACATGTACTCCTCCAGGCAGAGGAATCAACCATATATGATCGATCTAAAGGTATGGATAATCTTTTCCAACCTATTGCAATGAACGGTCAAATCTGTGAATCCAATGGCAAACGCAAACATGGACGCAGAAATGATTCTTGTCAAGAGATATCTACTGTTACTCTAGATATAAATGTTCATGTCAATGTTCCATCAAATACCTTTGTCCCTATAGTTACACCACCTTCACCTGAAATATCTCATGAGAAAAAACACATCACCAAACAACTTGTTCTAGTTGTGGTAGATGCTTTGCCTTCAAATACAGACGAGGATACTTCCATTCAACCTATCTCATCCACTGATCTTCCTCCTCCAATGCAACTAGGTGATGTTCCAATCTCTTCCTCAAATCTCCTCCCCTTGTAG

Coding sequence (CDS)

ATGGTGACCTACGCATTAAATGGGTTGTCCTACGAATTCAATGCCTTTAAAACATGCACTCGTTCAACTCCAATTGGGTTAGAAGAACTACATGTACTCCTCCAGGCAGAGGAATCAACCATATATGATCGATCTAAAGGTATGGATAATCTTTTCCAACCTATTGCAATGAACGGTCAAATCTGTGAATCCAATGGCAAACGCAAACATGGACGCAGAAATGATTCTTGTCAAGAGATATCTACTGTTACTCTAGATATAAATGTTCATGTCAATGTTCCATCAAATACCTTTGTCCCTATAGTTACACCACCTTCACCTGAAATATCTCATGAGAAAAAACACATCACCAAACAACTTGTTCTAGTTGTGGTAGATGCTTTGCCTTCAAATACAGACGAGGATACTTCCATTCAACCTATCTCATCCACTGATCTTCCTCCTCCAATGCAACTAGGTGATGTTCCAATCTCTTCCTCAAATCTCCTCCCCTTGTAG

Protein sequence

MVTYALNGLSYEFNAFKTCTRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAMNGQICESNGKRKHGRRNDSCQEISTVTLDINVHVNVPSNTFVPIVTPPSPEISHEKKHITKQLVLVVVDALPSNTDEDTSIQPISSTDLPPPMQLGDVPISSSNLLPL
Homology
[Close]
BLAST of Sgr018604 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. NCBI nr
Match: KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. NCBI nr
Match: XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-06
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRSTP+  EELHVLL+AEES +  +SK  D   QP A+
Sbjct: 167 LLIYALNGLPTEYNTFRTSMRTRSTPVTFEELHVLLKAEESALAKQSKRDDLCKQPTAL 225

[Close]
BLAST of Sgr018604 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           ++ YALNGL  E+N F+T   TRS P+  EELHVLL+AEES +  +SKG D+  QP  +
Sbjct: 181 LLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVL 239

[Close]
BLAST of Sgr018604 vs. ExPASy TrEMBL
Match: A0A5D3D3T6 (Retrotran_gag_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002980 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.8e-06
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0 

Query: 1   MVTYALNGLSYEFNAFKTC--TRSTPIGLEELHVLLQAEESTIYDRSKGMDNLFQPIAM 58
           +V YALNGL  E+NAF+T   TRS P+   ELH+LL++EES +  ++K  D   QP AM
Sbjct: 191 LVIYALNGLPREYNAFRTSMQTRSQPVSFSELHILLKSEESALEKQTKREDISVQPTAM 249

The following BLAST results are available for this feature:
BLAST of Sgr018604 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008448007.13.3e-0652.54PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo][more]
XP_008448008.13.3e-0652.54PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo][more]
KAA0049700.13.3e-0652.54T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa][more]
XP_016900446.13.3e-0652.54PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo][more]
KAG6588985.15.6e-0654.24Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyr... [more]
BLAST of Sgr018604 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr018604 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CLI61.6e-0652.54T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=... [more]
A0A1S3BI581.6e-0652.54uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4DWT91.6e-0652.54uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BIR31.6e-0652.54uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3D3T67.8e-0650.85Retrotran_gag_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695... [more]
BLAST of Sgr018604 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr018604.1Sgr018604.1mRNA