Homology
BLAST of Sgr017913.1 vs. NCBI nr
Match:
XP_038897335.1 (cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida] >XP_038897338.1 cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida])
HSP 1 Score: 843.6 bits (2178), Expect = 1.0e-240
Identity = 434/506 (85.77%), Postives = 456/506 (90.12%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDE E GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
DDLG K EEPK+E P P+ GAS PGVG A EV GLGDGG VSERVTE Y+Q+PD
Sbjct: 61 DDLGFK-TEEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPD 120
Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQQ------ 257
+R NE+A+RGGAG GPPVGGGGGIRVELGQGSK NELEERS+NN+ H PQQQ
Sbjct: 121 IRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQA 180
Query: 258 ----QHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILF 317
QHHHQPP GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GN+GS GGGGGGTILF
Sbjct: 181 QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILF 240
Query: 318 VGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNG 377
VGDLHWWTTDAELE ELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNG
Sbjct: 241 VGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNG 300
Query: 378 HDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGG 437
H FNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQA N Q RRGPNDA GKIGGSNIATGG
Sbjct: 301 HIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIATGG 360
Query: 438 NYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGAT 497
NYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR+RGGGMGGRGIMGNGGNGFGQGIGA
Sbjct: 361 NYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGAA 420
Query: 498 PPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPH 557
PPLLHPQSMM QGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPH
Sbjct: 421 PPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480
Query: 558 VNPAFFGRGMPMTGMGMMPTSGVDGP 573
VNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 VNPAFFGRGMPMNGMGMMPTSGVDGP 505
BLAST of Sgr017913.1 vs. NCBI nr
Match:
XP_038897113.1 (uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida])
HSP 1 Score: 843.2 bits (2177), Expect = 1.3e-240
Identity = 438/506 (86.56%), Postives = 461/506 (91.11%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
DDLG K EEPK+E PV P+ GAS PGVG A EV GLGDGG VSERVTE Y+Q+PD
Sbjct: 61 DDLGFK-TEEPKMEPPAPVPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPD 120
Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGH---------PGP 257
LRTNE+AVRGG GSGPPVGGGGGIRVELGQGSK +ELEERSSNNVV H P P
Sbjct: 121 LRTNEMAVRGGVGSGPPVGGGGGIRVELGQGSKTSELEERSSNNVVAHQAQHQHQQQPQP 180
Query: 258 Q-QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILF 317
Q Q QHHHQPP GVLGN G+VENEGLLRQGG +NVNGVGGN +GN+GS GGGGGGTILF
Sbjct: 181 QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGVINVNGVGGNAFGNMGSAGGGGGGTILF 240
Query: 318 VGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNG 377
VGDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNG
Sbjct: 241 VGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNG 300
Query: 378 HDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGG 437
H FNGRPCVVAYASPFSVK+MGEAQVNRNQQM+QA N Q RRGPNDA GKIGGS+IATGG
Sbjct: 301 HIFNGRPCVVAYASPFSVKKMGEAQVNRNQQMAQATNPQARRGPNDAVGKIGGSSIATGG 360
Query: 438 NYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGAT 497
NYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR+RGGGMGGRGIMGNGGNGFGQGIGAT
Sbjct: 361 NYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGAT 420
Query: 498 PPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPH 557
PPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPH
Sbjct: 421 PPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480
Query: 558 VNPAFFGRGMPMTGMGMMPTSGVDGP 573
VNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 VNPAFFGRGMPMNGMGMMPTSGVDGP 505
BLAST of Sgr017913.1 vs. NCBI nr
Match:
TYK07956.1 (cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. makuwa])
HSP 1 Score: 842.0 bits (2174), Expect = 3.0e-240
Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
D LG KREEEPK+E PV P GAS PG+G A EVTGLGD GG VSERVTE Y+Q+P
Sbjct: 61 DGLGFKREEEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIP 120
Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQ------- 257
DLRTNE+A+RGGAGSGPPVGGG GIRVELGQGSK ELEERSSNNV GH PQ
Sbjct: 121 DLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAPQQPQLQPQ 180
Query: 258 -QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFV 317
Q QHHHQPP GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GNVGS GGG GGT+LFV
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFV 240
Query: 318 GDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 377
GDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 300
Query: 378 DFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGN 437
FNGRPCVVAYASPFSVK+MGEAQVNRNQQ++QA N Q RR PNDA GKIGGS+IATGGN
Sbjct: 301 IFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGN 360
Query: 438 YQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATP 497
YQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATP
Sbjct: 361 YQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATP 420
Query: 498 PLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHV 557
PLLHPQSMMGQGFDP+FGAP+GRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480
Query: 558 NPAFFGRGMPMTGMGMMPTSGVDGP 573
NPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 NPAFFGRGMPMNGMGMMPTSGVDGP 505
BLAST of Sgr017913.1 vs. NCBI nr
Match:
XP_022139595.1 (cleavage and polyadenylation specificity factor subunit 6 [Momordica charantia])
HSP 1 Score: 837.4 bits (2162), Expect = 7.4e-239
Identity = 437/511 (85.52%), Postives = 459/511 (89.82%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA+EGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEE-PKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVP 197
DDLG + EEE PKIE +AP+ GAS PGVG A EV LGDGG V ERVTE Y+Q+P
Sbjct: 61 DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQ------ 257
DLRTNE+A+RGGAGSGPP+GGGGGIRVELGQGSK NELEERSSNNV H PQQ
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
Query: 258 --------QQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGG 317
QQHHHQP H GVLGN G+VEN+GLLRQ GGVNVNGVGGNGYGN+GS GGGGG
Sbjct: 181 QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAGGGGG 240
Query: 318 GTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 377
GTILFVGDLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFYDPSAATACK
Sbjct: 241 GTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 300
Query: 378 EGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN 437
EGMNGH FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ++QAAN Q RRGPNDA GKIGGSN
Sbjct: 301 EGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSN 360
Query: 438 IATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 497
I TGGNYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ
Sbjct: 361 IQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 420
Query: 498 GIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLP 557
GIGATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLP
Sbjct: 421 GIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLP 480
Query: 558 GVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
GVAPHVNPAFFGRGMPM GMGMM SGVDGP
Sbjct: 481 GVAPHVNPAFFGRGMPMNGMGMMAPSGVDGP 510
BLAST of Sgr017913.1 vs. NCBI nr
Match:
XP_031744545.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >XP_031744546.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus] >KAE8645915.1 hypothetical protein Csa_011894 [Cucumis sativus])
HSP 1 Score: 831.6 bits (2147), Expect = 4.0e-237
Identity = 431/513 (84.02%), Postives = 458/513 (89.28%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRK+
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
DDLG KREEEPK+E PV P+ AS PG+G A EVTGLGD GG VSERVTE Y+Q+P
Sbjct: 61 DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP 120
Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQQ----- 257
DLRTNE+A+RGG GSGPPVG G GIRVELGQGSK ELEERSSNNV GH PQQQ
Sbjct: 121 DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPQQQQQQPQ 180
Query: 258 -----------QHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGG 317
QHHHQPP GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GN+GS GGG
Sbjct: 181 PQPQPQPQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGG 240
Query: 318 GGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATA 377
GGGTILFVGDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATA
Sbjct: 241 GGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA 300
Query: 378 CKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGG 437
CKEGMNGH FNGRPCVVAYASPFSVK+MGEAQV+RNQQ++QA N Q RR PN+A GKIGG
Sbjct: 301 CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGG 360
Query: 438 SNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGF 497
++IATGGNYQGGDN+RGSGRG+WGR +AHGMGGRGPAG MR RGGGMGGRGIMGNGGNGF
Sbjct: 361 NSIATGGNYQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGF 420
Query: 498 GQGIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVG 557
GQGIGATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVG
Sbjct: 421 GQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVG 480
Query: 558 LPGVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
LPGVAPHVNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 LPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGP 513
BLAST of Sgr017913.1 vs. ExPASy Swiss-Prot
Match:
Q03250 (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 1.6e-07
Identity = 63/182 (34.62%), Postives = 78/182 (42.86%), Query Frame = 0
Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
FVG L W T D LE +YG V + K +++ +G+S+G+ V F D A EGMN
Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70
Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN--IA 425
G D +GR V A Q + G RG + GG
Sbjct: 71 GQDLDGRSITVNEA-----------------QSRGSGGGGGHRGGGGGGYRSGGGGGYSG 130
Query: 426 TGGNYQGGDNSRGSGRGSWGRG---SAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 483
GG+Y GG R G G G G S+ G GG G R GGG GG G GG+G G
Sbjct: 131 GGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGG 175
BLAST of Sgr017913.1 vs. ExPASy Swiss-Prot
Match:
Q05966 (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 3.7e-07
Identity = 65/184 (35.33%), Postives = 84/184 (45.65%), Query Frame = 0
Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
FVG L W T DAELE ++G V + K +++ +G+S+G+ V F D + + MN
Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68
Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
G + +GR V N+ S+ G RG G+ GG G
Sbjct: 69 GKELDGRTITV------------------NEAQSRGGGGGGGRGGGGYGGRGGGGYGGGG 128
Query: 426 GNY-----QGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 485
G Y GG S G GRG G GS G GG G G R+ GGG GG G+GG G G
Sbjct: 129 GGYGDRRGGGGYGSGGGGRGGGGYGS--GGGGYGGGGGRRD-GGGYGG----GDGGYGGG 167
BLAST of Sgr017913.1 vs. ExPASy Swiss-Prot
Match:
Q03251 (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=RBG8 PE=1 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 3.7e-07
Identity = 62/176 (35.23%), Postives = 82/176 (46.59%), Query Frame = 0
Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
FVG L W T D +L+ ++G V + K +++ SG+S+G+ V F D A E MN
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
G + +GR V + EAQ ++ +G G +G GG + G
Sbjct: 69 GKELDGR-----------VITVNEAQ---SRGSGGGGGGRGGSGGGYRSGGGGGYSGGGG 128
Query: 426 GNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGG--RGIMGNGGNGF 480
G Y GG G R S G GS G GGRG G R GGG GG G G GG G+
Sbjct: 129 GGYSGGGGG-GYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGGGGGGW 169
BLAST of Sgr017913.1 vs. ExPASy Swiss-Prot
Match:
P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 6.3e-07
Identity = 59/175 (33.71%), Postives = 74/175 (42.29%), Query Frame = 0
Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
FVG L W T + LE ++G + + K +++ +G+S+G+ V F D + EGMN
Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70
Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
G D +GR VN Q A GR G G GG G
Sbjct: 71 GQDLDGR----------------SITVNEAQSRGSGAGGGGRGGGGGYRG--GGGYGGGG 130
Query: 426 GNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 481
G Y GG G G G S+ G GG G G R GGG GG G GG G G
Sbjct: 131 GGYGGGRREGGGYSGGGGGYSSRGGGGGGYGGGGRRDGGGYGGGEGGGYGGGGGG 167
BLAST of Sgr017913.1 vs. ExPASy Swiss-Prot
Match:
P49310 (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 1.8e-06
Identity = 61/181 (33.70%), Postives = 75/181 (41.44%), Query Frame = 0
Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
FVG L W T D LE +YG V + K +++ +G+S+G+ V F D + EGMN
Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70
Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
G D +GR V EAQ RG G GG G
Sbjct: 71 GQDLDGRSITV-----------NEAQ---------------SRGSGGGGGGRGGG----G 130
Query: 426 GNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGA 485
G GG G G G +G G G G G G +RGGG GG G G G G G G
Sbjct: 131 GYRSGGGGGYGGGGGGYGGGGREG-GYSGGGGGYSSRGGGGGGYGGGGRRDGGEGGGYGG 160
Query: 486 T 487
+
Sbjct: 191 S 160
BLAST of Sgr017913.1 vs. ExPASy TrEMBL
Match:
A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)
HSP 1 Score: 842.0 bits (2174), Expect = 1.4e-240
Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
D LG KREEEPK+E PV P GAS PG+G A EVTGLGD GG VSERVTE Y+Q+P
Sbjct: 61 DGLGFKREEEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIP 120
Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQ------- 257
DLRTNE+A+RGGAGSGPPVGGG GIRVELGQGSK ELEERSSNNV GH PQ
Sbjct: 121 DLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAPQQPQLQPQ 180
Query: 258 -QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFV 317
Q QHHHQPP GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GNVGS GGG GGT+LFV
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVLFV 240
Query: 318 GDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 377
GDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYDPSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 300
Query: 378 DFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGN 437
FNGRPCVVAYASPFSVK+MGEAQVNRNQQ++QA N Q RR PNDA GKIGGS+IATGGN
Sbjct: 301 IFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGN 360
Query: 438 YQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATP 497
YQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGATP
Sbjct: 361 YQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATP 420
Query: 498 PLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHV 557
PLLHPQSMMGQGFDP+FGAP+GRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480
Query: 558 NPAFFGRGMPMTGMGMMPTSGVDGP 573
NPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 NPAFFGRGMPMNGMGMMPTSGVDGP 505
BLAST of Sgr017913.1 vs. ExPASy TrEMBL
Match:
A0A6J1CCR1 (cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010455 PE=4 SV=1)
HSP 1 Score: 837.4 bits (2162), Expect = 3.6e-239
Identity = 437/511 (85.52%), Postives = 459/511 (89.82%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA+EGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEE-PKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVP 197
DDLG + EEE PKIE +AP+ GAS PGVG A EV LGDGG V ERVTE Y+Q+P
Sbjct: 61 DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQ------ 257
DLRTNE+A+RGGAGSGPP+GGGGGIRVELGQGSK NELEERSSNNV H PQQ
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
Query: 258 --------QQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGG 317
QQHHHQP H GVLGN G+VEN+GLLRQ GGVNVNGVGGNGYGN+GS GGGGG
Sbjct: 181 QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAGGGGG 240
Query: 318 GTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 377
GTILFVGDLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFYDPSAATACK
Sbjct: 241 GTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 300
Query: 378 EGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN 437
EGMNGH FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ++QAAN Q RRGPNDA GKIGGSN
Sbjct: 301 EGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSN 360
Query: 438 IATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 497
I TGGNYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ
Sbjct: 361 IQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 420
Query: 498 GIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLP 557
GIGATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLP
Sbjct: 421 GIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLP 480
Query: 558 GVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
GVAPHVNPAFFGRGMPM GMGMM SGVDGP
Sbjct: 481 GVAPHVNPAFFGRGMPMNGMGMMAPSGVDGP 510
BLAST of Sgr017913.1 vs. ExPASy TrEMBL
Match:
A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1)
HSP 1 Score: 827.4 bits (2136), Expect = 3.7e-236
Identity = 430/505 (85.15%), Postives = 457/505 (90.50%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRK+
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGD-GGPRVSERVTEIYSQVP 197
DDLG KREEEPK+E PV P+ AS PG+G A EVTGLGD GG VSERVTE Y+Q+P
Sbjct: 61 DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP 120
Query: 198 DLRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGH-------PGPQ 257
DLRTNE+A+RGG GSGPPVG G GIRVELGQGSK ELEERSSNNV GH P PQ
Sbjct: 121 DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPPQPQPQPQ 180
Query: 258 -QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFV 317
Q QHHHQPP GVLGN G+VENEGLLRQGGGVNVNGVGGNG+GN+GS GGGGGGTILFV
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGGGGGTILFV 240
Query: 318 GDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGH 377
GDLHWWTTDAELEVELCKYGP+KEVKF+DEKASGKSKGYCQVEFYD SAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300
Query: 378 DFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGN 437
FNGRPCVVAYASPFSVK+MGEAQV+RNQQ++QA N Q RR PN+A GKIGG++IATGGN
Sbjct: 301 IFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATGGN 360
Query: 438 YQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATP 497
YQGGDN+RGSGRG+WGR +AHGMGGRGPAG MR RGGGMGGRGIMGNGGNGFGQGIGATP
Sbjct: 361 YQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATP 420
Query: 498 PLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHV 557
PLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480
Query: 558 NPAFFGRGMPMTGMGMMPTSGVDGP 573
NPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 NPAFFGRGMPMNGMGMMPTSGVDGP 505
BLAST of Sgr017913.1 vs. ExPASy TrEMBL
Match:
A0A6J1ILS2 (cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111476425 PE=4 SV=1)
HSP 1 Score: 826.6 bits (2134), Expect = 6.3e-236
Identity = 431/520 (82.88%), Postives = 453/520 (87.12%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE G G G DQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
DDLG K EEEPK+E V P GAS PG G +V GLGDGG V+ERVTE Y+Q+PD
Sbjct: 61 DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120
Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGPQQQ------ 257
LR NE+A+R GAGSGPP+GGGGGIRVELGQGSK NELEERSSNNV H PQQQ
Sbjct: 121 LRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQQ 180
Query: 258 --------------QHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGS- 317
QHHHQ GGVLGN +VENEGLLRQGGGVNVNGVGGNG+GNVGS
Sbjct: 181 QLQPPAQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGSA 240
Query: 318 ---GGGGGGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFY 377
GGGGGGGTILFVGDLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFY
Sbjct: 241 GGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFY 300
Query: 378 DPSAATACKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPND 437
DPSAATACKEGMNGH FNGRPCVVAYASPFSVKRMGEAQVNRNQQM+QA N Q RRGPND
Sbjct: 301 DPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPND 360
Query: 438 AAGKIGGSNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIM 497
GK+GGS+IATGGNYQGGDN+RGSGRG+WGRG+AHGMGGRGPAGPMRNRGGGMGGRGIM
Sbjct: 361 TVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIM 420
Query: 498 GNGGNGFGQGIGATPPLLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSF 557
GNGGNGFGQG+GATPPLLHPQSMMGQGFDP+FGAPMGRMGTYGGFPGAPAP FSGILSSF
Sbjct: 421 GNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480
Query: 558 PPVGGVGLPGVAPHVNPAFFGRGMPMTGMGMMPTSGVDGP 573
PPVGGVGLPGVAPHVNPAFFGRGMPM GMGMMPTSGVDGP
Sbjct: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGP 520
BLAST of Sgr017913.1 vs. ExPASy TrEMBL
Match:
A0A6J1ITV5 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita maxima OX=3661 GN=LOC111480534 PE=4 SV=1)
HSP 1 Score: 826.6 bits (2134), Expect = 6.3e-236
Identity = 427/503 (84.89%), Postives = 451/503 (89.66%), Query Frame = 0
Query: 78 MDEGERGFGEGVDQIEQFHRNEAISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 137
MDEGE GFGEGVDQI+QFHRNEAISAVA++GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 138 DDLGLKREEEPKIE-STPVAPNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 197
+DLG K EEPK E VAP+ GAS PGVG A EV+GLGDGGP VS R TE Y+Q+PD
Sbjct: 61 EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGATEVSGLGDGGPSVSVRPTEGYNQIPD 120
Query: 198 LRTNEIAVRGGAGSGPPVGGGGGIRVELGQGSKINELEERSSNNVVGHPGP--------Q 257
LRTNE+A+RGGAGSGPP+GGGGGIRVELGQGSK NEL+ERSSNN H P Q
Sbjct: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELDERSSNNAAAHQAPQQQQQQQQQ 180
Query: 258 QQQHHHQPPHGGVLGNAGNVENEGLLRQGGGVNVNGVGGNGYGNVGSGGGGGGGTILFVG 317
QQQHH QPP GG+LGN GNVENEGLLRQGGGVNVNG GGNG GN+G+ GGGGGGTILFVG
Sbjct: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGTILFVG 240
Query: 318 DLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHD 377
DLHWWTTDAELEVELCKYGP+KEVKFFDEKASGKSKGYCQVEFYD SAATACKEGMNGH
Sbjct: 241 DLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHI 300
Query: 378 FNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGNY 437
FNGRPCVVA+ASPFSVKRMGEAQVNRNQQ++QA N Q RRGPN+AAGKIGGSNIATGGNY
Sbjct: 301 FNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNY 360
Query: 438 QGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGIGATPP 497
QG DN+RGSGRG+WGRG+AHGMGGRGPAG MR RGGGMGGRGIMGNGG GFGQGIG TPP
Sbjct: 361 QGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPP 420
Query: 498 LLHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHVN 557
LLHPQSMMGQGFDP FGAPMGRMG YGGFPGAPAP FSGILSSFPPVGGVGLPGVAPHVN
Sbjct: 421 LLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVN 480
Query: 558 PAFFGRGMPMTGMGMMPTSGVDG 572
PAFFGRGMPM GMGMMP+SGVDG
Sbjct: 481 PAFFGRGMPMNGMGMMPSSGVDG 503
BLAST of Sgr017913.1 vs. TAIR 10
Match:
AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 493.4 bits (1269), Expect = 2.4e-139
Identity = 303/521 (58.16%), Postives = 350/521 (67.18%), Query Frame = 0
Query: 86 GEGVDQIEQFHRNEAISAVAEEGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGLKR 145
G+G DQ++QFH+NEAISAVA++GF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G +
Sbjct: 4 GDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAGSRN 63
Query: 146 EEEPKI---ESTPVAPNLG-----ASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 205
EE+ K+ E V P LG S PG+ + E + G S T++
Sbjct: 64 EEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVASSG 123
Query: 206 LRTNEIAVR-------GGAGSGPPVGGGGGIRVELGQGS-KINELEERSSNNVVGHPGPQ 265
E+ V GG G+G GGG+RVELGQ S + N+LE NN+
Sbjct: 124 YGAQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRGNNI------- 183
Query: 266 QQQHHHQPPHGGVLGNAGNVEN------EGLLRQGGGVNVNGVGGN----GYGNVGSGGG 325
Q PP VLGN N+ G + G G N+ G G N G G+GGG
Sbjct: 184 -SQGLLPPP--PVLGNNENLMRPVMGNVNGGIPPGPGSNMVGNGANIAMPGVVGGGTGGG 243
Query: 326 GGGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAAT 385
GGGG LFVGDLHWWTTDAELE ELCKYG VKEVKFFDEKASGKSKGYCQVEFYDP AA+
Sbjct: 244 GGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDPVAAS 303
Query: 386 ACKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGK-- 445
ACK+ +NG+ FNGRPCVV YASP+SVKRMGEAQVNR QQ R GP D K
Sbjct: 304 ACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPPSKPL 363
Query: 446 -----IGGSNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGI 505
+N A GGN+QGG+N RG GRG+WGRG+A GMGGRGP GPMRNR GMGGRG+
Sbjct: 364 VANNNNNNNNNAIGGNFQGGEN-RGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGMGGRGL 423
Query: 506 MGNGGNGFGQGIGATPPL-LHPQSMMGQGFDPAFGAPMGRMGTYGGFPGAPAPHFSGILS 565
MGNG GFGQG+G PP+ + Q MMGQGF+ AFG PM RMG YGGFPGAP P F G+LS
Sbjct: 424 MGNG--GFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPMARMGGYGGFPGAPGPQFPGLLS 483
Query: 566 SFPPVGGVGLPGVAPHVNPAFFGRGMPMTGMGMMPTSGVDG 572
SFPPVGGVGLPGVAPHVNPAFFGRGMPM GMGMMP +GVDG
Sbjct: 484 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDG 507
BLAST of Sgr017913.1 vs. TAIR 10
Match:
AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 337.0 bits (863), Expect = 2.9e-92
Identity = 225/425 (52.94%), Postives = 266/425 (62.59%), Query Frame = 0
Query: 86 GEGVDQIEQFHRNEAISAVAEEGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGLKR 145
G+G DQ++QFH+NEAISAVA++GF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G +
Sbjct: 4 GDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAGSRN 63
Query: 146 EEEPKI---ESTPVAPNLG-----ASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPD 205
EE+ K+ E V P LG S PG+ + E + G S T++
Sbjct: 64 EEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVASSG 123
Query: 206 LRTNEIAVR-------GGAGSGPPVGGGGGIRVELGQGS-KINELEERSSNNVVGHPGPQ 265
E+ V GG G+G GGG+RVELGQ S + N+LE NN+
Sbjct: 124 YGAQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRGNNI------- 183
Query: 266 QQQHHHQPPHGGVLGNAGNVEN------EGLLRQGGGVNVNGVGGN----GYGNVGSGGG 325
Q PP VLGN N+ G + G G N+ G G N G G+GGG
Sbjct: 184 -SQGLLPPP--PVLGNNENLMRPVMGNVNGGIPPGPGSNMVGNGANIAMPGVVGGGTGGG 243
Query: 326 GGGGTILFVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAAT 385
GGGG LFVGDLHWWTTDAELE ELCKYG VKEVKFFDEKASGKSKGYCQVEFYDP AA+
Sbjct: 244 GGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDPVAAS 303
Query: 386 ACKEGMNGHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGK-- 445
ACK+ +NG+ FNGRPCVV YASP+SVKRMGEAQVNR QQ R GP D K
Sbjct: 304 ACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPPSKPL 363
Query: 446 -----IGGSNIATGGNYQGGDNSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGI 477
+N A GGN+QGG+N RG GRG+WGRG+A GMGGRGP GPMRNR GMGGR
Sbjct: 364 VANNNNNNNNNAIGGNFQGGEN-RGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGMGGRAA 413
BLAST of Sgr017913.1 vs. TAIR 10
Match:
AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 220.7 bits (561), Expect = 3.0e-57
Identity = 194/494 (39.27%), Postives = 256/494 (51.82%), Query Frame = 0
Query: 101 ISAVAEEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGLKREEEPKIES----TPVA 160
I A+A+E +G D+DEY+DLY+DVNVGE F Q+ + +++
Sbjct: 21 IPALADEELMG-DDDEYDDLYSDVNVGESFFQAHNQPQPPAQVNTSNASLQAQNSHVAAE 80
Query: 161 PNLGASTPGVGSAAAEVTGLGDGGPRVSERVTEIYSQVPDLRTNEIAVRGGAGSGPPVGG 220
P +G + G G G G + +++Y Q G
Sbjct: 81 PRMGIVSGGTVEGKYRNDG-GHNGISGPDTRSDVYPQASSF------------------G 140
Query: 221 GGGIRVELGQGSKINELEERSSNNVVGHPGPQQQQHHHQPPHGGVLGNAGNV------EN 280
G+ +++ + N++ ++ S VV ++H G GNA NV +
Sbjct: 141 AKGLNIDI----QSNKIAQQGSTTVV--------LNNH-----GFSGNAVNVPEMPVHNS 200
Query: 281 EGLLRQGG---GVNVNGVGGNGYGN---VGSGGGGGGGTILFVGDLHWWTTDAELEVELC 340
G QG V+ V N N S G T+LFVG+LHWWTTDAE+E L
Sbjct: 201 YGAPPQGAQQIPVSQMSVNPNVMMNKSPTQSFVVDNGNTMLFVGELHWWTTDAEIESVLS 260
Query: 341 KYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHDFNGRPCVVAYASPFSV 400
+YG VKE+KFFDE+ SGKSKGYCQVEFYD +AA ACKEGMNG FNG+ CVVA+ASP ++
Sbjct: 261 QYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEGMNGFIFNGKACVVAFASPETL 320
Query: 401 KRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATGGNYQGGDNSRGSGRGSWGR 460
K+MG RNQ +Q Q RR N+ G+ G+N N Q GD R GRG + R
Sbjct: 321 KQMGANFTGRNQGQNQ---IQNRRPLNEGMGR--GNNNNNNMNTQNGDGGRNYGRGGFAR 380
Query: 461 GSAHGMGGRGPAGPMRNRGGGMGGRGI----MGNGGNGFGQGIG--ATPPLLHPQSMMGQ 520
G GMG RG A GG M GRG+ G+G +G G+ A ++HPQ MMG
Sbjct: 381 G-GQGMGNRGGAW-----GGAMRGRGVNNMASGSGAGPYGPGLAGPAFGGMMHPQGMMGA 440
Query: 521 -GFDPAFGAPMGRMGTYGGFPGAPAPHFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMP 572
GFDP F MGR YGG+ G P G+ S+P V +G+ G+APHVNPAFFG
Sbjct: 441 GGFDPTF---MGRGAGYGGYSGIAYP---GMPHSYPGVNAMGMVGIAPHVNPAFFG---- 455
BLAST of Sgr017913.1 vs. TAIR 10
Match:
AT2G21660.2 (cold, circadian rhythm, and rna binding 2 )
HSP 1 Score: 60.8 bits (146), Expect = 4.0e-09
Identity = 63/174 (36.21%), Postives = 76/174 (43.68%), Query Frame = 0
Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
FVG L W T D LE +YG V + K +++ +G+S+G+ V F D A EGMN
Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70
Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSNIATG 425
G D +GR V A Q + G RG G GG G
Sbjct: 71 GQDLDGRSITVNEA-----------------QSRGSGGGGGHRGGGSYGG--GGGRREGG 130
Query: 426 GNYQGGD---NSRGSGRGSWGRGSAHGMGGRGPAGPMRNRGGGMGGRGIMGNGG 477
G Y GG +SRG G GS+G G G GG G GGG GG G G GG
Sbjct: 131 GGYSGGGGGYSSRGGGGGSYGGGRREGGGGYG-----GGEGGGYGGSG--GGGG 158
BLAST of Sgr017913.1 vs. TAIR 10
Match:
AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )
HSP 1 Score: 59.3 bits (142), Expect = 1.2e-08
Identity = 63/182 (34.62%), Postives = 78/182 (42.86%), Query Frame = 0
Query: 306 FVGDLHWWTTDAELEVELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMN 365
FVG L W T D LE +YG V + K +++ +G+S+G+ V F D A EGMN
Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70
Query: 366 GHDFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQAANTQGRRGPNDAAGKIGGSN--IA 425
G D +GR V A Q + G RG + GG
Sbjct: 71 GQDLDGRSITVNEA-----------------QSRGSGGGGGHRGGGGGGYRSGGGGGYSG 130
Query: 426 TGGNYQGGDNSRGSGRGSWGRG---SAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFG 483
GG+Y GG R G G G G S+ G GG G R GGG GG G GG+G G
Sbjct: 131 GGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGG 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038897335.1 | 1.0e-240 | 85.77 | cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispid... | [more] |
XP_038897113.1 | 1.3e-240 | 86.56 | uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida] | [more] |
TYK07956.1 | 3.0e-240 | 86.14 | cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. mak... | [more] |
XP_022139595.1 | 7.4e-239 | 85.52 | cleavage and polyadenylation specificity factor subunit 6 [Momordica charantia] | [more] |
XP_031744545.1 | 4.0e-237 | 84.02 | cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sat... | [more] |
Match Name | E-value | Identity | Description | |
Q03250 | 1.6e-07 | 34.62 | Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 ... | [more] |
Q05966 | 3.7e-07 | 35.33 | Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1 | [more] |
Q03251 | 3.7e-07 | 35.23 | Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=RBG8 PE=1 ... | [more] |
P49311 | 6.3e-07 | 33.71 | Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1 | [more] |
P49310 | 1.8e-06 | 33.70 | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CC60 | 1.4e-240 | 86.14 | Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m... | [more] |
A0A6J1CCR1 | 3.6e-239 | 85.52 | cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia... | [more] |
A0A0A0K3G6 | 3.7e-236 | 85.15 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV... | [more] |
A0A6J1ILS2 | 6.3e-236 | 82.88 | cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxi... | [more] |
A0A6J1ITV5 | 6.3e-236 | 84.89 | cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita... | [more] |