Sed0028072.1 (mRNA) Chayote v1

Overview


Name	Sed0028072.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	fatty acid desaturase 4, chloroplastic
Location	LG13: 15511559 .. 15512503 (-)
Sequence length	945
RNA-Seq Expression	Sed0028072.1
Synteny	Sed0028072.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATCTTAGCTCAAACCAAGTTCCTTTCGAGCTCCCGAATGCATGTTAATTTTTGCAGCCCTCCAGTTCCCTGCAAAATTGTCTACTGCATTGCCAATACCACAGTCAATGTTGCTTCTTCTGGTGCCACCGCCATCCAACCCAAGAAAGGAGATGGCCAACAACTGATTAAACGTGAGGTTATCTCTCCTACTCCACCTGCATCCGCCTATTACTCTGTTCTTAATGACCCGAGTTTAAGATCGACCTGGGGTCATCGTGCATGGGTGGCCAGTGGGTGCACCACAGTGCTCATCTCTGTGGCAAAATCAGTAGAAGGTGCAGCCAATTCACATATCTGGCTTGAGCCTGCAATAGCAGCATTGGTGGGCTACATTTTAGCTGACCTTGGATCAGGAGTTTACCATTGGGGCATTGATAACTATGGTGATGCCGCTACTCCAATCTTCGGCACCCAAATAGAAGGGTTCCAAGGCCATCACAAGTGGCCATGGACAATCACGAAGCGTCAGTTCGCCAACAATTTGTATGCTTTGGCACAAGCTGTGACCTTTACTGTACTTCCAATAAGCTTTGCATTTGATGACCCCATTCTACATGCCTTTGTTTCTGTATGCTCAGGTTGCATAATGTTTAGCCAACAGTTTCATGCATGGGCTCATGGAAAAAAGAGTCAACTACCGCCACTCGTGCTAGCAATGCAAGATGCTGGCTTGCTCGTGTCACGAATGCAGCATTCTGCACATCATCACCCACCCTATAACAACAACTATTGCATAGTAAGTGGAATTTGGAATAAGCTTTTGGATGAAACAAAGGTTTTTGAGGCATTAGAGATGATCTTGTTCTTCAAGTTTGGGGTGAGACCAAGATCTTGGACTGAGCCTAATTCTGAATGGACTGAGGAAACCAAGATTCTAGAACAAACTATATCCCATTAA

mRNA sequence

ATGTCAATCTTAGCTCAAACCAAGTTCCTTTCGAGCTCCCGAATGCATGTTAATTTTTGCAGCCCTCCAGTTCCCTGCAAAATTGTCTACTGCATTGCCAATACCACAGTCAATGTTGCTTCTTCTGGTGCCACCGCCATCCAACCCAAGAAAGGAGATGGCCAACAACTGATTAAACGTGAGGTTATCTCTCCTACTCCACCTGCATCCGCCTATTACTCTGTTCTTAATGACCCGAGTTTAAGATCGACCTGGGGTCATCGTGCATGGGTGGCCAGTGGGTGCACCACAGTGCTCATCTCTGTGGCAAAATCAGTAGAAGGTGCAGCCAATTCACATATCTGGCTTGAGCCTGCAATAGCAGCATTGGTGGGCTACATTTTAGCTGACCTTGGATCAGGAGTTTACCATTGGGGCATTGATAACTATGGTGATGCCGCTACTCCAATCTTCGGCACCCAAATAGAAGGGTTCCAAGGCCATCACAAGTGGCCATGGACAATCACGAAGCGTCAGTTCGCCAACAATTTGTATGCTTTGGCACAAGCTGTGACCTTTACTGTACTTCCAATAAGCTTTGCATTTGATGACCCCATTCTACATGCCTTTGTTTCTGTATGCTCAGGTTGCATAATGTTTAGCCAACAGTTTCATGCATGGGCTCATGGAAAAAAGAGTCAACTACCGCCACTCGTGCTAGCAATGCAAGATGCTGGCTTGCTCGTGTCACGAATGCAGCATTCTGCACATCATCACCCACCCTATAACAACAACTATTGCATAGTAAGTGGAATTTGGAATAAGCTTTTGGATGAAACAAAGGTTTTTGAGGCATTAGAGATGATCTTGTTCTTCAAGTTTGGGGTGAGACCAAGATCTTGGACTGAGCCTAATTCTGAATGGACTGAGGAAACCAAGATTCTAGAACAAACTATATCCCATTAA

Coding sequence (CDS)

ATGTCAATCTTAGCTCAAACCAAGTTCCTTTCGAGCTCCCGAATGCATGTTAATTTTTGCAGCCCTCCAGTTCCCTGCAAAATTGTCTACTGCATTGCCAATACCACAGTCAATGTTGCTTCTTCTGGTGCCACCGCCATCCAACCCAAGAAAGGAGATGGCCAACAACTGATTAAACGTGAGGTTATCTCTCCTACTCCACCTGCATCCGCCTATTACTCTGTTCTTAATGACCCGAGTTTAAGATCGACCTGGGGTCATCGTGCATGGGTGGCCAGTGGGTGCACCACAGTGCTCATCTCTGTGGCAAAATCAGTAGAAGGTGCAGCCAATTCACATATCTGGCTTGAGCCTGCAATAGCAGCATTGGTGGGCTACATTTTAGCTGACCTTGGATCAGGAGTTTACCATTGGGGCATTGATAACTATGGTGATGCCGCTACTCCAATCTTCGGCACCCAAATAGAAGGGTTCCAAGGCCATCACAAGTGGCCATGGACAATCACGAAGCGTCAGTTCGCCAACAATTTGTATGCTTTGGCACAAGCTGTGACCTTTACTGTACTTCCAATAAGCTTTGCATTTGATGACCCCATTCTACATGCCTTTGTTTCTGTATGCTCAGGTTGCATAATGTTTAGCCAACAGTTTCATGCATGGGCTCATGGAAAAAAGAGTCAACTACCGCCACTCGTGCTAGCAATGCAAGATGCTGGCTTGCTCGTGTCACGAATGCAGCATTCTGCACATCATCACCCACCCTATAACAACAACTATTGCATAGTAAGTGGAATTTGGAATAAGCTTTTGGATGAAACAAAGGTTTTTGAGGCATTAGAGATGATCTTGTTCTTCAAGTTTGGGGTGAGACCAAGATCTTGGACTGAGCCTAATTCTGAATGGACTGAGGAAACCAAGATTCTAGAACAAACTATATCCCATTAA

Protein sequence

MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKREVISPTPPASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWLEPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANNLYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQDAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTEPNSEWTEETKILEQTISH

Homology

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BLAST of Sed0028072.1 vs. NCBI nr
Match: XP_038905900.1 (fatty acid desaturase 4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 552.7 bits (1423), Expect = 2.0e-153
Identity = 262/318 (82.39%), Postives = 285/318 (89.62%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR HVN CS P+P ++ YCIAN+TVNVA +GAT   PK  DGQ LI+R
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVFYCIANSTVNVA-AGATTTNPKHADGQLLIER 60

Query: 61  EVISPTP----PASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           EVISPTP     +S YYSVLNDPSLRSTW HRAWVASGCTTVL+S+AKS+ GAA+SHIWL
Sbjct: 61  EVISPTPLTLVNSSTYYSVLNDPSLRSTWSHRAWVASGCTTVLVSLAKSIVGAASSHIWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSGVYHWGIDNYG+ +TPIFGTQIE FQGHHKWPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGNVSTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           +YALA+AVTF VLP+S AFDDPILH FV VCSGCIMFSQQFHAWAHGKKS+LPPLV+AMQ
Sbjct: 181 MYALARAVTFAVLPVSLAFDDPILHGFVGVCSGCIMFSQQFHAWAHGKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           DAGLLVSR QHSAHH PPYNNNYCIVSGIWNK+LDETKVFEALEMILFFK GVRPRSWTE
Sbjct: 241 DAGLLVSRRQHSAHHRPPYNNNYCIVSGIWNKILDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           PNS WTEET+I+EQT +H
Sbjct: 301 PNSAWTEETEIIEQTTAH 317

[Close]

BLAST of Sed0028072.1 vs. NCBI nr
Match: XP_004152938.1 (fatty acid desaturase 4, chloroplastic [Cucumis sativus] >KGN56137.1 hypothetical protein Csa_011564 [Cucumis sativus])

HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149
Identity = 257/318 (80.82%), Postives = 279/318 (87.74%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR HVN CS P+P ++VYCIANTTVN       A  PK  DGQ +I+R
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVVYCIANTTVN-----GVATSPKHADGQLVIER 60

Query: 61  EVISPTP----PASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           EVISPTP     +S YYSVLNDPSLRSTW HRAWVA GCTTVLIS+AKS+ GAA+SHIWL
Sbjct: 61  EVISPTPLTFVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSGVYHWGIDNYGDA+TPIFGTQIE FQGHHKWPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           LYALA+AVTF VLP+S A DDPILH FV +CSGCIMFSQQFHAWAH KKS+LPPLV+AMQ
Sbjct: 181 LYALARAVTFAVLPVSLAIDDPILHGFVGMCSGCIMFSQQFHAWAHSKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           +AGLLVSR QHS HH PPYNNNYCIVSGIWNKLLDETK+FEALEMIL+FK G+RPRSWTE
Sbjct: 241 NAGLLVSRTQHSTHHRPPYNNNYCIVSGIWNKLLDETKLFEALEMILYFKLGLRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           PNSEWTEET+ILEQT +H
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Sed0028072.1 vs. NCBI nr
Match: XP_022150986.1 (fatty acid desaturase 4, chloroplastic [Momordica charantia])

HSP 1 Score: 536.6 bits (1381), Expect = 1.5e-148
Identity = 258/314 (82.17%), Postives = 280/314 (89.17%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR  VN  SPP+P KIVYC+AN TV+VA++GAT  +PK  DGQ +IKR
Sbjct: 1   MSILAQNKFLLSSRTRVNPLSPPIPRKIVYCVAN-TVDVAAAGATTTKPKHADGQLVIKR 60

Query: 61  EVISP---TPPASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWLE 120
           E +SP      AS Y+ VLNDPSLRSTWGHRAWVASGCTTVLIS+AKS+ GAA+SHIWLE
Sbjct: 61  EFVSPPLTLGKASTYHYVLNDPSLRSTWGHRAWVASGCTTVLISLAKSIVGAASSHIWLE 120

Query: 121 PAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANNL 180
           P +AALVGYILADLGSGVYHWGIDNYGDA+TPIFGTQIE FQGHHKWPWTITKRQFANNL
Sbjct: 121 PTLAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANNL 180

Query: 181 YALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQD 240
           YALA+AVTF VLPI+ AF DPILH FVSVCSGCIMFSQQFHAWAH KKSQLPPLV+AMQD
Sbjct: 181 YALARAVTFVVLPINLAFGDPILHGFVSVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQD 240

Query: 241 AGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTEP 300
           AGLLVSRMQHSAHH PPYNNNYCIVSGIWN+LLDETKVFEA EMILFFK GVRPRSW+EP
Sbjct: 241 AGLLVSRMQHSAHHRPPYNNNYCIVSGIWNQLLDETKVFEAFEMILFFKLGVRPRSWSEP 300

Query: 301 NSEWTEETKILEQT 312
           N+EWTEET+ +EQT
Sbjct: 301 NTEWTEETETVEQT 313

[Close]

BLAST of Sed0028072.1 vs. NCBI nr
Match: KAA0033959.1 (fatty acid desaturase 4 [Cucumis melo var. makuwa] >TYK02585.1 fatty acid desaturase 4 [Cucumis melo var. makuwa])

HSP 1 Score: 534.3 bits (1375), Expect = 7.3e-148
Identity = 255/318 (80.19%), Postives = 277/318 (87.11%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR HVN CS P P ++VYCIANTTVN       A   K GDGQ +I+R
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPTPRRVVYCIANTTVN-----GVATSSKHGDGQLVIER 60

Query: 61  EVISPTP----PASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           EVISP+P     +S YYSVLNDPSLRSTW HRAWVA GCTTVLIS+AKS+ GAA+S IWL
Sbjct: 61  EVISPSPLTSVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSRIWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSGVYHWGIDNYG A+TPIFGTQIE FQGHHKWPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGGASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           LYALA+AVTF VLP+S AFDDP LH FV VCSGCIMFSQQFHAWAHGKKS++PPLV+AMQ
Sbjct: 181 LYALARAVTFAVLPVSLAFDDPTLHGFVGVCSGCIMFSQQFHAWAHGKKSEIPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           DAGLLVSR QH+ HH PPYNNNYCIVSGIWN+LLDETKVFEALEMIL+FK G+RPRSWTE
Sbjct: 241 DAGLLVSRTQHATHHRPPYNNNYCIVSGIWNQLLDETKVFEALEMILYFKLGLRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           PNSEWTEET+ILEQT +H
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Sed0028072.1 vs. NCBI nr
Match: XP_008463431.1 (PREDICTED: fatty acid desaturase 4, chloroplastic [Cucumis melo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.6e-147
Identity = 253/318 (79.56%), Postives = 278/318 (87.42%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR HVN CS P P ++VYCIANTTVN   + +     K GDGQ +I+R
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPTPRRVVYCIANTTVNGVGTSS-----KHGDGQLVIER 60

Query: 61  EVISPTP----PASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           EVISP+P     +S YYSVLNDPSLRSTW HRAWVA GCTTVLIS+AKS+ GAA+S IWL
Sbjct: 61  EVISPSPLTSVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSRIWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSG+YHWGIDNYG A+TPIFGTQIE FQGHHKWPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGIYHWGIDNYGGASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           LYALA+AVTF VLP+S AFDDP LH FV VCSGCIMFSQQFHAWAHGKKS++PPLV+AMQ
Sbjct: 181 LYALARAVTFAVLPVSLAFDDPTLHGFVGVCSGCIMFSQQFHAWAHGKKSEIPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           DAGLLVSR QH+ HH PPYNNNYCIVSGIWN+LLDETKVFEALEMIL+FK G+RPRSWTE
Sbjct: 241 DAGLLVSRTQHATHHRPPYNNNYCIVSGIWNQLLDETKVFEALEMILYFKLGLRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           PNSEWTEET+ILEQT +H
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Sed0028072.1 vs. ExPASy Swiss-Prot
Match: Q9SZ42 (Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4 PE=1 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.2e-105
Identity = 178/287 (62.02%), Postives = 222/287 (77.35%), Query Frame = 0


Query: 23  PVPCKIVYCIANTTVNVASSGATAIQPKK--GDGQQLIKREVISPTPPASAYYSVLNDPS 82
           P P +    +   TVN+  S   ++Q  K   + ++L+  + ++ +PP S      NDP+
Sbjct: 39  PQPNREKLLVEQRTVNLPLSNDQSLQSTKPRPNREKLVVEQRLA-SPPLS------NDPT 98

Query: 83  LRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWLEPAIAALVGYILADLGSGVYHWGI 142
           L+STW HR WVA+GCTT+ +S+AKSV G  +SH+ LEPA+A   GYILADLGSGVYHW I
Sbjct: 99  LKSTWTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYHWAI 158

Query: 143 DNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANNLYALAQAVTFTVLPISFAFDDPIL 202
           DNYGD +TP+ GTQIE FQGHHKWPWTIT+RQFANNL+ALAQ +TFTVLP+  AF+DP+ 
Sbjct: 159 DNYGDESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFNDPVF 218

Query: 203 HAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQDAGLLVSRMQHSAHHHPPYNNNYC 262
           H FV   + CI+FSQQFHAWAHG KS+LPPLV+A+QD GLLVSR QH+ HH  PYNNNYC
Sbjct: 219 HGFVCTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNNNYC 278

Query: 263 IVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTEPNSEWTEETKI 308
           IVSG WN +LDE+KVFEALEM+ +F+ GVRPRSW+EPNS+W EET+I
Sbjct: 279 IVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]

BLAST of Sed0028072.1 vs. ExPASy Swiss-Prot
Match: O04584 (Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4L1 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 7.9e-97
Identity = 160/272 (58.82%), Postives = 203/272 (74.63%), Query Frame = 0


Query: 35  TTVNVASSGATAIQPKKGDGQQLIKREVISPTPPASAYYSVLNDPSLRSTWGHRAWVASG 94
           T V V  S  T   P+      ++++ +++P        S  NDP+L+STW HR WVA+G
Sbjct: 24  TRVRVTCS-VTTTNPQLNHENLVVEKRLVNPP------LSKNNDPTLQSTWTHRLWVAAG 83

Query: 95  CTTVLISVAKSVEGAANSHIWLEPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQ 154
            TT+  S AKS+ G   SH+WL+PA+A   GY+ ADLGSGVYHW IDNYG A+TPI G Q
Sbjct: 84  STTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWAIDNYGGASTPIVGAQ 143

Query: 155 IEGFQGHHKWPWTITKRQFANNLYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFS 214
           +E  QGHHK+PWTITKRQFANN Y +A+A+TF VLP++ A ++P+ H+FVS  + CI+ S
Sbjct: 144 LEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPLFHSFVSTFAFCILLS 203

Query: 215 QQFHAWAHGKKSQLPPLVLAMQDAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETK 274
           QQFHAWAHG KS+LPPLV+A+QD GLLVSR  H  HH  PYN+NYC+VSG WNK+LDE+ 
Sbjct: 204 QQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNYCVVSGAWNKVLDESN 263

Query: 275 VFEALEMILFFKFGVRPRSWTEPNSEWTEETK 307
           +F+ALEM LFF+FGVRP SW EPNS+WTEET+
Sbjct: 264 LFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]

BLAST of Sed0028072.1 vs. ExPASy Swiss-Prot
Match: O81006 (Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4L2 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.9e-91
Identity = 145/224 (64.73%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 77  NDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWLEPAIAALVGYILADLGSGVY 136
           NDP+L+STW HR WVA+GCTTV +S +KS+ GA  SH+WLEP++A   GYILADLGSGVY
Sbjct: 56  NDPTLQSTWTHRLWVAAGCTTVFVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVY 115

Query: 137 HWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANNLYALAQAVTFTVLPISFAFD 196
           HW  DNYGD +TP+ G  IE  Q HHK PWTITKRQFANNL+ +A+  T  VLP+  AFD
Sbjct: 116 HWATDNYGDESTPLVGIHIEDSQDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFD 175

Query: 197 DPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQDAGLLVSRMQHSAHHHPPYN 256
           D ++H FVS+ + C++F Q FHAWAHG KS+LPPLV+ +QD GLLVSR+ H  HH  PYN
Sbjct: 176 DHVVHGFVSMFAFCVLFCQLFHAWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYN 235

Query: 257 NNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTEPNSE 301
           NNYC+VSG+WNK+LDE+ VF+A+EM+L+ + GVRPRSWTEPN E
Sbjct: 236 NNYCVVSGVWNKVLDESNVFKAMEMVLYIQLGVRPRSWTEPNYE 279

[Close]

BLAST of Sed0028072.1 vs. ExPASy Swiss-Prot
Match: Q9AE87 (Plasmanylethanolamine desaturase OS=Myxococcus xanthus OX=34 GN=carF PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.1e-16
Identity = 60/181 (33.15%), Postives = 81/181 (44.75%), Query Frame = 0


Query: 121 AALVGYILADLGSGVYHWGIDNYGDAATPIFG-TQIEGFQGHHKWPWTITKRQFA----- 180
           A L+GY+ AD  SG  HW  D +G    P+ G   I  F+ HH     IT+  F      
Sbjct: 62  AVLLGYLAADFVSGFVHWMGDTWGSTEMPVLGKALIRPFREHHVDEKAITRHDFVETNGN 121

Query: 181 NNLYALAQAVTFTVLPIS---FAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPL 240
           N L +L  A+    LP+S   + F    L A +      +M + QFH W+H      P L
Sbjct: 122 NCLISLPVAIIALCLPMSGPGWVFCASFLGAMIF----WVMATNQFHKWSH--MDSPPAL 181

Query: 241 VLAMQDAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRP 293
           V  +Q   L++    H  HH  PYN  YCI  G  NK L     F   E ++ +  G+ P
Sbjct: 182 VGFLQRVHLILPPDHHRIHHTKPYNKYYCITVGWMNKPLTMVHFFPTAERLITWATGLLP 236

[Close]

BLAST of Sed0028072.1 vs. ExPASy Swiss-Prot
Match: Q5UR78 (Probable fatty acid desaturase MIMI_L630 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L630 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-12
Identity = 50/179 (27.93%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 116 LEPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFG-TQIEGFQGHHKWPWTITKRQFA 175
           ++  I  ++GY+L+D   G+YHW  D Y    TPI G T I G + HH  P  + +    
Sbjct: 6   IDKFIQIVLGYLLSDFIMGIYHWIKDTYFSPFTPIIGKTFIWGSRLHHVRPRYVLEFTDK 65

Query: 176 NNLYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLA 235
           + +   A+     + P+ F F    L  F+      I  +   H + H    + P     
Sbjct: 66  DLIIDSAKWTLSWIGPLFFWFG---LTPFLVTMFIMISLNDVIHKYTHEIDHERPMWATI 125

Query: 236 MQDAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRS 294
           +Q  G   S  +H  HH  P+  NYC V+   N  L++  ++  LE  + +  GV+PR+
Sbjct: 126 LQRIGFFQSHDEHHLHHIAPHEINYCPVTPYVNIWLEKINLWRKLESFVEYLTGVKPRA 181

[Close]

BLAST of Sed0028072.1 vs. ExPASy TrEMBL
Match: A0A0A0L6B9 (TMEM189_B_dmain domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077710 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.4e-150
Identity = 257/318 (80.82%), Postives = 279/318 (87.74%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR HVN CS P+P ++VYCIANTTVN       A  PK  DGQ +I+R
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVVYCIANTTVN-----GVATSPKHADGQLVIER 60

Query: 61  EVISPTP----PASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           EVISPTP     +S YYSVLNDPSLRSTW HRAWVA GCTTVLIS+AKS+ GAA+SHIWL
Sbjct: 61  EVISPTPLTFVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSGVYHWGIDNYGDA+TPIFGTQIE FQGHHKWPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           LYALA+AVTF VLP+S A DDPILH FV +CSGCIMFSQQFHAWAH KKS+LPPLV+AMQ
Sbjct: 181 LYALARAVTFAVLPVSLAIDDPILHGFVGMCSGCIMFSQQFHAWAHSKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           +AGLLVSR QHS HH PPYNNNYCIVSGIWNKLLDETK+FEALEMIL+FK G+RPRSWTE
Sbjct: 241 NAGLLVSRTQHSTHHRPPYNNNYCIVSGIWNKLLDETKLFEALEMILYFKLGLRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           PNSEWTEET+ILEQT +H
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Sed0028072.1 vs. ExPASy TrEMBL
Match: A0A6J1DD70 (fatty acid desaturase 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019014 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 7.1e-149
Identity = 258/314 (82.17%), Postives = 280/314 (89.17%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR  VN  SPP+P KIVYC+AN TV+VA++GAT  +PK  DGQ +IKR
Sbjct: 1   MSILAQNKFLLSSRTRVNPLSPPIPRKIVYCVAN-TVDVAAAGATTTKPKHADGQLVIKR 60

Query: 61  EVISP---TPPASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWLE 120
           E +SP      AS Y+ VLNDPSLRSTWGHRAWVASGCTTVLIS+AKS+ GAA+SHIWLE
Sbjct: 61  EFVSPPLTLGKASTYHYVLNDPSLRSTWGHRAWVASGCTTVLISLAKSIVGAASSHIWLE 120

Query: 121 PAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANNL 180
           P +AALVGYILADLGSGVYHWGIDNYGDA+TPIFGTQIE FQGHHKWPWTITKRQFANNL
Sbjct: 121 PTLAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANNL 180

Query: 181 YALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQD 240
           YALA+AVTF VLPI+ AF DPILH FVSVCSGCIMFSQQFHAWAH KKSQLPPLV+AMQD
Sbjct: 181 YALARAVTFVVLPINLAFGDPILHGFVSVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQD 240

Query: 241 AGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTEP 300
           AGLLVSRMQHSAHH PPYNNNYCIVSGIWN+LLDETKVFEA EMILFFK GVRPRSW+EP
Sbjct: 241 AGLLVSRMQHSAHHRPPYNNNYCIVSGIWNQLLDETKVFEAFEMILFFKLGVRPRSWSEP 300

Query: 301 NSEWTEETKILEQT 312
           N+EWTEET+ +EQT
Sbjct: 301 NTEWTEETETVEQT 313

[Close]

BLAST of Sed0028072.1 vs. ExPASy TrEMBL
Match: A0A5A7SXQ7 (Fatty acid desaturase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00380 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.5e-148
Identity = 255/318 (80.19%), Postives = 277/318 (87.11%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR HVN CS P P ++VYCIANTTVN       A   K GDGQ +I+R
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPTPRRVVYCIANTTVN-----GVATSSKHGDGQLVIER 60

Query: 61  EVISPTP----PASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           EVISP+P     +S YYSVLNDPSLRSTW HRAWVA GCTTVLIS+AKS+ GAA+S IWL
Sbjct: 61  EVISPSPLTSVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSRIWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSGVYHWGIDNYG A+TPIFGTQIE FQGHHKWPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGGASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           LYALA+AVTF VLP+S AFDDP LH FV VCSGCIMFSQQFHAWAHGKKS++PPLV+AMQ
Sbjct: 181 LYALARAVTFAVLPVSLAFDDPTLHGFVGVCSGCIMFSQQFHAWAHGKKSEIPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           DAGLLVSR QH+ HH PPYNNNYCIVSGIWN+LLDETKVFEALEMIL+FK G+RPRSWTE
Sbjct: 241 DAGLLVSRTQHATHHRPPYNNNYCIVSGIWNQLLDETKVFEALEMILYFKLGLRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           PNSEWTEET+ILEQT +H
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Sed0028072.1 vs. ExPASy TrEMBL
Match: A0A1S3CJN9 (fatty acid desaturase 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501595 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.8e-148
Identity = 253/318 (79.56%), Postives = 278/318 (87.42%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSILAQ KFL SSR HVN CS P P ++VYCIANTTVN   + +     K GDGQ +I+R
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPTPRRVVYCIANTTVNGVGTSS-----KHGDGQLVIER 60

Query: 61  EVISPTP----PASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           EVISP+P     +S YYSVLNDPSLRSTW HRAWVA GCTTVLIS+AKS+ GAA+S IWL
Sbjct: 61  EVISPSPLTSVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSRIWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSG+YHWGIDNYG A+TPIFGTQIE FQGHHKWPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGIYHWGIDNYGGASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           LYALA+AVTF VLP+S AFDDP LH FV VCSGCIMFSQQFHAWAHGKKS++PPLV+AMQ
Sbjct: 181 LYALARAVTFAVLPVSLAFDDPTLHGFVGVCSGCIMFSQQFHAWAHGKKSEIPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           DAGLLVSR QH+ HH PPYNNNYCIVSGIWN+LLDETKVFEALEMIL+FK G+RPRSWTE
Sbjct: 241 DAGLLVSRTQHATHHRPPYNNNYCIVSGIWNQLLDETKVFEALEMILYFKLGLRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           PNSEWTEET+ILEQT +H
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Sed0028072.1 vs. ExPASy TrEMBL
Match: A0A6J1IGF1 (fatty acid desaturase 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476701 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.9e-147
Identity = 254/318 (79.87%), Postives = 280/318 (88.05%), Query Frame = 0


Query: 1   MSILAQTKFLSSSRMHVNFCSPPVPCKIVYCIANTTVNVASSGATAIQPKKGDGQQLIKR 60
           MSIL Q KFL SS+ HV+  SP VP K V CIANTTVNVA++   A +PK GDGQ +I+R
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EVISPTPP----ASAYYSVLNDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWL 120
           E +SPT P    +S YYSVLNDPSL+STW HR WV SGCT VLIS+AKS+ GAA+SH WL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120

Query: 121 EPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANN 180
           EPA+AALVGYILADLGSGVYHWGIDNYGDA+TPIFGTQIE FQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQ 240
           LYALA+AVTFTVLPI+ A +DPILH FV+VCSGCIMFSQQFHAWAH KKSQLPPLV+AMQ
Sbjct: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTE 300
           DAGLLVSR+QHSAHH PPYNNNYCIVSGIWNKLLDETKVFEALEMILFFK GVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PNSEWTEETKILEQTISH 315
           P+SEWTEET+I+EQT ++
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

[Close]

BLAST of Sed0028072.1 vs. TAIR 10
Match: AT4G27030.1 (fatty acid desaturase A )

HSP 1 Score: 384.4 bits (986), Expect = 8.7e-107
Identity = 178/287 (62.02%), Postives = 222/287 (77.35%), Query Frame = 0


Query: 23  PVPCKIVYCIANTTVNVASSGATAIQPKK--GDGQQLIKREVISPTPPASAYYSVLNDPS 82
           P P +    +   TVN+  S   ++Q  K   + ++L+  + ++ +PP S      NDP+
Sbjct: 39  PQPNREKLLVEQRTVNLPLSNDQSLQSTKPRPNREKLVVEQRLA-SPPLS------NDPT 98

Query: 83  LRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWLEPAIAALVGYILADLGSGVYHWGI 142
           L+STW HR WVA+GCTT+ +S+AKSV G  +SH+ LEPA+A   GYILADLGSGVYHW I
Sbjct: 99  LKSTWTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYHWAI 158

Query: 143 DNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANNLYALAQAVTFTVLPISFAFDDPIL 202
           DNYGD +TP+ GTQIE FQGHHKWPWTIT+RQFANNL+ALAQ +TFTVLP+  AF+DP+ 
Sbjct: 159 DNYGDESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFNDPVF 218

Query: 203 HAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQDAGLLVSRMQHSAHHHPPYNNNYC 262
           H FV   + CI+FSQQFHAWAHG KS+LPPLV+A+QD GLLVSR QH+ HH  PYNNNYC
Sbjct: 219 HGFVCTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNNNYC 278

Query: 263 IVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTEPNSEWTEETKI 308
           IVSG WN +LDE+KVFEALEM+ +F+ GVRPRSW+EPNS+W EET+I
Sbjct: 279 IVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]

BLAST of Sed0028072.1 vs. TAIR 10
Match: AT1G62190.1 (Kua-ubiquitin conjugating enzyme hybrid localisation domain )

HSP 1 Score: 355.1 bits (910), Expect = 5.6e-98
Identity = 160/272 (58.82%), Postives = 203/272 (74.63%), Query Frame = 0


Query: 35  TTVNVASSGATAIQPKKGDGQQLIKREVISPTPPASAYYSVLNDPSLRSTWGHRAWVASG 94
           T V V  S  T   P+      ++++ +++P        S  NDP+L+STW HR WVA+G
Sbjct: 24  TRVRVTCS-VTTTNPQLNHENLVVEKRLVNPP------LSKNNDPTLQSTWTHRLWVAAG 83

Query: 95  CTTVLISVAKSVEGAANSHIWLEPAIAALVGYILADLGSGVYHWGIDNYGDAATPIFGTQ 154
            TT+  S AKS+ G   SH+WL+PA+A   GY+ ADLGSGVYHW IDNYG A+TPI G Q
Sbjct: 84  STTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWAIDNYGGASTPIVGAQ 143

Query: 155 IEGFQGHHKWPWTITKRQFANNLYALAQAVTFTVLPISFAFDDPILHAFVSVCSGCIMFS 214
           +E  QGHHK+PWTITKRQFANN Y +A+A+TF VLP++ A ++P+ H+FVS  + CI+ S
Sbjct: 144 LEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPLFHSFVSTFAFCILLS 203

Query: 215 QQFHAWAHGKKSQLPPLVLAMQDAGLLVSRMQHSAHHHPPYNNNYCIVSGIWNKLLDETK 274
           QQFHAWAHG KS+LPPLV+A+QD GLLVSR  H  HH  PYN+NYC+VSG WNK+LDE+ 
Sbjct: 204 QQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNYCVVSGAWNKVLDESN 263

Query: 275 VFEALEMILFFKFGVRPRSWTEPNSEWTEETK 307
           +F+ALEM LFF+FGVRP SW EPNS+WTEET+
Sbjct: 264 LFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]

BLAST of Sed0028072.1 vs. TAIR 10
Match: AT2G22890.1 (Kua-ubiquitin conjugating enzyme hybrid localisation domain )

HSP 1 Score: 336.7 bits (862), Expect = 2.1e-92
Identity = 145/224 (64.73%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 77  NDPSLRSTWGHRAWVASGCTTVLISVAKSVEGAANSHIWLEPAIAALVGYILADLGSGVY 136
           NDP+L+STW HR WVA+GCTTV +S +KS+ GA  SH+WLEP++A   GYILADLGSGVY
Sbjct: 56  NDPTLQSTWTHRLWVAAGCTTVFVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVY 115

Query: 137 HWGIDNYGDAATPIFGTQIEGFQGHHKWPWTITKRQFANNLYALAQAVTFTVLPISFAFD 196
           HW  DNYGD +TP+ G  IE  Q HHK PWTITKRQFANNL+ +A+  T  VLP+  AFD
Sbjct: 116 HWATDNYGDESTPLVGIHIEDSQDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFD 175

Query: 197 DPILHAFVSVCSGCIMFSQQFHAWAHGKKSQLPPLVLAMQDAGLLVSRMQHSAHHHPPYN 256
           D ++H FVS+ + C++F Q FHAWAHG KS+LPPLV+ +QD GLLVSR+ H  HH  PYN
Sbjct: 176 DHVVHGFVSMFAFCVLFCQLFHAWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYN 235

Query: 257 NNYCIVSGIWNKLLDETKVFEALEMILFFKFGVRPRSWTEPNSE 301
           NNYC+VSG+WNK+LDE+ VF+A+EM+L+ + GVRPRSWTEPN E
Sbjct: 236 NNYCVVSGVWNKVLDESNVFKAMEMVLYIQLGVRPRSWTEPNYE 279

The following BLAST results are available for this feature:

BLAST of Sed0028072.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905900.1	2.0e-153	82.39	fatty acid desaturase 4, chloroplastic-like [Benincasa hispida]	[more]
XP_004152938.1	1.3e-149	80.82	fatty acid desaturase 4, chloroplastic [Cucumis sativus] >KGN56137.1 hypothetica...	[more]
XP_022150986.1	1.5e-148	82.17	fatty acid desaturase 4, chloroplastic [Momordica charantia]	[more]
KAA0033959.1	7.3e-148	80.19	fatty acid desaturase 4 [Cucumis melo var. makuwa] >TYK02585.1 fatty acid desatu...	[more]
XP_008463431.1	1.6e-147	79.56	PREDICTED: fatty acid desaturase 4, chloroplastic [Cucumis melo]	[more]

BLAST of Sed0028072.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ42	1.2e-105	62.02	Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4 P...	[more]
O04584	7.9e-97	58.82	Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O81006	2.9e-91	64.73	Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9AE87	3.1e-16	33.15	Plasmanylethanolamine desaturase OS=Myxococcus xanthus OX=34 GN=carF PE=1 SV=1	[more]
Q5UR78	2.1e-12	27.93	Probable fatty acid desaturase MIMI_L630 OS=Acanthamoeba polyphaga mimivirus OX=...	[more]

BLAST of Sed0028072.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6B9	6.4e-150	80.82	TMEM189_B_dmain domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G07...	[more]
A0A6J1DD70	7.1e-149	82.17	fatty acid desaturase 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5A7SXQ7	3.5e-148	80.19	Fatty acid desaturase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CJN9	7.8e-148	79.56	fatty acid desaturase 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501595 P...	[more]
A0A6J1IGF1	3.9e-147	79.87	fatty acid desaturase 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114767...	[more]

BLAST of Sed0028072.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27030.1	8.7e-107	62.02	fatty acid desaturase A	[more]
AT1G62190.1	5.6e-98	58.82	Kua-ubiquitin conjugating enzyme hybrid localisation domain	[more]
AT2G22890.1	2.1e-92	64.73	Kua-ubiquitin conjugating enzyme hybrid localisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019547	B domain of TMEM189, localisation domain	PFAM	PF10520	TMEM189_B_dmain	coord: 126..294 e-value: 6.9E-64 score: 215.1
None	No IPR available	PANTHER	PTHR48140	FAMILY NOT NAMED	coord: 1..308

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0028072	Sed0028072	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028072.1-cds	Sed0028072.1-cds-LG13:15511559..15512503	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028072.1-exon	Sed0028072.1-exon-LG13:15511559..15512503	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0028072.1	Sed0028072.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006631	fatty acid metabolic process
cellular_component	GO:0016021	integral component of membrane