Sed0025887.2 (mRNA) Chayote v1

Overview


Name	Sed0025887.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	SNF1-related protein kinase regulatory subunit beta-1
Location	LG08: 9865636 .. 9869869 (+)
Sequence length	3308
RNA-Seq Expression	Sed0025887.2
Synteny	Sed0025887.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATCTACAAAAGTCAACAATGCAGTTGACTTAAGAGCGGTGGAAGTGGTGGCCGGCGGTGCAAACGGCGGCGTCAGAGTGGCAAATAGCATAAATAAAGCAAACCCAGAGGGCATTTTGGGTCATAATGTAAAATCTAGAGAGAGAAACTCGTCTTTCTCTCTCTCATCTCAGCTGCAGCTGAATTTCTCGTGGGGGCAATTTATCTATATTTCTTAATCTCCATTTGTCTTCTTCATCTTCTTCCCTAAATCAACGAACACACACACAAGAATTCCAAATTAGGGATTTGGATTGAGAATCTAAATCTCCATCCAATTGGTCCTCGTTTGTTCCAGTAATTTTGAATGTTGATTGCGATTCGATCCTCCGTCAGGTGGAAATCCGCGACTCGTTTCGGTTCTTAGGTCCGATGGGTAATGCCAATGGTCGAGAAGAGAGTTCTTCCGCCGCCGATGGACAAGGTTCGGTGATTGACACTTCCTTGGCTACTGAATCGACTAACGTTACTTCTTCAGATTCGATGGCAAATACTACTCCTCCTGGCAGCACTGCCAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGGTCACTATTTCCTTCTTCTTCCTCCTCCTGTCCTGTTCCTTCTTGTTCGTGGGGTTTGAATCGTTTTTTTTTTAATTGGGTTTTGATTGTTAAGTGGAAGTTTGTGTTACTCGGGAAGTTTCTTTATGAAGATCGCTGTATTGTAACAGTCGTGAACGGGGAAGTTCCACCCAACATTTACTTTGTTGACTACTTGGACTAAGATTATCTTCCTGCAATTTTTAGTGATGTTGAGTGTTTTTATTTTTTTTGTTCTTACTTTGGATCACTGCTCAATGTTGTGCTCTTCAGAAATTAATGGCTGAACTGTCTGTTGTGGGATTTGCCTAATCCGATCAGCTATAGTTTGATATGAGTAGCTGGGGTTACTCTTTTGATTCTGATCCCCTTCAAACTATGTATTAATTTGTAGCAATATCTCAATCGACATAGCTGTGTGCCCATGATCAAGAGGTTATGGGTTACAAATCTCCCACCCCAATAGTTGTTGAGCTCAAAAAGAATTTGTTAGAGTTGGTTGCTTGATGGAATCAAGTATGTCATGCAGCAGAATATTACTTCTGTTTTCATAAAAGCATTGATATTGTATTTACTGGAACTGGGTTTAGTGAGGGATGCGTTGTGTCGTTTAAACTTCCCGTTCCTGATTTGATCTCACAATTGTGTTTATGAACTGTGGCAAATATCTTAGTTAAATCATAAGTTGGACTTGCTTTTTGAGATGACCCAAATTTGAATTTGTAGGATCATTAGCCTTGGTTATGGCTTTTGTAATGAAAATCATGGTGAGTATGTATTACAAGACTTGCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTACGAGTCCAACCGTTTACAATGAAGCATGGCCGAACGATATCCATGGAGCTGGAGATAACCCTCCAGAGCAAGGAGTCCCAACAGTCATAACGTGGAGCTACGGTGGCAGCAGCGTGGCTGTTGAGGGGTCATGGGACAACTGGGAATCCAGGTTATTTCTTATCAATTCCAGGCTATCATAATTCTTTCAAGCTTCAGGCTTCATGAAACTAGTTCTACTGCATTTTGCATAAATAATGAAATATTATGCTACACTGCTTCTGCAGGAAGAGCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTTTGGTCCTTTCATCTGGAATATATCATTACAAGTTCATGGTCGATGGTCAACAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAAATGGGAAATGTCTTTAATCTCCTTGATGTTTCTGTAAGTGTGATTCTTCCCTTCATCTCCATGTCGTCCAGTCGACATGAACTTGAATTTGACTCGTTATTTGTGTTGAAAAATGATGTATTTAGTTTTTGAAAATGAAAATTACCAATTGTACAAAAATACTTGCTTGATTTCATGTAGGCATACAGCATACTAGTAGGATAAATATCTGAAAAGCAAGGCTGTGAGGTTTATAATTGCAACCTTAGTAATGTTTAATAAATGGTGAACTAATAGTAATGGATGATTATTTACACATTGCACCAGCACATTATTGGTCTTGACTCTTTACTCATCTGTTGGATATAGATATTGCTGTTAAGTTACGTAGAAAGTAGAAACTCGGATGGAAAAACAGGCTTACTGGACTGTTTTGACTGGTCGGAATGATGCCATGCCATTATTTTTACTTCTCTTGCACACCAACTCGATTAACATAAGTTGTTTCATATATACACATAAGAAACGTGATTAACCCAAGTACTTGAAAGTTTTGTTTTAATCCTCTATATATAGATGCTTGGGGTACGATTCAGAAAATATTTTCTATATCATACCATGAATATTTCACTCTACAGAGAACTGCCCTCATAACCTTCTGGTTTTGTGTGGGTTCTTGATTTTATCATTTTTTGGGGTGAGAACGAGAAATATCGACATGTTGATTAGAAAATTATAGTTCAAAACTGCAAGATGCCCAGATAACGGATTGTACAAGCTATCCTGTCCATTCTTCTGCGCAATGAAGTACATTCATTCTGCTTGCAAAGAGCACAATATCATATATTTCATGTATTTTCTTGCTTGTCAGAAGTGTTCACATTTTGGTAAACAATAGTTTTTTTCCAAGTGTTCTCAAGCAATACAGGGGAAGAGACACGAAAATATATGCACTAGACTAGAATAGTTGTATACCCAAGTACCCAACCTAAATGCTAGTATTTGAGCTACTAAAGAAAAGTGCACACACCCCCATCATATAAAGCATGCAGATCATAGAATTCTGATTGGATAGGATAGGTATAGGTGGTTTTAGGCTCTTCTTTCGTATATATTTGTTCTCCAAGTTCACATTCTCACCATCAGCCCATCTTGATAACTTCTCTGGAATAAAAGCAAAATCATATATTTTTCGCATCACATTTTGCTGTATGCGGCACACCCCCAGTGACCGAGTTTCATACACGACAGAGAAATGGAACAAAAAGGAATAGCAAATTGATGAAGGGTAGTTTTGTCCGAAGATAATTGTTGCAAGGGCCAAGGAGGGACATGTGGCAGAGGATTGTGGGCCACAAAGAGTTCATTCGACTGAAAGTCATTTCATATTTGTTTTGTGATTGCATTTTTTTTTTATCTGTTTTATGCTTTTTTTCTCAACAAGGGTAACAACGCCCGTCCCTAGGTCAAGCACCAGAGACATCGAAAGAGTAATTTCACAGGTGAGTTTCGAACCTCGGACCTTGAGGGGAGCTTATCTTCAAGTCCAAGTCTTCAACTGCGTCACCCCTTCGTGACTTATTTGTTTTATGCTTGCTGTATGAACAAGTCTCTCAGAGAGAATTGAGTAGGAATTTCTAAATAAAATTGGTAGCGAGTTCTATCAATTTTAGGCATATTATTTGTATCTTGCTAACTATTGAATGCACATTGAGAAAATTATTTTAGAAAGAGATGTGGAACTTCATTCAGTTATTGAAATGCAAGGACTAACTGATCGTATAATCCATCTTCAGCTTTCATCTTGGAGTTGTCTCTGTTTTGTAGGATTATGTGCCTGATATTTTACAGAGCGTGGCTGAGTTCGAGGCTCCATCATCACCAGAGACGAGTTACAGCCAGGCATTCCCTGGCGAGGAAGACTTCACCAAGGAGCCAGCAGCCGTGCCATCACAGCTGCACCTCACGGTTCTAGGAATGGAGAATCCCGACGAAGCTTCATCCTCAAAGCCACAGCATGTTGTGCTTAACCATCTTTTCATGGAGAAAGGATGGGCATCTCAATCTGTGGTTGCACTGGGGCTTACTCATAGGTTTCATTCGAAGTATGTCACGGTCGTCCTCTACAAACCGCCGAACAGGTAGTTATTTAGTTCGTCTTCCCACGTGTAATCTGATGGTTTAGTTGTCGACTTTTCGCACTGAACTTTGTAGAGTATCACGAGCTACTGCACCCTGCATCGTCTGTGGAGGAGTCTTGTTTTTATAGAACTGGTTAGCCAAAGTTGGCTTGCAACAAAACACTCTTAATTCTGATCAATATTTCTTCAACATATGAAGAAATCTGTGTTTTTATAGAACTGCTTGGCCAAAAAAGCTTAATTGCCTCTTCTCTAACTGCATCAATATAGTAGATTTGATCTGAGGGGA

mRNA sequence

GGAATCTACAAAAGTCAACAATGCAGTTGACTTAAGAGCGGTGGAAGTGGTGGCCGGCGGTGCAAACGGCGGCGTCAGAGTGGCAAATAGCATAAATAAAGCAAACCCAGAGGGCATTTTGGGTCATAATGTAAAATCTAGAGAGAGAAACTCGTCTTTCTCTCTCTCATCTCAGCTGCAGCTGAATTTCTCGTGGGGGCAATTTATCTATATTTCTTAATCTCCATTTGTCTTCTTCATCTTCTTCCCTAAATCAACGAACACACACACAAGAATTCCAAATTAGGGATTTGGATTGAGAATCTAAATCTCCATCCAATTGGTCCTCGTTTGTTCCAGTAATTTTGAATGTTGATTGCGATTCGATCCTCCGTCAGGTGGAAATCCGCGACTCGTTTCGGTTCTTAGGTCCGATGGGTAATGCCAATGGTCGAGAAGAGAGTTCTTCCGCCGCCGATGGACAAGGTTCGGTGATTGACACTTCCTTGGCTACTGAATCGACTAACGTTACTTCTTCAGATTCGATGGCAAATACTACTCCTCCTGGCAGCACTGCCAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTACGAGTCCAACCGTTTACAATGAAGCATGGCCGAACGATATCCATGGAGCTGGAGATAACCCTCCAGAGCAAGGAGTCCCAACAGTCATAACGTGGAGCTACGGTGGCAGCAGCGTGGCTGTTGAGGGGTCATGGGACAACTGGGAATCCAGGAAGAGCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTTTGGTCCTTTCATCTGGAATATATCATTACAAGTTCATGGTCGATGGTCAACAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAAATGGGAAATGTCTTTAATCTCCTTGATGTTTCTGTAAGTGTGATTCTTCCCTTCATCTCCATGTCGTCCAGTCGACATGAACTTGAATTTGACTCGTTATTTGTGTTGAAAAATGATGTATTTAGTTTTTGAAAATGAAAATTACCAATTGTACAAAAATACTTGCTTGATTTCATGTAGGCATACAGCATACTAGTAGGATAAATATCTGAAAAGCAAGGCTGTGAGGTTTATAATTGCAACCTTAGTAATGTTTAATAAATGGTGAACTAATAGTAATGGATGATTATTTACACATTGCACCAGCACATTATTGGTCTTGACTCTTTACTCATCTGTTGGATATAGATATTGCTGTTAAGTTACGTAGAAAGTAGAAACTCGGATGGAAAAACAGGCTTACTGGACTGTTTTGACTGGTCGGAATGATGCCATGCCATTATTTTTACTTCTCTTGCACACCAACTCGATTAACATAAGTTGTTTCATATATACACATAAGAAACGTGATTAACCCAAGTACTTGAAAGTTTTGTTTTAATCCTCTATATATAGATGCTTGGGGTACGATTCAGAAAATATTTTCTATATCATACCATGAATATTTCACTCTACAGAGAACTGCCCTCATAACCTTCTGGTTTTGTGTGGGTTCTTGATTTTATCATTTTTTGGGGTGAGAACGAGAAATATCGACATGTTGATTAGAAAATTATAGTTCAAAACTGCAAGATGCCCAGATAACGGATTGTACAAGCTATCCTGTCCATTCTTCTGCGCAATGAAGTACATTCATTCTGCTTGCAAAGAGCACAATATCATATATTTCATGTATTTTCTTGCTTGTCAGAAGTGTTCACATTTTGGTAAACAATAGTTTTTTTCCAAGTGTTCTCAAGCAATACAGGGGAAGAGACACGAAAATATATGCACTAGACTAGAATAGTTGTATACCCAAGTACCCAACCTAAATGCTAGTATTTGAGCTACTAAAGAAAAGTGCACACACCCCCATCATATAAAGCATGCAGATCATAGAATTCTGATTGGATAGGATAGGTATAGGTGGTTTTAGGCTCTTCTTTCGTATATATTTGTTCTCCAAGTTCACATTCTCACCATCAGCCCATCTTGATAACTTCTCTGGAATAAAAGCAAAATCATATATTTTTCGCATCACATTTTGCTGTATGCGGCACACCCCCAGTGACCGAGTTTCATACACGACAGAGAAATGGAACAAAAAGGAATAGCAAATTGATGAAGGGTAGTTTTGTCCGAAGATAATTGTTGCAAGGGCCAAGGAGGGACATGTGGCAGAGGATTGTGGGCCACAAAGAGTTCATTCGACTGAAAGTCATTTCATATTTGTTTTGTGATTGCATTTTTTTTTTATCTGTTTTATGCTTTTTTTCTCAACAAGGGTAACAACGCCCGTCCCTAGGTCAAGCACCAGAGACATCGAAAGAGTAATTTCACAGGTGAGTTTCGAACCTCGGACCTTGAGGGGAGCTTATCTTCAAGTCCAAGTCTTCAACTGCGTCACCCCTTCGTGACTTATTTGTTTTATGCTTGCTGTATGAACAAGTCTCTCAGAGAGAATTGAGTAGGAATTTCTAAATAAAATTGGTAGCGAGTTCTATCAATTTTAGGCATATTATTTGTATCTTGCTAACTATTGAATGCACATTGAGAAAATTATTTTAGAAAGAGATGTGGAACTTCATTCAGTTATTGAAATGCAAGGACTAACTGATCGTATAATCCATCTTCAGCTTTCATCTTGGAGTTGTCTCTGTTTTGTAGGATTATGTGCCTGATATTTTACAGAGCGTGGCTGAGTTCGAGGCTCCATCATCACCAGAGACGAGTTACAGCCAGGCATTCCCTGGCGAGGAAGACTTCACCAAGGAGCCAGCAGCCGTGCCATCACAGCTGCACCTCACGGTTCTAGGAATGGAGAATCCCGACGAAGCTTCATCCTCAAAGCCACAGCATGTTGTGCTTAACCATCTTTTCATGGAGAAAGGATGGGCATCTCAATCTGTGGTTGCACTGGGGCTTACTCATAGGTTTCATTCGAAGTATGTCACGGTCGTCCTCTACAAACCGCCGAACAGGTAGTTATTTAGTTCGTCTTCCCACGTGTAATCTGATGGTTTAGTTGTCGACTTTTCGCACTGAACTTTGTAGAGTATCACGAGCTACTGCACCCTGCATCGTCTGTGGAGGAGTCTTGTTTTTATAGAACTGGTTAGCCAAAGTTGGCTTGCAACAAAACACTCTTAATTCTGATCAATATTTCTTCAACATATGAAGAAATCTGTGTTTTTATAGAACTGCTTGGCCAAAAAAGCTTAATTGCCTCTTCTCTAACTGCATCAATATAGTAGATTTGATCTGAGGGGA

Coding sequence (CDS)

ATGGGTAATGCCAATGGTCGAGAAGAGAGTTCTTCCGCCGCCGATGGACAAGGTTCGGTGATTGACACTTCCTTGGCTACTGAATCGACTAACGTTACTTCTTCAGATTCGATGGCAAATACTACTCCTCCTGGCAGCACTGCCAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTACGAGTCCAACCGTTTACAATGAAGCATGGCCGAACGATATCCATGGAGCTGGAGATAACCCTCCAGAGCAAGGAGTCCCAACAGTCATAACGTGGAGCTACGGTGGCAGCAGCGTGGCTGTTGAGGGGTCATGGGACAACTGGGAATCCAGGAAGAGCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTTTGGTCCTTTCATCTGGAATATATCATTACAAGTTCATGGTCGATGGTCAACAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAAATGGGAAATGTCTTTAATCTCCTTGATGTTTCTGTAAGTGTGATTCTTCCCTTCATCTCCATGTCGTCCAGTCGACATGAACTTGAATTTGACTCGTTATTTGTGTTGAAAAATGATGTATTTAGTTTTTGA

Protein sequence

MGNANGREESSSAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSVSVILPFISMSSSRHELEFDSLFVLKNDVFSF

Homology

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BLAST of Sed0025887.2 vs. NCBI nr
Match: XP_022933563.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 281.6 bits (719), Expect = 5.5e-72
Identity = 142/183 (77.60%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQGSVID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGSVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 176
           WDNW SRK+LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. NCBI nr
Match: XP_023531782.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 9.4e-72
Identity = 142/183 (77.60%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQG VID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGPVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 176
           WDNW SRKSLQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKSLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. NCBI nr
Match: KAG6588137.1 (SNF1-related protein kinase regulatory subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-71
Identity = 141/183 (77.05%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQG VID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGPVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 176
           WDNW SRK+LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. NCBI nr
Match: XP_022967978.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-68
Identity = 137/183 (74.86%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + A GQG VI +SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADAGGQGPVIGSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGG SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGGSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 176
           WDNW SRK LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLP+IADEMGNVFNLL+V
Sbjct: 121 WDNWASRKILQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPHIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. NCBI nr
Match: XP_022147666.1 (SNF1-related protein kinase regulatory subunit beta-1 [Momordica charantia])

HSP 1 Score: 265.4 bits (677), Expect = 4.1e-67
Identity = 134/185 (72.43%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 1   MGNANGREESSSA--------ADGQGS-VIDTSLATESTNVTSSDSMANTTPPGSTANLR 60
           MGNANGREE+SSA        ADG G  V D  +  E++NV SSDSM N TPPGS  N R
Sbjct: 1   MGNANGREETSSAGGGGSIVDADGHGGPVTDNPVPAETSNVVSSDSMGN-TPPGSPGNFR 60

Query: 61  SPILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEG 120
           SPILF+PQVPVAPL+GG  PT YNEAW N+ HG  DNPPEQG+PT+ITWSYGG +VAVEG
Sbjct: 61  SPILFSPQVPVAPLRGGNGPTTYNEAWQNEFHGVEDNPPEQGIPTIITWSYGGINVAVEG 120

Query: 121 SWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLD 177
           SWDNW SRK+LQR+GKDFSI++VL SG+YHYKF+VDGQQRYIPDLP+IADEMGNVFNLL+
Sbjct: 121 SWDNWASRKTLQRSGKDFSIVMVLPSGVYHYKFIVDGQQRYIPDLPFIADEMGNVFNLLN 180

[Close]

BLAST of Sed0025887.2 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.9e-49
Identity = 102/180 (56.67%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVIDTSLATESTNVT--------SSDSMANTTPPGSTANLRS 60
           MGNANG++E ++A  G   V  +S  +   + +        SSDSM +++PPGS A   S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSM-SSSPPGSPARSPS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           P LFAPQVPVAPLQ   +P   N  W N      DNPPEQG+PT+ITW+ GG+ VAVEGS
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 173
           WDNW SRK LQ++GKD SIL VL SGIYHYK +VDG+ +YIPDLP++ADE+GNV N+LDV
Sbjct: 121 WDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDV 178

[Close]

BLAST of Sed0025887.2 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.7e-36
Identity = 81/182 (44.51%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 1   MGNANGREE----SSSAADGQGSVI---DTSLATESTNVTSSDSMANTTPPGSTANLRSP 60
           MGN N REE    ++SA + + + I   +   A    N  +   +   +PP S    +SP
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPHSPRATQSP 60

Query: 61  ILFAPQVPVAPLQGGTSPTVYNEAW---PNDIHGAGDNPPEQGVPTVITWSYGGSSVAVE 120
           ++FAPQVPV PLQ      + N +W   P+ ++    N  EQG+PT+ITW +GG  +AVE
Sbjct: 61  LMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASN--EQGIPTMITWCHGGKEIAVE 120

Query: 121 GSWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLL 173
           GSWDNW++R  LQR+GKDF+I+ VL SG+Y Y+F+VDGQ R+ P+LP   D+ GN FN+L
Sbjct: 121 GSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNIL 180

[Close]

BLAST of Sed0025887.2 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-13
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 77  AWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLS 136
           +W  D+  +   P +Q  PTVI WS GG  V + GS++NW ++  L ++  DF  +L L 
Sbjct: 61  SWQQDLEDS-VKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLP 120

Query: 137 SGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSVS 176
            G + YKF VDGQ  + P  P +  ++G + NL+ V  S
Sbjct: 121 EGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKS 158

[Close]

BLAST of Sed0025887.2 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-13
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 78  WPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSS 137
           W  D+  +   P +Q  PTVI WS GG  V + GS++NW ++  L ++  DF  +L L  
Sbjct: 61  WQQDLDDS-VKPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 138 GIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSVS 176
           G + YKF VDGQ  + P  P +  ++G + NL+ V  S
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKS 157

[Close]

BLAST of Sed0025887.2 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-13
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 78  WPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSS 137
           W  D+  +   P +Q  PTVI WS GG  V + GS++NW ++  L ++  DF  +L L  
Sbjct: 61  WQQDLDDS-VKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 138 GIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSVS 176
           G + YKF VDGQ  + P  P +  ++G + NL+ V  S
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKS 157

[Close]

BLAST of Sed0025887.2 vs. ExPASy TrEMBL
Match: A0A6J1F546 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440954 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.7e-72
Identity = 142/183 (77.60%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQGSVID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGSVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 176
           WDNW SRK+LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. ExPASy TrEMBL
Match: A0A6J1HWQ6 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467354 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68
Identity = 137/183 (74.86%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + A GQG VI +SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADAGGQGPVIGSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGG SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGGSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 176
           WDNW SRK LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLP+IADEMGNVFNLL+V
Sbjct: 121 WDNWASRKILQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPHIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. ExPASy TrEMBL
Match: A0A6J1D322 (SNF1-related protein kinase regulatory subunit beta-1 OS=Momordica charantia OX=3673 GN=LOC111016534 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-67
Identity = 134/185 (72.43%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 1   MGNANGREESSSA--------ADGQGS-VIDTSLATESTNVTSSDSMANTTPPGSTANLR 60
           MGNANGREE+SSA        ADG G  V D  +  E++NV SSDSM N TPPGS  N R
Sbjct: 1   MGNANGREETSSAGGGGSIVDADGHGGPVTDNPVPAETSNVVSSDSMGN-TPPGSPGNFR 60

Query: 61  SPILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEG 120
           SPILF+PQVPVAPL+GG  PT YNEAW N+ HG  DNPPEQG+PT+ITWSYGG +VAVEG
Sbjct: 61  SPILFSPQVPVAPLRGGNGPTTYNEAWQNEFHGVEDNPPEQGIPTIITWSYGGINVAVEG 120

Query: 121 SWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLD 177
           SWDNW SRK+LQR+GKDFSI++VL SG+YHYKF+VDGQQRYIPDLP+IADEMGNVFNLL+
Sbjct: 121 SWDNWASRKTLQRSGKDFSIVMVLPSGVYHYKFIVDGQQRYIPDLPFIADEMGNVFNLLN 180

[Close]

BLAST of Sed0025887.2 vs. ExPASy TrEMBL
Match: A0A5D3CDJ6 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00700 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.1e-63
Identity = 127/184 (69.02%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVID--------TSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGRE+S+  A   G   D        +S+ +E++NV SSDSM N TPP S    RS
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGN-TPPHSPGKFRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQ+PVAPLQGG  PT YN AW N+  GA D+PPEQG+PT+ITWSYGGS+VAVEGS
Sbjct: 61  PILFAPQIPVAPLQGGNGPTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 177
           WDNW SRK+LQRTGKDFS+L+VL SG+YHYKF+VDGQ+RYIPDLP+IADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. ExPASy TrEMBL
Match: A0A1S3BQK7 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo OX=3656 GN=LOC103492444 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.1e-63
Identity = 127/184 (69.02%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVID--------TSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGRE+S+  A   G   D        +S+ +E++NV SSDSM N TPP S    RS
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGN-TPPHSPGKFRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQ+PVAPLQGG  PT YN AW N+  GA D+PPEQG+PT+ITWSYGGS+VAVEGS
Sbjct: 61  PILFAPQIPVAPLQGGNGPTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 177
           WDNW SRK+LQRTGKDFS+L+VL SG+YHYKF+VDGQ+RYIPDLP+IADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNV 180

[Close]

BLAST of Sed0025887.2 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 194.9 bits (494), Expect = 6.4e-50
Identity = 102/180 (56.67%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVIDTSLATESTNVT--------SSDSMANTTPPGSTANLRS 60
           MGNANG++E ++A  G   V  +S  +   + +        SSDSM +++PPGS A   S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSM-SSSPPGSPARSPS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           P LFAPQVPVAPLQ   +P   N  W N      DNPPEQG+PT+ITW+ GG+ VAVEGS
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 173
           WDNW SRK LQ++GKD SIL VL SGIYHYK +VDG+ +YIPDLP++ADE+GNV N+LDV
Sbjct: 121 WDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDV 178

[Close]

BLAST of Sed0025887.2 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.3e-44
Identity = 102/217 (47.00%), Postives = 127/217 (58.53%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVIDTSLATESTNVT--------SSDSMANTTPPGSTANLRS 60
           MGNANG++E ++A  G   V  +S  +   + +        SSDSM +++PPGS A   S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSM-SSSPPGSPARSPS 60

Query: 61  PILFAPQ-------------------------------------VPVAPLQGGTSPTVYN 120
           P LFAPQ                                     VPVAPLQ   +P   N
Sbjct: 61  PFLFAPQPTLLFHVTSYNICSPMRHLFHCLGLTCVPNGCISCRMVPVAPLQRANAPPPNN 120

Query: 121 EAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVL 173
             W N      DNPPEQG+PT+ITW+ GG+ VAVEGSWDNW SRK LQ++GKD SIL VL
Sbjct: 121 IQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVL 180

[Close]

BLAST of Sed0025887.2 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.2e-36
Identity = 73/152 (48.03%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 24  SLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAW---PN 83
           S A++  +V   + M   +PP S    +SP++FAPQVPV PLQ      + N +W   P+
Sbjct: 2   SAASDGNHVAPPELMGQ-SPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPS 61

Query: 84  DIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIY 143
            ++    N  EQG+PT+ITW +GG  +AVEGSWDNW++R  LQR+GKDF+I+ VL SG+Y
Sbjct: 62  SLYEEASN--EQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVY 121

Query: 144 HYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 173
            Y+F+VDGQ R+ P+LP   D+ GN FN+LD+
Sbjct: 122 EYRFIVDGQWRHAPELPLARDDAGNTFNILDL 150

[Close]

BLAST of Sed0025887.2 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.2e-36
Identity = 73/152 (48.03%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 24  SLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAW---PN 83
           S A++  +V   + M   +PP S    +SP++FAPQVPV PLQ      + N +W   P+
Sbjct: 4   SAASDGNHVAPPELMGQ-SPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPS 63

Query: 84  DIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIY 143
            ++    N  EQG+PT+ITW +GG  +AVEGSWDNW++R  LQR+GKDF+I+ VL SG+Y
Sbjct: 64  SLYEEASN--EQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVY 123

Query: 144 HYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 173
            Y+F+VDGQ R+ P+LP   D+ GN FN+LD+
Sbjct: 124 EYRFIVDGQWRHAPELPLARDDAGNTFNILDL 152

[Close]

BLAST of Sed0025887.2 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.9e-34
Identity = 72/152 (47.37%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 24  SLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAW---PN 83
           S A++  +V   + M   +PP S    +SP++FAPQVPV PLQ      + N +W   P+
Sbjct: 2   SAASDGNHVAPPELMGQ-SPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPS 61

Query: 84  DIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIY 143
            ++    N  EQG+PT+ITW +GG  +AVEGSWDNW++ + LQR+GKDF+I+ VL SG+Y
Sbjct: 62  SLYEEASN--EQGIPTMITWCHGGKEIAVEGSWDNWKTSR-LQRSGKDFTIMKVLPSGVY 121

Query: 144 HYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 173
            Y+F+VDGQ R+ P+LP   D+ GN FN+LD+
Sbjct: 122 EYRFIVDGQWRHAPELPLARDDAGNTFNILDL 149

The following BLAST results are available for this feature:

BLAST of Sed0025887.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933563.1	5.5e-72	77.60	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita mosc...	[more]
XP_023531782.1	9.4e-72	77.60	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo...	[more]
KAG6588137.1	2.1e-71	77.05	SNF1-related protein kinase regulatory subunit beta-1, partial [Cucurbita argyro...	[more]
XP_022967978.1	2.2e-68	74.86	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxi...	[more]
XP_022147666.1	4.1e-67	72.43	SNF1-related protein kinase regulatory subunit beta-1 [Momordica charantia]	[more]

BLAST of Sed0025887.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84VQ1	8.9e-49	56.67	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
Q9SCY5	8.7e-36	44.51	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
O43741	2.1e-13	37.37	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q6PAM0	3.5e-13	37.76	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
Q9QZH4	3.5e-13	37.76	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Sed0025887.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F546	2.7e-72	77.60	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1HWQ6	1.1e-68	74.86	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1D322	2.0e-67	72.43	SNF1-related protein kinase regulatory subunit beta-1 OS=Momordica charantia OX=...	[more]
A0A5D3CDJ6	5.1e-63	69.02	SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuw...	[more]
A0A1S3BQK7	5.1e-63	69.02	SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Sed0025887.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21170.1	6.4e-50	56.67	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	2.3e-44	47.00	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.1	5.2e-36	48.03	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	5.2e-36	48.03	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	2.9e-34	47.37	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 94..173 e-value: 2.1E-29 score: 101.5
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 87..176 e-value: 2.8E-22 score: 80.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 95..172 e-value: 1.79707E-24 score: 89.9656
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..175
IPR037170	SNF1-related protein kinase regulatory subunit beta-1	PANTHER	PTHR46316:SF9	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..175
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 92..172

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0025887	Sed0025887	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025887.2-five_prime_utr	Sed0025887.2-five_prime_utr-LG08:9865636..9866048	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025887.2-exon	Sed0025887.2-exon-LG08:9865636..9866225	exon
Sed0025887.2-exon	Sed0025887.2-exon-LG08:9867037..9867215	exon
Sed0025887.2-exon	Sed0025887.2-exon-LG08:9867331..9869869	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025887.2-cds	Sed0025887.2-cds-LG08:9866049..9866225	CDS
Sed0025887.2-cds	Sed0025887.2-cds-LG08:9867037..9867215	CDS
Sed0025887.2-cds	Sed0025887.2-cds-LG08:9867331..9867592	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025887.2-three_prime_utr	Sed0025887.2-three_prime_utr-LG08:9867593..9869869	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0025887.2	Sed0025887.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043562	cellular response to nitrogen levels
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031588	nucleotide-activated protein kinase complex
molecular_function	GO:1901982	maltose binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0019887	protein kinase regulator activity