Sed0025887 (gene) Chayote v1

Overview


Name	Sed0025887
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SNF1-related protein kinase regulatory subunit beta-1
Location	LG08: 9865636 .. 9869869 (+)
RNA-Seq Expression	Sed0025887
Synteny	Sed0025887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATCTACAAAAGTCAACAATGCAGTTGACTTAAGAGCGGTGGAAGTGGTGGCCGGCGGTGCAAACGGCGGCGTCAGAGTGGCAAATAGCATAAATAAAGCAAACCCAGAGGGCATTTTGGGTCATAATGTAAAATCTAGAGAGAGAAACTCGTCTTTCTCTCTCTCATCTCAGCTGCAGCTGAATTTCTCGTGGGGGCAATTTATCTATATTTCTTAATCTCCATTTGTCTTCTTCATCTTCTTCCCTAAATCAACGAACACACACACAAGAATTCCAAATTAGGGATTTGGATTGAGAATCTAAATCTCCATCCAATTGGTCCTCGTTTGTTCCAGTAATTTTGAATGTTGATTGCGATTCGATCCTCCGTCAGGTGGAAATCCGCGACTCGTTTCGGTTCTTAGGTCCGATGGGTAATGCCAATGGTCGAGAAGAGAGTTCTTCCGCCGCCGATGGACAAGGTTCGGTGATTGACACTTCCTTGGCTACTGAATCGACTAACGTTACTTCTTCAGATTCGATGGCAAATACTACTCCTCCTGGCAGCACTGCCAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGGTCACTATTTCCTTCTTCTTCCTCCTCCTGTCCTGTTCCTTCTTGTTCGTGGGGTTTGAATCGTTTTTTTTTTAATTGGGTTTTGATTGTTAAGTGGAAGTTTGTGTTACTCGGGAAGTTTCTTTATGAAGATCGCTGTATTGTAACAGTCGTGAACGGGGAAGTTCCACCCAACATTTACTTTGTTGACTACTTGGACTAAGATTATCTTCCTGCAATTTTTAGTGATGTTGAGTGTTTTTATTTTTTTTGTTCTTACTTTGGATCACTGCTCAATGTTGTGCTCTTCAGAAATTAATGGCTGAACTGTCTGTTGTGGGATTTGCCTAATCCGATCAGCTATAGTTTGATATGAGTAGCTGGGGTTACTCTTTTGATTCTGATCCCCTTCAAACTATGTATTAATTTGTAGCAATATCTCAATCGACATAGCTGTGTGCCCATGATCAAGAGGTTATGGGTTACAAATCTCCCACCCCAATAGTTGTTGAGCTCAAAAAGAATTTGTTAGAGTTGGTTGCTTGATGGAATCAAGTATGTCATGCAGCAGAATATTACTTCTGTTTTCATAAAAGCATTGATATTGTATTTACTGGAACTGGGTTTAGTGAGGGATGCGTTGTGTCGTTTAAACTTCCCGTTCCTGATTTGATCTCACAATTGTGTTTATGAACTGTGGCAAATATCTTAGTTAAATCATAAGTTGGACTTGCTTTTTGAGATGACCCAAATTTGAATTTGTAGGATCATTAGCCTTGGTTATGGCTTTTGTAATGAAAATCATGGTGAGTATGTATTACAAGACTTGCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTACGAGTCCAACCGTTTACAATGAAGCATGGCCGAACGATATCCATGGAGCTGGAGATAACCCTCCAGAGCAAGGAGTCCCAACAGTCATAACGTGGAGCTACGGTGGCAGCAGCGTGGCTGTTGAGGGGTCATGGGACAACTGGGAATCCAGGTTATTTCTTATCAATTCCAGGCTATCATAATTCTTTCAAGCTTCAGGCTTCATGAAACTAGTTCTACTGCATTTTGCATAAATAATGAAATATTATGCTACACTGCTTCTGCAGGAAGAGCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTTTGGTCCTTTCATCTGGAATATATCATTACAAGTTCATGGTCGATGGTCAACAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAAATGGGAAATGTCTTTAATCTCCTTGATGTTTCTGTAAGTGTGATTCTTCCCTTCATCTCCATGTCGTCCAGTCGACATGAACTTGAATTTGACTCGTTATTTGTGTTGAAAAATGATGTATTTAGTTTTTGAAAATGAAAATTACCAATTGTACAAAAATACTTGCTTGATTTCATGTAGGCATACAGCATACTAGTAGGATAAATATCTGAAAAGCAAGGCTGTGAGGTTTATAATTGCAACCTTAGTAATGTTTAATAAATGGTGAACTAATAGTAATGGATGATTATTTACACATTGCACCAGCACATTATTGGTCTTGACTCTTTACTCATCTGTTGGATATAGATATTGCTGTTAAGTTACGTAGAAAGTAGAAACTCGGATGGAAAAACAGGCTTACTGGACTGTTTTGACTGGTCGGAATGATGCCATGCCATTATTTTTACTTCTCTTGCACACCAACTCGATTAACATAAGTTGTTTCATATATACACATAAGAAACGTGATTAACCCAAGTACTTGAAAGTTTTGTTTTAATCCTCTATATATAGATGCTTGGGGTACGATTCAGAAAATATTTTCTATATCATACCATGAATATTTCACTCTACAGAGAACTGCCCTCATAACCTTCTGGTTTTGTGTGGGTTCTTGATTTTATCATTTTTTGGGGTGAGAACGAGAAATATCGACATGTTGATTAGAAAATTATAGTTCAAAACTGCAAGATGCCCAGATAACGGATTGTACAAGCTATCCTGTCCATTCTTCTGCGCAATGAAGTACATTCATTCTGCTTGCAAAGAGCACAATATCATATATTTCATGTATTTTCTTGCTTGTCAGAAGTGTTCACATTTTGGTAAACAATAGTTTTTTTCCAAGTGTTCTCAAGCAATACAGGGGAAGAGACACGAAAATATATGCACTAGACTAGAATAGTTGTATACCCAAGTACCCAACCTAAATGCTAGTATTTGAGCTACTAAAGAAAAGTGCACACACCCCCATCATATAAAGCATGCAGATCATAGAATTCTGATTGGATAGGATAGGTATAGGTGGTTTTAGGCTCTTCTTTCGTATATATTTGTTCTCCAAGTTCACATTCTCACCATCAGCCCATCTTGATAACTTCTCTGGAATAAAAGCAAAATCATATATTTTTCGCATCACATTTTGCTGTATGCGGCACACCCCCAGTGACCGAGTTTCATACACGACAGAGAAATGGAACAAAAAGGAATAGCAAATTGATGAAGGGTAGTTTTGTCCGAAGATAATTGTTGCAAGGGCCAAGGAGGGACATGTGGCAGAGGATTGTGGGCCACAAAGAGTTCATTCGACTGAAAGTCATTTCATATTTGTTTTGTGATTGCATTTTTTTTTTATCTGTTTTATGCTTTTTTTCTCAACAAGGGTAACAACGCCCGTCCCTAGGTCAAGCACCAGAGACATCGAAAGAGTAATTTCACAGGTGAGTTTCGAACCTCGGACCTTGAGGGGAGCTTATCTTCAAGTCCAAGTCTTCAACTGCGTCACCCCTTCGTGACTTATTTGTTTTATGCTTGCTGTATGAACAAGTCTCTCAGAGAGAATTGAGTAGGAATTTCTAAATAAAATTGGTAGCGAGTTCTATCAATTTTAGGCATATTATTTGTATCTTGCTAACTATTGAATGCACATTGAGAAAATTATTTTAGAAAGAGATGTGGAACTTCATTCAGTTATTGAAATGCAAGGACTAACTGATCGTATAATCCATCTTCAGCTTTCATCTTGGAGTTGTCTCTGTTTTGTAGGATTATGTGCCTGATATTTTACAGAGCGTGGCTGAGTTCGAGGCTCCATCATCACCAGAGACGAGTTACAGCCAGGCATTCCCTGGCGAGGAAGACTTCACCAAGGAGCCAGCAGCCGTGCCATCACAGCTGCACCTCACGGTTCTAGGAATGGAGAATCCCGACGAAGCTTCATCCTCAAAGCCACAGCATGTTGTGCTTAACCATCTTTTCATGGAGAAAGGATGGGCATCTCAATCTGTGGTTGCACTGGGGCTTACTCATAGGTTTCATTCGAAGTATGTCACGGTCGTCCTCTACAAACCGCCGAACAGGTAGTTATTTAGTTCGTCTTCCCACGTGTAATCTGATGGTTTAGTTGTCGACTTTTCGCACTGAACTTTGTAGAGTATCACGAGCTACTGCACCCTGCATCGTCTGTGGAGGAGTCTTGTTTTTATAGAACTGGTTAGCCAAAGTTGGCTTGCAACAAAACACTCTTAATTCTGATCAATATTTCTTCAACATATGAAGAAATCTGTGTTTTTATAGAACTGCTTGGCCAAAAAAGCTTAATTGCCTCTTCTCTAACTGCATCAATATAGTAGATTTGATCTGAGGGGA

mRNA sequence

GGAATCTACAAAAGTCAACAATGCAGTTGACTTAAGAGCGGTGGAAGTGGTGGCCGGCGGTGCAAACGGCGGCGTCAGAGTGGCAAATAGCATAAATAAAGCAAACCCAGAGGGCATTTTGGGTCATAATGTAAAATCTAGAGAGAGAAACTCGTCTTTCTCTCTCTCATCTCAGCTGCAGCTGAATTTCTCGTGGGGGCAATTTATCTATATTTCTTAATCTCCATTTGTCTTCTTCATCTTCTTCCCTAAATCAACGAACACACACACAAGAATTCCAAATTAGGGATTTGGATTGAGAATCTAAATCTCCATCCAATTGGTCCTCGTTTGTTCCAGTAATTTTGAATGTTGATTGCGATTCGATCCTCCGTCAGGTGGAAATCCGCGACTCGTTTCGGTTCTTAGGTCCGATGGGTAATGCCAATGGTCGAGAAGAGAGTTCTTCCGCCGCCGATGGACAAGGTTCGGTGATTGACACTTCCTTGGCTACTGAATCGACTAACGTTACTTCTTCAGATTCGATGGCAAATACTACTCCTCCTGGCAGCACTGCCAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTACGAGTCCAACCGTTTACAATGAAGCATGGCCGAACGATATCCATGGAGCTGGAGATAACCCTCCAGAGCAAGGAGTCCCAACAGTCATAACGTGGAGCTACGGTGGCAGCAGCGTGGCTGTTGAGGGGTCATGGGACAACTGGGAATCCAGGAAGAGCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTTTGGTCCTTTCATCTGGAATATATCATTACAAGTTCATGGTCGATGGTCAACAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAAATGGGAAATGTCTTTAATCTCCTTGATGTTTCTGATTATGTGCCTGATATTTTACAGAGCGTGGCTGAGTTCGAGGCTCCATCATCACCAGAGACGAGTTACAGCCAGGCATTCCCTGGCGAGGAAGACTTCACCAAGGAGCCAGCAGCCGTGCCATCACAGCTGCACCTCACGGTTCTAGGAATGGAGAATCCCGACGAAGCTTCATCCTCAAAGCCACAGCATGTTGTGCTTAACCATCTTTTCATGGAGAAAGGATGGGCATCTCAATCTGTGGTTGCACTGGGGCTTACTCATAGGTTTCATTCGAAGTATGTCACGGTCGTCCTCTACAAACCGCCGAACAGGTAGTTATTTAGTTCGTCTTCCCACGTGTAATCTGATGGTTTAGTTGTCGACTTTTCGCACTGAACTTTGTAGAGTATCACGAGCTACTGCACCCTGCATCGTCTGTGGAGGAGTCTTGTTTTTATAGAACTGGTTAGCCAAAGTTGGCTTGCAACAAAACACTCTTAATTCTGATCAATATTTCTTCAACATATGAAGAAATCTGTGTTTTTATAGAACTGCTTGGCCAAAAAAGCTTAATTGCCTCTTCTCTAACTGCATCAATATAGTAGATTTGATCTGAGGGGA

Coding sequence (CDS)

ATGGGTAATGCCAATGGTCGAGAAGAGAGTTCTTCCGCCGCCGATGGACAAGGTTCGGTGATTGACACTTCCTTGGCTACTGAATCGACTAACGTTACTTCTTCAGATTCGATGGCAAATACTACTCCTCCTGGCAGCACTGCCAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTACGAGTCCAACCGTTTACAATGAAGCATGGCCGAACGATATCCATGGAGCTGGAGATAACCCTCCAGAGCAAGGAGTCCCAACAGTCATAACGTGGAGCTACGGTGGCAGCAGCGTGGCTGTTGAGGGGTCATGGGACAACTGGGAATCCAGGAAGAGCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTTTGGTCCTTTCATCTGGAATATATCATTACAAGTTCATGGTCGATGGTCAACAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAAATGGGAAATGTCTTTAATCTCCTTGATGTTTCTGATTATGTGCCTGATATTTTACAGAGCGTGGCTGAGTTCGAGGCTCCATCATCACCAGAGACGAGTTACAGCCAGGCATTCCCTGGCGAGGAAGACTTCACCAAGGAGCCAGCAGCCGTGCCATCACAGCTGCACCTCACGGTTCTAGGAATGGAGAATCCCGACGAAGCTTCATCCTCAAAGCCACAGCATGTTGTGCTTAACCATCTTTTCATGGAGAAAGGATGGGCATCTCAATCTGTGGTTGCACTGGGGCTTACTCATAGGTTTCATTCGAAGTATGTCACGGTCGTCCTCTACAAACCGCCGAACAGGTAG

Protein sequence

MGNANGREESSSAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASSSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR

Homology

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BLAST of Sed0025887 vs. NCBI nr
Match: XP_022933563.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 467.2 bits (1201), Expect = 9.7e-128
Identity = 235/286 (82.17%), Postives = 253/286 (88.46%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQGSVID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGSVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK+LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
           SD  PDILQS+AEFEAP SPET+YSQ FP EEDF KEPAAVPSQLHLTVLGMEN DEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP NR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0025887 vs. NCBI nr
Match: XP_023531782.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 235/286 (82.17%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQG VID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGPVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRKSLQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKSLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
           SD  PDILQS+AEFEAP SPET+YSQ FP EEDF KEPAAVPSQLHLTVLGMEN DEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP NR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0025887 vs. NCBI nr
Match: KAG6588137.1 (SNF1-related protein kinase regulatory subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 465.3 bits (1196), Expect = 3.7e-127
Identity = 234/286 (81.82%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQG VID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGPVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK+LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
           SD  PDILQS+AEFEAP SPET+YSQ FP EEDF KEPAAVPSQLHLTVLGMEN DEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP NR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0025887 vs. NCBI nr
Match: XP_022967978.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 455.3 bits (1170), Expect = 3.8e-124
Identity = 230/286 (80.42%), Postives = 248/286 (86.71%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + A GQG VI +SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADAGGQGPVIGSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGG SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGGSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLP+IADEMGNVFNLL+V
Sbjct: 121 WDNWASRKILQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPHIADEMGNVFNLLNV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
           SD  PDILQS+AEFEAP SPET+YSQ FP EEDF KEPAAVPSQLHLTVLGMEN DEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP NR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0025887 vs. NCBI nr
Match: XP_022147666.1 (SNF1-related protein kinase regulatory subunit beta-1 [Momordica charantia])

HSP 1 Score: 448.7 bits (1153), Expect = 3.6e-122
Identity = 226/287 (78.75%), Postives = 248/287 (86.41%), Query Frame = 0


Query: 1   MGNANGREESSSA--------ADGQGS-VIDTSLATESTNVTSSDSMANTTPPGSTANLR 60
           MGNANGREE+SSA        ADG G  V D  +  E++NV SSDSM N TPPGS  N R
Sbjct: 1   MGNANGREETSSAGGGGSIVDADGHGGPVTDNPVPAETSNVVSSDSMGN-TPPGSPGNFR 60

Query: 61  SPILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEG 120
           SPILF+PQVPVAPL+GG  PT YNEAW N+ HG  DNPPEQG+PT+ITWSYGG +VAVEG
Sbjct: 61  SPILFSPQVPVAPLRGGNGPTTYNEAWQNEFHGVEDNPPEQGIPTIITWSYGGINVAVEG 120

Query: 121 SWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLD 180
           SWDNW SRK+LQR+GKDFSI++VL SG+YHYKF+VDGQQRYIPDLP+IADEMGNVFNLL+
Sbjct: 121 SWDNWASRKTLQRSGKDFSIVMVLPSGVYHYKFIVDGQQRYIPDLPFIADEMGNVFNLLN 180

Query: 181 VSDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEAS 240
           VSD VPDILQSVAEFE+P SPET+YSQAFP EEDF K+PAAVPSQLHLTVLGMEN DEAS
Sbjct: 181 VSDSVPDILQSVAEFESPPSPETTYSQAFPREEDFAKDPAAVPSQLHLTVLGMENADEAS 240

Query: 241 SSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SSKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP  R
Sbjct: 241 SSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLKR 286

[Close]

BLAST of Sed0025887 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.5e-88
Identity = 167/286 (58.39%), Postives = 208/286 (72.73%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVIDTSLATESTNVT--------SSDSMANTTPPGSTANLRS 60
           MGNANG++E ++A  G   V  +S  +   + +        SSDSM +++PPGS A   S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSM-SSSPPGSPARSPS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           P LFAPQVPVAPLQ   +P   N  W N      DNPPEQG+PT+ITW+ GG+ VAVEGS
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK LQ++GKD SIL VL SGIYHYK +VDG+ +YIPDLP++ADE+GNV N+LDV
Sbjct: 121 WDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
            ++VP+  +S+ EFEAP SP+ SY Q  P  ED+ KEP AVP QLHLT+LG    + A +
Sbjct: 181 HNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIA 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           +KPQHVVLNH+F+E+GW  QS+VALGLTHRF SKY+TVVLYKP  R
Sbjct: 241 TKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Sed0025887 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.1e-69
Identity = 142/291 (48.80%), Postives = 191/291 (65.64%), Query Frame = 0


Query: 1   MGNANGREE----SSSAADGQGSVI---DTSLATESTNVTSSDSMANTTPPGSTANLRSP 60
           MGN N REE    ++SA + + + I   +   A    N  +   +   +PP S    +SP
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPHSPRATQSP 60

Query: 61  ILFAPQVPVAPLQGGTSPTVYNEAW---PNDIHGAGDNPPEQGVPTVITWSYGGSSVAVE 120
           ++FAPQVPV PLQ      + N +W   P+ ++    N  EQG+PT+ITW +GG  +AVE
Sbjct: 61  LMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASN--EQGIPTMITWCHGGKEIAVE 120

Query: 121 GSWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLL 180
           GSWDNW++R  LQR+GKDF+I+ VL SG+Y Y+F+VDGQ R+ P+LP   D+ GN FN+L
Sbjct: 121 GSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNIL 180

Query: 181 DVSDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGM--ENPD 240
           D+ DYVP+ +QS++ FE P SPE SYS    G ED++KEP  VP  L +T+L +   NPD
Sbjct: 181 DLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPD 240

Query: 241 EASS-SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
             S   +PQHV+LNHL+M+KG +  SVVALG THRF +KYVTVVLYK   R
Sbjct: 241 IPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]

BLAST of Sed0025887 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.5e-25
Identity = 81/215 (37.67%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 77  AWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLS 136
           +W  D+  +   P +Q  PTVI WS GG  V + GS++NW ++  L ++  DF  +L L 
Sbjct: 61  SWQQDLEDS-VKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLP 120

Query: 137 SGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV--SDY-VPDILQ--SVAEFEA--- 196
            G + YKF VDGQ  + P  P +  ++G + NL+ V  SD+ V D L+  S+   E    
Sbjct: 121 EGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCR 180

Query: 197 --PSSPETSYSQ---AFPGEEDFTKEPAAVPSQLHLTVLGME---NPDEASSSKPQHVVL 256
              SSP   Y Q   AF  EE F K P  +P  L   +L  +   + D A   +P HV+L
Sbjct: 181 DLSSSPPGPYGQEMYAFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVML 240

Query: 257 NHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKP 276
           NHL+        SV+ L  THR+  KYVT +LYKP
Sbjct: 241 NHLYALS--IKDSVMVLSATHRYKKKYVTTLLYKP 271

[Close]

BLAST of Sed0025887 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.3e-25
Identity = 80/214 (37.38%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 78  WPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSS 137
           W  D+  +   P +Q  PTVI WS GG  V + GS++NW ++  L ++  DF  +L L  
Sbjct: 61  WQQDLDDS-VKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 138 GIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV--SDY-VPDILQ--SVAEFEA---- 197
           G + YKF VDGQ  + P  P +  ++G + NL+ V  SD+ V D L+  S+   E     
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180

Query: 198 -PSSPETSYSQ---AFPGEEDFTKEPAAVPSQLHLTVLGME---NPDEASSSKPQHVVLN 257
             SSP   Y Q    F  EE F K P  +P  L   +L  +   + D A   +P HV+LN
Sbjct: 181 LSSSPPGPYGQEMYVFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 240

Query: 258 HLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKP 276
           HL+        SV+ L  THR+  KYVT +LYKP
Sbjct: 241 HLYALS--TKDSVMVLSATHRYKKKYVTTLLYKP 270

[Close]

BLAST of Sed0025887 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24
Identity = 80/214 (37.38%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 78  WPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSS 137
           W  D+  +   P +Q  PTVI WS GG  V + GS++NW ++  L ++  DF  +L L  
Sbjct: 61  WQQDLDDS-VKPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 138 GIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV--SDY-VPDILQ--SVAEFEA---- 197
           G + YKF VDGQ  + P  P +  ++G + NL+ V  SD+ V D L+  S+   E     
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180

Query: 198 -PSSPETSYSQ---AFPGEEDFTKEPAAVPSQLHLTVLGME---NPDEASSSKPQHVVLN 257
             SSP   Y Q    F  EE F K P  +P  L   +L  +   + D A   +P HV+LN
Sbjct: 181 LSSSPPGPYGQEMYVFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 240

Query: 258 HLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKP 276
           HL+        SV+ L  THR+  KYVT +LYKP
Sbjct: 241 HLYALS--IKDSVMVLSATHRYKKKYVTTLLYKP 270

[Close]

BLAST of Sed0025887 vs. ExPASy TrEMBL
Match: A0A6J1F546 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440954 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.7e-128
Identity = 235/286 (82.17%), Postives = 253/286 (88.46%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + ADGQGSVID+SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADADGQGSVIDSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGGSSVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK+LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLPYIADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
           SD  PDILQS+AEFEAP SPET+YSQ FP EEDF KEPAAVPSQLHLTVLGMEN DEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP NR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0025887 vs. ExPASy TrEMBL
Match: A0A6J1HWQ6 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467354 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.8e-124
Identity = 230/286 (80.42%), Postives = 248/286 (86.71%), Query Frame = 0


Query: 1   MGNANGREESS--------SAADGQGSVIDTSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGREESS        + A GQG VI +SL +E++NV SSDSM N TPPGS  NLRS
Sbjct: 1   MGNANGREESSPGGGGGAVADAGGQGPVIGSSLVSETSNVVSSDSMVN-TPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQVPVAPLQGG  PT YNEAW N+ H   DNPPEQG+PT+ITWSYGG SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGGSVAIEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK LQRTGKDFSIL+VL SG+YHYKF+VDGQ+RYIPDLP+IADEMGNVFNLL+V
Sbjct: 121 WDNWASRKILQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPHIADEMGNVFNLLNV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
           SD  PDILQS+AEFEAP SPET+YSQ FP EEDF KEPAAVPSQLHLTVLGMEN DEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP NR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0025887 vs. ExPASy TrEMBL
Match: A0A6J1D322 (SNF1-related protein kinase regulatory subunit beta-1 OS=Momordica charantia OX=3673 GN=LOC111016534 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 226/287 (78.75%), Postives = 248/287 (86.41%), Query Frame = 0


Query: 1   MGNANGREESSSA--------ADGQGS-VIDTSLATESTNVTSSDSMANTTPPGSTANLR 60
           MGNANGREE+SSA        ADG G  V D  +  E++NV SSDSM N TPPGS  N R
Sbjct: 1   MGNANGREETSSAGGGGSIVDADGHGGPVTDNPVPAETSNVVSSDSMGN-TPPGSPGNFR 60

Query: 61  SPILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEG 120
           SPILF+PQVPVAPL+GG  PT YNEAW N+ HG  DNPPEQG+PT+ITWSYGG +VAVEG
Sbjct: 61  SPILFSPQVPVAPLRGGNGPTTYNEAWQNEFHGVEDNPPEQGIPTIITWSYGGINVAVEG 120

Query: 121 SWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLD 180
           SWDNW SRK+LQR+GKDFSI++VL SG+YHYKF+VDGQQRYIPDLP+IADEMGNVFNLL+
Sbjct: 121 SWDNWASRKTLQRSGKDFSIVMVLPSGVYHYKFIVDGQQRYIPDLPFIADEMGNVFNLLN 180

Query: 181 VSDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEAS 240
           VSD VPDILQSVAEFE+P SPET+YSQAFP EEDF K+PAAVPSQLHLTVLGMEN DEAS
Sbjct: 181 VSDSVPDILQSVAEFESPPSPETTYSQAFPREEDFAKDPAAVPSQLHLTVLGMENADEAS 240

Query: 241 SSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SSKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP  R
Sbjct: 241 SSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLKR 286

[Close]

BLAST of Sed0025887 vs. ExPASy TrEMBL
Match: A0A6J1H851 (SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461411 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.2e-118
Identity = 224/292 (76.71%), Postives = 245/292 (83.90%), Query Frame = 0


Query: 1   MGNANGREESSSA--------------ADGQGSVIDTSLATESTNVTSSDSMANTTPPGS 60
           MGNANG+EESS                AD QG  I +S+ +E++N  SSDSM N TPP S
Sbjct: 1   MGNANGKEESSPGGGSGGGGGAGGRGDADRQGPAIVSSVTSETSNAISSDSMGN-TPPDS 60

Query: 61  TANLRSPILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSS 120
               RSPILFAPQVPVAPL GG  PT +NEAW N++H A DNPP QG+PT+ITWSYGGSS
Sbjct: 61  PGKFRSPILFAPQVPVAPL-GGNGPTHFNEAWQNELHEAVDNPPVQGIPTIITWSYGGSS 120

Query: 121 VAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNV 180
           VAVEGSWDNW SRK+LQR+GKDFSIL+VL SG+YHYKF VDGQ+RYIPDLP+IADEMGNV
Sbjct: 121 VAVEGSWDNWASRKTLQRSGKDFSILMVLPSGVYHYKFTVDGQRRYIPDLPFIADEMGNV 180

Query: 181 FNLLDVSDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMEN 240
           FNLL+VSD VPDILQSV EFEAP SPET+YSQAFPGEEDF KEPAAVPSQLHLTVLGMEN
Sbjct: 181 FNLLNVSDSVPDILQSVVEFEAPQSPETTYSQAFPGEEDFAKEPAAVPSQLHLTVLGMEN 240

Query: 241 PDEASSSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
            DEASSSKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVL+KP NR
Sbjct: 241 ADEASSSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLFKPLNR 290

[Close]

BLAST of Sed0025887 vs. ExPASy TrEMBL
Match: A0A5D3CDJ6 (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00700 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.5e-118
Identity = 220/286 (76.92%), Postives = 243/286 (84.97%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVID--------TSLATESTNVTSSDSMANTTPPGSTANLRS 60
           MGNANGRE+S+  A   G   D        +S+ +E++NV SSDSM N TPP S    RS
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAISSVNSETSNVVSSDSMGN-TPPHSPGKFRS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           PILFAPQ+PVAPLQGG  PT YN AW N+  GA D+PPEQG+PT+ITWSYGGS+VAVEGS
Sbjct: 61  PILFAPQIPVAPLQGGNGPTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK+LQRTGKDFS+L+VL SG+YHYKF+VDGQ+RYIPDLP+IADEMGNVFNLL+V
Sbjct: 121 WDNWASRKTLQRTGKDFSLLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
           SD VPDILQSVAEFE P SPET+YSQ FP EEDF KEPAAVPSQLHLTVLGMEN DEASS
Sbjct: 181 SDSVPDILQSVAEFEPPQSPETTYSQTFPTEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKP NR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0025887 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 326.2 bits (835), Expect = 2.5e-89
Identity = 167/286 (58.39%), Postives = 208/286 (72.73%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVIDTSLATESTNVT--------SSDSMANTTPPGSTANLRS 60
           MGNANG++E ++A  G   V  +S  +   + +        SSDSM +++PPGS A   S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSM-SSSPPGSPARSPS 60

Query: 61  PILFAPQVPVAPLQGGTSPTVYNEAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGS 120
           P LFAPQVPVAPLQ   +P   N  W N      DNPPEQG+PT+ITW+ GG+ VAVEGS
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGS 120

Query: 121 WDNWESRKSLQRTGKDFSILLVLSSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDV 180
           WDNW SRK LQ++GKD SIL VL SGIYHYK +VDG+ +YIPDLP++ADE+GNV N+LDV
Sbjct: 121 WDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDV 180

Query: 181 SDYVPDILQSVAEFEAPSSPETSYSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASS 240
            ++VP+  +S+ EFEAP SP+ SY Q  P  ED+ KEP AVP QLHLT+LG    + A +
Sbjct: 181 HNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIA 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPPNR 279
           +KPQHVVLNH+F+E+GW  QS+VALGLTHRF SKY+TVVLYKP  R
Sbjct: 241 TKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Sed0025887 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 307.8 bits (787), Expect = 9.1e-84
Identity = 167/323 (51.70%), Postives = 208/323 (64.40%), Query Frame = 0


Query: 1   MGNANGREESSSAADGQGSVIDTSLATESTNVT--------SSDSMANTTPPGSTANLRS 60
           MGNANG++E ++A  G   V  +S  +   + +        SSDSM +++PPGS A   S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSM-SSSPPGSPARSPS 60

Query: 61  PILFAPQ-------------------------------------VPVAPLQGGTSPTVYN 120
           P LFAPQ                                     VPVAPLQ   +P   N
Sbjct: 61  PFLFAPQPTLLFHVTSYNICSPMRHLFHCLGLTCVPNGCISCRMVPVAPLQRANAPPPNN 120

Query: 121 EAWPNDIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVL 180
             W N      DNPPEQG+PT+ITW+ GG+ VAVEGSWDNW SRK LQ++GKD SIL VL
Sbjct: 121 IQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVL 180

Query: 181 SSGIYHYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSDYVPDILQSVAEFEAPSSPETS 240
            SGIYHYK +VDG+ +YIPDLP++ADE+GNV N+LDV ++VP+  +S+ EFEAP SP+ S
Sbjct: 181 PSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHS 240

Query: 241 YSQAFPGEEDFTKEPAAVPSQLHLTVLGMENPDEASSSKPQHVVLNHLFMEKGWASQSVV 279
           Y Q  P  ED+ KEP AVP QLHLT+LG    + A ++KPQHVVLNH+F+E+GW  QS+V
Sbjct: 241 YGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIATKPQHVVLNHVFIEQGWTPQSIV 300

[Close]

BLAST of Sed0025887 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-69
Identity = 134/261 (51.34%), Postives = 179/261 (68.58%), Query Frame = 0


Query: 24  SLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAW---PN 83
           S A++  +V   + M   +PP S    +SP++FAPQVPV PLQ      + N +W   P+
Sbjct: 2   SAASDGNHVAPPELMGQ-SPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPS 61

Query: 84  DIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIY 143
            ++    N  EQG+PT+ITW +GG  +AVEGSWDNW++R  LQR+GKDF+I+ VL SG+Y
Sbjct: 62  SLYEEASN--EQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVY 121

Query: 144 HYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSDYVPDILQSVAEFEAPSSPETSYSQAF 203
            Y+F+VDGQ R+ P+LP   D+ GN FN+LD+ DYVP+ +QS++ FE P SPE SYS   
Sbjct: 122 EYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLL 181

Query: 204 PGEEDFTKEPAAVPSQLHLTVLGM--ENPDEASS-SKPQHVVLNHLFMEKGWASQSVVAL 263
            G ED++KEP  VP  L +T+L +   NPD  S   +PQHV+LNHL+M+KG +  SVVAL
Sbjct: 182 LGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVAL 241

Query: 264 GLTHRFHSKYVTVVLYKPPNR 279
           G THRF +KYVTVVLYK   R
Sbjct: 242 GSTHRFLAKYVTVVLYKSLQR 259

[Close]

BLAST of Sed0025887 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-69
Identity = 134/261 (51.34%), Postives = 179/261 (68.58%), Query Frame = 0


Query: 24  SLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAW---PN 83
           S A++  +V   + M   +PP S    +SP++FAPQVPV PLQ      + N +W   P+
Sbjct: 4   SAASDGNHVAPPELMGQ-SPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPS 63

Query: 84  DIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIY 143
            ++    N  EQG+PT+ITW +GG  +AVEGSWDNW++R  LQR+GKDF+I+ VL SG+Y
Sbjct: 64  SLYEEASN--EQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVY 123

Query: 144 HYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSDYVPDILQSVAEFEAPSSPETSYSQAF 203
            Y+F+VDGQ R+ P+LP   D+ GN FN+LD+ DYVP+ +QS++ FE P SPE SYS   
Sbjct: 124 EYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLL 183

Query: 204 PGEEDFTKEPAAVPSQLHLTVLGM--ENPDEASS-SKPQHVVLNHLFMEKGWASQSVVAL 263
            G ED++KEP  VP  L +T+L +   NPD  S   +PQHV+LNHL+M+KG +  SVVAL
Sbjct: 184 LGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVAL 243

Query: 264 GLTHRFHSKYVTVVLYKPPNR 279
           G THRF +KYVTVVLYK   R
Sbjct: 244 GSTHRFLAKYVTVVLYKSLQR 261

[Close]

BLAST of Sed0025887 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 255.4 bits (651), Expect = 5.4e-68
Identity = 133/261 (50.96%), Postives = 179/261 (68.58%), Query Frame = 0


Query: 24  SLATESTNVTSSDSMANTTPPGSTANLRSPILFAPQVPVAPLQGGTSPTVYNEAW---PN 83
           S A++  +V   + M   +PP S    +SP++FAPQVPV PLQ      + N +W   P+
Sbjct: 2   SAASDGNHVAPPELMGQ-SPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPS 61

Query: 84  DIHGAGDNPPEQGVPTVITWSYGGSSVAVEGSWDNWESRKSLQRTGKDFSILLVLSSGIY 143
            ++    N  EQG+PT+ITW +GG  +AVEGSWDNW++ + LQR+GKDF+I+ VL SG+Y
Sbjct: 62  SLYEEASN--EQGIPTMITWCHGGKEIAVEGSWDNWKTSR-LQRSGKDFTIMKVLPSGVY 121

Query: 144 HYKFMVDGQQRYIPDLPYIADEMGNVFNLLDVSDYVPDILQSVAEFEAPSSPETSYSQAF 203
            Y+F+VDGQ R+ P+LP   D+ GN FN+LD+ DYVP+ +QS++ FE P SPE SYS   
Sbjct: 122 EYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLL 181

Query: 204 PGEEDFTKEPAAVPSQLHLTVLGM--ENPDEASS-SKPQHVVLNHLFMEKGWASQSVVAL 263
            G ED++KEP  VP  L +T+L +   NPD  S   +PQHV+LNHL+M+KG +  SVVAL
Sbjct: 182 LGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVAL 241

Query: 264 GLTHRFHSKYVTVVLYKPPNR 279
           G THRF +KYVTVVLYK   R
Sbjct: 242 GSTHRFLAKYVTVVLYKSLQR 258

The following BLAST results are available for this feature:

BLAST of Sed0025887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933563.1	9.7e-128	82.17	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita mosc...	[more]
XP_023531782.1	1.6e-127	82.17	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo...	[more]
KAG6588137.1	3.7e-127	81.82	SNF1-related protein kinase regulatory subunit beta-1, partial [Cucurbita argyro...	[more]
XP_022967978.1	3.8e-124	80.42	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxi...	[more]
XP_022147666.1	3.6e-122	78.75	SNF1-related protein kinase regulatory subunit beta-1 [Momordica charantia]	[more]

BLAST of Sed0025887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84VQ1	3.5e-88	58.39	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
Q9SCY5	2.1e-69	48.80	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
O43741	2.5e-25	37.67	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q9QZH4	9.3e-25	37.38	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]
Q6PAM0	1.2e-24	37.38	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]

BLAST of Sed0025887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F546	4.7e-128	82.17	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1HWQ6	1.8e-124	80.42	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1D322	1.7e-122	78.75	SNF1-related protein kinase regulatory subunit beta-1 OS=Momordica charantia OX=...	[more]
A0A6J1H851	1.2e-118	76.71	SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita moschata...	[more]
A0A5D3CDJ6	1.5e-118	76.92	SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo var. makuw...	[more]

BLAST of Sed0025887 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21170.1	2.5e-89	58.39	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	9.1e-84	51.70	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.1	1.3e-69	51.34	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	1.3e-69	51.34	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	5.4e-68	50.96	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 94..173 e-value: 2.1E-29 score: 101.5
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 87..176 e-value: 2.8E-22 score: 80.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 95..172 e-value: 1.79707E-24 score: 89.9656
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..175
IPR037170	SNF1-related protein kinase regulatory subunit beta-1	PANTHER	PTHR46316:SF9	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..175
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 92..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025887.1	Sed0025887.1	mRNA
Sed0025887.2	Sed0025887.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043562	cellular response to nitrogen levels
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031588	nucleotide-activated protein kinase complex
molecular_function	GO:1901982	maltose binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0019887	protein kinase regulator activity