Sed0025358.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTGTGGCCGGCACGCGCTCGATGGGGATTTGTGGTCCTCGCCGTCGGGTTCCCGTGGATGGTTGGCCCACCGTGCTCACGGCCCTATCGGCAGCTTACTAGTAGCCTAGGTGCTCTCCGGTATGTGGTTGGGTTTGTGGCCCTTTGGTGAGCGTCTTTGGATCTACCCTCACCGTGAGTATGAGACTGTGGGATTTGTGGTCCCTTAGCTACTGTGCTTCTTCTCTACTCGCAGGATCCCTCGGCCGGGCAGTATCCCCCCATTGCCTTAGAGATTTGTGGTCTCTATTGGCCTTTAGGTCTTTGGTTTGTGGCCTCGCATCGACCGCTCTGCGTGGCGTGGATCTTGGACATGGTTCCTAACCCTTTTCGCCCGGAGCTCGGGTTTTGTGGACCCCTTGATTATGTTGCTATCTTGCATGTTCGTGATGCTTTTGACTGATGCATGTCTTTACCCCGAGGTGGGGAATCCTTCTCGAGTTGCAAAACTCACCCTTTCCACCGTGGAATCCCACAGTACTACGAGATTGTATCGAGATGGGTGATCGGACGAGTGAAGATGACCATGGGACCCACCGCATTATTCTCATTAGAGTCGTCTAAATTTCTTCTTTCTGCATGAACTATTTAAGGGCGTGATAAATGGAACCTGTTTTATCGAGTTTTTATGTTTTGACTTTAGGGTACCCTAAGACTGTTTTAATGAATTTATCTCTTATAACCTTGTTCTTCCGAGTTGTTTTAAAGGAGTTTTGTTTTAAATTTACATGCCCGAGATTGTGAATACTATTTTCATGCATTGTGAGTTAAGGACTTAGGTTTAGACCCTAGATTGGGTCGGGTCCTTACATAAATAGTATGTGATATTTTCTCAAGTATCTGCCTCACCTTTGAGAGGTCAAGAGAACTTAGAATTTAACATATTCACCATTCCTAAGACATCTTATTCAACTTCCAAACCATGAAAGCCCAACTCCAAAGTGATTTCCAAACCTTATCTAATGGCAATTGTTTCCTCAAAATTCACATCAATAATCCCTTTAATTGGTTTTGAGGTGACAAACATGACCTCTCTCTTCAAATTTCTAATAATTAGACCGATCTCCTTCTTTTTGCTTCAAGATTAGTAGTTGCATCTACATTAATTTTGTATTTTAAATCTTTTGGTAGAGGGTCTATCTCCTAGTCTCAGTTTGACTCTACATCTTCTTCGTTAACTTGTGATTTGCTTATCTGAGTTCATACACATATTGGGTACAATATTCCCAATCTTTAGATTTCTTATGACTAATCCATCTGTGATAGGCCTTCCATTTGACTTAAAGTCTCTTGATTTTTTCCATTCTATTTCAAACACATAACCAGAAGCTCCTCTATTTGTTGAGCATGTAGTTTATTGAAGAACCACGGAATCAAATGCTAAAAAAGGGGACTCCTTCCAAGATGTATAAAAGGGGACTCCTTCCAAAAAACTTTTACTCGTCTACTATCCCAAATGGCTTGTTGATAGGTAGTTTCCACATCAAAACGGCATCATTTGCAAAAAATGTCGCCATCTATGCCCATTTTAATTAGGAACAAAGGAACAAAGTTATAGAAAAGACGCCAAATAAGTTTTTTTACCTTACTTGGAATATTTGCATTCCATAAAAAATTCCACCATGTTCCTCGTAACGTCATCGATCGAAGATGGTGGCTCCCCCCTAAGTTGAACAACTAGCCCATGAGCTGATTTAAATGTAAAGCGACCATCCTTCTCATAATGCCAAATCACCGGGTCCTTCCCTAATAATCTAGGTCTTGGAAGTTTTAAAATTTCATTTACATTCTCCTTACAAAATATACCATTGATTGTCTCTTTATCCCAGCTACCATTTAGTCTTAACAATTTGCAAACTCTCTTATTATCGTCGATACCACCTGAAGTAATGGGTCGTATGGTTGAAATTTGACAAAGCCAATTATCACTCTTAACATGAACTCTTTGACCATCACCAGCTCTCTACCTTATATCTTTGGACAGACGCTCACGATCTAAAATGCTTTTCCAAATAAAAGAGCTTTTGCTTCGAATTTTATATCACATACATTAGCAATTATAAAAATTGTTGACTAAATTAAAGTCGCACAAATCGAAAGTTTAAGCTTAGAAGCTTTTTATAGTTTATTGGCCGAATAGATACAATATTTTTTCTCTCTTTTTGAGAAAAAATACACACAAATTTAAAAGTTCATGAATATATTAGATATTTTTTTAAGAATGATTAAACAAAGACCTGAAATTCTATTCTTGTTGGAACCATTTTCCCAACCAGGTTTGGTTTTGGTGTATGTCTGATAACCAAACTATGATTTGGAATAGTACACGTGATGGAAATGATTTATCATAGTATTATTAATCTCTAATTCTCTAATCAACTAGAGTAAGTAATAGTTAGTCCAGTTAAAGTATTTAGTGATTTAAATATTGATAAAAAAAATTTAGAACCAATTGAAAAAAAGAAACCACAAATCAAATATCATTATTCTTAAATAAATAAAATTTAAATATCAATTTCTATGGTTGAATTTGTGACCACCGATTTAATTGAATTACTAATAAATAATGAAATATTTTCATAATATTGATAATATTTATTAACCTAGGTGCAATCTTGTTTTCTTTTTAATAAATTTTTGTTCTTATTTTCTGAAATCGTTACCTGTCATCTTTTCGTTATTAATTCAACCATCAAATCAATAAATTGGTTACTTCAGAAAATAATTTTTCACTTATGAGTAAATGATAATCAGCAGTACGCAATAATGACGTCATGATATATATTTCTGAATCATTAGTAAAAATATCACTTTTTACATTATAAAAAATCTGAATCATTTTCGTTCTTATGTTATCTGGTTGGTTAGAATTTTTTTTTAATGTAAGCACTCAAATTTTTTTATGGGGTCAATTAGTTCATACAATTCTATAGTTAATCCAATCCAACACAATTCATATATTTTCTCTTCATTAAAATTTTAAATTATATTTATTTTCATTTTGCTTTTCAAATCTAATTCATAATTCATATGTTTTTAAAAATTAAGAAAAGTTATATAGCATAAAACTCGTATTCAAGATATTTATTCCGCTAATATATACTTCCTCCTACTAATATGTTAAGAAGTTATGTACATATTCATAATATTATTCTTATTTATTTGTCCAAAGAAAATAGTATCAGTGATTCAAATTGAATTGAACAAATTGACTAATTATAATTTAAATAAAAGAAAACTATACTTCTAAGATTGAGTAATCCAAATTGTTTGAGATCTCAATTCTTTTATACACCTCTACCATTTCTAAATCATTGGATGTACTGACATGATAATGTTCAGATTGTTTCAAGGGATAAGTACAGTTAGTCGAAGACTTGACTTTATACTCTTCTCAAAGTTCTATGTTCGTGATTTACCTGTGACATTAATTGTAGACACCACCCGTATCTCTATTCTTTCGATGCGTCTCGGTGCCTCACCTAGATAGGCTTGGTTACCCTTATTTTTTAAAAAATGATAATTTTCAGATTGGAATTACGACAGAGAATCGGGCAGATAACAGTAAATTGAAGCCCATAATTAAGGATACGTGAGTACAAAATGGGAGTCGTTGGATGAAATTAATATCATACATCACTGGTGAGTACAAAATTCACCAACTTTCCTACTTTTTGTGCATCGCATTCAATCCATGTTCGACCCCACTCATGTTCTTTGCATGCTATAAAATTCCTGGACCCTCCATCTATTTACTTCCATCTCCATTTCTAAACCTCAAGCTCTCAAAAAAAAAAAAACAAAATGGCAAAGGCTGAGGGAAGTGGCAGTGCAGTGGGCCGAGCCGCGGTCGTGGTCGCCGCCGTTATCGGGTTGGCTATGATGTCTCAGTTCAAGACCGTTGAGGCGGCAGTTCACGATGTTGGCGGCGCTGGTGGCTGGAATTTTAACGTTGAAGATTGGCCCAATGGAAAAAGTTTTGTTGCGGGTGATATCCTTAGTATGTTCCTCTCAACTATATTAACCTTTTTTTTTGGTTTAGTAACAATTAATATATTTATTTATGTAAGTTAGAGTTATTATTATTTTTTTACAGCGATTGATTAAAGTATCATTTTGATTCACACATTTAAGATCGATGTTTTTGTTGATTTTTGAATCGGTCCAACTTTAATCTCTTAAATAAAATATATATTAAATTTAGACTCTATAATAAGTGTAACCTTTATTTTAATCAAAATTGGTTGAATGTGAATATATTTCTATAATGTATAGAAAAAAAAAAGATTTAACAGAGAGTAACCTATTATAAGTATCAATTTTTAAGTATTTTGAAAAGTACACAAAAATTGGATATTTGATATTTTATACTTCAAGAAGCACATATGAAAAACTCTGAAATACAGAGATAGAAATGGTAATTTAATCTTAAATAGTTATATATAGATATATATTCAATGTTATGATTATTAGATAAATTAATGTTTTATCTCAAAAATCAAATTAAGACAAAGTAGTTTATGCATGTTATAAAATATTTTCATGTATAATTTTCGATAAATATTGGGTTGAGTTTCATGTTTTCAATACCTTGGTATAACAACTAAAAAAAAAGTTTTCATACGCCTTATATTTATTATGAAATTTCATATTTCCAATATGAGATCCTCAATATATATTAATTTTGTTGCAGAGTTTAATTACAGTCCGTCGTCCCACAACGTGGTGGTGGTGGACAAAAACGGTTACGACAACTGTCAAACTCCGAGCGGTGCGAAAGTGTTTACTTCCGGTAGCGACGAGATAACGTTGCCAAAGGGGCCAAGCTATTTCATCTGTAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCAGTCGATGCTGCCTAACTTATTTATTATACTATGCTGTGTCTTTTGCCTTTTTAAGAAATGTCTGGTAATAAATAAAACTATATATATATATATATGTGTGTGTGTGTGTGACTGTTGGTTTATTTGCATGTTGAAATTTCACTTTTAATAAAAATAAAGTTGGTC ATGGTTTGTGGCCGGCACGCGCTCGATGGGGATTTGTGGTCCTCGCCGTCGGGTTCCCGTGGATGTTTTAAAATTTCATTTACATTCTCCTTACAAAATATACCATTGATTGTCTCTTTATCCCAGCTACCATTTAGTCTTAACAATTTGCAAACTCTCTTATTATCCTCTCAAAAAAAAAAAAACAAAATGGCAAAGGCTGAGGGAAGTGGCAGTGCAGTGGGCCGAGCCGCGGTCGTGGTCGCCGCCGTTATCGGGTTGGCTATGATGTCTCAGTTCAAGACCGTTGAGGCGGCAGTTCACGATGTTGGCGGCGCTGGTGGCTGGAATTTTAACGTTGAAGATTGGCCCAATGGAAAAAGTTTTGTTGCGGGTGATATCCTTAAGTTTAATTACAGTCCGTCGTCCCACAACGTGGTGGTGGTGGACAAAAACGGTTACGACAACTGTCAAACTCCGAGCGGTGCGAAAGTGTTTACTTCCGGTAGCGACGAGATAACGTTGCCAAAGGGGCCAAGCTATTTCATCTGTAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCAGTCGATGCTGCCTAACTTATTTATTATACTATGCTGTGTCTTTTGCCTTTTTAAGAAATGTCTGGTAATAAATAAAACTATATATATATATATATGTGTGTGTGTGTGTGACTGTTGGTTTATTTGCATGTTGAAATTTCACTTTTAATAAAAATAAAGTTGGTC ATGGTTTGTGGCCGGCACGCGCTCGATGGGGATTTGTGGTCCTCGCCGTCGGGTTCCCGTGGATGTTTTAAAATTTCATTTACATTCTCCTTACAAAATATACCATTGATTGTCTCTTTATCCCAGCTACCATTTAGTCTTAACAATTTGCAAACTCTCTTATTATCCTCTCAAAAAAAAAAAAACAAAATGGCAAAGGCTGAGGGAAGTGGCAGTGCAGTGGGCCGAGCCGCGGTCGTGGTCGCCGCCGTTATCGGGTTGGCTATGATGTCTCAGTTCAAGACCGTTGAGGCGGCAGTTCACGATGTTGGCGGCGCTGGTGGCTGGAATTTTAACGTTGAAGATTGGCCCAATGGAAAAAGTTTTGTTGCGGGTGATATCCTTAAGTTTAATTACAGTCCGTCGTCCCACAACGTGGTGGTGGTGGACAAAAACGGTTACGACAACTGTCAAACTCCGAGCGGTGCGAAAGTGTTTACTTCCGGTAGCGACGAGATAACGTTGCCAAAGGGGCCAAGCTATTTCATCTGTAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCAGTCGATGCTGCCTAA MVCGRHALDGDLWSSPSGSRGCFKISFTFSLQNIPLIVSLSQLPFSLNNLQTLLLSSQKKKNKMAKAEGSGSAVGRAAVVVAAVIGLAMMSQFKTVEAAVHDVGGAGGWNFNVEDWPNGKSFVAGDILKFNYSPSSHNVVVVDKNGYDNCQTPSGAKVFTSGSDEITLPKGPSYFICNFPGHCESGMKIAVDAA Homology
BLAST of Sed0025358.1 vs. NCBI nr
Match: XP_038885676.1 (basic blue protein-like [Benincasa hispida]) HSP 1 Score: 192.2 bits (487), Expect = 4.2e-45 Identity = 94/126 (74.60%), Postives = 109/126 (86.51%), Query Frame = 0
BLAST of Sed0025358.1 vs. NCBI nr
Match: XP_004144257.3 (basic blue protein-like [Cucumis sativus] >KAE8647192.1 hypothetical protein Csa_018915 [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 5.5e-45 Identity = 91/126 (72.22%), Postives = 106/126 (84.13%), Query Frame = 0
BLAST of Sed0025358.1 vs. NCBI nr
Match: XP_008441659.2 (PREDICTED: basic blue protein-like [Cucumis melo]) HSP 1 Score: 188.3 bits (477), Expect = 6.0e-44 Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 0
BLAST of Sed0025358.1 vs. NCBI nr
Match: XP_022993936.1 (basic blue protein-like [Cucurbita maxima]) HSP 1 Score: 186.8 bits (473), Expect = 1.8e-43 Identity = 92/125 (73.60%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Sed0025358.1 vs. NCBI nr
Match: KAA0058846.1 (basic blue protein-like [Cucumis melo var. makuwa] >TYK23773.1 basic blue protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 1.8e-43 Identity = 90/126 (71.43%), Postives = 105/126 (83.33%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36 Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy Swiss-Prot
Match: Q8LG89 (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2) HSP 1 Score: 146.0 bits (367), Expect = 4.5e-34 Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28 Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.7e-15 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.3e-14 Identity = 48/114 (42.11%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy TrEMBL
Match: A0A0A0KCU9 (Basic blue protein OS=Cucumis sativus OX=3659 GN=Csa_6G344240 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 2.2e-44 Identity = 90/126 (71.43%), Postives = 105/126 (83.33%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy TrEMBL
Match: A0A1S3B4N7 (basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103485741 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44 Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy TrEMBL
Match: A0A5A7UXE1 (Basic blue protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00980 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 8.5e-44 Identity = 90/126 (71.43%), Postives = 105/126 (83.33%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy TrEMBL
Match: A0A6J1JXQ8 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111489786 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 8.5e-44 Identity = 92/125 (73.60%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Sed0025358.1 vs. ExPASy TrEMBL
Match: A0A6J1FJW8 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111444901 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 5.5e-43 Identity = 91/125 (72.80%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Sed0025358.1 vs. TAIR 10
Match: AT2G02850.1 (plantacyanin ) HSP 1 Score: 146.0 bits (367), Expect = 3.2e-35 Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 0
BLAST of Sed0025358.1 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 5.7e-16 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0
BLAST of Sed0025358.1 vs. TAIR 10
Match: AT3G60280.1 (uclacyanin 3 ) HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15 Identity = 48/114 (42.11%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Sed0025358.1 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 3.7e-15 Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Sed0025358.1 vs. TAIR 10
Match: AT1G17800.1 (early nodulin-like protein 22 ) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14 Identity = 49/137 (35.77%), Postives = 76/137 (55.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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