Sed0023941.1 (mRNA) Chayote v1

Overview


Name	Sed0023941.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein 830-like isoform X3
Location	LG03: 46196245 .. 46198163 (+)
Sequence length	1312
RNA-Seq Expression	Sed0023941.1
Synteny	Sed0023941.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTTCTCCGCGTTTTATTCACACTTTATTTTTATCACCTCATTATTTGGGACTATATATATAACAGATTTAAAAGAAAAATCCCTAATTCATTCTTCACTTTCACTGTTAATTTCTCGATTTTCGATTTCGGAGTTCGATCCAGACGCGTTTGTGAGAATGAAGACGAAGATCATGACAATGTTGAATCTGATTGATCCGAACGATGCTGTGGGAAAGCATTTGCATCAAATGGCGTTGATACTGTTGAGGCAGGAGGAATTGGTGATGGAGATCCAACGGCAGCGATTTCTTAGTCAGAAAGCCAGGTCACATCCGATCTTGTCCCAACCGGAGGTCGCGATTCGATCGGAACCGCCGGGTACGGCGGCGGTTGCGGCGGCGTCGGCGTCGGCGGTGGCGCCGTCGTTCAATGACGGTGAAGTACTTGAGGCTGATAAAACAGAAGAACGAGTAGTACTGGTATGGCTCTATTCTGTTCTTACTCGTAGTATTGGGGATTTTACTTTTGATTTTAGAAAGTTTTTTAGTTTGGTTTGGAAAATTAGGGTTTCGAAATTGTATTTGATTCTATTCCAAGTCTTAGCAATAACACAAGAATTAATTTACTGTATGTAGACATTTAATGATCACGTAAATTAATTCGCTATCTGTTTGTTTGAAATCTGAGGCAGTTTGAAACAGATTTAGAAATAATGTCATTCTTTCATTCAAGAGTTTTTGTTGTATACATACAAGAAAATATGCTATTAGATATGGATGGATAAGCTGTTATTTTCAATTTCTAGTTTTAGGTTTACTAGATTGGGTTGTTATATTTTTCAATTTATTCACACAGAGAAAATAAAAGTTTAAGTCATTATAAACTAATTAAAGACTTCAGTATCTGCTATTTGTATGAAGATTGTTTGTGTGTTGTAGCAATTTTTCTTATTTGTTTCAGATCATTCCATTTATTATATAATGTAACTATAAGATCCATCAGGTTGCATAAACATTATTTGGTATTCACTTAATGTTAGGATTACAATTAGTAGAGTTTGTTCCTTATGGATTTGGGAATGTGCAGGAAAAACCCAACCTGAATGCATTAGGACAAAAGCGAAAGGATGTGCAGGAAAAACACGACCCGAATGTATTAGGACAAAAGCGAAAGGCCGAGACGCCATTGTTATCTACTAATGATCACATCCAACCATTTGATAAGGTGAAAGAGTGGAGATGTGCACTGTGTCGAGTTACCGTGAGAAACGAAGGATCATTTAAGCAGCACCTTCGTGGCAAGAAGCACAAGCACAGGGAGGAAGATCGGCTGAGGACTCGAAAGGCGAGCAACGTCTCCAGGGATATGCACGAGCAATTACCGAACAAAAGGAGGAAGCTAAGCTCTGGCTCTGCTGGTGCAAAAGAACATGAATCAAAAGTTGGAAGAACCCTTCAATGTGATAAAACTGGCCTGAATGCAACAATCCCAAACTTTATGAAACCATATGCCACAAAGGATAAGCAACACAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTAATACTACAAATAACATGTTTGGTCATCTTAATGGGAAGAAACACAGGGCAAATCATCAGGAATAAAAAGAAAGCTGATGTAGATATTGGATAGAAGAGGTTGGCTCGACGAACGACAGATGTCGCCTGGTAATTGTCTTAAAGTTTTACAGTCTGTTCATCTTATGTAAATTTATGATGTGATTCTGGTCTTTAAAGTTAAACAGTTTGTTCATCTTAGGTAAATCTATGATGAGTAATTAATTCTATGCTGATGGATTGTTCCAAAAGGAATATTGAACAATTTTGTACTAATTTTTTTTGAAAACGAAATGTCAATTCTTATTATCAATATTACGGTTATTTGGAACCAAAATGTTCATAAG

mRNA sequence

TATTTTTCTCCGCGTTTTATTCACACTTTATTTTTATCACCTCATTATTTGGGACTATATATATAACAGATTTAAAAGAAAAATCCCTAATTCATTCTTCACTTTCACTGTTAATTTCTCGATTTTCGATTTCGGAGTTCGATCCAGACGCGTTTGTGAGAATGAAGACGAAGATCATGACAATGTTGAATCTGATTGATCCGAACGATGCTGTGGGAAAGCATTTGCATCAAATGGCGTTGATACTGTTGAGGCAGGAGGAATTGGTGATGGAGATCCAACGGCAGCGATTTCTTAGTCAGAAAGCCAGGTCACATCCGATCTTGTCCCAACCGGAGGTCGCGATTCGATCGGAACCGCCGGGTACGGCGGCGGTTGCGGCGGCGTCGGCGTCGGCGGTGGCGCCGTCGTTCAATGACGGTGAAGTACTTGAGGCTGATAAAACAGAAGAACGAGTAGTACTGGAAAAACCCAACCTGAATGCATTAGGACAAAAGCGAAAGGATGTGCAGGAAAAACACGACCCGAATGTATTAGGACAAAAGCGAAAGGCCGAGACGCCATTGTTATCTACTAATGATCACATCCAACCATTTGATAAGGTGAAAGAGTGGAGATGTGCACTGTGTCGAGTTACCGTGAGAAACGAAGGATCATTTAAGCAGCACCTTCGTGGCAAGAAGCACAAGCACAGGGAGGAAGATCGGCTGAGGACTCGAAAGGCGAGCAACGTCTCCAGGGATATGCACGAGCAATTACCGAACAAAAGGAGGAAGCTAAGCTCTGGCTCTGCTGGTGCAAAAGAACATGAATCAAAAGTTGGAAGAACCCTTCAATGTGATAAAACTGGCCTGAATGCAACAATCCCAAACTTTATGAAACCATATGCCACAAAGGATAAGCAACACAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTAATACTACAAATAACATGTTTGGTCATCTTAATGGGAAGAAACACAGGGCAAATCATCAGGAATAAAAAGAAAGCTGATGTAGATATTGGATAGAAGAGGTTGGCTCGACGAACGACAGATGTCGCCTGGTAATTGTCTTAAAGTTTTACAGTCTGTTCATCTTATGTAAATTTATGATGTGATTCTGGTCTTTAAAGTTAAACAGTTTGTTCATCTTAGGTAAATCTATGATGAGTAATTAATTCTATGCTGATGGATTGTTCCAAAAGGAATATTGAACAATTTTGTACTAATTTTTTTTGAAAACGAAATGTCAATTCTTATTATCAATATTACGGTTATTTGGAACCAAAATGTTCATAAG

Coding sequence (CDS)

ATGAAGACGAAGATCATGACAATGTTGAATCTGATTGATCCGAACGATGCTGTGGGAAAGCATTTGCATCAAATGGCGTTGATACTGTTGAGGCAGGAGGAATTGGTGATGGAGATCCAACGGCAGCGATTTCTTAGTCAGAAAGCCAGGTCACATCCGATCTTGTCCCAACCGGAGGTCGCGATTCGATCGGAACCGCCGGGTACGGCGGCGGTTGCGGCGGCGTCGGCGTCGGCGGTGGCGCCGTCGTTCAATGACGGTGAAGTACTTGAGGCTGATAAAACAGAAGAACGAGTAGTACTGGAAAAACCCAACCTGAATGCATTAGGACAAAAGCGAAAGGATGTGCAGGAAAAACACGACCCGAATGTATTAGGACAAAAGCGAAAGGCCGAGACGCCATTGTTATCTACTAATGATCACATCCAACCATTTGATAAGGTGAAAGAGTGGAGATGTGCACTGTGTCGAGTTACCGTGAGAAACGAAGGATCATTTAAGCAGCACCTTCGTGGCAAGAAGCACAAGCACAGGGAGGAAGATCGGCTGAGGACTCGAAAGGCGAGCAACGTCTCCAGGGATATGCACGAGCAATTACCGAACAAAAGGAGGAAGCTAAGCTCTGGCTCTGCTGGTGCAAAAGAACATGAATCAAAAGTTGGAAGAACCCTTCAATGTGATAAAACTGGCCTGAATGCAACAATCCCAAACTTTATGAAACCATATGCCACAAAGGATAAGCAACACAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTAATACTACAAATAACATGTTTGGTCATCTTAATGGGAAGAAACACAGGGCAAATCATCAGGAATAA

Protein sequence

MKTKIMTMLNLIDPNDAVGKHLHQMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIRSEPPGTAAVAAASASAVAPSFNDGEVLEADKTEERVVLEKPNLNALGQKRKDVQEKHDPNVLGQKRKAETPLLSTNDHIQPFDKVKEWRCALCRVTVRNEGSFKQHLRGKKHKHREEDRLRTRKASNVSRDMHEQLPNKRRKLSSGSAGAKEHESKVGRTLQCDKTGLNATIPNFMKPYATKDKQHKFKFWCEKCKVGANTTNNMFGHLNGKKHRANHQE

Homology

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BLAST of Sed0023941.1 vs. NCBI nr
Match: XP_023536654.1 (uncharacterized protein LOC111797967 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-36
Identity = 125/300 (41.67%), Postives = 172/300 (57.33%), Query Frame = 0


Query: 24  QMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIR--------------SEPPGT 83
           +M L+ LR+E+L++EI+RQ+FL + AR   +L + E+AIR              S P   
Sbjct: 65  EMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGGPFSAP--A 124

Query: 84  AAVAAASASAVAPSFNDGEVLEADKTEERV----VLEKPNLNAL-------------GQK 143
           A ++  S++ V  S N+   +E  ++ +R+    V   P +  L              ++
Sbjct: 125 APLSLPSSATVVQSSNEWPKVEQLESSDRLGFGAVPSPPRVRPLMVDDKTERQVLQDDER 184

Query: 144 RKDVQEKHDPNVLGQKRKAETPLLSTNDHIQPF----DKVKEWRCALCRVTVRNEGSFKQ 203
              + EK DPNV  +KRKAETP   T+D +QPF    +   EW C LC+VTV ++ +F Q
Sbjct: 185 ELIILEKPDPNVFREKRKAETPSTFTDD-VQPFSVKQNPKDEWICVLCQVTVLSQSTFDQ 244

Query: 204 HLRGKKHKHREEDRLRTRKASNVSRDMHEQLPNKRRKL-----SSGSAGAKEHESKVGRT 263
           HL GKKHK R+E  LR +KASNV+    E LPNKRRKL     +SGS  A+  ESK G T
Sbjct: 245 HLHGKKHK-RKEAGLRAQKASNVA---PEPLPNKRRKLVEVEATSGSTCAEVKESKDGET 304

Query: 264 LQCDKTGLNATI---PNFMKPYATKDKQHKFKFWCEKCKVGANTTNNMFGHLNGKKHRAN 281
           LQC+KTG ++ +    NF+       K+ KFKFWCEKCKVGA  T  M  HLNGKKH+A+
Sbjct: 305 LQCEKTGSSSDLKLDENFITEDVVVGKK-KFKFWCEKCKVGAFATEVMVDHLNGKKHKAS 356

[Close]

BLAST of Sed0023941.1 vs. NCBI nr
Match: XP_022969583.1 (uncharacterized protein LOC111468562 [Cucurbita maxima])

HSP 1 Score: 158.7 bits (400), Expect = 7.5e-35
Identity = 128/304 (42.11%), Postives = 169/304 (55.59%), Query Frame = 0


Query: 24  QMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIR--------------SEP--- 83
           +M L+ LR+E+L++EI+RQ+FL + AR   +L + E+AIR              S P   
Sbjct: 64  EMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGAPFSAPAAP 123

Query: 84  ---PGTAAVAAAS---------ASAVAPSFNDG------EVLEADKTEERVVLEKPNLNA 143
              P +A V  +S          S+    F  G      + L AD   ER VL+      
Sbjct: 124 LSLPSSATVVQSSNEWPKVEQLESSDRLGFGPGPLPPRVQPLMADDKTERQVLQN----- 183

Query: 144 LGQKRKDVQEKHDPNVLGQKRKAETPLLSTNDHIQPF----DKVKEWRCALCRVTVRNEG 203
             ++   + EK DPNV  +KRKAETP   TND +QPF    +   EW C LC+VTV ++ 
Sbjct: 184 -DERELIILEKPDPNVFREKRKAETPSTFTND-VQPFSVKQNPKDEWICVLCQVTVLSQS 243

Query: 204 SFKQHLRGKKHKHREEDRLRTRKASNVSRDMHEQLPNKRRKL-----SSGSAGAKEHESK 263
           +F QHL GKKHK R+E  LR +KASNV+    E LPNKRRKL     +SG   A+  ESK
Sbjct: 244 TFDQHLHGKKHK-RKEACLRAQKASNVA---PEPLPNKRRKLVEVEATSGLTCAEVKESK 303

Query: 264 VGRTLQCDKTGLNATIPNFMKPYATKD---KQHKFKFWCEKCKVGANTTNNMFGHLNGKK 281
            G TLQC+KTG ++ +    +   T+D    + KFKFWCEKCKVGA  T  M  HLNGKK
Sbjct: 304 DGETLQCEKTGSSSDL-KLDENLITEDVLVGKKKFKFWCEKCKVGAFATEVMVDHLNGKK 355

[Close]

BLAST of Sed0023941.1 vs. NCBI nr
Match: XP_022937456.1 (uncharacterized protein LOC111443862 [Cucurbita moschata] >KAG7020828.1 hypothetical protein SDJN02_17516 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-33
Identity = 120/295 (40.68%), Postives = 166/295 (56.27%), Query Frame = 0


Query: 29  LLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIR--------------SEPPGTAAVAA 88
           LLR+E+L++EI+RQ+FL + AR   +L + E+AIR              S P   A +  
Sbjct: 68  LLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGAPFSAP--AAPLPL 127

Query: 89  ASASAVAPSFNDGEVLEADKTEERVVL---------------EKPNLNALGQKRKD--VQ 148
            S++ V  S N+   +E  ++ +R+ +               +K     L    ++  + 
Sbjct: 128 PSSATVVQSSNEWPKVEQLESSDRLGIGAVPLPPRVQPLMADDKTERQVLQDDERELIIL 187

Query: 149 EKHDPNVLGQKRKAETPLLSTNDHIQPF----DKVKEWRCALCRVTVRNEGSFKQHLRGK 208
           EK DP V  +KRKAETP   T+D +QPF    +   EW C LC+VTV ++ +F QHL GK
Sbjct: 188 EKPDPKVFREKRKAETPSTFTDD-VQPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGK 247

Query: 209 KHKHREEDRLRTRKASNVSRDMHEQLPNKRRKL-----SSGSAGAKEHESKVGRTLQCDK 268
           KHK R+E  LR +KASNV+    E LPNKRRKL     +SG   A+  ESK G TLQC+K
Sbjct: 248 KHK-RKEAGLRAQKASNVA---PEPLPNKRRKLVEVEATSGLTCAEVKESKDGETLQCEK 307

Query: 269 TGLNATIPNFMKPYATKD---KQHKFKFWCEKCKVGANTTNNMFGHLNGKKHRAN 281
           TG ++ +    +   T+D    + KFKFWCEKCKVGA  T  M  HLNGKKH+A+
Sbjct: 308 TGSSSDL-KLDENLITEDVLVGKKKFKFWCEKCKVGAFATEVMVDHLNGKKHKAS 354

[Close]

BLAST of Sed0023941.1 vs. NCBI nr
Match: KAG6586051.1 (Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.4 bits (350), Expect = 4.7e-29
Identity = 114/285 (40.00%), Postives = 159/285 (55.79%), Query Frame = 0


Query: 24  QMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIR--------------SEPPGT 83
           +M L+ LR+E+L++EI+RQ+FL + AR   +L + E+AIR              S P   
Sbjct: 65  EMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGAPFSAP--A 124

Query: 84  AAVAAASASAVAPSFNDGEVLEADKTEERV----VLEKPNLNAL-------------GQK 143
           A +   S++ V  S N+   +E  ++ +R+    V   P +  L              ++
Sbjct: 125 APLPLPSSATVVQSSNEWPKVEQLESSDRLGFGAVPLPPRVQPLMADDKTERQLLQDDER 184

Query: 144 RKDVQEKHDPNVLGQKRKAETPLLSTNDHIQPF----DKVKEWRCALCRVTVRNEGSFKQ 203
              + EK DP V  +KRKAETP   T+D +QPF    +   EW C LC+VTV ++ +F Q
Sbjct: 185 ELIILEKPDPKVFREKRKAETPSTFTDD-VQPFSVKQNPKDEWICVLCQVTVLSQSTFDQ 244

Query: 204 HLRGKKHKHREEDRLRTRKASNVSRDMHEQLPNKRRKL-----SSGSAGAKEHESKVGRT 263
           HL GKKHK R+E  LR +KASNV+    E LPNKRRKL     +SGS  A+  ESK G T
Sbjct: 245 HLHGKKHK-RKEAGLRAQKASNVA---PEPLPNKRRKLVEVEATSGSTCAEVKESKDGLT 304

Query: 264 LQCDKTGLNATIPNFMKPYATKD---KQHKFKFWCEKCKVGANTT 266
           LQC+KTG ++ +    +   T+D    + KFKFWCEKCKVGA  T
Sbjct: 305 LQCEKTGSSSDL-KLDENLITEDVLVGKKKFKFWCEKCKVGAFAT 341

[Close]

BLAST of Sed0023941.1 vs. NCBI nr
Match: XP_038890955.1 (uncharacterized protein LOC120080381 isoform X2 [Benincasa hispida])

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-28
Identity = 126/346 (36.42%), Postives = 172/346 (49.71%), Query Frame = 0


Query: 16  DAVGKHLHQMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIRS----------E 75
           D+  + L +M L+ LR+E+L+ EI+RQRFL ++AR   +L + E+AIR           +
Sbjct: 49  DSNKEMLWEMELMRLREEKLLAEIERQRFLKEEARRELMLFEREMAIRGVAQLAGFPLRQ 108

Query: 76  P-----PGTAAVAAASASA--------VAPSFNDGEVLEADKTEER-------------- 135
           P     P +AA AA S S+        V  SF++   +E  K+ +R              
Sbjct: 109 PQRWGVPFSAAAAAPSPSSCPLPSPAVVVQSFHEWRKMEQAKSSDRLGFRAVALPPPPPP 168

Query: 136 -----VVLEKPNLNALGQKRKDVQEKHDPNVLGQKRKAETPLLSTND---HIQPFDKVKE 195
                +V +K  L  L   ++++ EK DPNV  +KRKA T  LSTND    I       E
Sbjct: 169 RIQPLMVEDKKELEVLEAVKRELIEKPDPNVFREKRKASTS-LSTNDIQLSIVKKASKDE 228

Query: 196 WRCALCRVTVRNEGSFKQHLRGKKHKHREEDRLRTRKASNVSRDMHEQLPNKRRK----- 255
           W C L +VT  N+  F QHL GKKH+ R+E  LR +K  N+SR   E L  KRRK     
Sbjct: 229 WSCVLYKVTTTNKMMFNQHLHGKKHQ-RKEASLRAQKEINISRAAPESLLKKRRKLCKAT 288

Query: 256 --LSSGSAGAKEHESKVGRTLQCDKT----GLNA-TIPNFMKPYATKDK----------- 284
             LSS + GA+  ESK   TLQ +K      +NA  +P+F+K    +D            
Sbjct: 289 EMLSSAAVGAEAKESK-HETLQGEKNDGSFDMNALVVPSFLKLGDKEDNKQQNNQITFGQ 348

[Close]

BLAST of Sed0023941.1 vs. ExPASy TrEMBL
Match: A0A6J1I1E4 (uncharacterized protein LOC111468562 OS=Cucurbita maxima OX=3661 GN=LOC111468562 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.6e-35
Identity = 128/304 (42.11%), Postives = 169/304 (55.59%), Query Frame = 0


Query: 24  QMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIR--------------SEP--- 83
           +M L+ LR+E+L++EI+RQ+FL + AR   +L + E+AIR              S P   
Sbjct: 64  EMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGAPFSAPAAP 123

Query: 84  ---PGTAAVAAAS---------ASAVAPSFNDG------EVLEADKTEERVVLEKPNLNA 143
              P +A V  +S          S+    F  G      + L AD   ER VL+      
Sbjct: 124 LSLPSSATVVQSSNEWPKVEQLESSDRLGFGPGPLPPRVQPLMADDKTERQVLQN----- 183

Query: 144 LGQKRKDVQEKHDPNVLGQKRKAETPLLSTNDHIQPF----DKVKEWRCALCRVTVRNEG 203
             ++   + EK DPNV  +KRKAETP   TND +QPF    +   EW C LC+VTV ++ 
Sbjct: 184 -DERELIILEKPDPNVFREKRKAETPSTFTND-VQPFSVKQNPKDEWICVLCQVTVLSQS 243

Query: 204 SFKQHLRGKKHKHREEDRLRTRKASNVSRDMHEQLPNKRRKL-----SSGSAGAKEHESK 263
           +F QHL GKKHK R+E  LR +KASNV+    E LPNKRRKL     +SG   A+  ESK
Sbjct: 244 TFDQHLHGKKHK-RKEACLRAQKASNVA---PEPLPNKRRKLVEVEATSGLTCAEVKESK 303

Query: 264 VGRTLQCDKTGLNATIPNFMKPYATKD---KQHKFKFWCEKCKVGANTTNNMFGHLNGKK 281
            G TLQC+KTG ++ +    +   T+D    + KFKFWCEKCKVGA  T  M  HLNGKK
Sbjct: 304 DGETLQCEKTGSSSDL-KLDENLITEDVLVGKKKFKFWCEKCKVGAFATEVMVDHLNGKK 355

[Close]

BLAST of Sed0023941.1 vs. ExPASy TrEMBL
Match: A0A6J1FAE1 (uncharacterized protein LOC111443862 OS=Cucurbita moschata OX=3662 GN=LOC111443862 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.9e-34
Identity = 120/295 (40.68%), Postives = 166/295 (56.27%), Query Frame = 0


Query: 29  LLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIR--------------SEPPGTAAVAA 88
           LLR+E+L++EI+RQ+FL + AR   +L + E+AIR              S P   A +  
Sbjct: 68  LLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGAPFSAP--AAPLPL 127

Query: 89  ASASAVAPSFNDGEVLEADKTEERVVL---------------EKPNLNALGQKRKD--VQ 148
            S++ V  S N+   +E  ++ +R+ +               +K     L    ++  + 
Sbjct: 128 PSSATVVQSSNEWPKVEQLESSDRLGIGAVPLPPRVQPLMADDKTERQVLQDDERELIIL 187

Query: 149 EKHDPNVLGQKRKAETPLLSTNDHIQPF----DKVKEWRCALCRVTVRNEGSFKQHLRGK 208
           EK DP V  +KRKAETP   T+D +QPF    +   EW C LC+VTV ++ +F QHL GK
Sbjct: 188 EKPDPKVFREKRKAETPSTFTDD-VQPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGK 247

Query: 209 KHKHREEDRLRTRKASNVSRDMHEQLPNKRRKL-----SSGSAGAKEHESKVGRTLQCDK 268
           KHK R+E  LR +KASNV+    E LPNKRRKL     +SG   A+  ESK G TLQC+K
Sbjct: 248 KHK-RKEAGLRAQKASNVA---PEPLPNKRRKLVEVEATSGLTCAEVKESKDGETLQCEK 307

Query: 269 TGLNATIPNFMKPYATKD---KQHKFKFWCEKCKVGANTTNNMFGHLNGKKHRAN 281
           TG ++ +    +   T+D    + KFKFWCEKCKVGA  T  M  HLNGKKH+A+
Sbjct: 308 TGSSSDL-KLDENLITEDVLVGKKKFKFWCEKCKVGAFATEVMVDHLNGKKHKAS 354

[Close]

BLAST of Sed0023941.1 vs. ExPASy TrEMBL
Match: A0A0A0LJ38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035540 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.5e-28
Identity = 119/345 (34.49%), Postives = 169/345 (48.99%), Query Frame = 0


Query: 3   TKIMTMLNLIDPNDAVGKHLHQMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAI 62
           T I T+    + N+ +  HL +M  + LR+E+L+ EI+R+RFL ++AR    L + E+AI
Sbjct: 65  TNIGTLRQPFNLNEEM--HL-EMEFMRLREEKLIGEIERERFLKEEARRELRLFEREIAI 124

Query: 63  R-------------------------SEPPGTAAVA---AASASAVAPSFNDGEVLEADK 122
           R                         + PP +A      + S + V  S+++ + +E  K
Sbjct: 125 RGLTQSAVGYPFQQPQRWVAPPFCPVTGPPSSAVAVPCPSPSQALVVQSYHEWQNMEQVK 184

Query: 123 TEERV----VLEKPNL---------NALGQKRKDVQEKHDPNVLGQKRKAETPLLSTNDH 182
           T +R+    V  +P +          A  +++  V EK  PN   ++RKAET    +  H
Sbjct: 185 TSDRLGFGAVALRPRIQPLMVEDKKEAANERKLIVLEKPVPNAFREERKAETTTSPSIKH 244

Query: 183 IQPFDKVK----EWRCALCRVTVRNEGSFKQHLRGKKHKHREEDRLRTRKASNVSRDMHE 242
           I P    K    EW CALC+VT   E SF  HLRGKKH+ R+E  LR  K S VSR  HE
Sbjct: 245 ILPSLVKKTSKDEWSCALCQVTTAEEKSFNDHLRGKKHR-RKEANLRAEKESKVSRVAHE 304

Query: 243 QLPNKRRKLSSGSA-----GAKEHESKVGRTLQCDKT----GLNATIPNFMKPYATKDKQ 280
            L  KRRKL    A     GA+  E+K G     +K+     +NA IP F+K    + ++
Sbjct: 305 PLSKKRRKLQKAMAAAAGGGAEGKETKDGEADVGEKSEGSVDMNALIPYFLKKENKQQQE 364

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BLAST of Sed0023941.1 vs. ExPASy TrEMBL
Match: A0A6J1E048 (uncharacterized protein LOC111024695 OS=Momordica charantia OX=3673 GN=LOC111024695 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.3e-28
Identity = 113/299 (37.79%), Postives = 154/299 (51.51%), Query Frame = 0


Query: 24  QMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAIRSEPPGTAAVA---------A 83
           ++ L+ LR+E+L++E++RQRFL ++AR   +L++ E+AIR    G A  A          
Sbjct: 76  EIELMRLREEKLLVEVERQRFLKEEARRELMLAEQELAIR----GAAQAAGYSFREQRWG 135

Query: 84  ASASAVAPSFNDGE------VLEADKTEERVVL-------------------EKPNLNAL 143
            S SA AP     E      +  +D+   R V                    +KP     
Sbjct: 136 TSFSAAAPVVRSHEWQHMEQLKSSDRRGFRAVAVPLLPPPPPPRLPPFTADDKKPQRQLQ 195

Query: 144 GQKRKD---VQEKHDPNVLGQKRKAETPLLSTNDHIQPFDKVK----EWRCALCRVTVRN 203
            Q  K    + EK DP +  +KRKAE PL    D +QP    K    EW CALCRVTV +
Sbjct: 196 VQAEKSELIILEKPDPELFREKRKAEAPLALDIDDVQPSGVKKNPKDEWSCALCRVTVSS 255

Query: 204 EGSFKQHLRGKKHKHREEDRLRTRKASNVSRDMHEQLPNKRRKLSSGSAGAKEHESKVGR 263
           E +F QHL+GKKH+ R+E  LR +KASNVS+     +  KRRK+ SGSAGA+    K  +
Sbjct: 256 ERTFDQHLQGKKHQ-RKEAGLRAQKASNVSQAAPMPVLKKRRKM-SGSAGAE----KELK 315

Query: 264 TLQCDKTGLNATIPNFMKPYATKDKQHKFKFWCEKCKVGANTTNNMFGHLNGKKHRANH 282
           + QC+KTG                   +FKFWC+ CKVGA  T  M  HLNGK+H+A +
Sbjct: 316 SSQCEKTG-----------------NKEFKFWCKICKVGAQATEVMEAHLNGKRHKARN 347

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BLAST of Sed0023941.1 vs. ExPASy TrEMBL
Match: A0A1S3BUI4 (hepatoma-derived growth factor-related protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493667 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-22
Identity = 112/351 (31.91%), Postives = 163/351 (46.44%), Query Frame = 0


Query: 3   TKIMTMLNLIDPNDAVGKHLHQMALILLRQEELVMEIQRQRFLSQKARSHPILSQPEVAI 62
           T I+T+     PN+   +   +M L+ LR+E+L+ EI+R+RFL ++AR    L + E+AI
Sbjct: 65  TNIVTLRQPFVPNE---ERHWEMELMRLREEKLMGEIERERFLKEEARRELRLFEREIAI 124

Query: 63  RSEPPGTAA---------VAAASASAVAP-----------SFNDGEVLEADKTEERVVL- 122
           R   P             V   S++  AP           ++++   +E  KT  R+   
Sbjct: 125 RGLTPSAVGYPFQQPQQWVGPPSSAVAAPCPSPLPAVPVHAYHEWHRMEQVKTSGRLGFG 184

Query: 123 ----------------EKPNLNALGQKRKDVQEKHDPNVLGQKRKAETPLLSTNDHIQPF 182
                           ++P +       +++ EK   N L +KRKAET   ST   +   
Sbjct: 185 AVSLRPRIQPLMVEDKKEPKVTKEAASERELIEKPVRNALREKRKAETTSPSTK--VIKL 244

Query: 183 DKVK-----EWRCALCRVTVRNEGSFKQHLRGKKHKHREEDRLRTRKASNVSRDMHEQLP 242
             VK     EW CALC+V+  NE  F +HLRGKKH  R+E  LR RK S VS+   E LP
Sbjct: 245 SLVKKTSQAEWSCALCKVSTANEIGFNEHLRGKKHM-RKEASLRARKESKVSQAAAEPLP 304

Query: 243 NKRRK--------LSSGSAGAKEHESKVGRTLQCDKT----GLNATIPNFMKPYATKDKQ 284
            KRRK           G+ G ++  +K G T   +KT     +NA IP F K    ++ +
Sbjct: 305 KKRRKPWQAMAAAAGGGAEGKEKETTKDGETHVGEKTEGSVDMNALIPYFPKVGDKEENK 364

The following BLAST results are available for this feature:

BLAST of Sed0023941.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536654.1	2.3e-36	41.67	uncharacterized protein LOC111797967 [Cucurbita pepo subsp. pepo]	[more]
XP_022969583.1	7.5e-35	42.11	uncharacterized protein LOC111468562 [Cucurbita maxima]	[more]
XP_022937456.1	1.8e-33	40.68	uncharacterized protein LOC111443862 [Cucurbita moschata] >KAG7020828.1 hypothet...	[more]
KAG6586051.1	4.7e-29	40.00	Signal recognition particle receptor subunit alpha-like protein, partial [Cucurb...	[more]
XP_038890955.1	1.0e-28	36.42	uncharacterized protein LOC120080381 isoform X2 [Benincasa hispida]	[more]

BLAST of Sed0023941.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023941.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1E4	3.6e-35	42.11	uncharacterized protein LOC111468562 OS=Cucurbita maxima OX=3661 GN=LOC111468562...	[more]
A0A6J1FAE1	8.9e-34	40.68	uncharacterized protein LOC111443862 OS=Cucurbita moschata OX=3662 GN=LOC1114438...	[more]
A0A0A0LJ38	2.5e-28	34.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035540 PE=4 SV=1	[more]
A0A6J1E048	4.3e-28	37.79	uncharacterized protein LOC111024695 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A1S3BUI4	1.6e-22	31.91	hepatoma-derived growth factor-related protein 2-like isoform X2 OS=Cucumis melo...	[more]

BLAST of Sed0023941.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 250..283 e-value: 1.4 score: 10.9 coord: 148..182 e-value: 4.5E-5 score: 32.8
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 239..283 e-value: 3.5E-5 score: 25.3 coord: 127..181 e-value: 2.9E-8 score: 35.1
None	No IPR available	PFAM	PF12874	zf-met	coord: 253..277 e-value: 0.0048 score: 17.2 coord: 151..175 e-value: 9.8E-9 score: 35.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..221
None	No IPR available	PANTHER	PTHR47487	OS06G0651300 PROTEIN-RELATED	coord: 30..282
None	No IPR available	PANTHER	PTHR47487:SF8	OS06G0651300 PROTEIN	coord: 30..282
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 153..175
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 248..281
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 147..180

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0023941	Sed0023941	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023941.1-five_prime_utr	Sed0023941.1-five_prime_utr-LG03:46196245..46196405	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023941.1-exon	Sed0023941.1-exon-LG03:46196245..46196708	exon
Sed0023941.1-exon	Sed0023941.1-exon-LG03:46197316..46198163	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023941.1-cds	Sed0023941.1-cds-LG03:46196406..46196708	CDS
Sed0023941.1-cds	Sed0023941.1-cds-LG03:46197316..46197864	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023941.1-three_prime_utr	Sed0023941.1-three_prime_utr-LG03:46197865..46198163	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0023941.1	Sed0023941.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding