Sed0023556.3 (mRNA) Chayote v1

Overview


Name	Sed0023556.3
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Sec-independent protein translocase protein TatB-like
Location	LG05: 3395937 .. 3398567 (-)
Sequence length	1359
RNA-Seq Expression	Sed0023556.3
Synteny	Sed0023556.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAAAGATCTAATGCCCGCAAGGGATGGTGCGATGGTTGAAGGCTTGGGCTTTTGAAGGTGTGCTCCCTTCAAGGTCTTAGGTTCGAGACTCACCCGTGTGACATTAATTTGTAGATATCTTTCGTGTCTCCATTCCTTCGATATCTCCCGGTGCCTTGCCTATGTACGGGCTTAGTTATCCGGGTAGAGCAAAACTCCGATTTTCTAGTTTAAAAGAATTGTTACAAGATCTAATAGATTTAAGCCGTGAATAGAGTCTTGACTTCCAAGTTCTTATGAAAAGGGCCAAAGGATCTTCCGGTGATAGCAAGAATGGCTGGAAGGATGGCGGGCAGAGCAGTTGGATATGTTCAGGTAGCTCGAGGTCAGTTCGACTCTGTCATGCAACAAACCCAAGCTCGCCAGGTATTTCTCATTTAGTTTAACTAACGACTAGTAAATTCTCTGGTCACGTTGGTGAAGGTTCAGCAGCTCTACCATTGTCTTTTGGAAACTCAGTTGTATATAGGGCGTTTTAAAGTTATGTTTTAGGCAAATAACTACGTATTTAGTTATGGTTGAATTAGAAACTTGTTAGAGGTGATCAAATAATACCTTTTTTTGTAAGGAATTGAAATTTATTGATCAAAGAGGCAGATACAAGCCCAATTTACGGGCAAACGGCAAGAACATTAAACTGTTTTATTGGCAATCTTTTGGAGCGTATTAGGATATACGGCATAGGCCTACCGAATACCTGATTTCCAAAATAGGTTTACATTCTCGTGAAGTTTAGTGTTTCGTCATGACTACAAAGAATTAGATTGAACCAGCTGCAACATATTTGGACAATTGTTTAGGCGATTGAACAACTATCATGGTTGGCCTAGTATAGTTACATAAATAGGGCCTTAGGGAAATAAGTGAGATGTCTTCCATCCATAGCAGCCACCTATTTATAATTTAATATCCTACTTGTAGGGTCAGGCAGTTGACTGGTGAGATTACTCGAGCTGGCCTAACACTCACCAATATAAGAAAAATAAAATAAGGAGATTGAACTTGTTTTATGTTGCAGTCCTTTAACATGATTCCCTCTTTGCAGGTTCACAAGGAGTTGCAAGACACTATGGCCCAACTTGATGCTATTCGTCATGAAATTCGAAGTATATCAATCTTGAATCCTGGGCCAATGACTCGAAGGTTTGTGGACGATCCTGAGCTCAAAGAAGCTGATAGTGGTGTAACTAGTACGTGATATGTATCTCTACTGCTAATTTTCACAAGAGATCCTAATTTTTGTAATTGTTCTTTACTCACCCATTGGGAATGCAGACGATTCAGCAAAAGAAGAACCTACTGTGGAGACTACACCAGCAGCTGAGAAGGCTACACCAGCAGCTAGCATTCTCAAGGTTCTTATTAATTGTTGTATATCTTAATGGACCTTCTTTACTCTACAAATTTAAGCCATTTCAATGGATCTGCACTTTTCTTCAGGTTGCAAGTTCACAACTATCAAATGAGCACAGCCGAGCAACTACCTTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGATCGTCAACCTCATTTCCAATTGCTGGTACAGACGTCGAAAATGATGAACTTGGACTTCCTACTGTTTTACCTGTATCTGCTGAAGATACCGGGATGTTACCTAAACGCCCAGGTACGTTTTCTGTTATTGAATCACTGCCAGTGTTAAAATCCTGACTTAGGAGGTTAATGCACTTGGAAGGAAGACAATAGTTGATATGATGTTAGATGGGGATGGATGCAGGTGCCCCCGAATATGTAGTGGGACAAAACTCTGCTTATAAAAAAAATGGTGATATTAGATGAGGTATGGATGGGTGGGGACACCAATTATACCGGATAACCAAGGTTGCTTGCAACCATCATGTAGAATTGCTCTCGACGACGCACGTGCATTAACTTTTCATTCAATTATTATTCTAAACTAAATTGACGTTAGTTAATCCGGGGAAACTTGTGTTTAAGGCATATCGTACTGTAAATGTCAGCCACTTTGCTATTAGATTTGTGTTCTGTCTACTGACGACACTTACGAGAGCTTTCAATTTCTTTGCAGAGGAGTTTAAAGGCTCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAGGTGGCTCACAATGCAAAAGAATTTTTCTCACATCATCAAAATCAAATGAAACAGGAACAAGAATGACAACTTCATGAGCATCATTTTGTTGCATCATATCATAGCATTGCTAAATGGCCTATAAATGAAGTTCATACGGCTCAAAATGCGACTCCTCCAGGTATTACTCCGACTTCATATGTGTCATTTATGTAAGCTAATGAATTACTTAGAATGTTACACTATGAAGGTGTACTTATGAAAGTATATTTATTAGTTACTTTTGCAAGTGAGAAAGAAATAGGGGAAAAGAAACTCGTATTCTGTCCATACTTATTGATCTGTGCAGCTTCCCTTTATATTATTAAAGGGAACTCATCTGCTCTAATAACTCAATTGTTATCACTGGTGTTTATCAGTTATGTACAGAAAGCATGTGTGATGTTGCTTGTTACTTAGGTTTATGTTTTCAATGACGAGAATACTCTCCGTGATGGGAGA

mRNA sequence

GTTAAAAGATCTAATGCCCGCAAGGGATGGTGCGATGGTTGAAGGCTTGGGCTTTTGAAGGTGTGCTCCCTTCAAGGTCTTAGGTTCGAGACTCACCCGTGTGACATTAATTTGTAGATATCTTTCGTGTCTCCATTCCTTCGATATCTCCCGGTGCCTTGCCTATGTACGGGCTTAGTTATCCGGGTAGAGCAAAACTCCGATTTTCTAGTTTAAAAGAATTGTTACAAGATCTAATAGATTTAAGCCGTGAATAGAGTCTTGACTTCCAAGTTCTTATGAAAAGGGCCAAAGGATCTTCCGGTGATAGCAAGAATGGCTGGAAGGATGGCGGGCAGAGCAGTTGGATATGTTCAGGTAGCTCGAGGTCAGTTCGACTCTGTCATGCAACAAACCCAAGCTCGCCAGGTTCACAAGGAGTTGCAAGACACTATGGCCCAACTTGATGCTATTCGTCATGAAATTCGAAGTATATCAATCTTGAATCCTGGGCCAATGACTCGAAGGTTTGTGGACGATCCTGAGCTCAAAGAAGCTGATAGTGGTGTAACTAACGATTCAGCAAAAGAAGAACCTACTGTGGAGACTACACCAGCAGCTGAGAAGGCTACACCAGCAGCTAGCATTCTCAAGGTTGCAAGTTCACAACTATCAAATGAGCACAGCCGAGCAACTACCTTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGATCGTCAACCTCATTTCCAATTGCTGGTACAGACGTCGAAAATGATGAACTTGGACTTCCTACTGTTTTACCTGTATCTGCTGAAGATACCGGGATGTTACCTAAACGCCCAGAGGAGTTTAAAGGCTCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAGGTGGCTCACAATGCAAAAGAATTTTTCTCACATCATCAAAATCAAATGAAACAGGAACAAGAATGACAACTTCATGAGCATCATTTTGTTGCATCATATCATAGCATTGCTAAATGGCCTATAAATGAAGTTCATACGGCTCAAAATGCGACTCCTCCAGGTATTACTCCGACTTCATATGTGTCATTTATGTAAGCTAATGAATTACTTAGAATGTTACACTATGAAGGTGTACTTATGAAAGTATATTTATTAGTTACTTTTGCAAGTGAGAAAGAAATAGGGGAAAAGAAACTCGTATTCTGTCCATACTTATTGATCTGTGCAGCTTCCCTTTATATTATTAAAGGGAACTCATCTGCTCTAATAACTCAATTGTTATCACTGGTGTTTATCAGTTATGTACAGAAAGCATGTGTGATGTTGCTTGTTACTTAGGTTTATGTTTTCAATGACGAGAATACTCTCCGTGATGGGAGA

Coding sequence (CDS)

ATGGCTGGAAGGATGGCGGGCAGAGCAGTTGGATATGTTCAGGTAGCTCGAGGTCAGTTCGACTCTGTCATGCAACAAACCCAAGCTCGCCAGGTTCACAAGGAGTTGCAAGACACTATGGCCCAACTTGATGCTATTCGTCATGAAATTCGAAGTATATCAATCTTGAATCCTGGGCCAATGACTCGAAGGTTTGTGGACGATCCTGAGCTCAAAGAAGCTGATAGTGGTGTAACTAACGATTCAGCAAAAGAAGAACCTACTGTGGAGACTACACCAGCAGCTGAGAAGGCTACACCAGCAGCTAGCATTCTCAAGGTTGCAAGTTCACAACTATCAAATGAGCACAGCCGAGCAACTACCTTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGATCGTCAACCTCATTTCCAATTGCTGGTACAGACGTCGAAAATGATGAACTTGGACTTCCTACTGTTTTACCTGTATCTGCTGAAGATACCGGGATGTTACCTAAACGCCCAGAGGAGTTTAAAGGCTCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAGGTGGCTCACAATGCAAAAGAATTTTTCTCACATCATCAAAATCAAATGAAACAGGAACAAGAATGA

Protein sequence

MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVENDELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE

Homology

[Close]

BLAST of Sed0023556.3 vs. NCBI nr
Match: XP_004152379.1 (uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654831.1 uncharacterized protein LOC101219447 [Cucumis sativus] >XP_031741819.1 uncharacterized protein LOC101219447 [Cucumis sativus] >KGN50299.1 hypothetical protein Csa_000431 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 4.5e-85
Identity = 177/211 (83.89%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGRMAGRA+GYVQ+ARGQFDS+M+QT AR+VHKELQDT+AQLDAIRHEIRSISILNPGP
Sbjct: 31  MAGRMAGRAIGYVQLARGQFDSMMEQTNARKVHKELQDTLAQLDAIRHEIRSISILNPGP 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK ADSGVT++SA+E+PTVETTP AEK  PAASILKVA+SQ+SNEHSRAT
Sbjct: 91  LTQRLVDNPELKAADSGVTSNSAEEKPTVETTPVAEKTAPAASILKVATSQISNEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFARLAESP IKNGSS S PI  TDVE  NDE GLP VLPVSAE+TG+LPKRPEEFKGSD
Sbjct: 151 TFARLAESPNIKNGSSASLPIT-TDVEKLNDEFGLP-VLPVSAENTGLLPKRPEEFKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVAHNAKEFFS HQ+QMKQEQE
Sbjct: 211 IMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 239

[Close]

BLAST of Sed0023556.3 vs. NCBI nr
Match: XP_023551431.1 (uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo] >XP_023551433.1 uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.4e-84
Identity = 174/211 (82.46%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGR AG+A+GYVQ+ARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSIS LNPG 
Sbjct: 31  MAGRRAGKAIGYVQLARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISFLNPGT 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK ADSGVT+DSAKE+P+VE TP AE  TPAA+ILKVA+SQ+S EHSRAT
Sbjct: 91  LTQRLVDNPELKAADSGVTSDSAKEKPSVEITPTAEGTTPAANILKVATSQISIEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFA+LAESPTI+NGSS SFP A TDVE  NDELG+P+VLPVSAE+ GMLPKRPEE KGSD
Sbjct: 151 TFAKLAESPTIRNGSSASFP-AATDVEMPNDELGVPSVLPVSAENAGMLPKRPEELKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAV+EAEVAH+AKEFFSHHQ QMKQEQE
Sbjct: 211 IMLEAVMEAEVAHSAKEFFSHHQIQMKQEQE 240

[Close]

BLAST of Sed0023556.3 vs. NCBI nr
Match: XP_022922242.1 (uncharacterized protein LOC111430283 [Cucurbita moschata] >XP_022922243.1 uncharacterized protein LOC111430283 [Cucurbita moschata])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 174/211 (82.46%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGR AG+A+GYVQ+ARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSIS LNPG 
Sbjct: 31  MAGRRAGKAIGYVQLARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISFLNPGT 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK ADSGVT+DSAKE+P+VE TP AE  TPAA+ILKVA+SQ+S EHSRAT
Sbjct: 91  LTQRLVDNPELKAADSGVTSDSAKEKPSVEITPTAEGTTPAANILKVATSQISIEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFA+LAESPTI+NGSS SFP+A TDVE  NDELG+P+VLPVSAE+ GMLPKRPEE KGSD
Sbjct: 151 TFAKLAESPTIRNGSSASFPVA-TDVEKPNDELGVPSVLPVSAENAGMLPKRPEELKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVA++AKEFFSHHQ QMKQEQE
Sbjct: 211 IMLEAVLEAEVANSAKEFFSHHQIQMKQEQE 240

[Close]

BLAST of Sed0023556.3 vs. NCBI nr
Match: XP_008436983.1 (PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436984.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436985.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436986.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >ADN34293.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 175/211 (82.94%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGRMAGRA+GYVQ+ARGQFDSVM+QT ARQVHKELQDT+AQLDAIRHEIRSISILNPGP
Sbjct: 31  MAGRMAGRAIGYVQLARGQFDSVMEQTHARQVHKELQDTLAQLDAIRHEIRSISILNPGP 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK A SGVT++SA+E+PTVETTP AEK    ASILKVA+SQ+SNEHSRAT
Sbjct: 91  LTQRLVDNPELKAAASGVTSNSAEEKPTVETTPVAEKTAAVASILKVATSQISNEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFARLAESP IKNGSS S PI  TDVE  NDE GLP VLPVSAE+TG+LPKRPEEFKGSD
Sbjct: 151 TFARLAESPNIKNGSSASLPIT-TDVEKLNDEFGLP-VLPVSAENTGLLPKRPEEFKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVAHNAKEFFS  Q+QMKQEQE
Sbjct: 211 IMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

[Close]

BLAST of Sed0023556.3 vs. NCBI nr
Match: KAA0043466.1 (sec-independent protein translocase protein TatB-like [Cucumis melo var. makuwa])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 175/211 (82.94%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGRMAGRA+GYVQ+ARGQFDSVM+QT ARQVHKELQDT+AQLDAIRHEIRSISILNPGP
Sbjct: 31  MAGRMAGRAIGYVQLARGQFDSVMEQTHARQVHKELQDTLAQLDAIRHEIRSISILNPGP 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK A SGVT++SA+E+PTVETTP AEK   AASILKVA+SQ+SNEH RAT
Sbjct: 91  LTQRLVDNPELKAAASGVTSNSAEEKPTVETTPVAEKTAAAASILKVATSQISNEHGRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFARLAESP IKNGSS S PI  TDVE  NDE GLP VLPVSAE+TG+LPKRPEEFKGSD
Sbjct: 151 TFARLAESPNIKNGSSASLPIT-TDVEKLNDEFGLP-VLPVSAENTGLLPKRPEEFKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVAHNAKEFFS  Q+QMKQEQE
Sbjct: 211 IMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

[Close]

BLAST of Sed0023556.3 vs. ExPASy TrEMBL
Match: A0A0A0KN15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166430 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.2e-85
Identity = 177/211 (83.89%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGRMAGRA+GYVQ+ARGQFDS+M+QT AR+VHKELQDT+AQLDAIRHEIRSISILNPGP
Sbjct: 31  MAGRMAGRAIGYVQLARGQFDSMMEQTNARKVHKELQDTLAQLDAIRHEIRSISILNPGP 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK ADSGVT++SA+E+PTVETTP AEK  PAASILKVA+SQ+SNEHSRAT
Sbjct: 91  LTQRLVDNPELKAADSGVTSNSAEEKPTVETTPVAEKTAPAASILKVATSQISNEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFARLAESP IKNGSS S PI  TDVE  NDE GLP VLPVSAE+TG+LPKRPEEFKGSD
Sbjct: 151 TFARLAESPNIKNGSSASLPIT-TDVEKLNDEFGLP-VLPVSAENTGLLPKRPEEFKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVAHNAKEFFS HQ+QMKQEQE
Sbjct: 211 IMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 239

[Close]

BLAST of Sed0023556.3 vs. ExPASy TrEMBL
Match: A0A6J1E2P5 (uncharacterized protein LOC111430283 OS=Cucurbita moschata OX=3662 GN=LOC111430283 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.3e-84
Identity = 174/211 (82.46%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGR AG+A+GYVQ+ARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSIS LNPG 
Sbjct: 31  MAGRRAGKAIGYVQLARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISFLNPGT 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK ADSGVT+DSAKE+P+VE TP AE  TPAA+ILKVA+SQ+S EHSRAT
Sbjct: 91  LTQRLVDNPELKAADSGVTSDSAKEKPSVEITPTAEGTTPAANILKVATSQISIEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFA+LAESPTI+NGSS SFP+A TDVE  NDELG+P+VLPVSAE+ GMLPKRPEE KGSD
Sbjct: 151 TFAKLAESPTIRNGSSASFPVA-TDVEKPNDELGVPSVLPVSAENAGMLPKRPEELKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVA++AKEFFSHHQ QMKQEQE
Sbjct: 211 IMLEAVLEAEVANSAKEFFSHHQIQMKQEQE 240

[Close]

BLAST of Sed0023556.3 vs. ExPASy TrEMBL
Match: A0A1S3ATI2 (sec-independent protein translocase protein TatB OS=Cucumis melo OX=3656 GN=LOC103482550 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.9e-83
Identity = 175/211 (82.94%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGRMAGRA+GYVQ+ARGQFDSVM+QT ARQVHKELQDT+AQLDAIRHEIRSISILNPGP
Sbjct: 31  MAGRMAGRAIGYVQLARGQFDSVMEQTHARQVHKELQDTLAQLDAIRHEIRSISILNPGP 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK A SGVT++SA+E+PTVETTP AEK    ASILKVA+SQ+SNEHSRAT
Sbjct: 91  LTQRLVDNPELKAAASGVTSNSAEEKPTVETTPVAEKTAAVASILKVATSQISNEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFARLAESP IKNGSS S PI  TDVE  NDE GLP VLPVSAE+TG+LPKRPEEFKGSD
Sbjct: 151 TFARLAESPNIKNGSSASLPIT-TDVEKLNDEFGLP-VLPVSAENTGLLPKRPEEFKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVAHNAKEFFS  Q+QMKQEQE
Sbjct: 211 IMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

[Close]

BLAST of Sed0023556.3 vs. ExPASy TrEMBL
Match: A0A5A7TN47 (Sec-independent protein translocase protein TatB-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00030 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.9e-83
Identity = 175/211 (82.94%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGRMAGRA+GYVQ+ARGQFDSVM+QT ARQVHKELQDT+AQLDAIRHEIRSISILNPGP
Sbjct: 31  MAGRMAGRAIGYVQLARGQFDSVMEQTHARQVHKELQDTLAQLDAIRHEIRSISILNPGP 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK A SGVT++SA+E+PTVETTP AEK   AASILKVA+SQ+SNEH RAT
Sbjct: 91  LTQRLVDNPELKAAASGVTSNSAEEKPTVETTPVAEKTAAAASILKVATSQISNEHGRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFARLAESP IKNGSS S PI  TDVE  NDE GLP VLPVSAE+TG+LPKRPEEFKGSD
Sbjct: 151 TFARLAESPNIKNGSSASLPIT-TDVEKLNDEFGLP-VLPVSAENTGLLPKRPEEFKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVAHNAKEFFS  Q+QMKQEQE
Sbjct: 211 IMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

[Close]

BLAST of Sed0023556.3 vs. ExPASy TrEMBL
Match: E5GCU4 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.9e-83
Identity = 175/211 (82.94%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGP 60
           MAGRMAGRA+GYVQ+ARGQFDSVM+QT ARQVHKELQDT+AQLDAIRHEIRSISILNPGP
Sbjct: 31  MAGRMAGRAIGYVQLARGQFDSVMEQTHARQVHKELQDTLAQLDAIRHEIRSISILNPGP 90

Query: 61  MTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRAT 120
           +T+R VD+PELK A SGVT++SA+E+PTVETTP AEK    ASILKVA+SQ+SNEHSRAT
Sbjct: 91  LTQRLVDNPELKAAASGVTSNSAEEKPTVETTPVAEKTAAVASILKVATSQISNEHSRAT 150

Query: 121 TFARLAESPTIKNGSSTSFPIAGTDVE--NDELGLPTVLPVSAEDTGMLPKRPEEFKGSD 180
           TFARLAESP IKNGSS S PI  TDVE  NDE GLP VLPVSAE+TG+LPKRPEEFKGSD
Sbjct: 151 TFARLAESPNIKNGSSASLPIT-TDVEKLNDEFGLP-VLPVSAENTGLLPKRPEEFKGSD 210

Query: 181 IMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE 210
           IMLEAVLEAEVAHNAKEFFS  Q+QMKQEQE
Sbjct: 211 IMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

[Close]

BLAST of Sed0023556.3 vs. TAIR 10
Match: AT5G43680.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 83/201 (41.29%), Postives = 113/201 (56.22%), Query Frame = 0


Query: 3   GRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGPMT 62
           GR+ GRA+GY+ +ARG  D VM+Q Q +++ KE+QD  AQ+DAI H  R  S+ +  P+T
Sbjct: 33  GRLFGRAIGYINMARGHLDGVMKQPQMQEISKEVQDLRAQVDAISHGAR-FSLFDSSPLT 92

Query: 63  RRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRATTF 122
           RR VD+ + +E     TN         E     +  T A      +SS   N H++AT+F
Sbjct: 93  RR-VDNQKTQEPSPSTTNGIVTSVNVEEKQKPVDHYTKAQE-FSGSSSASVNLHAQATSF 152

Query: 123 ARLAESPTIKNGSSTSFPIAGTDVENDELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLE 182
           ARL+E+   K  S  S                 VLPVSAE   +LP+R E  +GSD+MLE
Sbjct: 153 ARLSETVNGKTHSLNSD--------------SPVLPVSAEMAKLLPQRKESARGSDLMLE 212

Query: 183 AVLEAEVAHNAKEFFSHHQNQ 204
           AVLEAEVAH AK FF+  + +
Sbjct: 213 AVLEAEVAHKAKSFFAQAEKE 216

[Close]

BLAST of Sed0023556.3 vs. TAIR 10
Match: AT5G43680.2 (unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 83/201 (41.29%), Postives = 113/201 (56.22%), Query Frame = 0


Query: 3   GRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGPMT 62
           GR+ GRA+GY+ +ARG  D VM+Q Q +++ KE+QD  AQ+DAI H  R  S+ +  P+T
Sbjct: 33  GRLFGRAIGYINMARGHLDGVMKQPQMQEISKEVQDLRAQVDAISHGAR-FSLFDSSPLT 92

Query: 63  RRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRATTF 122
           RR VD+ + +E     TN         E     +  T A      +SS   N H++AT+F
Sbjct: 93  RR-VDNQKTQEPSPSTTNGIVTSVNVEEKQKPVDHYTKAQE-FSGSSSASVNLHAQATSF 152

Query: 123 ARLAESPTIKNGSSTSFPIAGTDVENDELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLE 182
           ARL+E+   K  S  S                 VLPVSAE   +LP+R E  +GSD+MLE
Sbjct: 153 ARLSETVNGKTHSLNSD--------------SPVLPVSAEMAKLLPQRKESARGSDLMLE 212

Query: 183 AVLEAEVAHNAKEFFSHHQNQ 204
           AVLEAEVAH AK FF+  + +
Sbjct: 213 AVLEAEVAHKAKSFFAQAEKE 216

The following BLAST results are available for this feature:

BLAST of Sed0023556.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152379.1	4.5e-85	83.89	uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654831.1 uncharact...	[more]
XP_023551431.1	6.4e-84	82.46	uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo] >XP_023551433....	[more]
XP_022922242.1	1.1e-83	82.46	uncharacterized protein LOC111430283 [Cucurbita moschata] >XP_022922243.1 unchar...	[more]
XP_008436983.1	1.2e-82	82.94	PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_0...	[more]
KAA0043466.1	1.2e-82	82.94	sec-independent protein translocase protein TatB-like [Cucumis melo var. makuwa]	[more]

BLAST of Sed0023556.3 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023556.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN15	2.2e-85	83.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166430 PE=4 SV=1	[more]
A0A6J1E2P5	5.3e-84	82.46	uncharacterized protein LOC111430283 OS=Cucurbita moschata OX=3662 GN=LOC1114302...	[more]
A0A1S3ATI2	5.9e-83	82.94	sec-independent protein translocase protein TatB OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7TN47	5.9e-83	82.94	Sec-independent protein translocase protein TatB-like OS=Cucumis melo var. makuw...	[more]
E5GCU4	5.9e-83	82.94	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Sed0023556.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43680.1	1.3e-26	41.29	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G43680.2	1.3e-26	41.29	unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 29..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..96
None	No IPR available	PANTHER	PTHR35512	OS11G0550900 PROTEIN	coord: 1..207

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0023556	Sed0023556	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023556.3-three_prime_utr	Sed0023556.3-three_prime_utr-LG05:3395937..3396350	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023556.3-exon	Sed0023556.3-exon-LG05:3395937..3396466	exon
Sed0023556.3-exon	Sed0023556.3-exon-LG05:3396890..3397085	exon
Sed0023556.3-exon	Sed0023556.3-exon-LG05:3397171..3397250	exon
Sed0023556.3-exon	Sed0023556.3-exon-LG05:3397336..3397480	exon
Sed0023556.3-exon	Sed0023556.3-exon-LG05:3398160..3398567	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023556.3-cds	Sed0023556.3-cds-LG05:3396351..3396466	CDS
Sed0023556.3-cds	Sed0023556.3-cds-LG05:3396890..3397085	CDS
Sed0023556.3-cds	Sed0023556.3-cds-LG05:3397171..3397250	CDS
Sed0023556.3-cds	Sed0023556.3-cds-LG05:3397336..3397480	CDS
Sed0023556.3-cds	Sed0023556.3-cds-LG05:3398160..3398252	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023556.3-five_prime_utr	Sed0023556.3-five_prime_utr-LG05:3398253..3398567	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0023556.3	Sed0023556.3-protein	polypeptide