Sed0023556 (gene) Chayote v1

Overview


Name	Sed0023556
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Sec-independent protein translocase protein TatB-like
Location	LG05: 3395937 .. 3399305 (-)
RNA-Seq Expression	Sed0023556
Synteny	Sed0023556

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGGTTCTGCGCGCCTTCTCCTTCTCCATCGTCACGCCGTCGCCGATCCCTTTTGCCGCCTCTCACCGTTCAGCGCCGTCGCCTCCGCCGTCTTCGCCGCCGCTCCGTCTTAGCACTTTGAACTGGTTTTTCCACTCTATTGTTACCGGTAATCTACCGATCTCCATTTTATCTCACCGGCGCTCAACGCCGTCACTGAAAACGAATTTATTTATCATCTCTCATTCTCCATCGGTTTCTCAACTGAACAAACAAACAAACAATTAGAAACTCGCAGATCTGTTCATCTTCAAACCTTACTCCAAGGTTAAAGCCTCGTTAATAACTTCTATCAGTCGCATCTTTCATTTTTCTTCAATGTTGATTTTGTTTTCGATTTGGTGTTCGATTATATTCGCAACATTTCCTTTGCCTTTGTCTTGCTTTGCATTGAAGATATTTCGAGATTTCGTTTGATTAGTGAAGACAGCATTTTGTGTTGAACCTTCATGTTGGCTTGTTGAACCCTAATTTTAGATAATCGTGCAGTTAATCGATCAGCGAGGGCTGAATTAAGTGAAAGTTATCGAATCTGGGATTATTCTGAATCTCCAGGCCTGGCTTGATTGCTATTCTGAGTTCCTGTTAGAGACACTAGAAACTGAAATGTTGGGCATTTCATATGGAGAACTCTTCCTCCTTATTGGAGCTACTGCTGCATTCATTGGTAATTACTGCATTACCCTTTCTCAATTGTTAAAAGATCTAATGCCCGCAAGGGATGGTGCGATGGTTGAAGGCTTGGGCTTTTGAAGGTGTGCTCCCTTCAAGGTCTTAGGTTCGAGACTCACCCGTGTGACATTAATTTGTAGATATCTTTCGTGTCTCCATTCCTTCGATATCTCCCGGTGCCTTGCCTATGTACGGGCTTAGTTATCCGGGTAGAGCAAAACTCCGATTTTCTAGTTTAAAAGAATTGTTACAAGATCTAATAGATTTAAGCCGTGAATAGAGTCTTGACTTCCAAGTTCTTATGAAAAGGGCCAAAGGATCTTCCGGTGATAGCAAGAATGGCTGGAAGGATGGCGGGCAGAGCAGTTGGATATGTTCAGGTAGCTCGAGGTCAGTTCGACTCTGTCATGCAACAAACCCAAGCTCGCCAGGTATTTCTCATTTAGTTTAACTAACGACTAGTAAATTCTCTGGTCACGTTGGTGAAGGTTCAGCAGCTCTACCATTGTCTTTTGGAAACTCAGTTGTATATAGGGCGTTTTAAAGTTATGTTTTAGGCAAATAACTACGTATTTAGTTATGGTTGAATTAGAAACTTGTTAGAGGTGATCAAATAATACCTTTTTTTGTAAGGAATTGAAATTTATTGATCAAAGAGGCAGATACAAGCCCAATTTACGGGCAAACGGCAAGAACATTAAACTGTTTTATTGGCAATCTTTTGGAGCGTATTAGGATATACGGCATAGGCCTACCGAATACCTGATTTCCAAAATAGGTTTACATTCTCGTGAAGTTTAGTGTTTCGTCATGACTACAAAGAATTAGATTGAACCAGCTGCAACATATTTGGACAATTGTTTAGGCGATTGAACAACTATCATGGTTGGCCTAGTATAGTTACATAAATAGGGCCTTAGGGAAATAAGTGAGATGTCTTCCATCCATAGCAGCCACCTATTTATAATTTAATATCCTACTTGTAGGGTCAGGCAGTTGACTGGTGAGATTACTCGAGCTGGCCTAACACTCACCAATATAAGAAAAATAAAATAAGGAGATTGAACTTGTTTTATGTTGCAGTCCTTTAACATGATTCCCTCTTTGCAGGTTCACAAGGAGTTGCAAGACACTATGGCCCAACTTGATGCTATTCGTCATGAAATTCGAAGTATATCAATCTTGAATCCTGGGCCAATGACTCGAAGGTTTGTGGACGATCCTGAGCTCAAAGAAGCTGATAGTGGTGTAACTAGTACGTGATATGTATCTCTACTGCTAATTTTCACAAGAGATCCTAATTTTTGTAATTGTTCTTTACTCACCCATTGGGAATGCAGACGATTCAGCAAAAGAAGAACCTACTGTGGAGACTACACCAGCAGCTGAGAAGGCTACACCAGCAGCTAGCATTCTCAAGGTTCTTATTAATTGTTGTATATCTTAATGGACCTTCTTTACTCTACAAATTTAAGCCATTTCAATGGATCTGCACTTTTCTTCAGGTTGCAAGTTCACAACTATCAAATGAGCACAGCCGAGCAACTACCTTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGATCGTCAACCTCATTTCCAATTGCTGGTACAGACGTCGAAAATGATGAACTTGGACTTCCTACTGTTTTACCTGTATCTGCTGAAGATACCGGGATGTTACCTAAACGCCCAGGTACGTTTTCTGTTATTGAATCACTGCCAGTGTTAAAATCCTGACTTAGGAGGTTAATGCACTTGGAAGGAAGACAATAGTTGATATGATGTTAGATGGGGATGGATGCAGGTGCCCCCGAATATGTAGTGGGACAAAACTCTGCTTATAAAAAAAATGGTGATATTAGATGAGGTATGGATGGGTGGGGACACCAATTATACCGGATAACCAAGGTTGCTTGCAACCATCATGTAGAATTGCTCTCGACGACGCACGTGCATTAACTTTTCATTCAATTATTATTCTAAACTAAATTGACGTTAGTTAATCCGGGGAAACTTGTGTTTAAGGCATATCGTACTGTAAATGTCAGCCACTTTGCTATTAGATTTGTGTTCTGTCTACTGACGACACTTACGAGAGCTTTCAATTTCTTTGCAGAGGAGTTTAAAGGCTCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAGGTGGCTCACAATGCAAAAGAATTTTTCTCACATCATCAAAATCAAATGAAACAGGAACAAGAATGACAACTTCATGAGCATCATTTTGTTGCATCATATCATAGCATTGCTAAATGGCCTATAAATGAAGTTCATACGGCTCAAAATGCGACTCCTCCAGGTATTACTCCGACTTCATATGTGTCATTTATGTAAGCTAATGAATTACTTAGAATGTTACACTATGAAGGTGTACTTATGAAAGTATATTTATTAGTTACTTTTGCAAGTGAGAAAGAAATAGGGGAAAAGAAACTCGTATTCTGTCCATACTTATTGATCTGTGCAGCTTCCCTTTATATTATTAAAGGGAACTCATCTGCTCTAATAACTCAATTGTTATCACTGGTGTTTATCAGTTATGTACAGAAAGCATGTGTGATGTTGCTTGTTACTTAGGTTTATGTTTTCAATGACGAGAATACTCTCCGTGATGGGAGA

mRNA sequence

GTTTTTGGTTCTGCGCGCCTTCTCCTTCTCCATCGTCACGCCGTCGCCGATCCCTTTTGCCGCCTCTCACCGTTCAGCGCCGTCGCCTCCGCCGTCTTCGCCGCCGCTCCGTCTTAGCACTTTGAACTGGTTTTTCCACTCTATTGTTACCGTTAATCGATCAGCGAGGGCTGAATTAAGTGAAAGTTATCGAATCTGGGATTATTCTGAATCTCCAGGCCTGGCTTGATTGCTATTCTGAGTTCCTGTTAGAGACACTAGAAACTGAAATGTTGGGCATTTCATATGGAGAACTCTTCCTCCTTATTGGAGCTACTGCTGCATTCATTGGGCCAAAGGATCTTCCGGTGATAGCAAGAATGGCTGGAAGGATGGCGGGCAGAGCAGTTGGATATGTTCAGGTAGCTCGAGGTCAGTTCGACTCTGTCATGCAACAAACCCAAGCTCGCCAGGTTCACAAGGAGTTGCAAGACACTATGGCCCAACTTGATGCTATTCGTCATGAAATTCGAAGTATATCAATCTTGAATCCTGGGCCAATGACTCGAAGGTTTGTGGACGATCCTGAGCTCAAAGAAGCTGATAGTGGTGTAACTAACGATTCAGCAAAAGAAGAACCTACTGTGGAGACTACACCAGCAGCTGAGAAGGCTACACCAGCAGCTAGCATTCTCAAGGTTGCAAGTTCACAACTATCAAATGAGCACAGCCGAGCAACTACCTTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGATCGTCAACCTCATTTCCAATTGCTGGTACAGACGTCGAAAATGATGAACTTGGACTTCCTACTGTTTTACCTGTATCTGCTGAAGATACCGGGATGTTACCTAAACGCCCAGAGGAGTTTAAAGGCTCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAGGTGGCTCACAATGCAAAAGAATTTTTCTCACATCATCAAAATCAAATGAAACAGGAACAAGAATGACAACTTCATGAGCATCATTTTGTTGCATCATATCATAGCATTGCTAAATGGCCTATAAATGAAGTTCATACGGCTCAAAATGCGACTCCTCCAGGTATTACTCCGACTTCATATGTGTCATTTATGTAAGCTAATGAATTACTTAGAATGTTACACTATGAAGGTGTACTTATGAAAGTATATTTATTAGTTACTTTTGCAAGTGAGAAAGAAATAGGGGAAAAGAAACTCGTATTCTGTCCATACTTATTGATCTGTGCAGCTTCCCTTTATATTATTAAAGGGAACTCATCTGCTCTAATAACTCAATTGTTATCACTGGTGTTTATCAGTTATGTACAGAAAGCATGTGTGATGTTGCTTGTTACTTAGGTTTATGTTTTCAATGACGAGAATACTCTCCGTGATGGGAGA

Coding sequence (CDS)

ATGTTGGGCATTTCATATGGAGAACTCTTCCTCCTTATTGGAGCTACTGCTGCATTCATTGGGCCAAAGGATCTTCCGGTGATAGCAAGAATGGCTGGAAGGATGGCGGGCAGAGCAGTTGGATATGTTCAGGTAGCTCGAGGTCAGTTCGACTCTGTCATGCAACAAACCCAAGCTCGCCAGGTTCACAAGGAGTTGCAAGACACTATGGCCCAACTTGATGCTATTCGTCATGAAATTCGAAGTATATCAATCTTGAATCCTGGGCCAATGACTCGAAGGTTTGTGGACGATCCTGAGCTCAAAGAAGCTGATAGTGGTGTAACTAACGATTCAGCAAAAGAAGAACCTACTGTGGAGACTACACCAGCAGCTGAGAAGGCTACACCAGCAGCTAGCATTCTCAAGGTTGCAAGTTCACAACTATCAAATGAGCACAGCCGAGCAACTACCTTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGATCGTCAACCTCATTTCCAATTGCTGGTACAGACGTCGAAAATGATGAACTTGGACTTCCTACTGTTTTACCTGTATCTGCTGAAGATACCGGGATGTTACCTAAACGCCCAGAGGAGTTTAAAGGCTCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAGGTGGCTCACAATGCAAAAGAATTTTTCTCACATCATCAAAATCAAATGAAACAGGAACAAGAATGA

Protein sequence

MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVETTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVENDELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQE

Homology

[Close]

BLAST of Sed0023556 vs. NCBI nr
Match: XP_004152379.1 (uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654831.1 uncharacterized protein LOC101219447 [Cucumis sativus] >XP_031741819.1 uncharacterized protein LOC101219447 [Cucumis sativus] >KGN50299.1 hypothetical protein Csa_000431 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 1.6e-99
Identity = 202/241 (83.82%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGE+ LLIGATAA IGPKDLP+I+RMAGRMAGRA+GYVQ+ARGQFDS+M+QT AR
Sbjct: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           +VHKELQDT+AQLDAIRHEIRSISILNPGP+T+R VD+PELK ADSGVT++SA+E+PTVE
Sbjct: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
           TTP AEK  PAASILKVA+SQ+SNEHSRATTFARLAESP IKNGSS S PI  TDVE  N
Sbjct: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPIT-TDVEKLN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DE GLP VLPVSAE+TG+LPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFS HQ+QMKQEQ
Sbjct: 181 DEFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQ 239

[Close]

BLAST of Sed0023556 vs. NCBI nr
Match: XP_023551431.1 (uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo] >XP_023551433.1 uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 8.1e-99
Identity = 201/241 (83.40%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGAT AFIGPKDLP IARMAGR AG+A+GYVQ+ARGQFDSVMQQTQAR
Sbjct: 1   MLGISYGELLLLIGATVAFIGPKDLPRIARMAGRRAGKAIGYVQLARGQFDSVMQQTQAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDTMAQLDAIRHEIRSIS LNPG +T+R VD+PELK ADSGVT+DSAKE+P+VE
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISFLNPGTLTQRLVDNPELKAADSGVTSDSAKEKPSVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
            TP AE  TPAA+ILKVA+SQ+S EHSRATTFA+LAESPTI+NGSS SFP A TDVE  N
Sbjct: 121 ITPTAEGTTPAANILKVATSQISIEHSRATTFAKLAESPTIRNGSSASFP-AATDVEMPN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DELG+P+VLPVSAE+ GMLPKRPEE KGSDIMLEAV+EAEVAH+AKEFFSHHQ QMKQEQ
Sbjct: 181 DELGVPSVLPVSAENAGMLPKRPEELKGSDIMLEAVMEAEVAHSAKEFFSHHQIQMKQEQ 240

[Close]

BLAST of Sed0023556 vs. NCBI nr
Match: XP_022922242.1 (uncharacterized protein LOC111430283 [Cucurbita moschata] >XP_022922243.1 uncharacterized protein LOC111430283 [Cucurbita moschata])

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-98
Identity = 201/241 (83.40%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGAT AFIGPKDLP IARMAGR AG+A+GYVQ+ARGQFDSVMQQTQAR
Sbjct: 1   MLGISYGELLLLIGATVAFIGPKDLPRIARMAGRRAGKAIGYVQLARGQFDSVMQQTQAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDTMAQLDAIRHEIRSIS LNPG +T+R VD+PELK ADSGVT+DSAKE+P+VE
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISFLNPGTLTQRLVDNPELKAADSGVTSDSAKEKPSVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
            TP AE  TPAA+ILKVA+SQ+S EHSRATTFA+LAESPTI+NGSS SFP+A TDVE  N
Sbjct: 121 ITPTAEGTTPAANILKVATSQISIEHSRATTFAKLAESPTIRNGSSASFPVA-TDVEKPN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DELG+P+VLPVSAE+ GMLPKRPEE KGSDIMLEAVLEAEVA++AKEFFSHHQ QMKQEQ
Sbjct: 181 DELGVPSVLPVSAENAGMLPKRPEELKGSDIMLEAVLEAEVANSAKEFFSHHQIQMKQEQ 240

[Close]

BLAST of Sed0023556 vs. NCBI nr
Match: XP_008436983.1 (PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436984.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436985.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436986.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >ADN34293.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 201/241 (83.40%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGATAA IGPKDLP+I+RMAGRMAGRA+GYVQ+ARGQFDSVM+QT AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDT+AQLDAIRHEIRSISILNPGP+T+R VD+PELK A SGVT++SA+E+PTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
           TTP AEK    ASILKVA+SQ+SNEHSRATTFARLAESP IKNGSS S PI  TDVE  N
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPIT-TDVEKLN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DE GLP VLPVSAE+TG+LPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFS  Q+QMKQEQ
Sbjct: 181 DEFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSQQSQMKQEQ 239

[Close]

BLAST of Sed0023556 vs. NCBI nr
Match: KAG6579386.1 (Sec-independent protein translocase protein TatB, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016866.1 Sec-independent protein translocase protein TatB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGAT AFIGPKDLP IARMAGR AG+A+GYVQ+ARGQFDSVMQQTQAR
Sbjct: 1   MLGISYGELLLLIGATVAFIGPKDLPRIARMAGRRAGKAIGYVQLARGQFDSVMQQTQAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDTMAQLDAIRHEIRSIS LNPG +T+R VD+PELK ADSGVT+DSAKE+P+VE
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISFLNPGTLTQRLVDNPELKAADSGVTSDSAKEKPSVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
            TP AE  TPAA+I KVA+SQ+S EHSRATTFA+LAESPTI+NGSS SFP+A TDVE  N
Sbjct: 121 ITPTAEGTTPAANIPKVATSQISIEHSRATTFAKLAESPTIRNGSSASFPVA-TDVEKPN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 239
           DELG+P+VLPVSAE+ GMLPKRPEE KGSDIMLEAVLEAEVA++AKEFFSHHQ QMKQEQ
Sbjct: 181 DELGVPSVLPVSAENAGMLPKRPEELKGSDIMLEAVLEAEVANSAKEFFSHHQIQMKQEQ 239

[Close]

BLAST of Sed0023556 vs. ExPASy Swiss-Prot
Match: A4G9I1 (Sec-independent protein translocase protein TatB OS=Herminiimonas arsenicoxydans OX=204773 GN=tatB PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.4e-06
Identity = 25/74 (33.78%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 1  MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
          M+ I++ +L ++  A   FIGP+ LP +ARMAG + GRA  Y+   + +    M+  + R
Sbjct: 1  MIDIAFSKLAIIGVAALVFIGPEKLPTVARMAGTLFGRAQRYINDVKSEVSREMELDELR 60

Query: 61 QVHKELQDTMAQLD 75
          ++HK++QD    ++
Sbjct: 61 KMHKDVQDAATDVE 74

[Close]

BLAST of Sed0023556 vs. ExPASy Swiss-Prot
Match: Q0C0V9 (Sec-independent protein translocase protein TatB OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=tatB PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 23/66 (34.85%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 3  GISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQARQV 62
          GI + EL L+  A    IGPKDLP++ R  G++ G+     +  +  FD + +Q++  ++
Sbjct: 4  GIGFSELLLIGLAALIIIGPKDLPMMMRTLGQLMGKGRRMAREFQAAFDDIARQSELDEL 63

Query: 63 HKELQD 69
           KE+QD
Sbjct: 64 KKEIQD 69

[Close]

BLAST of Sed0023556 vs. ExPASy TrEMBL
Match: A0A0A0KN15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166430 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.9e-100
Identity = 202/241 (83.82%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGE+ LLIGATAA IGPKDLP+I+RMAGRMAGRA+GYVQ+ARGQFDS+M+QT AR
Sbjct: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           +VHKELQDT+AQLDAIRHEIRSISILNPGP+T+R VD+PELK ADSGVT++SA+E+PTVE
Sbjct: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
           TTP AEK  PAASILKVA+SQ+SNEHSRATTFARLAESP IKNGSS S PI  TDVE  N
Sbjct: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPIT-TDVEKLN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DE GLP VLPVSAE+TG+LPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFS HQ+QMKQEQ
Sbjct: 181 DEFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQ 239

[Close]

BLAST of Sed0023556 vs. ExPASy TrEMBL
Match: A0A6J1E2P5 (uncharacterized protein LOC111430283 OS=Cucurbita moschata OX=3662 GN=LOC111430283 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 5.1e-99
Identity = 201/241 (83.40%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGAT AFIGPKDLP IARMAGR AG+A+GYVQ+ARGQFDSVMQQTQAR
Sbjct: 1   MLGISYGELLLLIGATVAFIGPKDLPRIARMAGRRAGKAIGYVQLARGQFDSVMQQTQAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDTMAQLDAIRHEIRSIS LNPG +T+R VD+PELK ADSGVT+DSAKE+P+VE
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISFLNPGTLTQRLVDNPELKAADSGVTSDSAKEKPSVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
            TP AE  TPAA+ILKVA+SQ+S EHSRATTFA+LAESPTI+NGSS SFP+A TDVE  N
Sbjct: 121 ITPTAEGTTPAANILKVATSQISIEHSRATTFAKLAESPTIRNGSSASFPVA-TDVEKPN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DELG+P+VLPVSAE+ GMLPKRPEE KGSDIMLEAVLEAEVA++AKEFFSHHQ QMKQEQ
Sbjct: 181 DELGVPSVLPVSAENAGMLPKRPEELKGSDIMLEAVLEAEVANSAKEFFSHHQIQMKQEQ 240

[Close]

BLAST of Sed0023556 vs. ExPASy TrEMBL
Match: A0A1S3ATI2 (sec-independent protein translocase protein TatB OS=Cucumis melo OX=3656 GN=LOC103482550 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.7e-98
Identity = 201/241 (83.40%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGATAA IGPKDLP+I+RMAGRMAGRA+GYVQ+ARGQFDSVM+QT AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDT+AQLDAIRHEIRSISILNPGP+T+R VD+PELK A SGVT++SA+E+PTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
           TTP AEK    ASILKVA+SQ+SNEHSRATTFARLAESP IKNGSS S PI  TDVE  N
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPIT-TDVEKLN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DE GLP VLPVSAE+TG+LPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFS  Q+QMKQEQ
Sbjct: 181 DEFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSQQSQMKQEQ 239

[Close]

BLAST of Sed0023556 vs. ExPASy TrEMBL
Match: A0A5A7TN47 (Sec-independent protein translocase protein TatB-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00030 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.7e-98
Identity = 201/241 (83.40%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGATAA IGPKDLP+I+RMAGRMAGRA+GYVQ+ARGQFDSVM+QT AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDT+AQLDAIRHEIRSISILNPGP+T+R VD+PELK A SGVT++SA+E+PTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
           TTP AEK   AASILKVA+SQ+SNEH RATTFARLAESP IKNGSS S PI  TDVE  N
Sbjct: 121 TTPVAEKTAAAASILKVATSQISNEHGRATTFARLAESPNIKNGSSASLPIT-TDVEKLN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DE GLP VLPVSAE+TG+LPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFS  Q+QMKQEQ
Sbjct: 181 DEFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSQQSQMKQEQ 239

[Close]

BLAST of Sed0023556 vs. ExPASy TrEMBL
Match: E5GCU4 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.7e-98
Identity = 201/241 (83.40%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLGISYGEL LLIGATAA IGPKDLP+I+RMAGRMAGRA+GYVQ+ARGQFDSVM+QT AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           QVHKELQDT+AQLDAIRHEIRSISILNPGP+T+R VD+PELK A SGVT++SA+E+PTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVE--N 180
           TTP AEK    ASILKVA+SQ+SNEHSRATTFARLAESP IKNGSS S PI  TDVE  N
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPIT-TDVEKLN 180

Query: 181 DELGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQMKQEQ 240
           DE GLP VLPVSAE+TG+LPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFS  Q+QMKQEQ
Sbjct: 181 DEFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSQQSQMKQEQ 239

[Close]

BLAST of Sed0023556 vs. TAIR 10
Match: AT5G43680.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-41
Identity = 106/233 (45.49%), Postives = 141/233 (60.52%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLG+SYGEL L++GATAA +GPKDLP+IAR  GR+ GRA+GY+ +ARG  D VM+Q Q +
Sbjct: 1   MLGLSYGELLLIVGATAALVGPKDLPIIARAGGRLFGRAIGYINMARGHLDGVMKQPQMQ 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           ++ KE+QD  AQ+DAI H  R  S+ +  P+TRR VD+ + +E     TN         E
Sbjct: 61  EISKEVQDLRAQVDAISHGAR-FSLFDSSPLTRR-VDNQKTQEPSPSTTNGIVTSVNVEE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVENDE 180
                +  T A      +SS   N H++AT+FARL+E+   K  S  S            
Sbjct: 121 KQKPVDHYTKAQE-FSGSSSASVNLHAQATSFARLSETVNGKTHSLNSD----------- 180

Query: 181 LGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQ 234
                VLPVSAE   +LP+R E  +GSD+MLEAVLEAEVAH AK FF+  + +
Sbjct: 181 ---SPVLPVSAEMAKLLPQRKESARGSDLMLEAVLEAEVAHKAKSFFAQAEKE 216

[Close]

BLAST of Sed0023556 vs. TAIR 10
Match: AT5G43680.2 (unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-41
Identity = 106/233 (45.49%), Postives = 141/233 (60.52%), Query Frame = 0


Query: 1   MLGISYGELFLLIGATAAFIGPKDLPVIARMAGRMAGRAVGYVQVARGQFDSVMQQTQAR 60
           MLG+SYGEL L++GATAA +GPKDLP+IAR  GR+ GRA+GY+ +ARG  D VM+Q Q +
Sbjct: 1   MLGLSYGELLLIVGATAALVGPKDLPIIARAGGRLFGRAIGYINMARGHLDGVMKQPQMQ 60

Query: 61  QVHKELQDTMAQLDAIRHEIRSISILNPGPMTRRFVDDPELKEADSGVTNDSAKEEPTVE 120
           ++ KE+QD  AQ+DAI H  R  S+ +  P+TRR VD+ + +E     TN         E
Sbjct: 61  EISKEVQDLRAQVDAISHGAR-FSLFDSSPLTRR-VDNQKTQEPSPSTTNGIVTSVNVEE 120

Query: 121 TTPAAEKATPAASILKVASSQLSNEHSRATTFARLAESPTIKNGSSTSFPIAGTDVENDE 180
                +  T A      +SS   N H++AT+FARL+E+   K  S  S            
Sbjct: 121 KQKPVDHYTKAQE-FSGSSSASVNLHAQATSFARLSETVNGKTHSLNSD----------- 180

Query: 181 LGLPTVLPVSAEDTGMLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSHHQNQ 234
                VLPVSAE   +LP+R E  +GSD+MLEAVLEAEVAH AK FF+  + +
Sbjct: 181 ---SPVLPVSAEMAKLLPQRKESARGSDLMLEAVLEAEVAHKAKSFFAQAEKE 216

The following BLAST results are available for this feature:

BLAST of Sed0023556 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152379.1	1.6e-99	83.82	uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654831.1 uncharact...	[more]
XP_023551431.1	8.1e-99	83.40	uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo] >XP_023551433....	[more]
XP_022922242.1	1.1e-98	83.40	uncharacterized protein LOC111430283 [Cucurbita moschata] >XP_022922243.1 unchar...	[more]
XP_008436983.1	2.0e-97	83.40	PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_0...	[more]
KAG6579386.1	2.0e-97	82.92	Sec-independent protein translocase protein TatB, partial [Cucurbita argyrosperm...	[more]

BLAST of Sed0023556 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4G9I1	6.4e-06	33.78	Sec-independent protein translocase protein TatB OS=Herminiimonas arsenicoxydans...	[more]
Q0C0V9	7.8e-04	34.85	Sec-independent protein translocase protein TatB OS=Hyphomonas neptunium (strain...	[more]

BLAST of Sed0023556 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN15	7.9e-100	83.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166430 PE=4 SV=1	[more]
A0A6J1E2P5	5.1e-99	83.40	uncharacterized protein LOC111430283 OS=Cucurbita moschata OX=3662 GN=LOC1114302...	[more]
A0A1S3ATI2	9.7e-98	83.40	sec-independent protein translocase protein TatB OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7TN47	9.7e-98	83.40	Sec-independent protein translocase protein TatB-like OS=Cucumis melo var. makuw...	[more]
E5GCU4	9.7e-98	83.40	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Sed0023556 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43680.1	3.7e-41	45.49	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G43680.2	3.7e-41	45.49	unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..127
None	No IPR available	PANTHER	PTHR35512	OS11G0550900 PROTEIN	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023556.1	Sed0023556.1	mRNA
Sed0023556.2	Sed0023556.2	mRNA
Sed0023556.3	Sed0023556.3	mRNA
Sed0023556.4	Sed0023556.4	mRNA