Sed0023042.1 (mRNA) Chayote v1

Overview


Name	Sed0023042.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	4HBT domain-containing protein
Location	LG12: 4331023 .. 4333210 (+)
Sequence length	868
RNA-Seq Expression	Sed0023042.1
Synteny	Sed0023042.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGATTTTATGTAGTTGTCAAATACCCACAAATATTAAATCAACAATCCAATCCAAGATTTCACCCTCTCGAATTCTCCGATCAGAAAATCCCCAATTATGTCTACAAAAAATTCTCCGCCGTCGTCGAAGCCGGCGGTTCTGGACGCTGCGCTGGAGGCGTTGGGATTCGAGTTCGAACACGTTTCTTCAGTGGGCGTGACCGGCCGTCTTCTAGTTTCCCCAATTTGCTGCCAGGTACCTTCAATTTCCTTTAATTTCACTTTCCTCCCTCCAATATTATTATTATTATTTATAATTAATTATTCTTATTCGGAAATTGTGAAAAATAAAGCCCTTCAAAGTGTTGCACGGAGGAGTGTCGGCGTTGATAGCTGAGTCGCTTGCCAGCATGGCGGCTCACGTGGCTTCCGGCTACCGGAGGGTCGCCGGAATCCAACTCACTGTCAGCCATTTGAAGAGCGCCGCCCTCGGCGACCTCGTTTTCGCCGAAGCCGCTCCCGTCTCCCTTGGTAGAACCATTCAGGTATCATTTATGAGTAACCGTTTCGAACATGTAATCTCTTCTATTCTCAATTAGAAATATCCATTTTCCGCGCATGGCCCACCGGGACGGTGAATCCCAAGGTGGAAACACAAGGAGTGGGTGCGAGAAAAAGATTTCTCGCGAGCTAAACAGGATTGGGACAGGAATCCATTCACCATCAATCCCCACCCACCTAGTTTATATTTTATTTTTTAAAAATATATATTTTTCTCTCTTCCGGTTTAAGCTTTTAAATAAATATCGATACATATTTTTGTAAGAAAAGTCATTTATTTGAAAAATTGTTATTGAAAAAATTCTTATAAAATTAAGATTAAAAATTGTAGAAAGAAAAAAAATGGAGAAATTTTTTATGTGAAGAACTTGATCCTCGCCTATTCCTCCATAAATCCCCACCTCGATTCCTATGAAATAAAAAGATGAATTTTGCAGGAAACCCATTCTTTGGTCCCCGCCTCCTAGACAACTCTAGTGAGAATTGAGTCATTTATTTATGTTTTTATATCTAGTTTCTGTTTTTTTTTATGTAAAACATAACCTAAACATAAAGTAAGACTTAAAAGAAAATTAGTTTATTTTGAATATGGAAATAGATTTGATTCTATTCAAAATTGTTTCCTACTGCATTTAATTTTGATGTATGTGTATTTCAATAATTGTCCAATTAGGTGAGTGTTGATAATGATTATATGTCTAGACCATCATTCATTCTAATCTTTCTATCTATTTAGATCTCTTTATCTCTTGAAATATTATAAAATGTATCTTTTAGACATTCAAATATATTAATTTGATAAAATATTAAAAATCTTAAAAGTATTTTATTGGAGATACTCATATATGAAAAATCACTATCAAATGGGTTTGAGTTATAATTAGATATTATCTGTTTACAAAAAGTAATATTAAATCTTTTATCCAACTAAAAATAAATTTGCAATTTAGTGACATAAATATATTTCTAAGGAGTAAGAATAAATTTAGATATGATTTTAGTCTATGATAGCGAAAGTACTATATGTTTGTATCCAGTAACAAAAGATTGTGAATTTTGAAATAAGTTTAAGATAAAACTCTCTATCTAATCTTCTAAAACTTGTTGATTCGATGTAAACGTCGAACGTGATTCCAAACGTGCCCTAAATGTTTTATTTATACGATTTGTAATATATATATATATATATATATATATATATATATAGGTATGGGATGTAAAATTATGGAAGGATGTAAAAGAGAAGAAAGTGTTGGTGTCCAGTGCAAGGGTAACTCTTTTATGCAACATCCCTGTTCCAAAACATGCTGAAGATGCTTCAAATGCCCTCAAAACCTTTTCAAAATTGTAACTTTTTTTTTTGTTACAACATATTGGAAAAAGGGATATTTGTTCGAACCTATAATCTCATGGTTACTAAGTTGTATAAGATGTCGGTAGAGCTCTGCTCTCGTTGACTTTCAAAATTGTAACTTGATTGTACTTGTATAGTGTTAATTAGAATAATTGCCATAGGATCAATGGCATTAGATTAGTATAGATAATTAATATAGTATTAATATTTATTATTTTGTACTATTGTAATATTGTGTAAGACGTATTAAATTCATTAGGACTTTCTTGGATGATTATACTTTTTAGGTTTA

mRNA sequence

TTAGATTTTATGTAGTTGTCAAATACCCACAAATATTAAATCAACAATCCAATCCAAGATTTCACCCTCTCGAATTCTCCGATCAGAAAATCCCCAATTATGTCTACAAAAAATTCTCCGCCGTCGTCGAAGCCGGCGGTTCTGGACGCTGCGCTGGAGGCGTTGGGATTCGAGTTCGAACACGTTTCTTCAGTGGGCGTGACCGGCCGTCTTCTAGTTTCCCCAATTTGCTGCCAGCCCTTCAAAGTGTTGCACGGAGGAGTGTCGGCGTTGATAGCTGAGTCGCTTGCCAGCATGGCGGCTCACGTGGCTTCCGGCTACCGGAGGGTCGCCGGAATCCAACTCACTGTCAGCCATTTGAAGAGCGCCGCCCTCGGCGACCTCGTTTTCGCCGAAGCCGCTCCCGTCTCCCTTGGTAGAACCATTCAGGTATGGGATGTAAAATTATGGAAGGATGTAAAAGAGAAGAAAGTGTTGGTGTCCAGTGCAAGGGTAACTCTTTTATGCAACATCCCTGTTCCAAAACATGCTGAAGATGCTTCAAATGCCCTCAAAACCTTTTCAAAATTGTAACTTTTTTTTTTGTTACAACATATTGGAAAAAGGGATATTTGTTCGAACCTATAATCTCATGGTTACTAAGTTGTATAAGATGTCGGTAGAGCTCTGCTCTCGTTGACTTTCAAAATTGTAACTTGATTGTACTTGTATAGTGTTAATTAGAATAATTGCCATAGGATCAATGGCATTAGATTAGTATAGATAATTAATATAGTATTAATATTTATTATTTTGTACTATTGTAATATTGTGTAAGACGTATTAAATTCATTAGGACTTTCTTGGATGATTATACTTTTTAGGTTTA

Coding sequence (CDS)

ATGTCTACAAAAAATTCTCCGCCGTCGTCGAAGCCGGCGGTTCTGGACGCTGCGCTGGAGGCGTTGGGATTCGAGTTCGAACACGTTTCTTCAGTGGGCGTGACCGGCCGTCTTCTAGTTTCCCCAATTTGCTGCCAGCCCTTCAAAGTGTTGCACGGAGGAGTGTCGGCGTTGATAGCTGAGTCGCTTGCCAGCATGGCGGCTCACGTGGCTTCCGGCTACCGGAGGGTCGCCGGAATCCAACTCACTGTCAGCCATTTGAAGAGCGCCGCCCTCGGCGACCTCGTTTTCGCCGAAGCCGCTCCCGTCTCCCTTGGTAGAACCATTCAGGTATGGGATGTAAAATTATGGAAGGATGTAAAAGAGAAGAAAGTGTTGGTGTCCAGTGCAAGGGTAACTCTTTTATGCAACATCCCTGTTCCAAAACATGCTGAAGATGCTTCAAATGCCCTCAAAACCTTTTCAAAATTGTAA

Protein sequence

MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDVKEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL

Homology

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BLAST of Sed0023042.1 vs. NCBI nr
Match: XP_038903276.1 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60
Identity = 122/156 (78.21%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 2   STKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAE 61
           ST N+PP SKP VLDA L+A GFE + VSS  V+GRLLVSPICCQPFKVLHGGVSALIAE
Sbjct: 3   STDNAPP-SKPPVLDATLQAFGFEVDQVSSHKVSGRLLVSPICCQPFKVLHGGVSALIAE 62

Query: 62  SLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDVK 121
           SLASM AH ASGY+RVAGI L+++HLKSAALGDLV AEA PV++GRTIQVWDV+LWKD+K
Sbjct: 63  SLASMGAHTASGYQRVAGIHLSINHLKSAALGDLVLAEAVPVTVGRTIQVWDVQLWKDLK 122

Query: 122 EKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           E+KV+VS+ARVTLLCN+PVPKHAE+A++ALK+FSKL
Sbjct: 123 ERKVVVSTARVTLLCNMPVPKHAENAADALKSFSKL 157

[Close]

BLAST of Sed0023042.1 vs. NCBI nr
Match: XP_022955680.1 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Cucurbita moschata] >XP_023528065.1 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 3.2e-59
Identity = 119/157 (75.80%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIA 60
           MS+ + PP S P VLD  L A GFE +HVS   V GRLLVS ICCQPFKVLHGGVSALIA
Sbjct: 1   MSSTDPPPPSTPPVLDVTLHAFGFEIDHVSPQRVAGRLLVSSICCQPFKVLHGGVSALIA 60

Query: 61  ESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV 120
           ESLAS+ AH ASGY+RVAGI L+++HLKSAALGDLV AEAAPV++GRTIQVWDVKLWKD+
Sbjct: 61  ESLASIGAHTASGYQRVAGIHLSINHLKSAALGDLVLAEAAPVTVGRTIQVWDVKLWKDL 120

Query: 121 KEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           KE KV+VS+ARVTLLCN+PVPKHAE+A+NALK F+KL
Sbjct: 121 KETKVVVSTARVTLLCNLPVPKHAENAANALKMFAKL 157

[Close]

BLAST of Sed0023042.1 vs. NCBI nr
Match: XP_022979957.1 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 9.2e-59
Identity = 119/157 (75.80%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIA 60
           MS    PP S P VLD  L A GFE +HVS   V GRLLVS ICCQPFKVLHGGVSALIA
Sbjct: 1   MSPTEPPPPSTPPVLDVTLHAFGFEIDHVSPQRVAGRLLVSSICCQPFKVLHGGVSALIA 60

Query: 61  ESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV 120
           ESLAS+ AH ASGY+RVAGI L+++HLKSAALGDLVFAEAAPV++GRTIQVWDVKLWKD+
Sbjct: 61  ESLASIGAHTASGYQRVAGIHLSINHLKSAALGDLVFAEAAPVTVGRTIQVWDVKLWKDL 120

Query: 121 KEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           KE KV+VS+ARVTLLCN+PVPKHA +A+NALK F+KL
Sbjct: 121 KETKVVVSTARVTLLCNLPVPKHAVNAANALKMFAKL 157

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BLAST of Sed0023042.1 vs. NCBI nr
Match: KAG6582134.1 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 2.7e-58
Identity = 118/157 (75.16%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIA 60
           MS+ + PP S P VLD  L A GFE +HVS   V GRLLVS ICCQPFKVLHGGVSALIA
Sbjct: 1   MSSTDPPPPSTPPVLDVTLHAFGFEIDHVSPQRVAGRLLVSSICCQPFKVLHGGVSALIA 60

Query: 61  ESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV 120
           ESLAS+ AH ASGY+RVAGI L+++HLKSAALGDLV AEAAPV++GRTIQVWDVKLWKD+
Sbjct: 61  ESLASIGAHTASGYQRVAGIHLSINHLKSAALGDLVLAEAAPVTVGRTIQVWDVKLWKDL 120

Query: 121 KEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           KE KV+VS+ARVTLLCN+ VPKHAE+A+NALK F+KL
Sbjct: 121 KETKVVVSTARVTLLCNLAVPKHAENAANALKMFAKL 157

[Close]

BLAST of Sed0023042.1 vs. NCBI nr
Match: XP_004147638.1 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Cucumis sativus] >KGN57219.1 hypothetical protein Csa_011774 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 113/149 (75.84%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 9   SSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAA 68
           S+ P VLDA L++LGFE  HVS   V+GRLLVSPICCQPFKVLHGGVSALIAESLASM A
Sbjct: 7   SNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGA 66

Query: 69  HVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDVKEKKVLVS 128
           H ASGY+RVAGI L+++HLKSA+LG+LV AEA PV++GRTIQVWDV+LWKD+KE+KV+VS
Sbjct: 67  HKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKERKVVVS 126

Query: 129 SARVTLLCNIPVPKHAEDASNALKTFSKL 158
           +ARVTLL N+PVPKH EDA++ALK FSKL
Sbjct: 127 TARVTLLSNMPVPKHVEDAADALKKFSKL 155

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BLAST of Sed0023042.1 vs. ExPASy Swiss-Prot
Match: Q9SX65 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=DHNAT1 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.6e-52
Identity = 101/152 (66.45%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 9   SSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAA 68
           SS    +D  L  LGFEF+ +S   +TGRL VSP+CCQPFKVLHGGVSALIAESLASM A
Sbjct: 5   SSNTKAIDPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGA 64

Query: 69  HVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV---KEKKV 128
           H+ASG++RVAGIQL+++HLKSA LGDLVFAEA PVS G+TIQVW+VKLWK     K  K+
Sbjct: 65  HMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTQKDKANKI 124

Query: 129 LVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           L+SS+RVTL+CN+P+P +A+DA+N LK  +KL
Sbjct: 125 LISSSRVTLICNLPIPDNAKDAANMLKMVAKL 156

[Close]

BLAST of Sed0023042.1 vs. ExPASy Swiss-Prot
Match: Q9FI76 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=DHNAT2 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-41
Identity = 83/155 (53.55%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 8   PSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMA 67
           P S   ++D  L+ LGF F+ +S+  V+G L ++  CCQPFKVLHGGVSALIAE+LAS+ 
Sbjct: 3   PKSPEFIIDQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASLG 62

Query: 68  AHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWK----DVKEK 127
           A +ASG++RVAGI L++ HL+ AALG++VFAE+ PVS+G+ IQVW+V+LWK    +  + 
Sbjct: 63  AGIASGFKRVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKKTETPDN 122

Query: 128 KVLVSSARVTLLCNIPVPKHAEDASNAL-KTFSKL 158
           K++VS++RVTL C +P+P H +DA + L K  SKL
Sbjct: 123 KIMVSTSRVTLFCGLPIPDHVKDAPDELKKVISKL 157

[Close]

BLAST of Sed0023042.1 vs. ExPASy Swiss-Prot
Match: P77781 (1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Escherichia coli (strain K12) OX=83333 GN=menI PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09
Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 22  LGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAAHVAS-GYRRVAGI 81
           L   FEH+    +   + V     QPF +LHGG S ++AES+ S+A ++ + G ++V G+
Sbjct: 24  LDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGL 83

Query: 82  QLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDVKEKKVLVSSARVT 134
           ++  +H++SA  G  V     P+ LG   QVW ++++    EK  L  S+R+T
Sbjct: 84  EINANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIF---DEKGRLCCSSRLT 132

[Close]

BLAST of Sed0023042.1 vs. ExPASy Swiss-Prot
Match: Q9I3A4 (Putative esterase PA1618 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA1618 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 20  EALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAAH--VASGYRRV 79
           + LG  FE      +T  + V     QPF +LHGG S ++AESL SMA++  V +     
Sbjct: 23  DLLGIRFEAFDDESLTASMPVDSRTHQPFGLLHGGASVVLAESLGSMASYLCVDTSQYYC 82

Query: 80  AGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKD 120
            G+++  +HL+    G  V A A  + LGRT  VWD++L  D
Sbjct: 83  VGLEVNANHLRGLRSG-RVTAVARAIHLGRTTHVWDIRLSGD 123

[Close]

BLAST of Sed0023042.1 vs. ExPASy Swiss-Prot
Match: P45083 (Putative esterase HI_1161 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1161 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-09
Identity = 41/121 (33.88%), Postives = 64/121 (52.89%), Query Frame = 0


Query: 16  DAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAAHVA-SGY 75
           ++A+  LG E        +   + V     QPF VLHGGVS  +AE++ S+A  +     
Sbjct: 18  NSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEG 77

Query: 76  RRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDVK-EKKVLVSSARVT 135
           + V G+ +  +HL+    G  V A A P++LGR IQVW +    D++ E+  L   +R+T
Sbjct: 78  KTVVGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQI----DIRTEENKLCCVSRLT 133

[Close]

BLAST of Sed0023042.1 vs. ExPASy TrEMBL
Match: A0A6J1GVR9 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457609 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 119/157 (75.80%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIA 60
           MS+ + PP S P VLD  L A GFE +HVS   V GRLLVS ICCQPFKVLHGGVSALIA
Sbjct: 1   MSSTDPPPPSTPPVLDVTLHAFGFEIDHVSPQRVAGRLLVSSICCQPFKVLHGGVSALIA 60

Query: 61  ESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV 120
           ESLAS+ AH ASGY+RVAGI L+++HLKSAALGDLV AEAAPV++GRTIQVWDVKLWKD+
Sbjct: 61  ESLASIGAHTASGYQRVAGIHLSINHLKSAALGDLVLAEAAPVTVGRTIQVWDVKLWKDL 120

Query: 121 KEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           KE KV+VS+ARVTLLCN+PVPKHAE+A+NALK F+KL
Sbjct: 121 KETKVVVSTARVTLLCNLPVPKHAENAANALKMFAKL 157

[Close]

BLAST of Sed0023042.1 vs. ExPASy TrEMBL
Match: A0A6J1IQ50 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479492 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.4e-59
Identity = 119/157 (75.80%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIA 60
           MS    PP S P VLD  L A GFE +HVS   V GRLLVS ICCQPFKVLHGGVSALIA
Sbjct: 1   MSPTEPPPPSTPPVLDVTLHAFGFEIDHVSPQRVAGRLLVSSICCQPFKVLHGGVSALIA 60

Query: 61  ESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV 120
           ESLAS+ AH ASGY+RVAGI L+++HLKSAALGDLVFAEAAPV++GRTIQVWDVKLWKD+
Sbjct: 61  ESLASIGAHTASGYQRVAGIHLSINHLKSAALGDLVFAEAAPVTVGRTIQVWDVKLWKDL 120

Query: 121 KEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           KE KV+VS+ARVTLLCN+PVPKHA +A+NALK F+KL
Sbjct: 121 KETKVVVSTARVTLLCNLPVPKHAVNAANALKMFAKL 157

[Close]

BLAST of Sed0023042.1 vs. ExPASy TrEMBL
Match: A0A0A0L876 (4HBT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G171760 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.0e-56
Identity = 113/149 (75.84%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 9   SSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAA 68
           S+ P VLDA L++LGFE  HVS   V+GRLLVSPICCQPFKVLHGGVSALIAESLASM A
Sbjct: 7   SNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGA 66

Query: 69  HVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDVKEKKVLVS 128
           H ASGY+RVAGI L+++HLKSA+LG+LV AEA PV++GRTIQVWDV+LWKD+KE+KV+VS
Sbjct: 67  HKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKERKVVVS 126

Query: 129 SARVTLLCNIPVPKHAEDASNALKTFSKL 158
           +ARVTLL N+PVPKH EDA++ALK FSKL
Sbjct: 127 TARVTLLSNMPVPKHVEDAADALKKFSKL 155

[Close]

BLAST of Sed0023042.1 vs. ExPASy TrEMBL
Match: A0A1S3AYE8 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucumis melo OX=3656 GN=LOC103483935 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.3e-54
Identity = 111/157 (70.70%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIA 60
           MS+ ++P  + P +LDA L++ GFE   VS   V GRLLVS ICCQPFKVLHGGVSALIA
Sbjct: 22  MSSTDNP--NPPLLLDAPLQSFGFEIHQVSPHKVAGRLLVSSICCQPFKVLHGGVSALIA 81

Query: 61  ESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV 120
           ESLASM AH ASGY+RVAGI L+++HLKSAALG+LV AEA PV++GRTIQVWDV+LWKD+
Sbjct: 82  ESLASMGAHKASGYQRVAGIHLSINHLKSAALGELVIAEAVPVTVGRTIQVWDVQLWKDL 141

Query: 121 KEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           KE+KV+VS+ARVTLLCN+PVPKH ++A++ALK FSKL
Sbjct: 142 KEQKVVVSTARVTLLCNMPVPKHVQNAADALKKFSKL 176

[Close]

BLAST of Sed0023042.1 vs. ExPASy TrEMBL
Match: A0A5D3C1G9 (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00120 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.6e-54
Identity = 111/157 (70.70%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MSTKNSPPSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIA 60
           MS+ ++P  + P +LDA L++ GFE   VS   V GRLLVS ICCQPFKVLHGGVSALIA
Sbjct: 1   MSSTDNP--NLPLLLDAPLQSFGFEIHQVSPHKVAGRLLVSSICCQPFKVLHGGVSALIA 60

Query: 61  ESLASMAAHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV 120
           ESLASM AH ASGY+RVAGI L+++HLKSAALG+LV AEA PV++GRTIQVWDV+LWKD+
Sbjct: 61  ESLASMGAHKASGYQRVAGIHLSINHLKSAALGELVIAEAVPVTVGRTIQVWDVQLWKDL 120

Query: 121 KEKKVLVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           KE+KV+VS+ARVTLLCN+PVPKH ++A++ALK FSKL
Sbjct: 121 KEQKVVVSTARVTLLCNMPVPKHVQNAADALKKFSKL 155

[Close]

BLAST of Sed0023042.1 vs. TAIR 10
Match: AT1G48320.1 (Thioesterase superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 4.7e-53
Identity = 101/152 (66.45%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 9   SSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMAA 68
           SS    +D  L  LGFEF+ +S   +TGRL VSP+CCQPFKVLHGGVSALIAESLASM A
Sbjct: 5   SSNTKAIDPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGA 64

Query: 69  HVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDV---KEKKV 128
           H+ASG++RVAGIQL+++HLKSA LGDLVFAEA PVS G+TIQVW+VKLWK     K  K+
Sbjct: 65  HMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTQKDKANKI 124

Query: 129 LVSSARVTLLCNIPVPKHAEDASNALKTFSKL 158
           L+SS+RVTL+CN+P+P +A+DA+N LK  +KL
Sbjct: 125 LISSSRVTLICNLPIPDNAKDAANMLKMVAKL 156

[Close]

BLAST of Sed0023042.1 vs. TAIR 10
Match: AT5G48950.1 (Thioesterase superfamily protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 83/155 (53.55%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 8   PSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMA 67
           P S   ++D  L+ LGF F+ +S+  V+G L ++  CCQPFKVLHGGVSALIAE+LAS+ 
Sbjct: 3   PKSPEFIIDQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASLG 62

Query: 68  AHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWK----DVKEK 127
           A +ASG++RVAGI L++ HL+ AALG++VFAE+ PVS+G+ IQVW+V+LWK    +  + 
Sbjct: 63  AGIASGFKRVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKKTETPDN 122

Query: 128 KVLVSSARVTLLCNIPVPKHAEDASNAL-KTFSKL 158
           K++VS++RVTL C +P+P H +DA + L K  SKL
Sbjct: 123 KIMVSTSRVTLFCGLPIPDHVKDAPDELKKVISKL 157

[Close]

BLAST of Sed0023042.1 vs. TAIR 10
Match: AT5G48950.2 (Thioesterase superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-29
Identity = 63/114 (55.26%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 8   PSSKPAVLDAALEALGFEFEHVSSVGVTGRLLVSPICCQPFKVLHGGVSALIAESLASMA 67
           P S   ++D  L+ LGF F+ +S+  V+G L ++  CCQPFKVLHGGVSALIAE+LAS+ 
Sbjct: 3   PKSPEFIIDQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASLG 62

Query: 68  AHVASGYRRVAGIQLTVSHLKSAALGDLVFAEAAPVSLGRTIQVWDVKLWKDVK 122
           A +ASG++RVAGI L++ HL+ AALG++VFAE+ PVS+G+ IQ  D+K   +VK
Sbjct: 63  AGIASGFKRVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQTEDLKSKMNVK 116

The following BLAST results are available for this feature:

BLAST of Sed0023042.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903276.1	2.9e-60	78.21	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X1 [Benincasa hispida]	[more]
XP_022955680.1	3.2e-59	75.80	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Cucurbita moschata] >XP_02352...	[more]
XP_022979957.1	9.2e-59	75.80	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Cucurbita maxima]	[more]
KAG6582134.1	2.7e-58	75.16	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, partial [Cucurbita argyrosperma su...	[more]
XP_004147638.1	1.2e-55	75.84	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Cucumis sativus] >KGN57219.1 hypot...	[more]

BLAST of Sed0023042.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX65	6.6e-52	66.45	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FI76	1.8e-41	53.55	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P77781	5.3e-09	33.63	1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Escherichia coli (strain K12) OX=8333...	[more]
Q9I3A4	5.3e-09	37.25	Putative esterase PA1618 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2264...	[more]
P45083	6.9e-09	33.88	Putative esterase HI_1161 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 111...	[more]

BLAST of Sed0023042.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVR9	1.5e-59	75.80	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IQ50	4.4e-59	75.80	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0L876	6.0e-56	75.84	4HBT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G171760 PE=4 S...	[more]
A0A1S3AYE8	7.3e-54	70.70	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3C1G9	9.6e-54	70.70	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like OS=Cucumis melo var. makuwa OX...	[more]

BLAST of Sed0023042.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48320.1	4.7e-53	66.45	Thioesterase superfamily protein	[more]
AT5G48950.1	1.3e-42	53.55	Thioesterase superfamily protein	[more]
AT5G48950.2	1.2e-29	55.26	Thioesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003736	Phenylacetic acid degradation-related domain	TIGRFAM	TIGR00369	TIGR00369	coord: 18..133 e-value: 7.5E-18 score: 62.7
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 49..119 e-value: 1.2E-13 score: 51.2
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 5..137 e-value: 1.6E-43 score: 149.7
None	No IPR available	PANTHER	PTHR43240	1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1	coord: 2..157
None	No IPR available	PANTHER	PTHR43240:SF5	1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1	coord: 2..157
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 21..133 e-value: 1.99835E-24 score: 89.1541
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 16..134

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0023042	Sed0023042	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023042.1-five_prime_utr	Sed0023042.1-five_prime_utr-LG12:4331023..4331121	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023042.1-exon	Sed0023042.1-exon-LG12:4331023..4331259	exon
Sed0023042.1-exon	Sed0023042.1-exon-LG12:4331357..4331548	exon
Sed0023042.1-exon	Sed0023042.1-exon-LG12:4332772..4333210	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023042.1-cds	Sed0023042.1-cds-LG12:4331122..4331259	CDS
Sed0023042.1-cds	Sed0023042.1-cds-LG12:4331357..4331548	CDS
Sed0023042.1-cds	Sed0023042.1-cds-LG12:4332772..4332915	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023042.1-three_prime_utr	Sed0023042.1-three_prime_utr-LG12:4332916..4333210	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0023042.1	Sed0023042.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042372	phylloquinone biosynthetic process
biological_process	GO:0051289	protein homotetramerization
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0061522	1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity