Sed0021814.2 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGACTTTCCACATATAAAGTGAGGTTGTGAGATAAAATAGATAGTGTTTCTCCTTGTAAGAAAGCTTCTTGTTTCTTTGTAGAGAGAAGGTTTGTAACTCCTATTTTATAATAAAGTTCTTCTATCTTTGCCCGTGGTTTTTACCCTAATTTATTTAGGGGTTTTCCACGTAAAATCACTGTGTCATTCTTTCTCTTCTTCCTCTTCACTATTATTGTAATTTTCAATCTCTTTTTTAGCTTCTACCCTACTTTATTTGTGTAAACAATTATAACAATACAAACTCACGAACACTGAACGAAAAAAAAAACTACGAAAAAACAAGAACCAACGAAAACCTAGAAAAATTGCATAGTCAACTTACTTTGTTTTATTATTATTTAAAAAAAAAATCAACAATGGTGAATTAGAAATCTAGAATAAAGAAGAAAAAGTTTCAACAATCAAATATTAAAGAAAGAGGAAGAGAAGTCGGCTCGACTGCTTCACAAGATTTAGGTTAGTTATTTTGGGAATGAATTCGAGAGACAGTAAGGAAATAAAACGGAATATCAAAAAAGGAAATATTAATTTCATTAATAGAGGGGCATAATTGTAATGTACTACATTAATTATTTTAATTAATAAAAATAGAAGTGATTATAAATGCAAATACTTTGAAAGTTGCTTACATTTGTATTTTTTTTTTGTAAAACGAGACCGCCCATTACAATTTTCTTAAAAAATAAAAATATTATAAAAATGGAAATATCGTTTAGTGAATGTTTGTGGAATGGTTATGAAATGAAGAAAATACGAATGAGAATGATTTTTGGTATTCAACCACTAAGAATCATTTTCTCCATTTTTTTTTCTTCTAATTAGTTTTTGTTTTTTTCTTAACTTTTCATTATGAGAATAATTATTTTCACTTGCATTATACCCATTATATCATTATTATTTTTTCATAATCGTGTATTTCATTTCCCCAAACATCCCCTTCATCTTTTCAGTTGTTAAAAATACAAAGGCAAAATGAAAAGAGAAATCAAGAGCAAAGAATCGTTGGACTTTTTGAGAGGAAGAGACGAAATCAAACACAAACACAAACCGTAACTGGGGGCTCTGCAATTCCAGATCTTGGTGTCCTCCTTCCATGGCGAAGGGCAGGCAGTACCGTCTTCCTTCTCGGAAGTCTTCTTCTTCTTCCACTCTCGTCTTCACCCTTCTCATTCTCTTCACCTTCCTCCTTCTCCTCCTTCTTTCCCTCGGAATCCTCTCCCTCCCCGGCACCTCCGCCGGTTCGCCCAAACCCCACGATCTCACCTCCATTCTGCGCACAACTGCCCACGAGTACGCCATCTCCTCCATTTCAATTTCAGCTTCAGTTTCTTCTTCTCTTATGCCTTGGCTCTTCATTCATTTCGCGGTTTTGTTCCAATTTGTCAATTTCAGTGTGGACGACCACAAAGGGGAGCGCTGGGCGGAAGTCATCTCCTGGGAACCTAGAGCCTTCGTTTATCACAATTTTCTGGTACCTGATTTGTGTTTGCAGTTCCTTAAACTTGATTGACGTATGCTACCCCCTTTACATGATTCTCTTTGAAATTACTGAACTGGTTTGCTTCTTGACTGCTCAGACAAAGGAGGAATGCGAGTACCTAATCAGCCTCGCCAAGCCTCGCATGCAGAAGTCTACTGTTGTGGACAGTGAAACTGGAAAGAGTAAAGATAGCAGGTTTTGTTATTATTTTCCCTTCAATTTCTTATTGTGAATGAGCTTGGATCTCTGATGGAGAAACCTCCATGGCCTCTCTTTCACAGAGTTCGCACCAGCTCGGGAACTTTTTTGCAGAGAGGGCGTGATAAGATTATTAGAAACATTGAGAAAAGGATTTCTGATTTCAGCTTCATTCCCGTAGGTATTAACTTCGAGCCTCTTTCCTTCTTCCTGGTTTCTTCCATTCCAACTACATCAAGCATTATTTTTTGCTCATCATGCATGGTTGGAATCAAACTTAGTGATCTTAGTTAGTTCGTACTGCACCTATCATTGTGTTATAGTTTTCCAAACTCCCCCTGTTATGAAAACGAAGCAACAATCAAAAGAAACGGTAAAAACGTGTCTAATGATGTATTAGCTACGTCTACGGGCACAAGAAAAGAACGGTTTTATTAAGGAGAATACAAATTACAGAATGTTGATCATCAGGAAGATATTTTCTCATATATTTCGAGGATTACAATTGGCCTATTTATAAAAGCCTGTGCCAAATATACATGAAAAATAACTAGTTGTTGTTACAGGATTTACAGGAAGATCTTAACTGATAAAAAATAAAATATTGAATAATAAATTCCTTAATAGTTTTAAGAGAGTTTATATAGTGCACTTTCATAAAATCCTATTGACCAGGCAGCGAGGTACCGAGTAATTAATTGAGGAGCATCAAAAAGTTTAAGCCATATCTCAATACTGCCTATAATCTATCATTTCCCATCATAACTTTGCTTTCGTTAAAAAACAATCATGTACAATACCATTCAATTAGAACAATTACTGTGCGAAGTTTCACATGGATTAGGAAGATTTTTAAGCTTGGTTGAAAACTTGAACAACGAATGTCCACCCATTTGTAGGAACATCAAATTATCCAAATATTAGGCCTTTGAACTTATCCACCCATTGTCCCTTTTAATAATGAAAGAGAATTGAGTTCAACTGATTAGATGTGCCAATTTTTTGTTTAGTATATGCTGATATTGTCTGGTTATCTTTTGAATTTTTCATAAAATCCATAAGTATTGCACACTAGTTTCATATTTGTTTGTAATGAAGCCCACACATAATATATGCAGAGCATGGAGAAGGACTTCAGGTTCTTCATTACGAAGTGGGACAGAAATATGAACCTCATTTTGATTACTTCCTTGATGAATACAATACAAAGAACGGAGGTCAACGTATAGCGACAGTGCTTATGTATCTGTAAGTAGTAATCCATATTTATGTCCACCATGACTTAGAATCTAAACAATTGCTATTACATCTTGCATGGATCTCCTATTAATTCATATGACTTCTATCATAATTCAGTTCAGACGTTGAAGAAGGAGGAGAGACAGTGTTCCCTGCTGCCAAAGGGAACTTTAGTTCTGTACCTTGGTGGAATGAGCTTTCAGATTGTGGGAAGAAAGGACTTTCTGTTAAACCGAAGAGGGGTGATGCATTGCTTTTTTGGAGCATGAAGCCTGATGCCTCTCTAGATCCATCAAGTTTGCATGGTTAGAATTTTTATTTTTTTATTTTTTTTATATCCTTGATTGTCCGGGCCTGCTTGCTCGCACCTCGACTATGTCACAGGACGTGCCGCCTGACCTTATAACATTTGGATGACAAGGAAACTGGTAAACAATTAATTCCTCGGTTGGTAGTAACCATGGATTGAATTCTTTGCCTCTTAGCTCACTAAGACCCTTTTGACCACTAGGCCAGATGATTAGTTTGCATGGTTAGATTAGATGCGCTTAGATTATAATCTACCATTTCGTTTTACGAGCATTATAGTTTTCAGTGATGCAGAATTGTCTTTGTTAGTGGGATTTCTTTCACATCTCTTATGTGGAACTGGAAAGTAATGGATTTTCCGGATAAAATGACAACATTTCTCTTGCTGGTCATTTATAGGCGGTTGCCCTGTTATTACCGGGAACAAATGGTCTGCTACTAAATGGATGCGAGTAGAAGAATACAAAGCTTGAGTTGATGTGACCAAGGTAATTTTCATGCTCTAAACAATGCTTAAAGAACTACATTACATTTTCAGATAGGATCTAAGTTATATCGAAATATAAAAAGGAAAAGTAGATACAAATTAATCAAGTATTTGGTGGATGGTTGACTACCTCCTTTCATCCTCAACTTCTCTATTTACAAAAGAAATACAATAACCAACTCTCTTTGATTTGCTAACCCACCCCTATTATATCTCTAAATCACTCTCAAGGACATACCTATCCTTTTCTTTTGGCCTTTCAAGTCTCAGCATAGAATATACAGGCACTTATTGGACAGACACTCTTGATTCTTTCCTATATTATTCTGCTTGGAAATAACTAAATTTGCCTGAAATTCTGAATCACTTTCAAATTAAGCATGATAATAACTTGACTGAGATTTCTTGGTATTTCTAAAGAACTATTCCTAAGATTTGATGCTTCATTGTTTGGCAGGATTGGTTTACTTTTCTTGTTATTGCTCAAAGTCACAGATGCATTTGATGTAGGTAATTTAACCTTGTGCGCCGACTACTCTCAACCCGTAAAGCTATGAATTTTGATGTGCTTAATATTTTAATTACGAGCTTACATTGATTTCTTGTTTATGACCACAAGAGTTTAAGAATTCATATTTTTGCCAGAAAGGCCACATCCAAACCTCAGTTATACATTCATATGGTATGTTGTGTAAAAAAAAACAAAGCTTTACTTTTGATGTAACATGGTTATGTTTTTTTATTTGATACTATCATTCTTC CAAGACTTTCCACATATAAAGTGAGGTTGTGAGATAAAATAGATAGTGTTTCTCCTTGTAAGAAAGCTTCTTGTTTCTTTGTAGAGAGAAGTTGTTAAAAATACAAAGGCAAAATGAAAAGAGAAATCAAGAGCAAAGAATCGTTGGACTTTTTGAGAGGAAGAGACGAAATCAAACACAAACACAAACCGTAACTGGGGGCTCTGCAATTCCAGATCTTGGTGTCCTCCTTCCATGGCGAAGGGCAGGCAGTACCGTCTTCCTTCTCGGAAGTCTTCTTCTTCTTCCACTCTCGTCTTCACCCTTCTCATTCTCTTCACCTTCCTCCTTCTCCTCCTTCTTTCCCTCGGAATCCTCTCCCTCCCCGGCACCTCCGCCGGTTCGCCCAAACCCCACGATCTCACCTCCATTCTGCGCACAACTGCCCACGAGTACGCCATCTCCTCCATTTCAATTTCAGCTTCAGTTTCTTCTTCTCTTATGCCTTGGCTCTTCATTCATTTCGCGGTTTTGTTCCAATTTGTCAATTTCAGTGTGGACGACCACAAAGGGGAGCGCTGGGCGGAAGTCATCTCCTGGGAACCTAGAGCCTTCGTTTATCACAATTTTCTGACAAAGGAGGAATGCGAGTACCTAATCAGCCTCGCCAAGCCTCGCATGCAGAAGTCTACTGTTGTGGACAGTGAAACTGGAAAGAGTAAAGATAGCAGAGTTCGCACCAGCTCGGGAACTTTTTTGCAGAGAGGGCGTGATAAGATTATTAGAAACATTGAGAAAAGGATTTCTGATTTCAGCTTCATTCCCGTAGAGCATGGAGAAGGACTTCAGGTTCTTCATTACGAAGTGGGACAGAAATATGAACCTCATTTTGATTACTTCCTTGATGAATACAATACAAAGAACGGAGGTCAACGTATAGCGACAGTGCTTATGTATCTTTCAGACGTTGAAGAAGGAGGAGAGACAGTGTTCCCTGCTGCCAAAGGGAACTTTAGTTCTGTACCTTGGTGGAATGAGCTTTCAGATTGTGGGAAGAAAGGACTTTCTGTTAAACCGAAGAGGGGTGATGCATTGCTTTTTTGGAGCATGAAGCCTGATGCCTCTCTAGATCCATCAAGTTTGCATGGCGGTTGCCCTGTTATTACCGGGAACAAATGGTCTGCTACTAAATGGATGCGAGTAGAAGAATACAAAGCTTGAGTTGATGTGACCAAGGATTGGTTTACTTTTCTTGTTATTGCTCAAAGTCACAGATGCATTTGATGTAGGTAATTTAACCTTGTGCGCCGACTACTCTCAACCCGTAAAGCTATGAATTTTGATGTGCTTAATATTTTAATTACGAGCTTACATTGATTTCTTGTTTATGACCACAAGAGTTTAAGAATTCATATTTTTGCCAGAAAGGCCACATCCAAACCTCAGTTATACATTCATATGGTATGTTGTGTAAAAAAAAACAAAGCTTTACTTTTGATGTAACATGGTTATGTTTTTTTATTTGATACTATCATTCTTC ATGGCGAAGGGCAGGCAGTACCGTCTTCCTTCTCGGAAGTCTTCTTCTTCTTCCACTCTCGTCTTCACCCTTCTCATTCTCTTCACCTTCCTCCTTCTCCTCCTTCTTTCCCTCGGAATCCTCTCCCTCCCCGGCACCTCCGCCGGTTCGCCCAAACCCCACGATCTCACCTCCATTCTGCGCACAACTGCCCACGAGTACGCCATCTCCTCCATTTCAATTTCAGCTTCAGTTTCTTCTTCTCTTATGCCTTGGCTCTTCATTCATTTCGCGGTTTTGTTCCAATTTGTCAATTTCAGTGTGGACGACCACAAAGGGGAGCGCTGGGCGGAAGTCATCTCCTGGGAACCTAGAGCCTTCGTTTATCACAATTTTCTGACAAAGGAGGAATGCGAGTACCTAATCAGCCTCGCCAAGCCTCGCATGCAGAAGTCTACTGTTGTGGACAGTGAAACTGGAAAGAGTAAAGATAGCAGAGTTCGCACCAGCTCGGGAACTTTTTTGCAGAGAGGGCGTGATAAGATTATTAGAAACATTGAGAAAAGGATTTCTGATTTCAGCTTCATTCCCGTAGAGCATGGAGAAGGACTTCAGGTTCTTCATTACGAAGTGGGACAGAAATATGAACCTCATTTTGATTACTTCCTTGATGAATACAATACAAAGAACGGAGGTCAACGTATAGCGACAGTGCTTATGTATCTTTCAGACGTTGAAGAAGGAGGAGAGACAGTGTTCCCTGCTGCCAAAGGGAACTTTAGTTCTGTACCTTGGTGGAATGAGCTTTCAGATTGTGGGAAGAAAGGACTTTCTGTTAAACCGAAGAGGGGTGATGCATTGCTTTTTTGGAGCATGAAGCCTGATGCCTCTCTAGATCCATCAAGTTTGCATGGCGGTTGCCCTGTTATTACCGGGAACAAATGGTCTGCTACTAAATGGATGCGAGTAGAAGAATACAAAGCTTGA MAKGRQYRLPSRKSSSSSTLVFTLLILFTFLLLLLLSLGILSLPGTSAGSPKPHDLTSILRTTAHEYAISSISISASVSSSLMPWLFIHFAVLFQFVNFSVDDHKGERWAEVISWEPRAFVYHNFLTKEECEYLISLAKPRMQKSTVVDSETGKSKDSRVRTSSGTFLQRGRDKIIRNIEKRISDFSFIPVEHGEGLQVLHYEVGQKYEPHFDYFLDEYNTKNGGQRIATVLMYLSDVEEGGETVFPAAKGNFSSVPWWNELSDCGKKGLSVKPKRGDALLFWSMKPDASLDPSSLHGGCPVITGNKWSATKWMRVEEYKA Homology
BLAST of Sed0021814.2 vs. NCBI nr
Match: XP_038881909.1 (probable prolyl 4-hydroxylase 10 isoform X1 [Benincasa hispida]) HSP 1 Score: 515.0 bits (1325), Expect = 4.7e-142 Identity = 257/320 (80.31%), Postives = 273/320 (85.31%), Query Frame = 0
BLAST of Sed0021814.2 vs. NCBI nr
Match: XP_022926539.1 (probable prolyl 4-hydroxylase 10 [Cucurbita moschata] >XP_023517633.1 probable prolyl 4-hydroxylase 10 [Cucurbita pepo subsp. pepo] >KAG7026717.1 putative prolyl 4-hydroxylase 10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 512.3 bits (1318), Expect = 3.0e-141 Identity = 257/321 (80.06%), Postives = 275/321 (85.67%), Query Frame = 0
BLAST of Sed0021814.2 vs. NCBI nr
Match: XP_008440878.1 (PREDICTED: probable prolyl 4-hydroxylase 10 [Cucumis melo]) HSP 1 Score: 511.5 bits (1316), Expect = 5.2e-141 Identity = 256/321 (79.75%), Postives = 271/321 (84.42%), Query Frame = 0
BLAST of Sed0021814.2 vs. NCBI nr
Match: XP_004134841.1 (probable prolyl 4-hydroxylase 10 [Cucumis sativus] >XP_031742781.1 probable prolyl 4-hydroxylase 10 [Cucumis sativus] >KGN48959.1 hypothetical protein Csa_003630 [Cucumis sativus]) HSP 1 Score: 510.8 bits (1314), Expect = 8.8e-141 Identity = 255/321 (79.44%), Postives = 271/321 (84.42%), Query Frame = 0
BLAST of Sed0021814.2 vs. NCBI nr
Match: XP_023521904.1 (probable prolyl 4-hydroxylase 10 [Cucurbita pepo subsp. pepo] >XP_023543233.1 probable prolyl 4-hydroxylase 10 [Cucurbita pepo subsp. pepo] >KAG6603884.1 putative prolyl 4-hydroxylase 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034063.1 putative prolyl 4-hydroxylase 10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 510.8 bits (1314), Expect = 8.8e-141 Identity = 255/321 (79.44%), Postives = 272/321 (84.74%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy Swiss-Prot
Match: F4JZ24 (Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 5.4e-125 Identity = 223/320 (69.69%), Postives = 251/320 (78.44%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy Swiss-Prot
Match: Q24JN5 (Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana OX=3702 GN=P4H5 PE=2 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 3.3e-114 Identity = 209/320 (65.31%), Postives = 245/320 (76.56%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy Swiss-Prot
Match: Q9LN20 (Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 5.2e-112 Identity = 207/320 (64.69%), Postives = 242/320 (75.62%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy Swiss-Prot
Match: F4JNU8 (Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana OX=3702 GN=P4H8 PE=3 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-110 Identity = 202/317 (63.72%), Postives = 232/317 (73.19%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy Swiss-Prot
Match: Q8LAN3 (Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana OX=3702 GN=P4H4 PE=2 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 7.4e-66 Identity = 118/209 (56.46%), Postives = 161/209 (77.03%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy TrEMBL
Match: A0A6J1EFG6 (probable prolyl 4-hydroxylase 10 OS=Cucurbita moschata OX=3662 GN=LOC111433654 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.5e-141 Identity = 257/321 (80.06%), Postives = 275/321 (85.67%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy TrEMBL
Match: A0A1S3B1P6 (probable prolyl 4-hydroxylase 10 OS=Cucumis melo OX=3656 GN=LOC103485167 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.5e-141 Identity = 256/321 (79.75%), Postives = 271/321 (84.42%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy TrEMBL
Match: A0A0A0KJH9 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507320 PE=4 SV=1) HSP 1 Score: 510.8 bits (1314), Expect = 4.3e-141 Identity = 255/321 (79.44%), Postives = 271/321 (84.42%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy TrEMBL
Match: A0A6J1GDV6 (probable prolyl 4-hydroxylase 10 OS=Cucurbita moschata OX=3662 GN=LOC111453285 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 5.6e-141 Identity = 254/321 (79.13%), Postives = 272/321 (84.74%), Query Frame = 0
BLAST of Sed0021814.2 vs. ExPASy TrEMBL
Match: A0A6J1IRF1 (probable prolyl 4-hydroxylase 10 OS=Cucurbita maxima OX=3661 GN=LOC111478689 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.8e-140 Identity = 252/321 (78.50%), Postives = 271/321 (84.42%), Query Frame = 0
BLAST of Sed0021814.2 vs. TAIR 10
Match: AT5G66060.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 448.7 bits (1153), Expect = 3.8e-126 Identity = 223/320 (69.69%), Postives = 251/320 (78.44%), Query Frame = 0
BLAST of Sed0021814.2 vs. TAIR 10
Match: AT2G17720.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 412.9 bits (1060), Expect = 2.3e-115 Identity = 209/320 (65.31%), Postives = 245/320 (76.56%), Query Frame = 0
BLAST of Sed0021814.2 vs. TAIR 10
Match: AT1G20270.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 405.6 bits (1041), Expect = 3.7e-113 Identity = 207/320 (64.69%), Postives = 242/320 (75.62%), Query Frame = 0
BLAST of Sed0021814.2 vs. TAIR 10
Match: AT4G35810.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 401.0 bits (1029), Expect = 9.1e-112 Identity = 202/317 (63.72%), Postives = 232/317 (73.19%), Query Frame = 0
BLAST of Sed0021814.2 vs. TAIR 10
Match: AT5G66060.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 344.0 bits (881), Expect = 1.3e-94 Identity = 178/269 (66.17%), Postives = 203/269 (75.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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