Sed0021321.2 (mRNA) Chayote v1

Overview


Name	Sed0021321.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	stem-specific protein TSJT1-like
Location	LG05: 37547156 .. 37548965 (-)
Sequence length	1144
RNA-Seq Expression	Sed0021321.2
Synteny	Sed0021321.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTATTATATAGTGTGTGTGTGGGATGCGAAACCGTGGAGAGAAAATAACGCAAAATGTTGGGTATTTTTCACAAAACTTTCGCACACCCACCTGAGGAACTCAACAGCCCTGCCTCTTTGAGCGGCTGTAAAACCCCTAAACTCCCTCAAGAAACGCTCGAAGAGTTTCTTGGTCGCCACCCTCACAACACTTTCTCTATCAATTTCGCTCAGGCTGCCGTTCTTGCTTATGTTCCTCCTGATCGCCCTTTCTCTCTCAACCAAAGGTAATTTATTTTACACCCAATTACTTTTAGTGGATATATTTGGGGGGGGAACAGAAATAGAAATGATCATGGGAAAATTGAATGTACAATGAATAAACTAATTAAGAACAACATAATTATTTGTATTTAGATTGAAAGGTTAAACTTAGATTAAATGATTATAGAGATAATGCTTATTTGTTTTCTAAGGGAAAAAGGTGATTATGAAAAAAATTAAATTAAATTTAAAGTACAAGTTTAGCGAAAGGGTTAGTAACATGTGTTTTTGATAAAATGGTCAATTTCGTTGTTTGGTGAAAATACAGTTCAAAATTACATTCACAGATTTGAACATAAAAATTGATATTTGGCTCTTGTTTATTCGATTGGCAATACACTGCTTGCCCTTTTTAACGCTCGGTGAATTAAGAGTTAGTTATTCCTATCATCGGTCCGTAAATATAGAGATTTCATATATTTAATGCTTATGCAATTATTTATGATAAGCACTAACATTTTAGATTTTATAGAACTATACGGAGCAAAGTCTATAGCTAGGTAAAAAAAAAAGAAGTGATTTTGGAGAAATATGTAACACCTAACATCAACATGTTTCCATTTTATCCCTTTGCCATTAATAACATCCCCTTAATCTCAAGGAATTTCGATTTCCCTTTTTGGTGGCAGGCTGTTCTGTGGGTTTGATGACATATACTGTGTGTTCTTGGGAACTTTGAACAATCTATGTGCGCTGAACAAGCAATACGGCTTATCCAAGGGCTCAAACGAGGCCATGTTTCTGATTGAGGCTTACAGGACACTTAGAGACAGAGGCCCTTACCCAGCTGATCAGGTCCTTAAAGACCTAGACGGCAGTTTTGCCTTTGTTGTTTACGACAGCAGGGCTGGTACTGTTTTTGCTGCCTTGGTAAGTACATACTACATTCATCTCGAAACTAATTGTTGTATTTCTGCCTCTTTTAAGCGCACCAATCTTAAATAGCGCCATCTCAATTTTATTAGTAATTTCTAGGGAGCTGATGGAGGAGTGAAGCTGTACTGGGGAATAGCAGCAGATGGGTCAGTGGTTATATCAGATGATGTGGAAGTGATAAAGGAAGGGTGTGCTAAATCATATGCACCATTCCCAACAGGATGCATGTTCCATAGTGAAGGAGGGCTCATGAGCTTTGAGCACCCACTGCACAAGATGAAGCCAATGCCAAGAATTGACAGTGAAGGGGCCATGTGTGGAGCTAACTTCAAGGTTGATGTGTATACAAGAGTCAACAGCATTCCTAGGAGAGGCAGTGCAGCTAATTGGGCTGAATGGGAAACTAAATAAAATATAACTCACACATCACATACATTTCTATATGTAATGCTTAATTACTTCCATGTTTTTACTCTTACCATTTCTCTCTCCAATCCCTGTAATTACACAATATAAAATTCCTCCCTCTTTGCCTTTTTATTTACTCCCCTCACTCCTCACTAACTTCTTCAAATTCTAAATTTAAACAAACTGATAACCTTAAAATTTAGGATCATACAAACTGACA

mRNA sequence

ATATTATTATATAGTGTGTGTGTGGGATGCGAAACCGTGGAGAGAAAATAACGCAAAATGTTGGGTATTTTTCACAAAACTTTCGCACACCCACCTGAGGAACTCAACAGCCCTGCCTCTTTGAGCGGCTGTAAAACCCCTAAACTCCCTCAAGAAACGCTCGAAGAGTTTCTTGGTCGCCACCCTCACAACACTTTCTCTATCAATTTCGCTCAGGCTGCCGTTCTTGCTTATGTTCCTCCTGATCGCCCTTTCTCTCTCAACCAAAGGCTGTTCTGTGGGTTTGATGACATATACTGTGTGTTCTTGGGAACTTTGAACAATCTATGTGCGCTGAACAAGCAATACGGCTTATCCAAGGGCTCAAACGAGGCCATGTTTCTGATTGAGGCTTACAGGACACTTAGAGACAGAGGCCCTTACCCAGCTGATCAGGTCCTTAAAGACCTAGACGGCAGTTTTGCCTTTGTTGTTTACGACAGCAGGGCTGGTACTGTTTTTGCTGCCTTGGTAAGTACATACTACATTCATCTCGAAACTAATTGTTGTATTTCTGCCTCTTTTAAGCGCACCAATCTTAAATAGCGCCATCTCAATTTTATTAGTAATTTCTAGGGAGCTGATGGAGGAGTGAAGCTGTACTGGGGAATAGCAGCAGATGGGTCAGTGGTTATATCAGATGATGTGGAAGTGATAAAGGAAGGGTGTGCTAAATCATATGCACCATTCCCAACAGGATGCATGTTCCATAGTGAAGGAGGGCTCATGAGCTTTGAGCACCCACTGCACAAGATGAAGCCAATGCCAAGAATTGACAGTGAAGGGGCCATGTGTGGAGCTAACTTCAAGGTTGATGTGTATACAAGAGTCAACAGCATTCCTAGGAGAGGCAGTGCAGCTAATTGGGCTGAATGGGAAACTAAATAAAATATAACTCACACATCACATACATTTCTATATGTAATGCTTAATTACTTCCATGTTTTTACTCTTACCATTTCTCTCTCCAATCCCTGTAATTACACAATATAAAATTCCTCCCTCTTTGCCTTTTTATTTACTCCCCTCACTCCTCACTAACTTCTTCAAATTCTAAATTTAAACAAACTGATAACCTTAAAATTTAGGATCATACAAACTGACA

Coding sequence (CDS)

ATGTTGGGTATTTTTCACAAAACTTTCGCACACCCACCTGAGGAACTCAACAGCCCTGCCTCTTTGAGCGGCTGTAAAACCCCTAAACTCCCTCAAGAAACGCTCGAAGAGTTTCTTGGTCGCCACCCTCACAACACTTTCTCTATCAATTTCGCTCAGGCTGCCGTTCTTGCTTATGTTCCTCCTGATCGCCCTTTCTCTCTCAACCAAAGGCTGTTCTGTGGGTTTGATGACATATACTGTGTGTTCTTGGGAACTTTGAACAATCTATGTGCGCTGAACAAGCAATACGGCTTATCCAAGGGCTCAAACGAGGCCATGTTTCTGATTGAGGCTTACAGGACACTTAGAGACAGAGGCCCTTACCCAGCTGATCAGGTCCTTAAAGACCTAGACGGCAGTTTTGCCTTTGTTGTTTACGACAGCAGGGCTGGTACTGTTTTTGCTGCCTTGGTAAGTACATACTACATTCATCTCGAAACTAATTGTTGTATTTCTGCCTCTTTTAAGCGCACCAATCTTAAATAG

Protein sequence

MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYVPPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRGPYPADQVLKDLDGSFAFVVYDSRAGTVFAALVSTYYIHLETNCCISASFKRTNLK

Homology

[Close]

BLAST of Sed0021321.2 vs. NCBI nr
Match: XP_022139643.1 (stem-specific protein TSJT1-like [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75
Identity = 136/151 (90.07%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFHKTFAHPPEELNSPAS SG KTPKLP+ETL+EFL RHPHNTFS+NF +AAVLAYV
Sbjct: 1   MLAIFHKTFAHPPEELNSPASFSGSKTPKLPEETLKEFLSRHPHNTFSVNFGEAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           PPDRPFSL+QRLFCGFD+IYC+FLG+L+NLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPDRPFSLHQRLFCGFDEIYCLFLGSLSNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           PYPADQVLKDLDGSFAFVVYDSRAG VFAAL
Sbjct: 121 PYPADQVLKDLDGSFAFVVYDSRAGAVFAAL 151

[Close]

BLAST of Sed0021321.2 vs. NCBI nr
Match: XP_022940896.1 (stem-specific protein TSJT1-like [Cucurbita moschata])

HSP 1 Score: 286.2 bits (731), Expect = 1.9e-73
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           M  IFHKTFAHPPEELNSPAS SG KTPKLP+ET++EF+ RHPHNTFS+NF +AAVLAYV
Sbjct: 1   MFAIFHKTFAHPPEELNSPASFSGSKTPKLPKETVKEFISRHPHNTFSVNFGEAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           PPDRP SL+QRLFCGFDDIYC+FLG+LNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPDRPSSLSQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           PYPADQVLK+LDGSFAFVVYD RAG VFAAL
Sbjct: 121 PYPADQVLKELDGSFAFVVYDRRAGAVFAAL 151

[Close]

BLAST of Sed0021321.2 vs. NCBI nr
Match: KAG6607868.1 (LanC-like protein GCR2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.4 bits (729), Expect = 3.3e-73
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFHKTFAHPPEELNSPAS SG KTPKLP+ET++EF+ RHPHNTFS+NF +AAVLAYV
Sbjct: 1   MLAIFHKTFAHPPEELNSPASFSGSKTPKLPKETVKEFISRHPHNTFSVNFGEAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           PPDRP SL+QRLFCGFDDIYC+FLG+LNNLCALNKQYGLSK SNEAMFLIEAYRTLRDRG
Sbjct: 61  PPDRPSSLSQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKSSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           PYPADQVLK+LDGSFAFVVYD RAG VFAAL
Sbjct: 121 PYPADQVLKELDGSFAFVVYDRRAGAVFAAL 151

[Close]

BLAST of Sed0021321.2 vs. NCBI nr
Match: KAG6591974.1 (Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 5.6e-73
Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFHKTFAHPPEELNSPAS SG KTPKLP+ETL++FL RHPHNTFS+NF QAAVLAYV
Sbjct: 5   MLAIFHKTFAHPPEELNSPASFSGSKTPKLPEETLKDFLARHPHNTFSVNFGQAAVLAYV 64

Query: 61  PPD-RPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR 120
           PPD RPFS +QRLFCGFD+IYC+FLG+LNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR
Sbjct: 65  PPDGRPFSPHQRLFCGFDEIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR 124

Query: 121 GPYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           GPYPADQVLK+LDGSFAFVVYDSR G VFAAL
Sbjct: 125 GPYPADQVLKELDGSFAFVVYDSRVGAVFAAL 156

[Close]

BLAST of Sed0021321.2 vs. NCBI nr
Match: XP_022981300.1 (stem-specific protein TSJT1-like [Cucurbita maxima])

HSP 1 Score: 284.6 bits (727), Expect = 5.6e-73
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFHKTFAHPPEELNSPAS SG KTPKLP+ET++EF+ RHPHNTFS+NF +AAVLAYV
Sbjct: 1   MLAIFHKTFAHPPEELNSPASFSGSKTPKLPKETVKEFISRHPHNTFSVNFGEAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           PPDR  SL+QRLFCGFDDIYC+FLG+LNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPDRTSSLSQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           PYPADQVLK+LDGSFAFVVYD RAG VFAAL
Sbjct: 121 PYPADQVLKELDGSFAFVVYDRRAGAVFAAL 151

[Close]

BLAST of Sed0021321.2 vs. ExPASy Swiss-Prot
Match: P24805 (Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.1e-26
Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML +F ++   PP EL+ P +    K  K  +E  E F      +TF   F    +    
Sbjct: 1   MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREEIAESFKTWKQDSTFYHLFNGNFMAFSH 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
             + P  L  R     DD++C+F G L+N   L K YGLS+ + EAM ++EAY+ LRDR 
Sbjct: 61  GNENP--LQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRA 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAA 151
           PYP DQV+K+L+G FAF+++DS+A T+F A
Sbjct: 121 PYPPDQVIKELEGKFAFILFDSKASTLFLA 148

[Close]

BLAST of Sed0021321.2 vs. ExPASy TrEMBL
Match: A0A6J1CG50 (stem-specific protein TSJT1-like OS=Momordica charantia OX=3673 GN=LOC111010495 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.6e-76
Identity = 136/151 (90.07%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFHKTFAHPPEELNSPAS SG KTPKLP+ETL+EFL RHPHNTFS+NF +AAVLAYV
Sbjct: 1   MLAIFHKTFAHPPEELNSPASFSGSKTPKLPEETLKEFLSRHPHNTFSVNFGEAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           PPDRPFSL+QRLFCGFD+IYC+FLG+L+NLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPDRPFSLHQRLFCGFDEIYCLFLGSLSNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           PYPADQVLKDLDGSFAFVVYDSRAG VFAAL
Sbjct: 121 PYPADQVLKDLDGSFAFVVYDSRAGAVFAAL 151

[Close]

BLAST of Sed0021321.2 vs. ExPASy TrEMBL
Match: A0A6J1FJN8 (stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111446347 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.3e-74
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           M  IFHKTFAHPPEELNSPAS SG KTPKLP+ET++EF+ RHPHNTFS+NF +AAVLAYV
Sbjct: 1   MFAIFHKTFAHPPEELNSPASFSGSKTPKLPKETVKEFISRHPHNTFSVNFGEAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           PPDRP SL+QRLFCGFDDIYC+FLG+LNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPDRPSSLSQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           PYPADQVLK+LDGSFAFVVYD RAG VFAAL
Sbjct: 121 PYPADQVLKELDGSFAFVVYDRRAGAVFAAL 151

[Close]

BLAST of Sed0021321.2 vs. ExPASy TrEMBL
Match: A0A6J1IZ39 (stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111480473 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFHKTFAHPPEELNSPAS SG KTPKLP+ET++EF+ RHPHNTFS+NF +AAVLAYV
Sbjct: 1   MLAIFHKTFAHPPEELNSPASFSGSKTPKLPKETVKEFISRHPHNTFSVNFGEAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           PPDR  SL+QRLFCGFDDIYC+FLG+LNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPDRTSSLSQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           PYPADQVLK+LDGSFAFVVYD RAG VFAAL
Sbjct: 121 PYPADQVLKELDGSFAFVVYDRRAGAVFAAL 151

[Close]

BLAST of Sed0021321.2 vs. ExPASy TrEMBL
Match: A0A6J1FE84 (stem-specific protein TSJT1 OS=Cucurbita moschata OX=3662 GN=LOC111443272 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFHKTFAHPPEELNSPAS SG KTPKLP+ETL++FL RHPHNTFS+NF QAAVLAYV
Sbjct: 1   MLAIFHKTFAHPPEELNSPASFSGSKTPKLPEETLKDFLARHPHNTFSVNFGQAAVLAYV 60

Query: 61  PPD-RPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR 120
           PPD RPFS +QRLFCGFD+IYC+FLG+LNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR
Sbjct: 61  PPDGRPFSPHQRLFCGFDEIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR 120

Query: 121 GPYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           GPYPADQVLK+LDGSFAFVVYDSR G VFAAL
Sbjct: 121 GPYPADQVLKELDGSFAFVVYDSRVGAVFAAL 152

[Close]

BLAST of Sed0021321.2 vs. ExPASy TrEMBL
Match: A0A6J1IH84 (stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111476923 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 132/152 (86.84%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFH+TFAHPPEELNSPAS SG KTPKLP+ETL++FL RHP NTFS+NF QAAVLAYV
Sbjct: 1   MLAIFHETFAHPPEELNSPASFSGSKTPKLPEETLKDFLARHPPNTFSVNFGQAAVLAYV 60

Query: 61  PPD-RPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR 120
           PPD RPFS +QRLFCGFD+IYC+FLG+LNNLCALNKQYGLSKGSNEAMF IEAYRTLRDR
Sbjct: 61  PPDGRPFSPHQRLFCGFDEIYCLFLGSLNNLCALNKQYGLSKGSNEAMFFIEAYRTLRDR 120

Query: 121 GPYPADQVLKDLDGSFAFVVYDSRAGTVFAAL 152
           GPYPADQVLK+LDGSFAFVVYDSRAG VFAAL
Sbjct: 121 GPYPADQVLKELDGSFAFVVYDSRAGAVFAAL 152

[Close]

BLAST of Sed0021321.2 vs. TAIR 10
Match: AT4G27450.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 247.3 bits (630), Expect = 9.2e-66
Identity = 116/153 (75.82%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IFH+ FAHPPEELNSPAS    K PKLP+ETL +FL R+P NTFS++F QAAVLAYV
Sbjct: 1   MLAIFHEAFAHPPEELNSPASEKCSKQPKLPEETLNDFLLRYPLNTFSMSFGQAAVLAYV 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P   FS++QRLFCGFDDIYC+F G+LNNLC LNKQYGL+K +NEAMF+IEAYRTLRDRG
Sbjct: 61  RPSASFSIHQRLFCGFDDIYCLFFGSLNNLCQLNKQYGLTKTTNEAMFVIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAALVS 154
           PYPADQV+KDLDGSF+FVVYDS+AG+VF AL S
Sbjct: 121 PYPADQVVKDLDGSFSFVVYDSKAGSVFTALGS 153

[Close]

BLAST of Sed0021321.2 vs. TAIR 10
Match: AT3G15450.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 218.8 bits (556), Expect = 3.5e-57
Identity = 108/154 (70.13%), Postives = 122/154 (79.22%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IF K FAHPPEELNSPAS    KTPKLP ETL +FL  H +N FS+NF  +AVLAY 
Sbjct: 1   MLAIFQKAFAHPPEELNSPASHFSGKTPKLPGETLSDFLSHHQNNAFSMNFGDSAVLAYA 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLS-KGSNEAMFLIEAYRTLRDR 120
             +   SL QRLFCG D IYC+FLG LNNLC LN+QYGLS K SNEAMF+IEAYRTLRDR
Sbjct: 61  RQET--SLRQRLFCGLDGIYCMFLGRLNNLCTLNRQYGLSGKNSNEAMFVIEAYRTLRDR 120

Query: 121 GPYPADQVLKDLDGSFAFVVYDSRAGTVFAALVS 154
           GPYPADQVL+ L+GSFAFVVYD++  +VF+AL S
Sbjct: 121 GPYPADQVLRGLEGSFAFVVYDTQTSSVFSALSS 152

[Close]

BLAST of Sed0021321.2 vs. TAIR 10
Match: AT3G15450.2 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 218.8 bits (556), Expect = 3.5e-57
Identity = 108/154 (70.13%), Postives = 122/154 (79.22%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IF K FAHPPEELNSPAS    KTPKLP ETL +FL  H +N FS+NF  +AVLAY 
Sbjct: 1   MLAIFQKAFAHPPEELNSPASHFSGKTPKLPGETLSDFLSHHQNNAFSMNFGDSAVLAYA 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLS-KGSNEAMFLIEAYRTLRDR 120
             +   SL QRLFCG D IYC+FLG LNNLC LN+QYGLS K SNEAMF+IEAYRTLRDR
Sbjct: 61  RQET--SLRQRLFCGLDGIYCMFLGRLNNLCTLNRQYGLSGKNSNEAMFVIEAYRTLRDR 120

Query: 121 GPYPADQVLKDLDGSFAFVVYDSRAGTVFAALVS 154
           GPYPADQVL+ L+GSFAFVVYD++  +VF+AL S
Sbjct: 121 GPYPADQVLRGLEGSFAFVVYDTQTSSVFSALSS 152

[Close]

BLAST of Sed0021321.2 vs. TAIR 10
Match: AT3G15450.3 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 218.8 bits (556), Expect = 3.5e-57
Identity = 108/154 (70.13%), Postives = 122/154 (79.22%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML IF K FAHPPEELNSPAS    KTPKLP ETL +FL  H +N FS+NF  +AVLAY 
Sbjct: 1   MLAIFQKAFAHPPEELNSPASHFSGKTPKLPGETLSDFLSHHQNNAFSMNFGDSAVLAYA 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLS-KGSNEAMFLIEAYRTLRDR 120
             +   SL QRLFCG D IYC+FLG LNNLC LN+QYGLS K SNEAMF+IEAYRTLRDR
Sbjct: 61  RQET--SLRQRLFCGLDGIYCMFLGRLNNLCTLNRQYGLSGKNSNEAMFVIEAYRTLRDR 120

Query: 121 GPYPADQVLKDLDGSFAFVVYDSRAGTVFAALVS 154
           GPYPADQVL+ L+GSFAFVVYD++  +VF+AL S
Sbjct: 121 GPYPADQVLRGLEGSFAFVVYDTQTSSVFSALSS 152

[Close]

BLAST of Sed0021321.2 vs. TAIR 10
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-30
Identity = 69/150 (46.00%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 1   MLGIFHKTFAHPPEELNSPASLSGCKTPKLPQETLEEFLGRHPHNTFSINFAQAAVLAYV 60
           ML +F KT A+ PE L SP S        L   +L         N+ ++NF  +  +AY 
Sbjct: 1   MLAVFEKTVANSPEALQSPHSSESAFA--LKDGSLATHFASVNPNSVTLNFGSSGFVAY- 60

Query: 61  PPDRPFSLNQRLFCGFDDIYCVFLGTLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
             D P     RLF   DDI+C+F G + NL  L +QYGL+K +NEA+ +IEAYRTLRDRG
Sbjct: 61  SLDNPDPRVPRLFAVVDDIFCLFQGHIENLPFLKQQYGLNKITNEAIIVIEAYRTLRDRG 120

Query: 121 PYPADQVLKDLDGSFAFVVYDSRAGTVFAA 151
           PYP D+V++D  G FAF+++DS   TVFAA
Sbjct: 121 PYPVDKVVRDFHGKFAFILFDSVKKTVFAA 147

The following BLAST results are available for this feature:

BLAST of Sed0021321.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139643.1	1.6e-75	90.07	stem-specific protein TSJT1-like [Momordica charantia]	[more]
XP_022940896.1	1.9e-73	87.42	stem-specific protein TSJT1-like [Cucurbita moschata]	[more]
KAG6607868.1	3.3e-73	87.42	LanC-like protein GCR2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6591974.1	5.6e-73	88.16	Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981300.1	5.6e-73	87.42	stem-specific protein TSJT1-like [Cucurbita maxima]	[more]

BLAST of Sed0021321.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24805	9.1e-26	40.00	Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1	[more]

BLAST of Sed0021321.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG50	7.6e-76	90.07	stem-specific protein TSJT1-like OS=Momordica charantia OX=3673 GN=LOC111010495 ...	[more]
A0A6J1FJN8	9.3e-74	87.42	stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111446347 P...	[more]
A0A6J1IZ39	2.7e-73	87.42	stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111480473 PE=...	[more]
A0A6J1FE84	2.7e-73	88.16	stem-specific protein TSJT1 OS=Cucurbita moschata OX=3662 GN=LOC111443272 PE=4 S...	[more]
A0A6J1IH84	1.1e-71	86.84	stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111476923 PE=...	[more]

BLAST of Sed0021321.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27450.1	9.2e-66	75.82	Aluminium induced protein with YGL and LRDR motifs	[more]
AT3G15450.1	3.5e-57	70.13	Aluminium induced protein with YGL and LRDR motifs	[more]
AT3G15450.2	3.5e-57	70.13	Aluminium induced protein with YGL and LRDR motifs	[more]
AT3G15450.3	3.5e-57	70.13	Aluminium induced protein with YGL and LRDR motifs	[more]
AT5G43830.1	2.8e-30	46.00	Aluminium induced protein with YGL and LRDR motifs	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024286	Domain of unknown function DUF3700	SMART	SM01172	DUF3700_2	coord: 2..174 e-value: 1.1E-66 score: 237.5
IPR024286	Domain of unknown function DUF3700	PFAM	PF12481	DUF3700	coord: 2..152 e-value: 5.7E-59 score: 199.3
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 48..172 e-value: 2.7E-6 score: 28.8
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 70..158
None	No IPR available	PANTHER	PTHR45952:SF2	OS04G0679400 PROTEIN	coord: 1..159
IPR044828	Stem-specific protein TSJT1-like	PANTHER	PTHR45952	ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS	coord: 1..159

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0021321	Sed0021321	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021321.2-three_prime_utr	Sed0021321.2-three_prime_utr-LG05:37547156..37547714	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021321.2-exon	Sed0021321.2-exon-LG05:37547156..37548030	exon
Sed0021321.2-exon	Sed0021321.2-exon-LG05:37548697..37548965	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021321.2-cds	Sed0021321.2-cds-LG05:37547715..37548030	CDS
Sed0021321.2-cds	Sed0021321.2-cds-LG05:37548697..37548908	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021321.2-five_prime_utr	Sed0021321.2-five_prime_utr-LG05:37548909..37548965	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0021321.2	Sed0021321.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity