Sed0019437.2 (mRNA) Chayote v1

Overview


Name	Sed0019437.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG08: 5922688 .. 5926979 (-)
Sequence length	2698
RNA-Seq Expression	Sed0019437.2
Synteny	Sed0019437.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATAGTGGATAATAAAATGGAAGAAATGCAGAGTGAGAAACGGTTAATTATTGGCGCTCAAAGGTGTAAGATCAGAAGCAATTCTGAAATAGCAAAACAAGGAAGAAGAAGAAGAAGAAGAAGATCCATTTAGGTTTACAGAGGTGAGTTCTAAACCCTAACCCCACCTCTAATTCTTGTGGTTTCTTTCAATTCTTCTTTTTTCTGTTTCGTTTCAGGGATGAAATTTCAGATTCAGATTCAGATTCAGAAGGATGCTCTGCGATTTAGGGTTTGTATTTTATATGTCTTCTCTGTTCATGTCAGCTTTCTCAAAATTCCGCTCACTTTCCACGGCTTCTCGTTTTCTTTCGCCTAATCAAAAGCCCTACCAGGGAATTGAAGATTTTCATTTCAATTGTTTTTGCTCGTCCAGTTCTTGCCTGCCTCGTCCCATCCTTTTCCGCATTCCCGTGATGCGCTGCTTTCAATTCTCACTGTCTAATGCTGTCGCTCGGCGCAGGTTAGCGCAGCCTAAGAATTTCTTTCTTTTTTGATTAAACAACAAATGGCTTCTGGGGAAAGCTGGACGGAGACTCTCTTTGACTTGTCGGGGTGGTTGCCCACAAAAAGGTAAAATGAATTATATAATATATTATCAATAACATATCCTCAAATGTAGCAGATATTTATATATGTATTTTTTTGTTAATTAACCAAACAATTCTGTGTTTTTCTCTTTACGATGCTTCTGCTCCTCTCTGTTTGCTTCTTTATTTAATCCTGTCTTACCTTTTGTTTTTCCCTTCATTTTCTCTTCCTCACATGTTCACAGTAGTTGAGCAACGAACAGGGTTTTGACCCATTCTTGAAAGTTGAACGAGCTTTTGTTTCCTTACTGTGTTTCTTCTTCTTCTTTTGTTGCTGTGGTTTTTCTCATGCTTGTTGTGTGTTTCTCTTGAGTTTTTTCTGATGTCAATACCGTTAGAACATGATTATATAGGCTTAACAGAGGAGTCTGTTCCTTCCCAGGAAGGCTCTGAAAAGTCCAATGACAGACGAAACAATGCTGGGTTGAACCTTAAGGCCACGGAGCTGAGGTTGGGTCTGCCTGGTTTGGAGTCGCCGGTGAGGGACGATGGGCTCGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTTGCCATTGATAGAGCTTCTGCGAGGTGGGTTCTGCCTGCCTCTGCTGGCTCTGAGGCTGATTCCATAAAAAATGGGGGCCTGTTTTCTCCGAGAGGGGTTATTGAGAATGGAACTAAACCTCCTGTTTCGGCTGTTTGTGGTGCTAAAGAGGGTGTTTCTCCTTCGGCTAAGCCTCCGCTTTCTGCCCCTGCAGCCAAGTTTGTCTTCTCTTCCTTTTCTTTTTCCCTCTTTGATTTTCCCTTTTGACTAGACTCTGCTTGTTGATTTCTCTCCCTGCTTGTTCTGTTAAAAGTTCTTTTTAGCTTCTTCTACTTGAATGGGAATTTTGGGCTGTGAGTTCCATTATGTAGTTGTAGTCCTGTTAAATAAATTTTGGGCTGCTTGTTCTGTTAAAAAATAGAACTCTGCGTAGTGCATATAACTCTTTTGGTTCTGCTCGATGGGAAATCGTAAGCTTCTTCAGGAGTTCTCTTCTCTCTTGCCTTTCAATCCACCAGTTTAGACTTCATGACTCATGAGAGTATAATTGAACAGATTTATGTCAAGCTGTTTAACGTGGCTGATTTTTTTTTTTTTAGAGTTTTGATATGTTTACATGAAAACCTCTTTAACTTATCCCACCATGATAGCGTTTTTTTGTGTTGGATTTCATGATTCTAATGTAGTCGCTATTTCCTTCGAATCTCAAGTCCCTTTTCATGTCTGTTACAGGGCACAAGTTGTAGGATGGCCACCCATTCGCTCTTTTCGTAAGAATTCGATGGCAACACAGCCTCCTAAAAGTACAGATGATGCAGACGACAAGTTGGGATCAGGTTGCATCTATGTCAAGGTAAGTATGGATGGCGCACCATACCTCAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGTGGACCTATCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATCGGTATGCTCTTAATGGCTAGTCCTAAAGATCTTGGCTGAATCCCAACCCCCAAGGACTTCCAGGAATGGGGATGTTTTAGATTTGGATTCTTGGGAATTCATGTGAAGAATTCTTTGAGTAAGACGAATTAGGAAAATCCTTCATGTCTCTAAGATCAACAATTGATGAAATAAAGTTTGCGGTCAAGGTCATGGAGTTCTTGGCTTCACGGGCATGTCTCGAATGGGCCTATAATTGTATCATGACCAAGTCACTCGTATAAGTTGATAACTGTTGCTGATTTTTTAGGCTTTGCATGTTTAATTCTTTTCTCTAACTAAAACTAGAGACCTACTTGAAAGTCCTACACAGACATCTGTTTGGGAATTAGTTTATGTTGGTCAGTTACTCTCAAGTGTAGATTTTGTAGTTTGATAAAAAAAAAAGTGTAGATTTTGTAGTAAGGAATACTTCAATTAAAAGTGACTTTTTCTTTGCTATGGATCCCTTCATAAGGTCATTGTGGCTCCAACGGAGTTCCAAACCAGGATGCGTTAAATGAGAAGCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGATAAAGATGGCGATTGGATGCTTGTTGGTGATGTTCCATGGGAGTAAGTTCATTATTTACTCATTCGTGTTACATTAAAGTGGTTGCAGCTACAGTTTTTAACTGACTTCAAACTGGAATGCATTAATCCAATTTTAAGGGTTTGAAATCTTACTTTGGTACCACTATTTGAGAAATCACATTACAAGTAGCTGTTCTGAAAGTCTTACAACCTTTTTTAACTTGTGATCTTGAAGAAATTTGTTCTTTTAATTCTGACCAATATGGAGAATAAGAAAGACACCAACGTCACTGCAGTTAATTTTCTTTACTTCATCCAGACTTTTCTTGCAAAATTTCTATGCTTTTGTTCTCTATCTTGTCTTGTGTTATCAGAGGAATGTTTTGACTAATTTGTTCACCTCTTACATTCTAGAAAATCTTATTGTTTCAATCTTTTAATAATTGCTAAAAGAAGACTTCATCTTTATCTTGTACAATGTAGGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGGTATGCTATGCTATGAACTTTATTAATTTCTTAATTTTGTTGTTCATTGATATGAAATTTAAATCAGACAAGTTATAGTGGGATCTCGTCTCCATGATTATAAGCATTGAGAATATGGGCCTTCGTTCAGTGCTCTCTTAGTTACCATCATTATCTCTCCACTTCAAAAGCCTTTCAGAATTACTTAGCATCTTTCATTTTCATGAAGTTTGACCCCACCCCCAAAATAAAAAGATCAACTAATAAAAACATATTAGTTTAATTTCCATTATGATCGGATCTTTTCATAATCTGATGCTTGGCCATGCCATTACAAGGATGCTAATTCGTGATATGGATTGATCAATATCTTATATTGATAGCATCAGAATAAAAATGGAAATTTCTTTTTCCTCTGATGATCCCATTTGTATAAGATTGGTATTTTCTCTCTTTCTTTCTCTTGCAGCTCCAAGGGCCATGGAGAAATGCAAAAATCATAACTAGCAAACACATTCATGTTTGCTATATCGATGCATTGATCATGCACGTTAGAGCAAATGATGTTCGAAGATGACATCGCCGTGTAGGAAGTTAAGATCGATTGAGAGTGAATATTGTTCTCCTTTGTGCCCGAGTTCTAACTATTGGGGAGATGTTTCGAGACAACTTATTTGTGAGCAAAGACGATTTTCGATAGGACGATTTGCAGTTTCTTAGTTTGCCTCTCCCCCTCTTTGTGATTTTACTTTGGTTGTTGGTTGCTACACTTTACTTTGTATTGTAAATGGTTTGTTATCTATGGCAATTGTATCCTCACTCTTCATATTCTACCTGTTGCCTCCTGGTTTCTACCTCTGTCAGTTCAACTTCAAACTTCACAAAAGAGTTAAATTATGCAGTAATTTTGCCCTTGTGTCAATTTCATTTTTATATTCTAATTTTAACCATAAAAGTAGGAAGATGTGCCTTGGCTTTTATTTTATTGCTATGTTTTTTTAATTTAACAACAATTGGGGTGGAGTGTTTAAACTCATGAC

mRNA sequence

AGAAAATAGTGGATAATAAAATGGAAGAAATGCAGAGTGAGAAACGGTTAATTATTGGCGCTCAAAGGTGTAAGATCAGAAGCAATTCTGAAATAGCAAAACAAGGAAGAAGAAGAAGAAGAAGAAGATCCATTTAGGTTTACAGAGGTGAGTTCTAAACCCTAACCCCACCTCTAATTCTTGTGGTTTCTTTCAATTCTTCTTTTTTCTGTTTCGTTTCAGGGATGAAATTTCAGATTCAGATTCAGATTCAGAAGGATGCTCTGCGATTTAGGTTCTTGCCTGCCTCGTCCCATCCTTTTCCGCATTCCCGTGATGCGCTGCTTTCAATTCTCACTGTCTAATGCTGTCGCTCGGCGCAGGTTAGCGCAGCCTAAGAATTTCTTTCTTTTTTGATTAAACAACAAATGGCTTCTGGGGAAAGCTGGACGGAGACTCTCTTTGACTTGTCGGGGTGGTTGCCCACAAAAAGGTAAAATGAATTATATAATATATTATCAATAACATATCCTCAAATGTAGCAGATATTTATATATGTATTTTTTTGTTAATTAACCAAACAATTCTGTGTTTTTCTCTTTACGATGCTTCTGCTCCTCTCTGTTTGCTTCTTTATTTAATCCTGTCTTACCTTTTGTTTTTCCCTTCATTTTCTCTTCCTCACATGTTCACAGTAGTTGAGCAACGAACAGGGTTTTGACCCATTCTTGAAAGTTGAACGAGCTTTTGTTTCCTTACTGTGTTTCTTCTTCTTCTTTTGTTGCTGTGGTTTTTCTCATGCTTGTTGTGTGTTTCTCTTGAGTTTTTTCTGATGTCAATACCGTTAGAACATGATTATATAGGCTTAACAGAGGAGTCTGTTCCTTCCCAGGAAGGCTCTGAAAAGTCCAATGACAGACGAAACAATGCTGGGTTGAACCTTAAGGCCACGGAGCTGAGGTTGGGTCTGCCTGGTTTGGAGTCGCCGGTGAGGGACGATGGGCTCGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTTGCCATTGATAGAGCTTCTGCGAGGTGGGTTCTGCCTGCCTCTGCTGGCTCTGAGGCTGATTCCATAAAAAATGGGGGCCTGTTTTCTCCGAGAGGGGTTATTGAGAATGGAACTAAACCTCCTGTTTCGGCTGTTTGTGGTGCTAAAGAGGGTGTTTCTCCTTCGGCTAAGCCTCCGCTTTCTGCCCCTGCAGCCAAGGCACAAGTTGTAGGATGGCCACCCATTCGCTCTTTTCGTAAGAATTCGATGGCAACACAGCCTCCTAAAAGTACAGATGATGCAGACGACAAGTTGGGATCAGGTTGCATCTATGTCAAGGTAAGTATGGATGGCGCACCATACCTCAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGTGGACCTATCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATCGGTCATTGTGGCTCCAACGGAGTTCCAAACCAGGATGCGTTAAATGAGAAGCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGATAAAGATGGCGATTGGATGCTTGTTGGTGATGTTCCATGGGAGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGGTATGCTATGCTATGAACTTTATTAATTTCTTAATTTTGTTGTTCATTGATATGAAATTTAAATCAGACAAGTTATAGTGGGATCTCGTCTCCATGATTATAAGCATTGAGAATATGGGCCTTCGTTCAGTGCTCTCTTAGTTACCATCATTATCTCTCCACTTCAAAAGCCTTTCAGAATTACTTAGCATCTTTCATTTTCATGAAGTTTGACCCCACCCCCAAAATAAAAAGATCAACTAATAAAAACATATTAGTTTAATTTCCATTATGATCGGATCTTTTCATAATCTGATGCTTGGCCATGCCATTACAAGGATGCTAATTCGTGATATGGATTGATCAATATCTTATATTGATAGCATCAGAATAAAAATGGAAATTTCTTTTTCCTCTGATGATCCCATTTGTATAAGATTGGTATTTTCTCTCTTTCTTTCTCTTGCAGCTCCAAGGGCCATGGAGAAATGCAAAAATCATAACTAGCAAACACATTCATGTTTGCTATATCGATGCATTGATCATGCACGTTAGAGCAAATGATGTTCGAAGATGACATCGCCGTGTAGGAAGTTAAGATCGATTGAGAGTGAATATTGTTCTCCTTTGTGCCCGAGTTCTAACTATTGGGGAGATGTTTCGAGACAACTTATTTGTGAGCAAAGACGATTTTCGATAGGACGATTTGCAGTTTCTTAGTTTGCCTCTCCCCCTCTTTGTGATTTTACTTTGGTTGTTGGTTGCTACACTTTACTTTGTATTGTAAATGGTTTGTTATCTATGGCAATTGTATCCTCACTCTTCATATTCTACCTGTTGCCTCCTGGTTTCTACCTCTGTCAGTTCAACTTCAAACTTCACAAAAGAGTTAAATTATGCAGTAATTTTGCCCTTGTGTCAATTTCATTTTTATATTCTAATTTTAACCATAAAAGTAGGAAGATGTGCCTTGGCTTTTATTTTATTGCTATGTTTTTTTAATTTAACAACAATTGGGGTGGAGTGTTTAAACTCATGAC

Coding sequence (CDS)

ATGTCAATACCGTTAGAACATGATTATATAGGCTTAACAGAGGAGTCTGTTCCTTCCCAGGAAGGCTCTGAAAAGTCCAATGACAGACGAAACAATGCTGGGTTGAACCTTAAGGCCACGGAGCTGAGGTTGGGTCTGCCTGGTTTGGAGTCGCCGGTGAGGGACGATGGGCTCGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTTGCCATTGATAGAGCTTCTGCGAGGTGGGTTCTGCCTGCCTCTGCTGGCTCTGAGGCTGATTCCATAAAAAATGGGGGCCTGTTTTCTCCGAGAGGGGTTATTGAGAATGGAACTAAACCTCCTGTTTCGGCTGTTTGTGGTGCTAAAGAGGGTGTTTCTCCTTCGGCTAAGCCTCCGCTTTCTGCCCCTGCAGCCAAGGCACAAGTTGTAGGATGGCCACCCATTCGCTCTTTTCGTAAGAATTCGATGGCAACACAGCCTCCTAAAAGTACAGATGATGCAGACGACAAGTTGGGATCAGGTTGCATCTATGTCAAGGTAAGTATGGATGGCGCACCATACCTCAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGTGGACCTATCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATCGGTCATTGTGGCTCCAACGGAGTTCCAAACCAGGATGCGTTAAATGAGAAGCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGATAAAGATGGCGATTGGATGCTTGTTGGTGATGTTCCATGGGAGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGGTATGCTATGCTATGAACTTTATTAA

Protein sequence

MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLGMLCYELY

Homology

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BLAST of Sed0019437.2 vs. NCBI nr
Match: TYJ98063.1 (auxin-responsive protein IAA27 [Cucumis melo var. makuwa])

HSP 1 Score: 507.3 bits (1305), Expect = 9.0e-140
Identity = 258/296 (87.16%), Postives = 269/296 (90.88%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESPVRDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPVRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 295

[Close]

BLAST of Sed0019437.2 vs. NCBI nr
Match: XP_008462746.1 (PREDICTED: auxin-responsive protein IAA27 [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 5.8e-139
Identity = 257/296 (86.82%), Postives = 268/296 (90.54%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 295

[Close]

BLAST of Sed0019437.2 vs. NCBI nr
Match: XP_022987799.1 (auxin-responsive protein IAA27-like [Cucurbita maxima] >XP_022987802.1 auxin-responsive protein IAA27-like [Cucurbita maxima])

HSP 1 Score: 502.3 bits (1292), Expect = 2.9e-138
Identity = 253/295 (85.76%), Postives = 269/295 (91.19%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS PLEHDYIGLT ES+PSQE SE S+DR N+AGLNLKATELRLGLPG ESPVR DG++D
Sbjct: 1   MSTPLEHDYIGLT-ESIPSQETSETSSDRPNSAGLNLKATELRLGLPGSESPVRHDGVDD 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNGYP K+S+SGAKRGFSVAIDRASA+WVLP SAGSEADS KNGGLFSPRGV EN T+PP
Sbjct: 61  NNGYPHKTSISGAKRGFSVAIDRASAKWVLPTSAGSEADSTKNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
           VSAV G K+G+SPSA      KP LSAPAAKAQVVGWPPIRSFRKNSMATQPPK+T+DA+
Sbjct: 121 VSAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAE 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            K GSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNG PN+DA
Sbjct: 181 GKSGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGFPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 294

[Close]

BLAST of Sed0019437.2 vs. NCBI nr
Match: XP_038879206.1 (auxin-responsive protein IAA27 [Benincasa hispida])

HSP 1 Score: 501.9 bits (1291), Expect = 3.8e-138
Identity = 256/296 (86.49%), Postives = 266/296 (89.86%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS PLEHDYIGLT ESVPS E SEKS+DR NNAGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSTPLEHDYIGLT-ESVPSLESSEKSSDRHNNAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           N+G+  KSSVSGAKRGFSVAIDRASA+WVLPASAGSEADS KNGGLFSPRGV EN T+ P
Sbjct: 61  NSGFLHKSSVSGAKRGFSVAIDRASAKWVLPASAGSEADSSKNGGLFSPRGVNENKTQQP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVSGVKDGISPSAKPVLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTYGSY DLS ALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSLALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 295

[Close]

BLAST of Sed0019437.2 vs. NCBI nr
Match: XP_022144958.1 (auxin-responsive protein IAA27-like [Momordica charantia] >XP_022144959.1 auxin-responsive protein IAA27-like [Momordica charantia])

HSP 1 Score: 500.7 bits (1288), Expect = 8.4e-138
Identity = 254/295 (86.10%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS+PLEHDYIGLT ESVP  E SEKS+DRRNN GLNLKATELRLGLPG ESP RDDGLED
Sbjct: 1   MSMPLEHDYIGLT-ESVPPLESSEKSSDRRNNGGLNLKATELRLGLPGSESPRRDDGLED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNGYPLKSSVSGAKRGFSVAIDRASA+WVLP+SAGSEADS K GGLFSPR    N T+P 
Sbjct: 61  NNGYPLKSSVSGAKRGFSVAIDRASAKWVLPSSAGSEADSSKPGGLFSPRVNENNKTQPS 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
            +AV G K+G+SPSA      KP LSAPAAKAQVVGWPPIRSFRKNSMATQPPK+T+DAD
Sbjct: 121 STAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAD 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            KLGSGC+YVKVSMDGAPYLRKVDLKTYGSYV+LSSALEKMFSSFT+GHCGSNGVPN+DA
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYGSYVELSSALEKMFSSFTLGHCGSNGVPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 294

[Close]

BLAST of Sed0019437.2 vs. ExPASy Swiss-Prot
Match: Q9ZSY8 (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.4e-73
Identity = 172/308 (55.84%), Postives = 203/308 (65.91%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEG---SEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDG 60
           +S+  EHDYIGL+E   P+ E    S+K+  R NN GLN KATELRLGLPG ESP R D 
Sbjct: 3   VSVAAEHDYIGLSE--FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVDS 62

Query: 61  --LEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPR-GVIE 120
             L  N        VSGAKR FS AI+  S +WV    + +    + +G    PR  V++
Sbjct: 63  RFLALNKS---SCPVSGAKRVFSDAIN-DSNKWVFSPGSTTATGDVGSGS--GPRTSVVK 122

Query: 121 NG-----TKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMA---TQP 180
           +G     TKP V              K   +APA+KAQVVGWPPIRSFRKNSMA   +Q 
Sbjct: 123 DGKSTTFTKPAVPV---------KEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQK 182

Query: 181 P---KSTDDADDKLG--SGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTI 240
           P     T++A+ K G    C+YVKVSM+GAPYLRK+DLKTY SY++LSSALEKMFS FTI
Sbjct: 183 PGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTI 242

Query: 241 GHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIM 290
           G  GS+G   +D LNE RL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++RIM
Sbjct: 243 GQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIM 293

[Close]

BLAST of Sed0019437.2 vs. ExPASy Swiss-Prot
Match: Q38827 (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-66
Identity = 148/305 (48.52%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 6   EHDYIGLTE-ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPG +SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNG 125
            L++   +PL            K++ SG KRGFS  +D+        A A S   + KN 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-------AEAKSSVYTEKN- 152

Query: 126 GLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMAT 185
            +F      ++ TK  V       +G S +     S PAAKAQ+VGWPP+RS+RKN++AT
Sbjct: 153 WMFPEAAATQSVTKKDVPQ--NIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT 212

Query: 186 QPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHC 245
              K++D+ D + GSG ++VKVSMDGAPYLRKVDL++Y +Y +LSSALEKMF++FT+G C
Sbjct: 213 -TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC 272

Query: 246 GSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSS 290
           GSNG   +D L+E +L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C +++IMK  
Sbjct: 273 GSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGC 324

[Close]

BLAST of Sed0019437.2 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.6e-65
Identity = 154/312 (49.36%), Postives = 193/312 (61.86%), Query Frame = 0


Query: 6   EHDYIGLTE------ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVR--DDG 65
           E +Y+GL++       ++P+  G  KSN       LN KATELRLGLP  +SP R  D G
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVG--KSN-------LNFKATELRLGLPESQSPERETDFG 80

Query: 66  L------EDNNGYPL-------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEA 125
           L      ++   +PL             K+ VSG KRGF              A    E 
Sbjct: 81  LLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGF--------------ADTWDEF 140

Query: 126 DSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPL-SAPAAKAQVVGWPPIRSF 185
             +K  G   P G I     P V  V  + +     AK  L +APAAKAQVVGWPPIRS+
Sbjct: 141 SGVK--GSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSY 200

Query: 186 RKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFS 245
           RKN+MA+   K+TD+ D K G G ++VKVSMDGAPYLRKVDL+TY SY  LSSALEKMFS
Sbjct: 201 RKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS 260

Query: 246 SFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTR 290
            FT+G CG +G   ++ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +
Sbjct: 261 CFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 307

[Close]

BLAST of Sed0019437.2 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-61
Identity = 143/276 (51.81%), Postives = 170/276 (61.59%), Query Frame = 0


Query: 33  AGLNLKATELRLGLPGLESPVRDDGLEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPA 92
           A L  +ATELRLGLPG        G  D +     +  S  KRGF+  ID      + PA
Sbjct: 3   ADLAFEATELRLGLPG--------GGGDGDAAAAAARSSSGKRGFAETIDLKLK--LEPA 62

Query: 93  SAGSEADSIKNGGLFSPR-------GVIENGTKPPVSAVCG------AKEGVSPSAKPPL 152
           +A  + D  K       R       G   +   PP +A  G      ++  V  +A  P 
Sbjct: 63  AAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPE 122

Query: 153 SAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD---DKLGSG---CIYVKVSMDGAPY 212
              A KAQVVGWPP+RS+RKN +A Q  K  D AD   DK G+G     +VKVSMDGAPY
Sbjct: 123 KPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPY 182

Query: 213 LRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTY 272
           LRKVDLK Y SY++LS ALEKMFSSFTIG+CGS+GV   + +NE ++ DLL+GSEYV TY
Sbjct: 183 LRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTY 242

Query: 273 EDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           EDKDGDWMLVGDVPWEMF ESC R+RIMK SEAIGL
Sbjct: 243 EDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGL 265

[Close]

BLAST of Sed0019437.2 vs. ExPASy Swiss-Prot
Match: Q5Z749 (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.8e-59
Identity = 147/298 (49.33%), Postives = 169/298 (56.71%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGL--ESPVRDDGL 60
           M+ P E DYIGL+                   A     ATELRLGLPG   E+     G 
Sbjct: 1   MAPPQERDYIGLSP------------------AAAAALATELRLGLPGTAEEAESEGGGG 60

Query: 61  EDNNGYPLKSSV---SGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIEN 120
              +  PL   +    GAKRGF+ AI         PA    EA     GG          
Sbjct: 61  GGTDAAPLTLELLPKGGAKRGFADAIVGG------PAGQRREA----AGG---------- 120

Query: 121 GTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMATQPP--KSTDDA 180
                  A   A E      K    APAAKAQVVGWPPIRS+RKN+MA   P  K  DD 
Sbjct: 121 ------KAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDG 180

Query: 181 DDKL--GSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPN 240
           + K    SGC+YVKVSMDGAPYLRKVDLK Y +Y +LS ALEKMFS FT+GH  SNG   
Sbjct: 181 EAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSG 240

Query: 241 QDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           +D L++ RLMDL +G+E VLTYEDKD DWMLVGDVPW MFT+SC R+RIMK S+A+GL
Sbjct: 241 RDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGL 254

[Close]

BLAST of Sed0019437.2 vs. ExPASy TrEMBL
Match: A0A5D3BFM3 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00160 PE=3 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.4e-140
Identity = 258/296 (87.16%), Postives = 269/296 (90.88%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESPVRDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPVRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 295

[Close]

BLAST of Sed0019437.2 vs. ExPASy TrEMBL
Match: A0A1S3CHQ1 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.8e-139
Identity = 257/296 (86.82%), Postives = 268/296 (90.54%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 295

[Close]

BLAST of Sed0019437.2 vs. ExPASy TrEMBL
Match: A0A6J1JBD0 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485238 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.4e-138
Identity = 253/295 (85.76%), Postives = 269/295 (91.19%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS PLEHDYIGLT ES+PSQE SE S+DR N+AGLNLKATELRLGLPG ESPVR DG++D
Sbjct: 1   MSTPLEHDYIGLT-ESIPSQETSETSSDRPNSAGLNLKATELRLGLPGSESPVRHDGVDD 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNGYP K+S+SGAKRGFSVAIDRASA+WVLP SAGSEADS KNGGLFSPRGV EN T+PP
Sbjct: 61  NNGYPHKTSISGAKRGFSVAIDRASAKWVLPTSAGSEADSTKNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
           VSAV G K+G+SPSA      KP LSAPAAKAQVVGWPPIRSFRKNSMATQPPK+T+DA+
Sbjct: 121 VSAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAE 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            K GSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNG PN+DA
Sbjct: 181 GKSGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGFPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 294

[Close]

BLAST of Sed0019437.2 vs. ExPASy TrEMBL
Match: A0A6J1CTT1 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014504 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 4.1e-138
Identity = 254/295 (86.10%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS+PLEHDYIGLT ESVP  E SEKS+DRRNN GLNLKATELRLGLPG ESP RDDGLED
Sbjct: 1   MSMPLEHDYIGLT-ESVPPLESSEKSSDRRNNGGLNLKATELRLGLPGSESPRRDDGLED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNGYPLKSSVSGAKRGFSVAIDRASA+WVLP+SAGSEADS K GGLFSPR    N T+P 
Sbjct: 61  NNGYPLKSSVSGAKRGFSVAIDRASAKWVLPSSAGSEADSSKPGGLFSPRVNENNKTQPS 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
            +AV G K+G+SPSA      KP LSAPAAKAQVVGWPPIRSFRKNSMATQPPK+T+DAD
Sbjct: 121 STAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAD 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            KLGSGC+YVKVSMDGAPYLRKVDLKTYGSYV+LSSALEKMFSSFT+GHCGSNGVPN+DA
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYGSYVELSSALEKMFSSFTLGHCGSNGVPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 294

[Close]

BLAST of Sed0019437.2 vs. ExPASy TrEMBL
Match: A0A5A7V6M0 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001240 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 6.9e-138
Identity = 257/297 (86.53%), Postives = 268/297 (90.24%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIG-HCGSNGVPNQ 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIG HCGSNGVPN+
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGSHCGSNGVPNR 240

Query: 241 DALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 290
           DALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL
Sbjct: 241 DALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGL 296

[Close]

BLAST of Sed0019437.2 vs. TAIR 10
Match: AT4G29080.1 (phytochrome-associated protein 2 )

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-74
Identity = 172/308 (55.84%), Postives = 203/308 (65.91%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEG---SEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDG 60
           +S+  EHDYIGL+E   P+ E    S+K+  R NN GLN KATELRLGLPG ESP R D 
Sbjct: 3   VSVAAEHDYIGLSE--FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVDS 62

Query: 61  --LEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPR-GVIE 120
             L  N        VSGAKR FS AI+  S +WV    + +    + +G    PR  V++
Sbjct: 63  RFLALNKS---SCPVSGAKRVFSDAIN-DSNKWVFSPGSTTATGDVGSGS--GPRTSVVK 122

Query: 121 NG-----TKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMA---TQP 180
           +G     TKP V              K   +APA+KAQVVGWPPIRSFRKNSMA   +Q 
Sbjct: 123 DGKSTTFTKPAVPV---------KEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQK 182

Query: 181 P---KSTDDADDKLG--SGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTI 240
           P     T++A+ K G    C+YVKVSM+GAPYLRK+DLKTY SY++LSSALEKMFS FTI
Sbjct: 183 PGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTI 242

Query: 241 GHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIM 290
           G  GS+G   +D LNE RL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++RIM
Sbjct: 243 GQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIM 293

[Close]

BLAST of Sed0019437.2 vs. TAIR 10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 148/305 (48.52%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 6   EHDYIGLTE-ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPG +SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNG 125
            L++   +PL            K++ SG KRGFS  +D+        A A S   + KN 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-------AEAKSSVYTEKN- 152

Query: 126 GLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMAT 185
            +F      ++ TK  V       +G S +     S PAAKAQ+VGWPP+RS+RKN++AT
Sbjct: 153 WMFPEAAATQSVTKKDVPQ--NIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT 212

Query: 186 QPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHC 245
              K++D+ D + GSG ++VKVSMDGAPYLRKVDL++Y +Y +LSSALEKMF++FT+G C
Sbjct: 213 -TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC 272

Query: 246 GSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSS 290
           GSNG   +D L+E +L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C +++IMK  
Sbjct: 273 GSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGC 324

[Close]

BLAST of Sed0019437.2 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 148/305 (48.52%), Postives = 198/305 (64.92%), Query Frame = 0


Query: 6   EHDYIGLTE-ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPG +SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNG 125
            L++   +PL            K++ SG KRGFS  +D+        A A S   + KN 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-------AEAKSSVYTEKN- 152

Query: 126 GLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMAT 185
            +F      ++ TK  V       +G S +     S PAAKAQ+VGWPP+RS+RKN++AT
Sbjct: 153 WMFPEAAATQSVTKKDVPQ--NIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT 212

Query: 186 QPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHC 245
              K++D+ D + GSG ++VKVSMDGAPYLRKVDL++Y +Y +LSSALEKMF++FT+G C
Sbjct: 213 -TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC 272

Query: 246 GSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSS 290
           GSNG   +D L+E +L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C +++IMK  
Sbjct: 273 GSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGC 324

[Close]

BLAST of Sed0019437.2 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 252.7 bits (644), Expect = 3.7e-67
Identity = 155/313 (49.52%), Postives = 194/313 (61.98%), Query Frame = 0


Query: 6   EHDYIGLTE------ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVR--DDG 65
           E +Y+GL++       ++P+  G  KSN       LN KATELRLGLP  +SP R  D G
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVG--KSN-------LNFKATELRLGLPESQSPERETDFG 80

Query: 66  L------EDNNGYPL-------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEA 125
           L      ++   +PL             K+ VSG KRGF              A    E 
Sbjct: 81  LLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGF--------------ADTWDEF 140

Query: 126 DSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPL-SAPAAKAQVVGWPPIRSF 185
             +K  G   P G I     P V  V  + +     AK  L +APAAKAQVVGWPPIRS+
Sbjct: 141 SGVK--GSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSY 200

Query: 186 RKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFS 245
           RKN+MA+   K+TD+ D K G G ++VKVSMDGAPYLRKVDL+TY SY  LSSALEKMFS
Sbjct: 201 RKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS 260

Query: 246 SFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTR 291
            FT+G CG +G   ++ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +
Sbjct: 261 CFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 308

[Close]

BLAST of Sed0019437.2 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-66
Identity = 154/312 (49.36%), Postives = 193/312 (61.86%), Query Frame = 0


Query: 6   EHDYIGLTE------ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVR--DDG 65
           E +Y+GL++       ++P+  G  KSN       LN KATELRLGLP  +SP R  D G
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVG--KSN-------LNFKATELRLGLPESQSPERETDFG 80

Query: 66  L------EDNNGYPL-------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEA 125
           L      ++   +PL             K+ VSG KRGF              A    E 
Sbjct: 81  LLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGF--------------ADTWDEF 140

Query: 126 DSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPL-SAPAAKAQVVGWPPIRSF 185
             +K  G   P G I     P V  V  + +     AK  L +APAAKAQVVGWPPIRS+
Sbjct: 141 SGVK--GSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSY 200

Query: 186 RKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFS 245
           RKN+MA+   K+TD+ D K G G ++VKVSMDGAPYLRKVDL+TY SY  LSSALEKMFS
Sbjct: 201 RKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS 260

Query: 246 SFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTR 290
            FT+G CG +G   ++ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +
Sbjct: 261 CFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 307

The following BLAST results are available for this feature:

BLAST of Sed0019437.2 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98063.1	9.0e-140	87.16	auxin-responsive protein IAA27 [Cucumis melo var. makuwa]	[more]
XP_008462746.1	5.8e-139	86.82	PREDICTED: auxin-responsive protein IAA27 [Cucumis melo]	[more]
XP_022987799.1	2.9e-138	85.76	auxin-responsive protein IAA27-like [Cucurbita maxima] >XP_022987802.1 auxin-res...	[more]
XP_038879206.1	3.8e-138	86.49	auxin-responsive protein IAA27 [Benincasa hispida]	[more]
XP_022144958.1	8.4e-138	86.10	auxin-responsive protein IAA27-like [Momordica charantia] >XP_022144959.1 auxin-...	[more]

BLAST of Sed0019437.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSY8	3.4e-73	55.84	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=...	[more]
Q38827	1.8e-66	48.52	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
Q38826	2.6e-65	49.36	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]
P0C132	1.7e-61	51.81	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]
Q5Z749	2.8e-59	49.33	Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21...	[more]

BLAST of Sed0019437.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFM3	4.4e-140	87.16	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CHQ1	2.8e-139	86.82	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1	[more]
A0A6J1JBD0	1.4e-138	85.76	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485238 PE=3 SV=1	[more]
A0A6J1CTT1	4.1e-138	86.10	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014504 PE=3 SV=...	[more]
A0A5A7V6M0	6.9e-138	86.53	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Sed0019437.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29080.1	2.4e-74	55.84	phytochrome-associated protein 2	[more]
AT5G65670.1	1.3e-67	48.52	indole-3-acetic acid inducible 9	[more]
AT5G65670.2	1.3e-67	48.52	indole-3-acetic acid inducible 9	[more]
AT2G22670.2	3.7e-67	49.52	indoleacetic acid-induced protein 8	[more]
AT2G22670.1	1.8e-66	49.36	indoleacetic acid-induced protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 176..294 e-value: 6.3E-43 score: 147.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR31734:SF157	AUXIN-RESPONSIVE PROTEIN	coord: 5..292
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 179..282
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 40..290 e-value: 3.6E-83 score: 279.1
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 5..292
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 181..283 score: 24.618954

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0019437	Sed0019437	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019437.2-exon	Sed0019437.2-exon-LG08:5922688..5923768	exon
Sed0019437.2-exon	Sed0019437.2-exon-LG08:5924210..5924351	exon
Sed0019437.2-exon	Sed0019437.2-exon-LG08:5924847..5925076	exon
Sed0019437.2-exon	Sed0019437.2-exon-LG08:5925591..5926560	exon
Sed0019437.2-exon	Sed0019437.2-exon-LG08:5926705..5926979	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019437.2-three_prime_utr	Sed0019437.2-three_prime_utr-LG08:5922688..5923680	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019437.2-cds	Sed0019437.2-cds-LG08:5923681..5923768	CDS
Sed0019437.2-cds	Sed0019437.2-cds-LG08:5924210..5924351	CDS
Sed0019437.2-cds	Sed0019437.2-cds-LG08:5924847..5925076	CDS
Sed0019437.2-cds	Sed0019437.2-cds-LG08:5925591..5926024	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019437.2-five_prime_utr	Sed0019437.2-five_prime_utr-LG08:5926025..5926560	five_prime_UTR
Sed0019437.2-five_prime_utr	Sed0019437.2-five_prime_utr-LG08:5926705..5926979	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0019437.2	Sed0019437.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding