Sed0019437 (gene) Chayote v1

Overview


Name	Sed0019437
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG08: 5922688 .. 5926979 (-)
RNA-Seq Expression	Sed0019437
Synteny	Sed0019437

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATAGTGGATAATAAAATGGAAGAAATGCAGAGTGAGAAACGGTTAATTATTGGCGCTCAAAGGTGTAAGATCAGAAGCAATTCTGAAATAGCAAAACAAGGAAGAAGAAGAAGAAGAAGAAGATCCATTTAGGTTTACAGAGGTGAGTTCTAAACCCTAACCCCACCTCTAATTCTTGTGGTTTCTTTCAATTCTTCTTTTTTCTGTTTCGTTTCAGGGATGAAATTTCAGATTCAGATTCAGATTCAGAAGGATGCTCTGCGATTTAGGGTTTGTATTTTATATGTCTTCTCTGTTCATGTCAGCTTTCTCAAAATTCCGCTCACTTTCCACGGCTTCTCGTTTTCTTTCGCCTAATCAAAAGCCCTACCAGGGAATTGAAGATTTTCATTTCAATTGTTTTTGCTCGTCCAGTTCTTGCCTGCCTCGTCCCATCCTTTTCCGCATTCCCGTGATGCGCTGCTTTCAATTCTCACTGTCTAATGCTGTCGCTCGGCGCAGGTTAGCGCAGCCTAAGAATTTCTTTCTTTTTTGATTAAACAACAAATGGCTTCTGGGGAAAGCTGGACGGAGACTCTCTTTGACTTGTCGGGGTGGTTGCCCACAAAAAGGTAAAATGAATTATATAATATATTATCAATAACATATCCTCAAATGTAGCAGATATTTATATATGTATTTTTTTGTTAATTAACCAAACAATTCTGTGTTTTTCTCTTTACGATGCTTCTGCTCCTCTCTGTTTGCTTCTTTATTTAATCCTGTCTTACCTTTTGTTTTTCCCTTCATTTTCTCTTCCTCACATGTTCACAGTAGTTGAGCAACGAACAGGGTTTTGACCCATTCTTGAAAGTTGAACGAGCTTTTGTTTCCTTACTGTGTTTCTTCTTCTTCTTTTGTTGCTGTGGTTTTTCTCATGCTTGTTGTGTGTTTCTCTTGAGTTTTTTCTGATGTCAATACCGTTAGAACATGATTATATAGGCTTAACAGAGGAGTCTGTTCCTTCCCAGGAAGGCTCTGAAAAGTCCAATGACAGACGAAACAATGCTGGGTTGAACCTTAAGGCCACGGAGCTGAGGTTGGGTCTGCCTGGTTTGGAGTCGCCGGTGAGGGACGATGGGCTCGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTTGCCATTGATAGAGCTTCTGCGAGGTGGGTTCTGCCTGCCTCTGCTGGCTCTGAGGCTGATTCCATAAAAAATGGGGGCCTGTTTTCTCCGAGAGGGGTTATTGAGAATGGAACTAAACCTCCTGTTTCGGCTGTTTGTGGTGCTAAAGAGGGTGTTTCTCCTTCGGCTAAGCCTCCGCTTTCTGCCCCTGCAGCCAAGTTTGTCTTCTCTTCCTTTTCTTTTTCCCTCTTTGATTTTCCCTTTTGACTAGACTCTGCTTGTTGATTTCTCTCCCTGCTTGTTCTGTTAAAAGTTCTTTTTAGCTTCTTCTACTTGAATGGGAATTTTGGGCTGTGAGTTCCATTATGTAGTTGTAGTCCTGTTAAATAAATTTTGGGCTGCTTGTTCTGTTAAAAAATAGAACTCTGCGTAGTGCATATAACTCTTTTGGTTCTGCTCGATGGGAAATCGTAAGCTTCTTCAGGAGTTCTCTTCTCTCTTGCCTTTCAATCCACCAGTTTAGACTTCATGACTCATGAGAGTATAATTGAACAGATTTATGTCAAGCTGTTTAACGTGGCTGATTTTTTTTTTTTTAGAGTTTTGATATGTTTACATGAAAACCTCTTTAACTTATCCCACCATGATAGCGTTTTTTTGTGTTGGATTTCATGATTCTAATGTAGTCGCTATTTCCTTCGAATCTCAAGTCCCTTTTCATGTCTGTTACAGGGCACAAGTTGTAGGATGGCCACCCATTCGCTCTTTTCGTAAGAATTCGATGGCAACACAGCCTCCTAAAAGTACAGATGATGCAGACGACAAGTTGGGATCAGGTTGCATCTATGTCAAGGTAAGTATGGATGGCGCACCATACCTCAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGTGGACCTATCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATCGGTATGCTCTTAATGGCTAGTCCTAAAGATCTTGGCTGAATCCCAACCCCCAAGGACTTCCAGGAATGGGGATGTTTTAGATTTGGATTCTTGGGAATTCATGTGAAGAATTCTTTGAGTAAGACGAATTAGGAAAATCCTTCATGTCTCTAAGATCAACAATTGATGAAATAAAGTTTGCGGTCAAGGTCATGGAGTTCTTGGCTTCACGGGCATGTCTCGAATGGGCCTATAATTGTATCATGACCAAGTCACTCGTATAAGTTGATAACTGTTGCTGATTTTTTAGGCTTTGCATGTTTAATTCTTTTCTCTAACTAAAACTAGAGACCTACTTGAAAGTCCTACACAGACATCTGTTTGGGAATTAGTTTATGTTGGTCAGTTACTCTCAAGTGTAGATTTTGTAGTTTGATAAAAAAAAAAGTGTAGATTTTGTAGTAAGGAATACTTCAATTAAAAGTGACTTTTTCTTTGCTATGGATCCCTTCATAAGGTCATTGTGGCTCCAACGGAGTTCCAAACCAGGATGCGTTAAATGAGAAGCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGATAAAGATGGCGATTGGATGCTTGTTGGTGATGTTCCATGGGAGTAAGTTCATTATTTACTCATTCGTGTTACATTAAAGTGGTTGCAGCTACAGTTTTTAACTGACTTCAAACTGGAATGCATTAATCCAATTTTAAGGGTTTGAAATCTTACTTTGGTACCACTATTTGAGAAATCACATTACAAGTAGCTGTTCTGAAAGTCTTACAACCTTTTTTAACTTGTGATCTTGAAGAAATTTGTTCTTTTAATTCTGACCAATATGGAGAATAAGAAAGACACCAACGTCACTGCAGTTAATTTTCTTTACTTCATCCAGACTTTTCTTGCAAAATTTCTATGCTTTTGTTCTCTATCTTGTCTTGTGTTATCAGAGGAATGTTTTGACTAATTTGTTCACCTCTTACATTCTAGAAAATCTTATTGTTTCAATCTTTTAATAATTGCTAAAAGAAGACTTCATCTTTATCTTGTACAATGTAGGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGGTATGCTATGCTATGAACTTTATTAATTTCTTAATTTTGTTGTTCATTGATATGAAATTTAAATCAGACAAGTTATAGTGGGATCTCGTCTCCATGATTATAAGCATTGAGAATATGGGCCTTCGTTCAGTGCTCTCTTAGTTACCATCATTATCTCTCCACTTCAAAAGCCTTTCAGAATTACTTAGCATCTTTCATTTTCATGAAGTTTGACCCCACCCCCAAAATAAAAAGATCAACTAATAAAAACATATTAGTTTAATTTCCATTATGATCGGATCTTTTCATAATCTGATGCTTGGCCATGCCATTACAAGGATGCTAATTCGTGATATGGATTGATCAATATCTTATATTGATAGCATCAGAATAAAAATGGAAATTTCTTTTTCCTCTGATGATCCCATTTGTATAAGATTGGTATTTTCTCTCTTTCTTTCTCTTGCAGCTCCAAGGGCCATGGAGAAATGCAAAAATCATAACTAGCAAACACATTCATGTTTGCTATATCGATGCATTGATCATGCACGTTAGAGCAAATGATGTTCGAAGATGACATCGCCGTGTAGGAAGTTAAGATCGATTGAGAGTGAATATTGTTCTCCTTTGTGCCCGAGTTCTAACTATTGGGGAGATGTTTCGAGACAACTTATTTGTGAGCAAAGACGATTTTCGATAGGACGATTTGCAGTTTCTTAGTTTGCCTCTCCCCCTCTTTGTGATTTTACTTTGGTTGTTGGTTGCTACACTTTACTTTGTATTGTAAATGGTTTGTTATCTATGGCAATTGTATCCTCACTCTTCATATTCTACCTGTTGCCTCCTGGTTTCTACCTCTGTCAGTTCAACTTCAAACTTCACAAAAGAGTTAAATTATGCAGTAATTTTGCCCTTGTGTCAATTTCATTTTTATATTCTAATTTTAACCATAAAAGTAGGAAGATGTGCCTTGGCTTTTATTTTATTGCTATGTTTTTTTAATTTAACAACAATTGGGGTGGAGTGTTTAAACTCATGAC

mRNA sequence

AGAAAATAGTGGATAATAAAATGGAAGAAATGCAGAGTGAGAAACGGTTAATTATTGGCGCTCAAAGGTGTAAGATCAGAAGCAATTCTGAAATAGCAAAACAAGGAAGAAGAAGAAGAAGAAGAAGATCCATTTAGGTTTACAGAGGTGAGTTCTAAACCCTAACCCCACCTCTAATTCTTGTGGTTTCTTTCAATTCTTCTTTTTTCTGTTTCGTTTCAGGGATGAAATTTCAGATTCAGATTCAGATTCAGAAGGATGCTCTGCGATTTAGGTTCTTGCCTGCCTCGTCCCATCCTTTTCCGCATTCCCGTGATGCGCTGCTTTCAATTCTCACTGTCTAATGCTGTCGCTCGGCGCAGGTTAGCGCAGCCTAAGAATTTCTTTCTTTTTTGATTAAACAACAAATGGCTTCTGGGGAAAGCTGGACGGAGACTCTCTTTGACTTGTCGGGGTGGTTGCCCACAAAAAGGTAAAATGAATTATATAATATATTATCAATAACATATCCTCAAATGTAGCAGATATTTATATATGTATTTTTTTGTTAATTAACCAAACAATTCTGTGTTTTTCTCTTTACGATGCTTCTGCTCCTCTCTGTTTGCTTCTTTATTTAATCCTGTCTTACCTTTTGTTTTTCCCTTCATTTTCTCTTCCTCACATGTTCACAGTAGTTGAGCAACGAACAGGGTTTTGACCCATTCTTGAAAGTTGAACGAGCTTTTGTTTCCTTACTGTGTTTCTTCTTCTTCTTTTGTTGCTGTGGTTTTTCTCATGCTTGTTGTGTGTTTCTCTTGAGTTTTTTCTGATGTCAATACCGTTAGAACATGATTATATAGGCTTAACAGAGGAGTCTGTTCCTTCCCAGGAAGGCTCTGAAAAGTCCAATGACAGACGAAACAATGCTGGGTTGAACCTTAAGGCCACGGAGCTGAGGTTGGGTCTGCCTGGTTTGGAGTCGCCGGTGAGGGACGATGGGCTCGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTTGCCATTGATAGAGCTTCTGCGAGGTGGGTTCTGCCTGCCTCTGCTGGCTCTGAGGCTGATTCCATAAAAAATGGGGGCCTGTTTTCTCCGAGAGGGGTTATTGAGAATGGAACTAAACCTCCTGTTTCGGCTGTTTGTGGTGCTAAAGAGGGTGTTTCTCCTTCGGCTAAGCCTCCGCTTTCTGCCCCTGCAGCCAAGGCACAAGTTGTAGGATGGCCACCCATTCGCTCTTTTCGTAAGAATTCGATGGCAACACAGCCTCCTAAAAGTACAGATGATGCAGACGACAAGTTGGGATCAGGTTGCATCTATGTCAAGGTAAGTATGGATGGCGCACCATACCTCAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGTGGACCTATCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATCGGTCATTGTGGCTCCAACGGAGTTCCAAACCAGGATGCGTTAAATGAGAAGCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGATAAAGATGGCGATTGGATGCTTGTTGGTGATGTTCCATGGGAGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGCTCCAAGGGCCATGGAGAAATGCAAAAATCATAACTAGCAAACACATTCATGTTTGCTATATCGATGCATTGATCATGCACGTTAGAGCAAATGATGTTCGAAGATGACATCGCCGTGTAGGAAGTTAAGATCGATTGAGAGTGAATATTGTTCTCCTTTGTGCCCGAGTTCTAACTATTGGGGAGATGTTTCGAGACAACTTATTTGTGAGCAAAGACGATTTTCGATAGGACGATTTGCAGTTTCTTAGTTTGCCTCTCCCCCTCTTTGTGATTTTACTTTGGTTGTTGGTTGCTACACTTTACTTTGTATTGTAAATGGTTTGTTATCTATGGCAATTGTATCCTCACTCTTCATATTCTACCTGTTGCCTCCTGGTTTCTACCTCTGTCAGTTCAACTTCAAACTTCACAAAAGAGTTAAATTATGCAGTAATTTTGCCCTTGTGTCAATTTCATTTTTATATTCTAATTTTAACCATAAAAGTAGGAAGATGTGCCTTGGCTTTTATTTTATTGCTATGTTTTTTTAATTTAACAACAATTGGGGTGGAGTGTTTAAACTCATGAC

Coding sequence (CDS)

ATGTCAATACCGTTAGAACATGATTATATAGGCTTAACAGAGGAGTCTGTTCCTTCCCAGGAAGGCTCTGAAAAGTCCAATGACAGACGAAACAATGCTGGGTTGAACCTTAAGGCCACGGAGCTGAGGTTGGGTCTGCCTGGTTTGGAGTCGCCGGTGAGGGACGATGGGCTCGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCCGGGGCCAAGAGGGGTTTCTCTGTTGCCATTGATAGAGCTTCTGCGAGGTGGGTTCTGCCTGCCTCTGCTGGCTCTGAGGCTGATTCCATAAAAAATGGGGGCCTGTTTTCTCCGAGAGGGGTTATTGAGAATGGAACTAAACCTCCTGTTTCGGCTGTTTGTGGTGCTAAAGAGGGTGTTTCTCCTTCGGCTAAGCCTCCGCTTTCTGCCCCTGCAGCCAAGGCACAAGTTGTAGGATGGCCACCCATTCGCTCTTTTCGTAAGAATTCGATGGCAACACAGCCTCCTAAAAGTACAGATGATGCAGACGACAAGTTGGGATCAGGTTGCATCTATGTCAAGGTAAGTATGGATGGCGCACCATACCTCAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGTGGACCTATCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATCGGTCATTGTGGCTCCAACGGAGTTCCAAACCAGGATGCGTTAAATGAGAAGCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGATAAAGATGGCGATTGGATGCTTGTTGGTGATGTTCCATGGGAGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGCTCCAAGGGCCATGGAGAAATGCAAAAATCATAACTAG

Protein sequence

MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNHN

Homology

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BLAST of Sed0019437 vs. NCBI nr
Match: TYJ98063.1 (auxin-responsive protein IAA27 [Cucumis melo var. makuwa])

HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146
Identity = 269/308 (87.34%), Postives = 280/308 (90.91%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESPVRDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPVRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300

Query: 301 MEKCKNHN 302
           MEKCKN N
Sbjct: 301 MEKCKNRN 307

[Close]

BLAST of Sed0019437 vs. NCBI nr
Match: XP_008462746.1 (PREDICTED: auxin-responsive protein IAA27 [Cucumis melo])

HSP 1 Score: 527.3 bits (1357), Expect = 8.5e-146
Identity = 268/308 (87.01%), Postives = 279/308 (90.58%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300

Query: 301 MEKCKNHN 302
           MEKCKN N
Sbjct: 301 MEKCKNRN 307

[Close]

BLAST of Sed0019437 vs. NCBI nr
Match: XP_038879206.1 (auxin-responsive protein IAA27 [Benincasa hispida])

HSP 1 Score: 524.6 bits (1350), Expect = 5.5e-145
Identity = 267/308 (86.69%), Postives = 277/308 (89.94%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS PLEHDYIGLT ESVPS E SEKS+DR NNAGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSTPLEHDYIGLT-ESVPSLESSEKSSDRHNNAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           N+G+  KSSVSGAKRGFSVAIDRASA+WVLPASAGSEADS KNGGLFSPRGV EN T+ P
Sbjct: 61  NSGFLHKSSVSGAKRGFSVAIDRASAKWVLPASAGSEADSSKNGGLFSPRGVNENKTQQP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVSGVKDGISPSAKPVLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTYGSY DLS ALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSLALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300

Query: 301 MEKCKNHN 302
           MEKCKN N
Sbjct: 301 MEKCKNRN 307

[Close]

BLAST of Sed0019437 vs. NCBI nr
Match: XP_022987799.1 (auxin-responsive protein IAA27-like [Cucurbita maxima] >XP_022987802.1 auxin-responsive protein IAA27-like [Cucurbita maxima])

HSP 1 Score: 523.9 bits (1348), Expect = 9.4e-145
Identity = 263/307 (85.67%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS PLEHDYIGLT ES+PSQE SE S+DR N+AGLNLKATELRLGLPG ESPVR DG++D
Sbjct: 1   MSTPLEHDYIGLT-ESIPSQETSETSSDRPNSAGLNLKATELRLGLPGSESPVRHDGVDD 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNGYP K+S+SGAKRGFSVAIDRASA+WVLP SAGSEADS KNGGLFSPRGV EN T+PP
Sbjct: 61  NNGYPHKTSISGAKRGFSVAIDRASAKWVLPTSAGSEADSTKNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
           VSAV G K+G+SPSA      KP LSAPAAKAQVVGWPPIRSFRKNSMATQPPK+T+DA+
Sbjct: 121 VSAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAE 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            K GSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNG PN+DA
Sbjct: 181 GKSGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGFPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

Query: 301 EKCKNHN 302
           EKC+N N
Sbjct: 301 EKCRNRN 306

[Close]

BLAST of Sed0019437 vs. NCBI nr
Match: XP_004150556.1 (auxin-responsive protein IAA27 [Cucumis sativus] >KGN65095.1 hypothetical protein Csa_021512 [Cucumis sativus])

HSP 1 Score: 521.9 bits (1343), Expect = 3.6e-144
Identity = 266/307 (86.64%), Postives = 278/307 (90.55%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RN+AGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
            NG+  KSSVSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  KNGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
            SAV G K+G+SPSA      KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDAD
Sbjct: 121 ASAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGH GSNGVPN+DA
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

Query: 301 EKCKNHN 302
           EKCKN N
Sbjct: 301 EKCKNRN 306

[Close]

BLAST of Sed0019437 vs. ExPASy Swiss-Prot
Match: Q9ZSY8 (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-78
Identity = 180/320 (56.25%), Postives = 213/320 (66.56%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEG---SEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDG 60
           +S+  EHDYIGL+E   P+ E    S+K+  R NN GLN KATELRLGLPG ESP R D 
Sbjct: 3   VSVAAEHDYIGLSE--FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVDS 62

Query: 61  --LEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPR-GVIE 120
             L  N        VSGAKR FS AI+  S +WV    + +    + +G    PR  V++
Sbjct: 63  RFLALNKS---SCPVSGAKRVFSDAIN-DSNKWVFSPGSTTATGDVGSGS--GPRTSVVK 122

Query: 121 NG-----TKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMA---TQP 180
           +G     TKP V              K   +APA+KAQVVGWPPIRSFRKNSMA   +Q 
Sbjct: 123 DGKSTTFTKPAVPV---------KEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQK 182

Query: 181 P---KSTDDADDKLG--SGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTI 240
           P     T++A+ K G    C+YVKVSM+GAPYLRK+DLKTY SY++LSSALEKMFS FTI
Sbjct: 183 PGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTI 242

Query: 241 GHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIM 300
           G  GS+G   +D LNE RL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++RIM
Sbjct: 243 GQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIM 302

Query: 301 KSSEAIGLAPRAMEKCKNHN 302
           KSSEAIGLAPR MEKC++ N
Sbjct: 303 KSSEAIGLAPRVMEKCRSRN 305

[Close]

BLAST of Sed0019437 vs. ExPASy Swiss-Prot
Match: Q38827 (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.0e-69
Identity = 156/316 (49.37%), Postives = 206/316 (65.19%), Query Frame = 0


Query: 6   EHDYIGLTE-ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPG +SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNG 125
            L++   +PL            K++ SG KRGFS  +D+        A A S   + KN 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-------AEAKSSVYTEKN- 152

Query: 126 GLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMAT 185
            +F      ++ TK  V       +G S +     S PAAKAQ+VGWPP+RS+RKN++AT
Sbjct: 153 WMFPEAAATQSVTKKDVPQ--NIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT 212

Query: 186 QPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHC 245
              K++D+ D + GSG ++VKVSMDGAPYLRKVDL++Y +Y +LSSALEKMF++FT+G C
Sbjct: 213 -TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC 272

Query: 246 GSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSS 299
           GSNG   +D L+E +L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C +++IMK  
Sbjct: 273 GSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGC 332

[Close]

BLAST of Sed0019437 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.1e-69
Identity = 161/322 (50.00%), Postives = 201/322 (62.42%), Query Frame = 0


Query: 6   EHDYIGLTE------ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVR--DDG 65
           E +Y+GL++       ++P+  G  KSN       LN KATELRLGLP  +SP R  D G
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVG--KSN-------LNFKATELRLGLPESQSPERETDFG 80

Query: 66  L------EDNNGYPL-------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEA 125
           L      ++   +PL             K+ VSG KRGF              A    E 
Sbjct: 81  LLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGF--------------ADTWDEF 140

Query: 126 DSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPL-SAPAAKAQVVGWPPIRSF 185
             +K  G   P G I     P V  V  + +     AK  L +APAAKAQVVGWPPIRS+
Sbjct: 141 SGVK--GSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSY 200

Query: 186 RKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFS 245
           RKN+MA+   K+TD+ D K G G ++VKVSMDGAPYLRKVDL+TY SY  LSSALEKMFS
Sbjct: 201 RKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS 260

Query: 246 SFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTR 300
            FT+G CG +G   ++ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +
Sbjct: 261 CFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 317

[Close]

BLAST of Sed0019437 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 9.7e-68
Identity = 153/288 (53.12%), Postives = 181/288 (62.85%), Query Frame = 0


Query: 33  AGLNLKATELRLGLPGLESPVRDDGLEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPA 92
           A L  +ATELRLGLPG        G  D +     +  S  KRGF+  ID      + PA
Sbjct: 3   ADLAFEATELRLGLPG--------GGGDGDAAAAAARSSSGKRGFAETIDLKLK--LEPA 62

Query: 93  SAGSEADSIKNGGLFSPR-------GVIENGTKPPVSAVCG------AKEGVSPSAKPPL 152
           +A  + D  K       R       G   +   PP +A  G      ++  V  +A  P 
Sbjct: 63  AAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPE 122

Query: 153 SAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD---DKLGSG---CIYVKVSMDGAPY 212
              A KAQVVGWPP+RS+RKN +A Q  K  D AD   DK G+G     +VKVSMDGAPY
Sbjct: 123 KPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPY 182

Query: 213 LRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTY 272
           LRKVDLK Y SY++LS ALEKMFSSFTIG+CGS+GV   + +NE ++ DLL+GSEYV TY
Sbjct: 183 LRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTY 242

Query: 273 EDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNHN 302
           EDKDGDWMLVGDVPWEMF ESC R+RIMK SEAIGLAPRAMEKCKN +
Sbjct: 243 EDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277

[Close]

BLAST of Sed0019437 vs. ExPASy Swiss-Prot
Match: Q75GB1 (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.5e-64
Identity = 159/302 (52.65%), Postives = 184/302 (60.93%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS PLE DYIGL+   VP+   +   ND        LK TELRLGLPG  SP R      
Sbjct: 1   MSPPLELDYIGLS-PPVPAAADAAADND--------LKGTELRLGLPGSHSPDRSPPAAT 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
            +  P   +  GAKRGFS   D A     LPASA + A + K  G  +  G  +   +  
Sbjct: 61  LDLLP---AAKGAKRGFS---DEARP---LPASAAAAAAAGK--GKKAAAGEEDEDAEEE 120

Query: 121 VSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKST-DDADDKLGS 180
              V  A +           APAAKAQVVGWPPIRS+RKN+MAT   KS+ +DA+ K G 
Sbjct: 121 DKKVAAAPQ-----------APAAKAQVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQ 180

Query: 181 GCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDALNEKR 240
           G +YVKVSMDGAPYLRKVDLKTY +Y DLS+ALEKMF  FT G         +D L+E R
Sbjct: 181 GFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTG---------KDGLSESR 240

Query: 241 LMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKN 300
                   EYVLTYEDKDGDWMLVGDVPWEMF  SC R+RIMK S+AIGLAPRA++K KN
Sbjct: 241 -----KDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDKSKN 257

Query: 301 HN 302
            N
Sbjct: 301 RN 257

[Close]

BLAST of Sed0019437 vs. ExPASy TrEMBL
Match: A0A5D3BFM3 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00160 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.4e-147
Identity = 269/308 (87.34%), Postives = 280/308 (90.91%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESPVRDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPVRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300

Query: 301 MEKCKNHN 302
           MEKCKN N
Sbjct: 301 MEKCKNRN 307

[Close]

BLAST of Sed0019437 vs. ExPASy TrEMBL
Match: A0A1S3CHQ1 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 4.1e-146
Identity = 268/308 (87.01%), Postives = 279/308 (90.58%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RNNAGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNG+  KS VSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  NNGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA-------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDA 180
            SAV G K+G+SPSA       KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDA
Sbjct: 121 ASAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDA 180

Query: 181 DDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQD 240
           D KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNGVPN+D
Sbjct: 181 DGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRD 240

Query: 241 ALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300
           ALNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA
Sbjct: 241 ALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRA 300

Query: 301 MEKCKNHN 302
           MEKCKN N
Sbjct: 301 MEKCKNRN 307

[Close]

BLAST of Sed0019437 vs. ExPASy TrEMBL
Match: A0A6J1JBD0 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485238 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.6e-145
Identity = 263/307 (85.67%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS PLEHDYIGLT ES+PSQE SE S+DR N+AGLNLKATELRLGLPG ESPVR DG++D
Sbjct: 1   MSTPLEHDYIGLT-ESIPSQETSETSSDRPNSAGLNLKATELRLGLPGSESPVRHDGVDD 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNGYP K+S+SGAKRGFSVAIDRASA+WVLP SAGSEADS KNGGLFSPRGV EN T+PP
Sbjct: 61  NNGYPHKTSISGAKRGFSVAIDRASAKWVLPTSAGSEADSTKNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
           VSAV G K+G+SPSA      KP LSAPAAKAQVVGWPPIRSFRKNSMATQPPK+T+DA+
Sbjct: 121 VSAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAE 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            K GSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGHCGSNG PN+DA
Sbjct: 181 GKSGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGFPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

Query: 301 EKCKNHN 302
           EKC+N N
Sbjct: 301 EKCRNRN 306

[Close]

BLAST of Sed0019437 vs. ExPASy TrEMBL
Match: A0A0A0LT68 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G207820 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144
Identity = 266/307 (86.64%), Postives = 278/307 (90.55%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MSIPLEHDYIGLT ESVPS E SEKS+D+RN+AGLNLKATELRLGLPG ESP RDDG ED
Sbjct: 1   MSIPLEHDYIGLT-ESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
            NG+  KSSVSGAKRGFS+AIDRASA+WVLPASAGSEADS  NGGLFSPRGV EN T+PP
Sbjct: 61  KNGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPP 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
            SAV G K+G+SPSA      KP LS PAAKAQVVGWPPIRSFRKNSMATQPPK+TDDAD
Sbjct: 121 ASAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            KLGSGC+YVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGH GSNGVPN+DA
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

Query: 301 EKCKNHN 302
           EKCKN N
Sbjct: 301 EKCKNRN 306

[Close]

BLAST of Sed0019437 vs. ExPASy TrEMBL
Match: A0A6J1CTT1 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014504 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.0e-144
Identity = 264/307 (85.99%), Postives = 278/307 (90.55%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDGLED 60
           MS+PLEHDYIGLT ESVP  E SEKS+DRRNN GLNLKATELRLGLPG ESP RDDGLED
Sbjct: 1   MSMPLEHDYIGLT-ESVPPLESSEKSSDRRNNGGLNLKATELRLGLPGSESPRRDDGLED 60

Query: 61  NNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPRGVIENGTKPP 120
           NNGYPLKSSVSGAKRGFSVAIDRASA+WVLP+SAGSEADS K GGLFSPR    N T+P 
Sbjct: 61  NNGYPLKSSVSGAKRGFSVAIDRASAKWVLPSSAGSEADSSKPGGLFSPRVNENNKTQPS 120

Query: 121 VSAVCGAKEGVSPSA------KPPLSAPAAKAQVVGWPPIRSFRKNSMATQPPKSTDDAD 180
            +AV G K+G+SPSA      KP LSAPAAKAQVVGWPPIRSFRKNSMATQPPK+T+DAD
Sbjct: 121 STAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAD 180

Query: 181 DKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGVPNQDA 240
            KLGSGC+YVKVSMDGAPYLRKVDLKTYGSYV+LSSALEKMFSSFT+GHCGSNGVPN+DA
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYGSYVELSSALEKMFSSFTLGHCGSNGVPNRDA 240

Query: 241 LNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
           LNE RLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

Query: 301 EKCKNHN 302
            KCKN N
Sbjct: 301 AKCKNRN 306

[Close]

BLAST of Sed0019437 vs. TAIR 10
Match: AT4G29080.1 (phytochrome-associated protein 2 )

HSP 1 Score: 294.7 bits (753), Expect = 8.6e-80
Identity = 180/320 (56.25%), Postives = 213/320 (66.56%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTEESVPSQEG---SEKSNDRRNNAGLNLKATELRLGLPGLESPVRDDG 60
           +S+  EHDYIGL+E   P+ E    S+K+  R NN GLN KATELRLGLPG ESP R D 
Sbjct: 3   VSVAAEHDYIGLSE--FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVDS 62

Query: 61  --LEDNNGYPLKSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNGGLFSPR-GVIE 120
             L  N        VSGAKR FS AI+  S +WV    + +    + +G    PR  V++
Sbjct: 63  RFLALNKS---SCPVSGAKRVFSDAIN-DSNKWVFSPGSTTATGDVGSGS--GPRTSVVK 122

Query: 121 NG-----TKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMA---TQP 180
           +G     TKP V              K   +APA+KAQVVGWPPIRSFRKNSMA   +Q 
Sbjct: 123 DGKSTTFTKPAVPV---------KEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQK 182

Query: 181 P---KSTDDADDKLG--SGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTI 240
           P     T++A+ K G    C+YVKVSM+GAPYLRK+DLKTY SY++LSSALEKMFS FTI
Sbjct: 183 PGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTI 242

Query: 241 GHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIM 300
           G  GS+G   +D LNE RL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++RIM
Sbjct: 243 GQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIM 302

Query: 301 KSSEAIGLAPRAMEKCKNHN 302
           KSSEAIGLAPR MEKC++ N
Sbjct: 303 KSSEAIGLAPRVMEKCRSRN 305

[Close]

BLAST of Sed0019437 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 268.5 bits (685), Expect = 6.6e-72
Identity = 156/314 (49.68%), Postives = 206/314 (65.61%), Query Frame = 0


Query: 6   EHDYIGLTE-ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPG +SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNG 125
            L++   +PL            K++ SG KRGFS  +D+        A A S   + KN 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-------AEAKSSVYTEKN- 152

Query: 126 GLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMAT 185
            +F      ++ TK  V       +G S +     S PAAKAQ+VGWPP+RS+RKN++AT
Sbjct: 153 WMFPEAAATQSVTKKDVPQ--NIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT 212

Query: 186 QPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHC 245
              K++D+ D + GSG ++VKVSMDGAPYLRKVDL++Y +Y +LSSALEKMF++FT+G C
Sbjct: 213 -TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC 272

Query: 246 GSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSS 299
           GSNG   +D L+E +L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C +++IMK  
Sbjct: 273 GSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGC 332

[Close]

BLAST of Sed0019437 vs. TAIR 10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 263.5 bits (672), Expect = 2.1e-70
Identity = 156/316 (49.37%), Postives = 206/316 (65.19%), Query Frame = 0


Query: 6   EHDYIGLTE-ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPG +SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEADSIKNG 125
            L++   +PL            K++ SG KRGFS  +D+        A A S   + KN 
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-------AEAKSSVYTEKN- 152

Query: 126 GLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPLSAPAAKAQVVGWPPIRSFRKNSMAT 185
            +F      ++ TK  V       +G S +     S PAAKAQ+VGWPP+RS+RKN++AT
Sbjct: 153 WMFPEAAATQSVTKKDVPQ--NIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLAT 212

Query: 186 QPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHC 245
              K++D+ D + GSG ++VKVSMDGAPYLRKVDL++Y +Y +LSSALEKMF++FT+G C
Sbjct: 213 -TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC 272

Query: 246 GSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSS 299
           GSNG   +D L+E +L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C +++IMK  
Sbjct: 273 GSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGC 332

[Close]

BLAST of Sed0019437 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 262.7 bits (670), Expect = 3.6e-70
Identity = 161/322 (50.00%), Postives = 201/322 (62.42%), Query Frame = 0


Query: 6   EHDYIGLTE------ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVR--DDG 65
           E +Y+GL++       ++P+  G  KSN       LN KATELRLGLP  +SP R  D G
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVG--KSN-------LNFKATELRLGLPESQSPERETDFG 80

Query: 66  L------EDNNGYPL-------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEA 125
           L      ++   +PL             K+ VSG KRGF              A    E 
Sbjct: 81  LLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGF--------------ADTWDEF 140

Query: 126 DSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPL-SAPAAKAQVVGWPPIRSF 185
             +K  G   P G I     P V  V  + +     AK  L +APAAKAQVVGWPPIRS+
Sbjct: 141 SGVK--GSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSY 200

Query: 186 RKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFS 245
           RKN+MA+   K+TD+ D K G G ++VKVSMDGAPYLRKVDL+TY SY  LSSALEKMFS
Sbjct: 201 RKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS 260

Query: 246 SFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTR 300
            FT+G CG +G   ++ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +
Sbjct: 261 CFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 317

[Close]

BLAST of Sed0019437 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 262.7 bits (670), Expect = 3.6e-70
Identity = 161/322 (50.00%), Postives = 201/322 (62.42%), Query Frame = 0


Query: 6   EHDYIGLTE------ESVPSQEGSEKSNDRRNNAGLNLKATELRLGLPGLESPVR--DDG 65
           E +Y+GL++       ++P+  G  KSN       LN KATELRLGLP  +SP R  D G
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVG--KSN-------LNFKATELRLGLPESQSPERETDFG 80

Query: 66  L------EDNNGYPL-------------KSSVSGAKRGFSVAIDRASARWVLPASAGSEA 125
           L      ++   +PL             K+ VSG KRGF              A    E 
Sbjct: 81  LLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGF--------------ADTWDEF 140

Query: 126 DSIKNGGLFSPRGVIENGTKPPVSAVCGAKEGVSPSAKPPL-SAPAAKAQVVGWPPIRSF 185
             +K  G   P G I     P V  V  + +     AK  L +APAAKAQVVGWPPIRS+
Sbjct: 141 SGVK--GSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSY 200

Query: 186 RKNSMATQPPKSTDDADDKLGSGCIYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFS 245
           RKN+MA+   K+TD+ D K G G ++VKVSMDGAPYLRKVDL+TY SY  LSSALEKMFS
Sbjct: 201 RKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS 260

Query: 246 SFTIGHCGSNGVPNQDALNEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTR 300
            FT+G CG +G   ++ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +
Sbjct: 261 CFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 317

The following BLAST results are available for this feature:

BLAST of Sed0019437 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98063.1	1.3e-146	87.34	auxin-responsive protein IAA27 [Cucumis melo var. makuwa]	[more]
XP_008462746.1	8.5e-146	87.01	PREDICTED: auxin-responsive protein IAA27 [Cucumis melo]	[more]
XP_038879206.1	5.5e-145	86.69	auxin-responsive protein IAA27 [Benincasa hispida]	[more]
XP_022987799.1	9.4e-145	85.67	auxin-responsive protein IAA27-like [Cucurbita maxima] >XP_022987802.1 auxin-res...	[more]
XP_004150556.1	3.6e-144	86.64	auxin-responsive protein IAA27 [Cucumis sativus] >KGN65095.1 hypothetical protei...	[more]

BLAST of Sed0019437 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSY8	1.2e-78	56.25	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=...	[more]
Q38827	3.0e-69	49.37	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
Q38826	5.1e-69	50.00	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]
P0C132	9.7e-68	53.13	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]
Q75GB1	6.5e-64	52.65	Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17...	[more]

BLAST of Sed0019437 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFM3	6.4e-147	87.34	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CHQ1	4.1e-146	87.01	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1	[more]
A0A6J1JBD0	4.6e-145	85.67	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485238 PE=3 SV=1	[more]
A0A0A0LT68	1.7e-144	86.64	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G207820 PE=3 SV=1	[more]
A0A6J1CTT1	3.0e-144	85.99	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014504 PE=3 SV=...	[more]

BLAST of Sed0019437 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29080.1	8.6e-80	56.25	phytochrome-associated protein 2	[more]
AT5G65670.2	6.6e-72	49.68	indole-3-acetic acid inducible 9	[more]
AT5G65670.1	2.1e-70	49.37	indole-3-acetic acid inducible 9	[more]
AT2G22670.1	3.6e-70	50.00	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	3.6e-70	50.00	indoleacetic acid-induced protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 176..294 e-value: 6.3E-43 score: 147.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR31734:SF157	AUXIN-RESPONSIVE PROTEIN	coord: 5..292
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 179..282
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 40..290 e-value: 3.6E-83 score: 279.1
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 5..292
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 181..283 score: 24.618954

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019437.1	Sed0019437.1	mRNA
Sed0019437.2	Sed0019437.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding