Sed0019371.1 (mRNA) Chayote v1

Overview


Name	Sed0019371.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	E3 ubiquitin-protein ligase ATL6
Location	LG08: 31920548 .. 31922065 (+)
Sequence length	1518
RNA-Seq Expression	Sed0019371.1
Synteny	Sed0019371.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGGAGAATTAGATTTGAAAATCAGCAATTTTGTGTCGAAATCATTGTCCAGCTTTCTTTGTAGCATACGTTAATACGACACCGTTTCGCACCGTCTTCCTCATTTCCTCCATTTTTAAAGCTTCACTTCCCTTTGACTTTTCTCCGCCATGGCCGTCCTTACTTCCTCTTTATTTCTCCCTTCATAGCTCTCTCTCTCTCTCTCAATTTCCGATCACAACAATCATGTCCTCAACCGCCGCCGCCCATGGATTGCTTTTCCTCCTTCTCCTCCGGTCCGTCTCCGGCCAGTCCCTGCTCCCCCCGGACCCCAGATTCGACCCGAACCAGACCCAAATCAGCGGCTCCATGGCCGTCATCGTCGTCATCCTCATCGCCGCCCTCTTCTTCATGGCCTTCTTCTCCGTCTACATCCGCCACTGCAACGACTCCCCCTCCGCCGCCGCCGCCACCACGCTCCGCCCTACCGCCGCCGGCCGCTCCCGCCGCGCCACCCGCGGCCTCGATCCGGCCCTAATCGAAACCTTCCCCACTCTGATCTACTCCGAAGTGAAAGAGCACAAAATCGGCAAAAGCGCCCTGGAATGCGCGGTTTGCCTGAGCGAATTCGAAGACGACGAAACGCTGCGTTTAATCCCCAAATGCGACCACGTATTTCACCCCGAATGCATCGACGCTTGGCTGGCTTCTCACTCTACCTGCCCCGTCTGTCGCGCCGATTTGAACCCCCCTCCACTCACTGAGTCCGCTCACCGAGTTACCGAGTCGGATCATCTGGAACCGGCTGAGACTCGGCCTGACGACGTCGCTTTGGAGCCCGATCCTCAACCGGCTTCTCCGTTGCCGGACGTTGATTTGGAGTCCAAGGCGTTGAATCGGAACCGTACGCGTGGATCCAGATCCACCAGGTTGCGGTGGCTGTTTCCGCGCTCTCACTCGACCGGTCACTCCCTGGTTCAGCCGGGTGAGGACACGGAGCGCTTTACTCTTCGGCTGCCGGTTGAGGTGAGGAAGCAGCTGGTGAACCGCAAGCTCAACCGGGCTACCAGTATGGTGGTTCTGGCCAGGCAGAGCAGCTCCATGAGGGGCTACCGCTTTGGCTCGGGCGAAGGGAGTAGTCGAGGGAGGTATTACCGCCGGCTCGAGCGGTTGGACCGGACGTCCAAGTCCGACCGCTGGATTTTATCTGTTACGCCGCCGTTTTTCACGCGGATGTCGTCGATGAAGACTCCCCGAGGAGGGAGTAACCGTGGGGGCGAAGCGGGTTCGGGATCTGGACCGGAGAATTTAACCGCTGATTCAAATTTGCTTCCGGTTTGAAGTCGTTTTTTCGCCCCATTTTTACATAAATTACTTCCAATATTTTTTAATACAATAATTCAATAATGAAAAGAGAGAGATTCGGATTCGAAATGTAATTACTTTGGAATTTCCGGAAGGGAATTTGCCTTTGTATCTCATATAGATTCATTTAACTCAAGTTTTGTGTATTTATATACTTATTATTATTCATTTAC

mRNA sequence

TATGGAGAATTAGATTTGAAAATCAGCAATTTTGTGTCGAAATCATTGTCCAGCTTTCTTTGTAGCATACGTTAATACGACACCGTTTCGCACCGTCTTCCTCATTTCCTCCATTTTTAAAGCTTCACTTCCCTTTGACTTTTCTCCGCCATGGCCGTCCTTACTTCCTCTTTATTTCTCCCTTCATAGCTCTCTCTCTCTCTCTCAATTTCCGATCACAACAATCATGTCCTCAACCGCCGCCGCCCATGGATTGCTTTTCCTCCTTCTCCTCCGGTCCGTCTCCGGCCAGTCCCTGCTCCCCCCGGACCCCAGATTCGACCCGAACCAGACCCAAATCAGCGGCTCCATGGCCGTCATCGTCGTCATCCTCATCGCCGCCCTCTTCTTCATGGCCTTCTTCTCCGTCTACATCCGCCACTGCAACGACTCCCCCTCCGCCGCCGCCGCCACCACGCTCCGCCCTACCGCCGCCGGCCGCTCCCGCCGCGCCACCCGCGGCCTCGATCCGGCCCTAATCGAAACCTTCCCCACTCTGATCTACTCCGAAGTGAAAGAGCACAAAATCGGCAAAAGCGCCCTGGAATGCGCGGTTTGCCTGAGCGAATTCGAAGACGACGAAACGCTGCGTTTAATCCCCAAATGCGACCACGTATTTCACCCCGAATGCATCGACGCTTGGCTGGCTTCTCACTCTACCTGCCCCGTCTGTCGCGCCGATTTGAACCCCCCTCCACTCACTGAGTCCGCTCACCGAGTTACCGAGTCGGATCATCTGGAACCGGCTGAGACTCGGCCTGACGACGTCGCTTTGGAGCCCGATCCTCAACCGGCTTCTCCGTTGCCGGACGTTGATTTGGAGTCCAAGGCGTTGAATCGGAACCGTACGCGTGGATCCAGATCCACCAGGTTGCGGTGGCTGTTTCCGCGCTCTCACTCGACCGGTCACTCCCTGGTTCAGCCGGGTGAGGACACGGAGCGCTTTACTCTTCGGCTGCCGGTTGAGGTGAGGAAGCAGCTGGTGAACCGCAAGCTCAACCGGGCTACCAGTATGGTGGTTCTGGCCAGGCAGAGCAGCTCCATGAGGGGCTACCGCTTTGGCTCGGGCGAAGGGAGTAGTCGAGGGAGGTATTACCGCCGGCTCGAGCGGTTGGACCGGACGTCCAAGTCCGACCGCTGGATTTTATCTGTTACGCCGCCGTTTTTCACGCGGATGTCGTCGATGAAGACTCCCCGAGGAGGGAGTAACCGTGGGGGCGAAGCGGGTTCGGGATCTGGACCGGAGAATTTAACCGCTGATTCAAATTTGCTTCCGGTTTGAAGTCGTTTTTTCGCCCCATTTTTACATAAATTACTTCCAATATTTTTTAATACAATAATTCAATAATGAAAAGAGAGAGATTCGGATTCGAAATGTAATTACTTTGGAATTTCCGGAAGGGAATTTGCCTTTGTATCTCATATAGATTCATTTAACTCAAGTTTTGTGTATTTATATACTTATTATTATTCATTTAC

Coding sequence (CDS)

ATGTCCTCAACCGCCGCCGCCCATGGATTGCTTTTCCTCCTTCTCCTCCGGTCCGTCTCCGGCCAGTCCCTGCTCCCCCCGGACCCCAGATTCGACCCGAACCAGACCCAAATCAGCGGCTCCATGGCCGTCATCGTCGTCATCCTCATCGCCGCCCTCTTCTTCATGGCCTTCTTCTCCGTCTACATCCGCCACTGCAACGACTCCCCCTCCGCCGCCGCCGCCACCACGCTCCGCCCTACCGCCGCCGGCCGCTCCCGCCGCGCCACCCGCGGCCTCGATCCGGCCCTAATCGAAACCTTCCCCACTCTGATCTACTCCGAAGTGAAAGAGCACAAAATCGGCAAAAGCGCCCTGGAATGCGCGGTTTGCCTGAGCGAATTCGAAGACGACGAAACGCTGCGTTTAATCCCCAAATGCGACCACGTATTTCACCCCGAATGCATCGACGCTTGGCTGGCTTCTCACTCTACCTGCCCCGTCTGTCGCGCCGATTTGAACCCCCCTCCACTCACTGAGTCCGCTCACCGAGTTACCGAGTCGGATCATCTGGAACCGGCTGAGACTCGGCCTGACGACGTCGCTTTGGAGCCCGATCCTCAACCGGCTTCTCCGTTGCCGGACGTTGATTTGGAGTCCAAGGCGTTGAATCGGAACCGTACGCGTGGATCCAGATCCACCAGGTTGCGGTGGCTGTTTCCGCGCTCTCACTCGACCGGTCACTCCCTGGTTCAGCCGGGTGAGGACACGGAGCGCTTTACTCTTCGGCTGCCGGTTGAGGTGAGGAAGCAGCTGGTGAACCGCAAGCTCAACCGGGCTACCAGTATGGTGGTTCTGGCCAGGCAGAGCAGCTCCATGAGGGGCTACCGCTTTGGCTCGGGCGAAGGGAGTAGTCGAGGGAGGTATTACCGCCGGCTCGAGCGGTTGGACCGGACGTCCAAGTCCGACCGCTGGATTTTATCTGTTACGCCGCCGTTTTTCACGCGGATGTCGTCGATGAAGACTCCCCGAGGAGGGAGTAACCGTGGGGGCGAAGCGGGTTCGGGATCTGGACCGGAGAATTTAACCGCTGATTCAAATTTGCTTCCGGTTTGA

Protein sequence

MSSTAAAHGLLFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFFMAFFSVYIRHCNDSPSAAAATTLRPTAAGRSRRATRGLDPALIETFPTLIYSEVKEHKIGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAHRVTESDHLEPAETRPDDVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRGGEAGSGSGPENLTADSNLLPV

Homology

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BLAST of Sed0019371.1 vs. NCBI nr
Match: XP_038888961.1 (E3 ubiquitin-protein ligase ATL6-like [Benincasa hispida])

HSP 1 Score: 519.2 bits (1336), Expect = 2.8e-143
Identity = 285/378 (75.40%), Postives = 311/378 (82.28%), Query Frame = 0


Query: 1   MSSTAAAHGLL--FLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFFMAF 60
           MSS  A HG L  FLLL  S S Q+ L PDPR DP Q ++SGSMAVI+VILIAALFFMAF
Sbjct: 1   MSSFTAVHGPLFFFLLLFFSASAQTQLSPDPRSDPYQYRLSGSMAVIIVILIAALFFMAF 60

Query: 61  FSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHKIGK 120
           FSVYIRHCNDS S     T+RP   AA RSRRATRGLDPA+IETFPTL+YS+VKEHKIGK
Sbjct: 61  FSVYIRHCNDSQS----NTVRPISNAAARSRRATRGLDPAVIETFPTLVYSDVKEHKIGK 120

Query: 121 SALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAH 180
           SALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+ P LTES H
Sbjct: 121 SALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLS-PQLTESVH 180

Query: 181 RVTESDHL-------EPAETRPDDVALEPDPQPASPLP-DVDLESKALNRNRTRGSRSTR 240
           RV +S+ +          E   +DV  E    P   +P + +L +KALNR RTRGSRS R
Sbjct: 181 RVGDSNAVVNPDSDGGDIEAPSNDVVSETTAPPPVQIPTESELPNKALNRTRTRGSRSNR 240

Query: 241 LRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLARQSSSMRG 300
           LRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKLNRATSMVVLARQSSSMRG
Sbjct: 241 LRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSSSMRG 300

Query: 301 YRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRGGEAGS 360
           YRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN  GE+GS
Sbjct: 301 YRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNH-GESGS 360

Query: 361 GS--GPENLTADSNLLPV 365
           G   G  N T DS+ LPV
Sbjct: 361 GRELGQGNSTVDSSRLPV 372

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BLAST of Sed0019371.1 vs. NCBI nr
Match: XP_004139190.1 (E3 ubiquitin-protein ligase ATL6 [Cucumis sativus] >KAE8651591.1 hypothetical protein Csa_023458 [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 6.9e-142
Identity = 284/385 (73.77%), Postives = 309/385 (80.26%), Query Frame = 0


Query: 1   MSSTAAAHG-----LLFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 60
           M S  A HG     LLFL L  SVS QS   PDPR DP Q ++SGSMAVI+VILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHK 120
           MAFFSVYIRHCNDS S     T+RP   AAGRSRRATRGLDPA+IETFPTLIYS+VKEHK
Sbjct: 61  MAFFSVYIRHCNDSQS----NTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 120

Query: 121 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 180
           IGKSALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+ P LTE
Sbjct: 121 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLS-PQLTE 180

Query: 181 SAHRVTESDHLEPAETRPDDVALEPD----PQPASPLPDVDLES--------KALNRNRT 240
           S HRV +S+ +  ++T   D+  +         A P   +  ES        KALNR RT
Sbjct: 181 SVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRT 240

Query: 241 RGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLAR 300
           RGSRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKLNRA SMVVLAR
Sbjct: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLAR 300

Query: 301 QSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSN 360
           QSSSMRGYRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN
Sbjct: 301 QSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSN 360

Query: 361 RGGEAGSGS--GPENLTADSNLLPV 365
           R GE GSG   G  N   +S++LPV
Sbjct: 361 R-GEPGSGRELGQGNTAVESSMLPV 379

[Close]

BLAST of Sed0019371.1 vs. NCBI nr
Match: XP_008454907.2 (PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo] >AAO45753.1 RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 509.6 bits (1311), Expect = 2.2e-140
Identity = 281/385 (72.99%), Postives = 307/385 (79.74%), Query Frame = 0


Query: 1   MSSTAAAHGL-----LFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 60
           M S  A HGL     L L L  SVS Q    PDPR DP Q ++SGSMAVI+VILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHK 120
           MAFFSVYIRHCNDSPS     T+RP   AAGRSRRATRGLDPA+IETFPTLIYS+VKEHK
Sbjct: 61  MAFFSVYIRHCNDSPS----NTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 120

Query: 121 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 180
           IGKSALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+P P T+
Sbjct: 121 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQP-TD 180

Query: 181 SAHRVTESDHLEPAETRPDDVALEPD----PQPASPLPDVDLES--------KALNRNRT 240
           S HR  +S+ +  ++T   D+  + +       A P   +  ES        KALNR RT
Sbjct: 181 SVHRADDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQIQTESELSTTTSNKALNRTRT 240

Query: 241 RGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLAR 300
           RGSRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKL+RATSMVVLAR
Sbjct: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLAR 300

Query: 301 QSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSN 360
           QSSSMRGYRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN
Sbjct: 301 QSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSN 360

Query: 361 RGGEAGSGS--GPENLTADSNLLPV 365
           R  E GSG   G  N   DS+ LPV
Sbjct: 361 R-AEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of Sed0019371.1 vs. NCBI nr
Match: KAA0047946.1 (E3 ubiquitin-protein ligase ATL6 [Cucumis melo var. makuwa])

HSP 1 Score: 508.4 bits (1308), Expect = 4.9e-140
Identity = 280/385 (72.73%), Postives = 307/385 (79.74%), Query Frame = 0


Query: 1   MSSTAAAHGL-----LFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 60
           M S  A HGL     L L L  SVS Q    PDPR DP Q ++SGSMAVI+VILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHK 120
           MAFFSVYIRHCNDSPS     T+RP   AAGRSRRATRGLDPA+IETFPTLIYS+VKEHK
Sbjct: 61  MAFFSVYIRHCNDSPS----NTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 120

Query: 121 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 180
           IGKSALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+P P T+
Sbjct: 121 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQP-TD 180

Query: 181 SAHRVTESDHLEPAETRPDDVALEPD----PQPASPLPDVDLES--------KALNRNRT 240
           S HR  +S+ +  ++T   D+  + +       A P   +  ES        K+LNR RT
Sbjct: 181 SVHRADDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQIQTESELSTTTSNKSLNRTRT 240

Query: 241 RGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLAR 300
           RGSRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKL+RATSMVVLAR
Sbjct: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLAR 300

Query: 301 QSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSN 360
           QSSSMRGYRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN
Sbjct: 301 QSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSN 360

Query: 361 RGGEAGSGS--GPENLTADSNLLPV 365
           R  E GSG   G  N   DS+ LPV
Sbjct: 361 R-AEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of Sed0019371.1 vs. NCBI nr
Match: XP_022999119.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita maxima])

HSP 1 Score: 506.5 bits (1303), Expect = 1.9e-139
Identity = 276/383 (72.06%), Postives = 309/383 (80.68%), Query Frame = 0


Query: 1   MSSTAAAHGLLFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFFMAFFS 60
           M+S  A H  LF LL  SVS QS   PDPR DP Q ++SGSMAVI+VILIAALFF+AFFS
Sbjct: 1   MASFTAVHAALFFLLSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAFFS 60

Query: 61  VYIRHCNDSPSAAAATTLRP-TAAGRSRRATRGLDPALIETFPTLIYSEVKEHKIGKSAL 120
           VY+RHCNDS S     ++RP TAA RSRRA RGLDPA+IETFPTLIYS+VKEHKIGKS L
Sbjct: 61  VYLRHCNDSQS----NSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKEHKIGKSTL 120

Query: 121 ECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAHRVT 180
           ECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRA+L+ P LTES HRV 
Sbjct: 121 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLS-PQLTESVHRVE 180

Query: 181 ES-------DHLEPAETRPDDVALEPDPQPASPLPDVDLES---------KALNRNRTRG 240
           +S       ++    E + +DV  E +P  A P   + +ES         KALNRNRTRG
Sbjct: 181 DSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIHIPVESELNTTTAANKALNRNRTRG 240

Query: 241 SRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLARQS 300
           SRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+E+RKQ+VNRKLNRATSMV+LARQS
Sbjct: 241 SRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQS 300

Query: 301 SSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRG 360
           SS+RGY+FGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGS   
Sbjct: 301 SSIRGYQFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIH- 360

Query: 361 GEAGSGS--GPENLTADSNLLPV 365
           GE G G   G  N TA+S+ LPV
Sbjct: 361 GEPGLGRELGQGNSTAESSRLPV 377

[Close]

BLAST of Sed0019371.1 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 270.0 bits (689), Expect = 3.9e-71
Identity = 177/398 (44.47%), Postives = 222/398 (55.78%), Query Frame = 0


Query: 10  LLFLLLLRSVS-GQSLLPPDPRFDP-NQTQISGSMAVIVVILIAALFFMAFFSVYIRHCN 69
           ++FLL+L S     S   P P   P N  ++S +MAVIVVILIAALFFM FFS+Y RHC+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 70  DSPSAAAATTLRPTAAGRSR----RATRGLDPALIETFPTLIYSEVKEHKIGKSALECAV 129
             P A  +    P    RSR     A RGLD +++ETFPT +YS+VK  K+GK  LECA+
Sbjct: 75  GVPDAGVS----PAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAI 134

Query: 130 CLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAHRVTESDH 189
           CL+EFEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRA+L        A +V E + 
Sbjct: 135 CLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL--------AEQVAEGES 194

Query: 190 LEPAETRPD----DVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRWLFPRSHST 249
           +EP  T PD     V + P+P   +P+P+  L +  ++  R  G      R  F RSH+T
Sbjct: 195 VEPGGTEPDLELQQVVVNPEPVVTAPVPE-QLVTSEVDSRRLPGVPVDLKRVKFSRSHTT 254

Query: 250 GHSLVQPGEDTERFTLRLPVEVRKQLV-NRKLNRATSMVVLARQSSSMRG---------- 309
           GHS+VQPGE TERFTLRLP +VRK+++ + KLNR  S++VL R  SS RG          
Sbjct: 255 GHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKPIDRSRARS 314

Query: 310 --------------------YRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFT 365
                                R G+  GS R          D     DRW       F  
Sbjct: 315 DRWLFRKTPSFLWRSRDDGSIRLGA-TGSVRASAVPNSTGSDSVRAGDRWAFLRNASFLW 374

[Close]

BLAST of Sed0019371.1 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 246.1 bits (627), Expect = 6.0e-64
Identity = 165/361 (45.71%), Postives = 203/361 (56.23%), Query Frame = 0


Query: 10  LLFLLLLRSVSGQSLLPPDPRFDP--NQTQISGSMAVIVVILIAALFFMAFFSVYIRHCN 69
           +L L LL SVS      PD R DP      +S +MAV+VV++IAALFFM FF+VYIRHC 
Sbjct: 11  VLVLFLLLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCT 70

Query: 70  DSPSAAAATTLRPTAAGRSRRAT-----RGLDPALIETFPTLIYSEVKEHKIGKSALECA 129
            +   +        A G  RR T     RGLD   IETFPT +YSEVK  KIGK ALECA
Sbjct: 71  GAVDGSVT-----PAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECA 130

Query: 130 VCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAHRVTESD 189
           +CL+EFEDDETLRL+PKCDHVFHP CI AWL  H TCPVCR +L     T     V E+D
Sbjct: 131 ICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL--AEQTPEPEVVVETD 190

Query: 190 HLEPAETRPDDVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRWLFPRSHSTGHS 249
                        LE   Q A P+P V+L                  R  FPRSH+TGHS
Sbjct: 191 -------------LEAQQQSAVPVPVVELP-----------------RVKFPRSHTTGHS 250

Query: 250 LVQPGEDTERFTLRLPVEVRKQLV-NRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGR 309
           +V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ VL R  SS  G             
Sbjct: 251 VVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSG------------- 310

Query: 310 YYRRLERLDRT-SKSDRWILSVTPPFFTRM---SSMKTPRGGSNRGGEAGSGSGPENLTA 359
                +++DR+ +KSDRW+   TP F  R     S++    GS RG    S SG +++ A
Sbjct: 311 -----KQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGGTGSVRGNSVTSPSG-DSVRA 315

[Close]

BLAST of Sed0019371.1 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 7.4e-54
Identity = 155/366 (42.35%), Postives = 204/366 (55.74%), Query Frame = 0


Query: 10  LLFLLLLRS------VSGQS------LLPPDPRFDPNQTQISGSMAVIVVILIAALFFMA 69
           LLFLLLL S      V+GQ+      +     RFDP       +MA+++++L++  FF+ 
Sbjct: 26  LLFLLLLSSHGGFKFVAGQATHGGSDVSGDSSRFDP-------TMAILMIVLVSVFFFLG 85

Query: 70  FFSVYIRHCNDSPSAAAATTLRPTAAGR----SRRATRGLDPALIETFPTLIYSEVKEHK 129
           FFSVYIR C +           P  AG     +R+  RGLD ++IETFPT  YS VK  +
Sbjct: 86  FFSVYIRRCLE--RVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLR 145

Query: 130 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 189
           IGK ALEC+VCL+EFEDDETLRLIPKC HVFHP CIDAWL SH+TCP+CRADL P P   
Sbjct: 146 IGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGES 205

Query: 190 SAHRVTESDHLEPAETRPDDVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRW-- 249
                      +P  + P+   +     P + L    +ES AL  N++   RS    W  
Sbjct: 206 IVSIQIPGLVNDPPGSDPNGDRIRSLGSPDARL----IESVALTCNQSMPRRSMSTGWNL 265

Query: 250 --LFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLARQSSSMRGY 309
             +F  S  TG    Q  E+ +RFTLRLP ++  +LVN  L++    V L +  SS RGY
Sbjct: 266 AGMFTNSDRTG----QHSENLDRFTLRLPQDIHNKLVNPNLSKV--HVALPQVMSSTRGY 325

Query: 310 RFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRGGEAGSG 356
           R GS  GS R  +Y   ER D+  + DR   S+TPP+ T   +  +P GGS  GG+    
Sbjct: 326 RTGS-LGSERNYFY--YERFDQDGRLDRRPFSITPPYRTSSINHMSP-GGS--GGDKVRA 366

[Close]

BLAST of Sed0019371.1 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.5e-48
Identity = 156/380 (41.05%), Postives = 209/380 (55.00%), Query Frame = 0


Query: 2   SSTAAAHGLLF---LLLLRSVS---GQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 61
           SS    H LLF   LLLL+SV    GQ+   P       +T+ +  + V++ +L   +FF
Sbjct: 8   SSRWIPHNLLFLLLLLLLQSVPYGFGQTQTTPP---GTTKTKPNDPVVVVITVLFLVIFF 67

Query: 62  MAFFSVYIRHCNDSPSAAAATTLRPTAAG------RSRRAT-RGLDPALIETFPTLIYSE 121
           M F S++ R  N     + ++  R T A       R RR T RGLD   IETFPT +YSE
Sbjct: 68  MVFGSIFCRRSN--AQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSE 127

Query: 122 VKEHKIGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNP 181
           VK  +IGK  +ECAVCL EFEDDETLRL+P C HVFH +C+D WL+ HSTCP+CRADL  
Sbjct: 128 VKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL-- 187

Query: 182 PPLTESAHRVTESDHLEP-AETRPDDVALEPDPQPASPLPDVD---LESKA-LNRNRTRG 241
             L +      + D  E  + T P  ++   DP+    L   D   L++    N N T  
Sbjct: 188 -VLNQQG---DDDDSTESYSGTDPGTISSSTDPERGMVLESSDAHLLDAVTWSNSNITPR 247

Query: 242 SRSTRL-RW-----LFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMV 301
           S+ST L  W     LFPRSHSTGHSL+QP  + +RFTLRLP +VR+QL+  K +R    V
Sbjct: 248 SKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSRTMGHV 307

Query: 302 VLARQSSSMR-GYRFGSGEGSSRGRY-YRRLERLDRTSKSDRWILSVTPPFFTRMSSMKT 356
            L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R  S+++
Sbjct: 308 ALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRSGSVRS 358

[Close]

BLAST of Sed0019371.1 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.6e-46
Identity = 129/349 (36.96%), Postives = 183/349 (52.44%), Query Frame = 0


Query: 12  FLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFFMAFFSVYIRHCNDSPS 71
           FLLLL  V    ++      D  +T  S + A+I+++L++  F +   SVY+R C     
Sbjct: 13  FLLLLLEV----VVASSEFDDEGRTSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHAL 72

Query: 72  AAAATTLRPTAAGRSRRATRGLDPALIETFPTLIYSEVKEHKIGKSALECAVCLSEFEDD 131
              +           +    GLD ++IETFPT  YS VK  +IGK ALEC VCL+EFEDD
Sbjct: 73  GMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDD 132

Query: 132 ETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPP-------LTESAHRVTESDHL 191
           ETLRLIP+C HVFHP CIDAWL S +TCP+CRA+L P P       +   A    ++   
Sbjct: 133 ETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLR 192

Query: 192 EPAETRPDDVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRWLFPRSHSTGHSLV 251
            P +     V   PD +         ++S A   N++   +S    W     +S   S  
Sbjct: 193 TPIDDNRKRVLTSPDERL--------IDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPG 252

Query: 252 QPGEDTERFTLRLPVEVRKQLVNRKLNRATS--MVVLARQSSSMRGYRFGSGEGSSRGRY 311
           QP E+ +R+TLRLP E+  QLVN  L +  S   + L ++ SS+RG+R GS  G+ +  +
Sbjct: 253 QPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTGS-LGTEKNYF 312

Query: 312 YRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRGGEAGSGSG 352
           Y   ER D+  + DR   S+TPP+ TR  S+++P    N  G     +G
Sbjct: 313 Y--FERFDQDGRLDRRPFSITPPYHTR--SIQSPDEIINASGNYQDRAG 344

[Close]

BLAST of Sed0019371.1 vs. ExPASy TrEMBL
Match: A0A0A0LFQ4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.3e-142
Identity = 284/385 (73.77%), Postives = 309/385 (80.26%), Query Frame = 0


Query: 1   MSSTAAAHG-----LLFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 60
           M S  A HG     LLFL L  SVS QS   PDPR DP Q ++SGSMAVI+VILIAALFF
Sbjct: 97  MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 156

Query: 61  MAFFSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHK 120
           MAFFSVYIRHCNDS S     T+RP   AAGRSRRATRGLDPA+IETFPTLIYS+VKEHK
Sbjct: 157 MAFFSVYIRHCNDSQS----NTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 216

Query: 121 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 180
           IGKSALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+ P LTE
Sbjct: 217 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLS-PQLTE 276

Query: 181 SAHRVTESDHLEPAETRPDDVALEPD----PQPASPLPDVDLES--------KALNRNRT 240
           S HRV +S+ +  ++T   D+  +         A P   +  ES        KALNR RT
Sbjct: 277 SVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRT 336

Query: 241 RGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLAR 300
           RGSRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKLNRA SMVVLAR
Sbjct: 337 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLAR 396

Query: 301 QSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSN 360
           QSSSMRGYRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN
Sbjct: 397 QSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSN 456

Query: 361 RGGEAGSGS--GPENLTADSNLLPV 365
           R GE GSG   G  N   +S++LPV
Sbjct: 457 R-GEPGSGRELGQGNTAVESSMLPV 475

[Close]

BLAST of Sed0019371.1 vs. ExPASy TrEMBL
Match: Q84KA9 (RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 1.1e-140
Identity = 281/385 (72.99%), Postives = 307/385 (79.74%), Query Frame = 0


Query: 1   MSSTAAAHGL-----LFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 60
           M S  A HGL     L L L  SVS Q    PDPR DP Q ++SGSMAVI+VILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHK 120
           MAFFSVYIRHCNDSPS     T+RP   AAGRSRRATRGLDPA+IETFPTLIYS+VKEHK
Sbjct: 61  MAFFSVYIRHCNDSPS----NTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 120

Query: 121 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 180
           IGKSALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+P P T+
Sbjct: 121 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQP-TD 180

Query: 181 SAHRVTESDHLEPAETRPDDVALEPD----PQPASPLPDVDLES--------KALNRNRT 240
           S HR  +S+ +  ++T   D+  + +       A P   +  ES        KALNR RT
Sbjct: 181 SVHRADDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQIQTESELSTTTSNKALNRTRT 240

Query: 241 RGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLAR 300
           RGSRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKL+RATSMVVLAR
Sbjct: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLAR 300

Query: 301 QSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSN 360
           QSSSMRGYRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN
Sbjct: 301 QSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSN 360

Query: 361 RGGEAGSGS--GPENLTADSNLLPV 365
           R  E GSG   G  N   DS+ LPV
Sbjct: 361 R-AEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of Sed0019371.1 vs. ExPASy TrEMBL
Match: A0A1S3C0V4 (E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo OX=3656 GN=LOC103495208 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 1.1e-140
Identity = 281/385 (72.99%), Postives = 307/385 (79.74%), Query Frame = 0


Query: 1   MSSTAAAHGL-----LFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 60
           M S  A HGL     L L L  SVS Q    PDPR DP Q ++SGSMAVI+VILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHK 120
           MAFFSVYIRHCNDSPS     T+RP   AAGRSRRATRGLDPA+IETFPTLIYS+VKEHK
Sbjct: 61  MAFFSVYIRHCNDSPS----NTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 120

Query: 121 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 180
           IGKSALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+P P T+
Sbjct: 121 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQP-TD 180

Query: 181 SAHRVTESDHLEPAETRPDDVALEPD----PQPASPLPDVDLES--------KALNRNRT 240
           S HR  +S+ +  ++T   D+  + +       A P   +  ES        KALNR RT
Sbjct: 181 SVHRADDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQIQTESELSTTTSNKALNRTRT 240

Query: 241 RGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLAR 300
           RGSRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKL+RATSMVVLAR
Sbjct: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLAR 300

Query: 301 QSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSN 360
           QSSSMRGYRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN
Sbjct: 301 QSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSN 360

Query: 361 RGGEAGSGS--GPENLTADSNLLPV 365
           R  E GSG   G  N   DS+ LPV
Sbjct: 361 R-AEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of Sed0019371.1 vs. ExPASy TrEMBL
Match: A0A5A7U133 (E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00060 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.4e-140
Identity = 280/385 (72.73%), Postives = 307/385 (79.74%), Query Frame = 0


Query: 1   MSSTAAAHGL-----LFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 60
           M S  A HGL     L L L  SVS Q    PDPR DP Q ++SGSMAVI+VILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSPSAAAATTLRP--TAAGRSRRATRGLDPALIETFPTLIYSEVKEHK 120
           MAFFSVYIRHCNDSPS     T+RP   AAGRSRRATRGLDPA+IETFPTLIYS+VKEHK
Sbjct: 61  MAFFSVYIRHCNDSPS----NTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 120

Query: 121 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 180
           IGKSALECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRA+L+P P T+
Sbjct: 121 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQP-TD 180

Query: 181 SAHRVTESDHLEPAETRPDDVALEPD----PQPASPLPDVDLES--------KALNRNRT 240
           S HR  +S+ +  ++T   D+  + +       A P   +  ES        K+LNR RT
Sbjct: 181 SVHRADDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQIQTESELSTTTSNKSLNRTRT 240

Query: 241 RGSRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLAR 300
           RGSRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVE+RKQ+VNRKL+RATSMVVLAR
Sbjct: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLAR 300

Query: 301 QSSSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSN 360
           QSSSMRGYRFGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGSN
Sbjct: 301 QSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSN 360

Query: 361 RGGEAGSGS--GPENLTADSNLLPV 365
           R  E GSG   G  N   DS+ LPV
Sbjct: 361 R-AEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of Sed0019371.1 vs. ExPASy TrEMBL
Match: A0A6J1KG60 (E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita maxima OX=3661 GN=LOC111493598 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 9.1e-140
Identity = 276/383 (72.06%), Postives = 309/383 (80.68%), Query Frame = 0


Query: 1   MSSTAAAHGLLFLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFFMAFFS 60
           M+S  A H  LF LL  SVS QS   PDPR DP Q ++SGSMAVI+VILIAALFF+AFFS
Sbjct: 1   MASFTAVHAALFFLLSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAFFS 60

Query: 61  VYIRHCNDSPSAAAATTLRP-TAAGRSRRATRGLDPALIETFPTLIYSEVKEHKIGKSAL 120
           VY+RHCNDS S     ++RP TAA RSRRA RGLDPA+IETFPTLIYS+VKEHKIGKS L
Sbjct: 61  VYLRHCNDSQS----NSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKEHKIGKSTL 120

Query: 121 ECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAHRVT 180
           ECAVCL+EFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRA+L+ P LTES HRV 
Sbjct: 121 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLS-PQLTESVHRVE 180

Query: 181 ES-------DHLEPAETRPDDVALEPDPQPASPLPDVDLES---------KALNRNRTRG 240
           +S       ++    E + +DV  E +P  A P   + +ES         KALNRNRTRG
Sbjct: 181 DSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIHIPVESELNTTTAANKALNRNRTRG 240

Query: 241 SRSTRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLARQS 300
           SRS RLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+E+RKQ+VNRKLNRATSMV+LARQS
Sbjct: 241 SRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQS 300

Query: 301 SSMRGYRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRG 360
           SS+RGY+FGSGEGSSRG+YYRRLERLDRTSKSDRW+LS+TPPFFTRMSSMKTPRGGS   
Sbjct: 301 SSIRGYQFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIH- 360

Query: 361 GEAGSGS--GPENLTADSNLLPV 365
           GE G G   G  N TA+S+ LPV
Sbjct: 361 GEPGLGRELGQGNSTAESSRLPV 377

[Close]

BLAST of Sed0019371.1 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 270.0 bits (689), Expect = 2.8e-72
Identity = 177/398 (44.47%), Postives = 222/398 (55.78%), Query Frame = 0


Query: 10  LLFLLLLRSVS-GQSLLPPDPRFDP-NQTQISGSMAVIVVILIAALFFMAFFSVYIRHCN 69
           ++FLL+L S     S   P P   P N  ++S +MAVIVVILIAALFFM FFS+Y RHC+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 70  DSPSAAAATTLRPTAAGRSR----RATRGLDPALIETFPTLIYSEVKEHKIGKSALECAV 129
             P A  +    P    RSR     A RGLD +++ETFPT +YS+VK  K+GK  LECA+
Sbjct: 75  GVPDAGVS----PAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAI 134

Query: 130 CLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAHRVTESDH 189
           CL+EFEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRA+L        A +V E + 
Sbjct: 135 CLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL--------AEQVAEGES 194

Query: 190 LEPAETRPD----DVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRWLFPRSHST 249
           +EP  T PD     V + P+P   +P+P+  L +  ++  R  G      R  F RSH+T
Sbjct: 195 VEPGGTEPDLELQQVVVNPEPVVTAPVPE-QLVTSEVDSRRLPGVPVDLKRVKFSRSHTT 254

Query: 250 GHSLVQPGEDTERFTLRLPVEVRKQLV-NRKLNRATSMVVLARQSSSMRG---------- 309
           GHS+VQPGE TERFTLRLP +VRK+++ + KLNR  S++VL R  SS RG          
Sbjct: 255 GHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKPIDRSRARS 314

Query: 310 --------------------YRFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFT 365
                                R G+  GS R          D     DRW       F  
Sbjct: 315 DRWLFRKTPSFLWRSRDDGSIRLGA-TGSVRASAVPNSTGSDSVRAGDRWAFLRNASFLW 374

[Close]

BLAST of Sed0019371.1 vs. TAIR 10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1 )

HSP 1 Score: 246.1 bits (627), Expect = 4.3e-65
Identity = 165/361 (45.71%), Postives = 203/361 (56.23%), Query Frame = 0


Query: 10  LLFLLLLRSVSGQSLLPPDPRFDP--NQTQISGSMAVIVVILIAALFFMAFFSVYIRHCN 69
           +L L LL SVS      PD R DP      +S +MAV+VV++IAALFFM FF+VYIRHC 
Sbjct: 11  VLVLFLLLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCT 70

Query: 70  DSPSAAAATTLRPTAAGRSRRAT-----RGLDPALIETFPTLIYSEVKEHKIGKSALECA 129
            +   +        A G  RR T     RGLD   IETFPT +YSEVK  KIGK ALECA
Sbjct: 71  GAVDGSVT-----PAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECA 130

Query: 130 VCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTESAHRVTESD 189
           +CL+EFEDDETLRL+PKCDHVFHP CI AWL  H TCPVCR +L     T     V E+D
Sbjct: 131 ICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL--AEQTPEPEVVVETD 190

Query: 190 HLEPAETRPDDVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRWLFPRSHSTGHS 249
                        LE   Q A P+P V+L                  R  FPRSH+TGHS
Sbjct: 191 -------------LEAQQQSAVPVPVVELP-----------------RVKFPRSHTTGHS 250

Query: 250 LVQPGEDTERFTLRLPVEVRKQLV-NRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGR 309
           +V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ VL R  SS  G             
Sbjct: 251 VVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSG------------- 310

Query: 310 YYRRLERLDRT-SKSDRWILSVTPPFFTRM---SSMKTPRGGSNRGGEAGSGSGPENLTA 359
                +++DR+ +KSDRW+   TP F  R     S++    GS RG    S SG +++ A
Sbjct: 311 -----KQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGGTGSVRGNSVTSPSG-DSVRA 315

[Close]

BLAST of Sed0019371.1 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 212.6 bits (540), Expect = 5.2e-55
Identity = 155/366 (42.35%), Postives = 204/366 (55.74%), Query Frame = 0


Query: 10  LLFLLLLRS------VSGQS------LLPPDPRFDPNQTQISGSMAVIVVILIAALFFMA 69
           LLFLLLL S      V+GQ+      +     RFDP       +MA+++++L++  FF+ 
Sbjct: 26  LLFLLLLSSHGGFKFVAGQATHGGSDVSGDSSRFDP-------TMAILMIVLVSVFFFLG 85

Query: 70  FFSVYIRHCNDSPSAAAATTLRPTAAGR----SRRATRGLDPALIETFPTLIYSEVKEHK 129
           FFSVYIR C +           P  AG     +R+  RGLD ++IETFPT  YS VK  +
Sbjct: 86  FFSVYIRRCLE--RVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLR 145

Query: 130 IGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPPLTE 189
           IGK ALEC+VCL+EFEDDETLRLIPKC HVFHP CIDAWL SH+TCP+CRADL P P   
Sbjct: 146 IGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGES 205

Query: 190 SAHRVTESDHLEPAETRPDDVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRW-- 249
                      +P  + P+   +     P + L    +ES AL  N++   RS    W  
Sbjct: 206 IVSIQIPGLVNDPPGSDPNGDRIRSLGSPDARL----IESVALTCNQSMPRRSMSTGWNL 265

Query: 250 --LFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMVVLARQSSSMRGY 309
             +F  S  TG    Q  E+ +RFTLRLP ++  +LVN  L++    V L +  SS RGY
Sbjct: 266 AGMFTNSDRTG----QHSENLDRFTLRLPQDIHNKLVNPNLSKV--HVALPQVMSSTRGY 325

Query: 310 RFGSGEGSSRGRYYRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRGGEAGSG 356
           R GS  GS R  +Y   ER D+  + DR   S+TPP+ T   +  +P GGS  GG+    
Sbjct: 326 RTGS-LGSERNYFY--YERFDQDGRLDRRPFSITPPYRTSSINHMSP-GGS--GGDKVRA 366

[Close]

BLAST of Sed0019371.1 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-49
Identity = 156/380 (41.05%), Postives = 209/380 (55.00%), Query Frame = 0


Query: 2   SSTAAAHGLLF---LLLLRSVS---GQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFF 61
           SS    H LLF   LLLL+SV    GQ+   P       +T+ +  + V++ +L   +FF
Sbjct: 8   SSRWIPHNLLFLLLLLLLQSVPYGFGQTQTTPP---GTTKTKPNDPVVVVITVLFLVIFF 67

Query: 62  MAFFSVYIRHCNDSPSAAAATTLRPTAAG------RSRRAT-RGLDPALIETFPTLIYSE 121
           M F S++ R  N     + ++  R T A       R RR T RGLD   IETFPT +YSE
Sbjct: 68  MVFGSIFCRRSN--AQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSE 127

Query: 122 VKEHKIGKSALECAVCLSEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNP 181
           VK  +IGK  +ECAVCL EFEDDETLRL+P C HVFH +C+D WL+ HSTCP+CRADL  
Sbjct: 128 VKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL-- 187

Query: 182 PPLTESAHRVTESDHLEP-AETRPDDVALEPDPQPASPLPDVD---LESKA-LNRNRTRG 241
             L +      + D  E  + T P  ++   DP+    L   D   L++    N N T  
Sbjct: 188 -VLNQQG---DDDDSTESYSGTDPGTISSSTDPERGMVLESSDAHLLDAVTWSNSNITPR 247

Query: 242 SRSTRL-RW-----LFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQLVNRKLNRATSMV 301
           S+ST L  W     LFPRSHSTGHSL+QP  + +RFTLRLP +VR+QL+  K +R    V
Sbjct: 248 SKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSRTMGHV 307

Query: 302 VLARQSSSMR-GYRFGSGEGSSRGRY-YRRLERLDRTSKSDRWILSVTPPFFTRMSSMKT 356
            L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R  S+++
Sbjct: 308 ALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRSGSVRS 358

[Close]

BLAST of Sed0019371.1 vs. TAIR 10
Match: AT1G22500.1 (RING/U-box superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 6.8e-47
Identity = 129/349 (36.96%), Postives = 183/349 (52.44%), Query Frame = 0


Query: 12  FLLLLRSVSGQSLLPPDPRFDPNQTQISGSMAVIVVILIAALFFMAFFSVYIRHCNDSPS 71
           FLLLL  V    ++      D  +T  S + A+I+++L++  F +   SVY+R C     
Sbjct: 13  FLLLLLEV----VVASSEFDDEGRTSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHAL 72

Query: 72  AAAATTLRPTAAGRSRRATRGLDPALIETFPTLIYSEVKEHKIGKSALECAVCLSEFEDD 131
              +           +    GLD ++IETFPT  YS VK  +IGK ALEC VCL+EFEDD
Sbjct: 73  GMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDD 132

Query: 132 ETLRLIPKCDHVFHPECIDAWLASHSTCPVCRADLNPPP-------LTESAHRVTESDHL 191
           ETLRLIP+C HVFHP CIDAWL S +TCP+CRA+L P P       +   A    ++   
Sbjct: 133 ETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLR 192

Query: 192 EPAETRPDDVALEPDPQPASPLPDVDLESKALNRNRTRGSRSTRLRWLFPRSHSTGHSLV 251
            P +     V   PD +         ++S A   N++   +S    W     +S   S  
Sbjct: 193 TPIDDNRKRVLTSPDERL--------IDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPG 252

Query: 252 QPGEDTERFTLRLPVEVRKQLVNRKLNRATS--MVVLARQSSSMRGYRFGSGEGSSRGRY 311
           QP E+ +R+TLRLP E+  QLVN  L +  S   + L ++ SS+RG+R GS  G+ +  +
Sbjct: 253 QPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTGS-LGTEKNYF 312

Query: 312 YRRLERLDRTSKSDRWILSVTPPFFTRMSSMKTPRGGSNRGGEAGSGSG 352
           Y   ER D+  + DR   S+TPP+ TR  S+++P    N  G     +G
Sbjct: 313 Y--FERFDQDGRLDRRPFSITPPYHTR--SIQSPDEIINASGNYQDRAG 344

The following BLAST results are available for this feature:

BLAST of Sed0019371.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888961.1	2.8e-143	75.40	E3 ubiquitin-protein ligase ATL6-like [Benincasa hispida]	[more]
XP_004139190.1	6.9e-142	73.77	E3 ubiquitin-protein ligase ATL6 [Cucumis sativus] >KAE8651591.1 hypothetical pr...	[more]
XP_008454907.2	2.2e-140	72.99	PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo] >AAO45753.1 RING/c3HC...	[more]
KAA0047946.1	4.9e-140	72.73	E3 ubiquitin-protein ligase ATL6 [Cucumis melo var. makuwa]	[more]
XP_022999119.1	1.9e-139	72.06	E3 ubiquitin-protein ligase ATL6-like [Cucurbita maxima]	[more]

BLAST of Sed0019371.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXX9	3.9e-71	44.47	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q8LGA5	6.0e-64	45.71	E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ...	[more]
Q84W40	7.4e-54	42.35	RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2	[more]
O64763	3.5e-48	41.05	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]
Q9SK92	9.6e-46	36.96	E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ...	[more]

BLAST of Sed0019371.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFQ4	3.3e-142	73.77	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 P...	[more]
Q84KA9	1.1e-140	72.99	RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE...	[more]
A0A1S3C0V4	1.1e-140	72.99	E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo OX=3656 GN=LOC103495208 PE=4 SV...	[more]
A0A5A7U133	2.4e-140	72.73	E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A6J1KG60	9.1e-140	72.06	E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita maxima OX=3661 GN=LOC11149359...	[more]

BLAST of Sed0019371.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05200.1	2.8e-72	44.47	RING/U-box superfamily protein	[more]
AT5G27420.1	4.3e-65	45.71	carbon/nitrogen insensitive 1	[more]
AT1G72200.1	5.2e-55	42.35	RING/U-box superfamily protein	[more]
AT2G35000.1	2.5e-49	41.05	RING/U-box superfamily protein	[more]
AT1G22500.1	6.8e-47	36.96	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 121..162 e-value: 5.9E-6 score: 35.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 120..163 e-value: 4.9E-14 score: 52.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 121..163 score: 12.84335
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 81..169 e-value: 6.6E-22 score: 79.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..223
None	No IPR available	PANTHER	PTHR14155:SF544	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 11..303
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 11..303
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 120..163 e-value: 3.82425E-21 score: 83.5135
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 106..169

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0019371	Sed0019371	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019371.1-five_prime_utr	Sed0019371.1-five_prime_utr-LG08:31920548..31920773	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019371.1-exon	Sed0019371.1-exon-LG08:31920548..31922065	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019371.1-cds	Sed0019371.1-cds-LG08:31920774..31921868	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019371.1-three_prime_utr	Sed0019371.1-three_prime_utr-LG08:31921869..31922065	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0019371.1	Sed0019371.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane