Sed0017907.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGTTATCTTATTGTATATATTTAGAGTTTTGAGTGATAGATATGTACCTAATGGCTATGGCTATGGCTGCGACGGGTGAGTGCAAAAATATGGCCATGGTGGTTTGACAAACCCACAAACAATAGAGAGAATTGGAATTGGAATTGGAATAGGAATATTGTATTCTAAACTGGACATGTTTCAGCTCTGTCTTATGGCTTCCACCGGATACCCTTCCGCCCTTGTTTTACACCACAGCTCGTCCACCCCAATCAAGGTACACCCACCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTCCCCTATTTTCATATCTGTATATATAATTCTCCTCATTTACTTCTCACAGGATTCTCACCCTTTCTTCTCAGTATGTGAAACTCCCATCGGATTGCGAAATATTCAGCCTCAACAGACCCATGAGCCATGGACCCATCAATTACTCGACCTTGACCTAAAACTTCCAACCCCCAAAATGCTCGATGCGCAAGGTTAGTTGCTTTCCTAGTTTCTATACCCCAGTCTCAACCGGCATCTATGACTCACTTCCTCCTCTGATTTGGTTGCAGACAATCACACAGACTCTTTGCTATTCAGTTCTACCAACGATGAACAATTCAAAAGGTGCAACCATGTCTTGGAGTTCCTTGTGCCATCTCCAAGTGAAGAGAATAATAACAAACGCTCATTAGATTTACCACACTTGAGGAGGAGGGGGTTGCAAGAAATGAAGACCCACCACAAAGGCCTCTTTGCTTCTTCTCTTTTCTTTCCTGCCTCTGAGTTTGATGCGCATCTACCAGTCAGGGACTTCCTAAGCGAATTGATTAGCAGCTCAAAGATTACCATTCATCCCGATGGGCAGATTTTGTTCACCCAGACTGGAACAGAGATCAAGGATTTACTTTCAATTGTTGCTGAGTTTTATTTCTCAAATAACTCATTGAGCTGGAGAAAGCACTCAATTCTTGTCCCAAACTATGTTAGGTACATAATTTCTCTACCTATATTATTATCAATGAAAAGTTTGTTTCTCATTAATATGTTTATACAGTTATCTACACACATACACTATTGGTTTCTGAATAGTAATTTGACAGACGCAGTATTCCACCCATGTATTCGCACCAACATTTTTTCGTTCTACATTCATGATGTTGGAGTGTGAGTAATTCTCCTCTCTCACTCATGCACATTTCTGCACTTCACCAGTTATTAGTTTGTCTGGCAAAATGATAAGGGCTTCACTTTTCTGAGAGTCTAAAATATATGGTTGGTATTTTGTTAAAGTTTGTGCCCAAGTTGTTCTTTCTCTGTGCTGGAACAATAAAATTCATATACTATTTTCTATTTTCCAACAAGTGGGAAAATTCACCAGTAAATGAGTTTTCATGCAAAACGTCAGATTTTGATTAATATTTATGAAGAATTGTTGAAACAATGACATACATAGCTAAATAGAAGTTACTATTATAACTCTTTAGCCTAGAGTACAATCCAACTTAACCGTAGTTATCTTATTTTCTCGTACAAGCTAGCAACTAGCAAGATATTGAAGAAGGTTAAGTGCTTTGAAGTTTCATTTTCTACTTGTCTTCATAATTAAAGAGGAACATCATTGCGAACTCACAGTACTGTTATTTTTCTTTTTTTTATTGTTACTTTTACTAGAAATAGGTTCTTATCATGATAAGATATTTTGGATAAACAATGTAACCATTGAAATCCTCTATCTTAACAAATTTGAGACCTTAGACAAGATAGATGGATGTAAGCTAAGACTGCAAGCATTCTGTGTCCAGGTTGAATGGTGAAGTGGGAAGCCATGTTTATGATCCTTCCGTGAAGCTTCATGCAACAACAATTGCTCCTATAAAGAGGTATGTGCAGCATGCCTACTCATATAAGTCTTATTCTTTTCTCTCGTCTATTGTTGAGCAGCAACCACTTAACCTTGCTGCAATGTAAGTTCAATTGCTGCATATTCTTTCATGATTGCGTTCAACCGGAGATGTCTAGACAAAAGTAAGATCACAGAAGCGTAGAAAATGAATATGATTCTATTTCTACTGAATAATTTTCTTGATTGTTTAATTCTATTGACGTGGTAGTTATTTTTCTAGAGTGACGGCCTTTTCTGATAGAAATGCTTCAGGTGTATACACCATAGGTAAACAAAGCTTATCAGGACTGGAGTAGCATAAGGTTAGGAGTGCTCAATCCTATCAGAAGTAGGATAAGAATACGAGATTATAAATAAGAAAGGGTGGAGAAGGAAAAAACATATTAAGAAACATTGATATAGTGAGTGGTTAAGGCTTGCGGATGATCTCAAGATAAAAGAAGGGTTCAATTACCTTCGACACTCGAATTATCTTGTGGCTCTAAAAACACTCGTGTTATCTTTTCACATCTATACATTTTTTTGTTCATATCAATTTGGTTCCGGAGTGGTATCATTTTCTCTCTCTTGAAAACGTGGCTTTTCTCTGCCCAAACAGTTTTGTGGAGAAAAAAAACTACCAATGCTGACCACATGTTTTTTTGGAGTGATATTTTTTATCCTTCGCGGACAAAAAGGAAAAAAACAAAACAAACTATTGCCATCAGGTGTTTAATGGGCAGAGTAGTCTAAATATCGTAGAACAACAACCAATCAATGTTAGCCTTTCATTTTGCTGATGAAATTTGCTTGTTTTTTTTTAGACTTACAGAACTCCTGTTTGTGTATTTGACAGCCCTGATACAGTGAAGGTGAAGCCATCACGAAAAAGGAGAATGAGTAAGAAAGTAGGGCGTGAGAGAGATCTGTACAAGAGAAATTATTTCCACGCATGCGAGAGCCTCCTATCCTATATGTTCAACAAGCAGCGGCATGGGAAAAGGGCAATACTGTGTTTAAAGAATTGTGGGCGAGAGCTTCCTGAGCTTCTTACTCAGTTGTCTGCTGGTATTGCTGGGACTGGTCTTGTTGTCATTCTCTCTGTCATGTGTAAGCTTGCTTGGGGAAGAGTGCCATTCTGTTCTTCTCAACTTCTGAACACTGGATTTGGTGTGGGTCTGGTTTGGCTATCTTGTGCTGTGAACAAACTGAGGGATACAATAATCTGCATCAGCAAGAAAGCAGGCAAGGTCGGGTTGAAGGAAGACGAGATGACGAGGAGAGTGGATAAGAGCGTAAATGAGATCTTCTTCAGAGCGGCAGCTATAATGACAGTAGCAATCTTGAGAATTGGTTAGCTGATACTGATGTAAGTGTAGAGTTGGTGGTTAGCTTAACCACGAGTGTGCAAAAAACTGAATCATTCTGGGCACTGAGCTCAGCTTCTTGTGTCTGTTTGGTTGGTTCTGTTGGGGGTTTACACTGTCAAATATTTGAAACAGATCGCAGGAGTAGTAATTAGTAATACAATTTTGTTCTTTAAACGTGTTTGTTTTCCCTCTCCTCTTTAGATTCGAGTACTAGACAACAAGGCAAGAGGAACACACAACGTCAAACGAGCTCGAGCGAGAATACAACAGATCAACACCCACCTCTCTCACTCCCCTTTCTAGTTTTTTTTTTTTTTGTTTGAAAAATCAAATATTATGAAAGCTAAATACTGATATCTGGGTCACAAATTCTGAAGTTGAAATAGAATAATATTAAACAAGACAACTAAGTATGCTACCAGTCCATTCG GTGTTATCTTATTGTATATATTTAGAGTTTTGAGTGATAGATATGTACCTAATGGCTATGGCTATGGCTGCGACGGGTGAGTGCAAAAATATGGCCATGGTGGTTTGACAAACCCACAAACAATAGAGAGAATTGGAATTGGAATTGGAATAGGAATATTGTATTCTAAACTGGACATGTTTCAGCTCTGTCTTATGGCTTCCACCGGATACCCTTCCGCCCTTGTTTTACACCACAGCTCGTCCACCCCAATCAAGTATGTGAAACTCCCATCGGATTGCGAAATATTCAGCCTCAACAGACCCATGAGCCATGGACCCATCAATTACTCGACCTTGACCTAAAACTTCCAACCCCCAAAATGCTCGATGCGCAAGACAATCACACAGACTCTTTGCTATTCAGTTCTACCAACGATGAACAATTCAAAAGGTGCAACCATGTCTTGGAGTTCCTTGTGCCATCTCCAAGTGAAGAGAATAATAACAAACGCTCATTAGATTTACCACACTTGAGGAGGAGGGGGTTGCAAGAAATGAAGACCCACCACAAAGGCCTCTTTGCTTCTTCTCTTTTCTTTCCTGCCTCTGAGTTTGATGCGCATCTACCAGTCAGGGACTTCCTAAGCGAATTGATTAGCAGCTCAAAGATTACCATTCATCCCGATGGGCAGATTTTGTTCACCCAGACTGGAACAGAGATCAAGGATTTACTTTCAATTGTTGCTGAGTTTTATTTCTCAAATAACTCATTGAGCTGGAGAAAGCACTCAATTCTTGTCCCAAACTATGTTAGGTTGAATGGTGAAGTGGGAAGCCATGTTTATGATCCTTCCGTGAAGCTTCATGCAACAACAATTGCTCCTATAAAGAGCCCTGATACAGTGAAGGTGAAGCCATCACGAAAAAGGAGAATGAGTAAGAAAGTAGGGCGTGAGAGAGATCTGTACAAGAGAAATTATTTCCACGCATGCGAGAGCCTCCTATCCTATATGTTCAACAAGCAGCGGCATGGGAAAAGGGCAATACTGTGTTTAAAGAATTGTGGGCGAGAGCTTCCTGAGCTTCTTACTCAGTTGTCTGCTGGTATTGCTGGGACTGGTCTTGTTGTCATTCTCTCTGTCATGTGTAAGCTTGCTTGGGGAAGAGTGCCATTCTGTTCTTCTCAACTTCTGAACACTGGATTTGGTGTGGGTCTGGTTTGGCTATCTTGTGCTGTGAACAAACTGAGGGATACAATAATCTGCATCAGCAAGAAAGCAGGCAAGGTCGGGTTGAAGGAAGACGAGATGACGAGGAGAGTGGATAAGAGCGTAAATGAGATCTTCTTCAGAGCGGCAGCTATAATGACAGTAGCAATCTTGAGAATTGGTTAGCTGATACTGATGTAAGTGTAGAGTTGGTGGTTAGCTTAACCACGAGTGTGCAAAAAACTGAATCATTCTGGGCACTGAGCTCAGCTTCTTGTGTCTGTTTGGTTGGTTCTGTTGGGGGTTTACACTGTCAAATATTTGAAACAGATCGCAGGAGTAGTAATTAGTAATACAATTTTGTTCTTTAAACGTGTTTGTTTTCCCTCTCCTCTTTAGATTCGAGTACTAGACAACAAGGCAAGAGGAACACACAACGTCAAACGAGCTCGAGCGAGAATACAACAGATCAACACCCACCTCTCTCACTCCCCTTTCTAGTTTTTTTTTTTTTTGTTTGAAAAATCAAATATTATGAAAGCTAAATACTGATATCTGGGTCACAAATTCTGAAGTTGAAATAGAATAATATTAAACAAGACAACTAAGTATGCTACCAGTCCATTCG ATGCTCGATGCGCAAGACAATCACACAGACTCTTTGCTATTCAGTTCTACCAACGATGAACAATTCAAAAGGTGCAACCATGTCTTGGAGTTCCTTGTGCCATCTCCAAGTGAAGAGAATAATAACAAACGCTCATTAGATTTACCACACTTGAGGAGGAGGGGGTTGCAAGAAATGAAGACCCACCACAAAGGCCTCTTTGCTTCTTCTCTTTTCTTTCCTGCCTCTGAGTTTGATGCGCATCTACCAGTCAGGGACTTCCTAAGCGAATTGATTAGCAGCTCAAAGATTACCATTCATCCCGATGGGCAGATTTTGTTCACCCAGACTGGAACAGAGATCAAGGATTTACTTTCAATTGTTGCTGAGTTTTATTTCTCAAATAACTCATTGAGCTGGAGAAAGCACTCAATTCTTGTCCCAAACTATGTTAGGTTGAATGGTGAAGTGGGAAGCCATGTTTATGATCCTTCCGTGAAGCTTCATGCAACAACAATTGCTCCTATAAAGAGCCCTGATACAGTGAAGGTGAAGCCATCACGAAAAAGGAGAATGAGTAAGAAAGTAGGGCGTGAGAGAGATCTGTACAAGAGAAATTATTTCCACGCATGCGAGAGCCTCCTATCCTATATGTTCAACAAGCAGCGGCATGGGAAAAGGGCAATACTGTGTTTAAAGAATTGTGGGCGAGAGCTTCCTGAGCTTCTTACTCAGTTGTCTGCTGGTATTGCTGGGACTGGTCTTGTTGTCATTCTCTCTGTCATGTGTAAGCTTGCTTGGGGAAGAGTGCCATTCTGTTCTTCTCAACTTCTGAACACTGGATTTGGTGTGGGTCTGGTTTGGCTATCTTGTGCTGTGAACAAACTGAGGGATACAATAATCTGCATCAGCAAGAAAGCAGGCAAGGTCGGGTTGAAGGAAGACGAGATGACGAGGAGAGTGGATAAGAGCGTAAATGAGATCTTCTTCAGAGCGGCAGCTATAATGACAGTAGCAATCTTGAGAATTGGTTAG MLDAQDNHTDSLLFSSTNDEQFKRCNHVLEFLVPSPSEENNNKRSLDLPHLRRRGLQEMKTHHKGLFASSLFFPASEFDAHLPVRDFLSELISSSKITIHPDGQILFTQTGTEIKDLLSIVAEFYFSNNSLSWRKHSILVPNYVRLNGEVGSHVYDPSVKLHATTIAPIKSPDTVKVKPSRKRRMSKKVGRERDLYKRNYFHACESLLSYMFNKQRHGKRAILCLKNCGRELPELLTQLSAGIAGTGLVVILSVMCKLAWGRVPFCSSQLLNTGFGVGLVWLSCAVNKLRDTIICISKKAGKVGLKEDEMTRRVDKSVNEIFFRAAAIMTVAILRIG Homology
BLAST of Sed0017907.1 vs. NCBI nr
Match: XP_008449465.1 (PREDICTED: uncharacterized protein LOC103491343 [Cucumis melo] >KAA0057287.1 uncharacterized protein E6C27_scaffold280G001280 [Cucumis melo var. makuwa] >TYK13445.1 uncharacterized protein E5676_scaffold496G00670 [Cucumis melo var. makuwa]) HSP 1 Score: 476.5 bits (1225), Expect = 1.9e-130 Identity = 246/338 (72.78%), Postives = 283/338 (83.73%), Query Frame = 0
BLAST of Sed0017907.1 vs. NCBI nr
Match: XP_038888370.1 (uncharacterized protein LOC120078216 [Benincasa hispida]) HSP 1 Score: 473.8 bits (1218), Expect = 1.2e-129 Identity = 246/338 (72.78%), Postives = 279/338 (82.54%), Query Frame = 0
BLAST of Sed0017907.1 vs. NCBI nr
Match: XP_004140087.1 (uncharacterized protein LOC101221139 [Cucumis sativus] >KGN47878.1 hypothetical protein Csa_003575 [Cucumis sativus]) HSP 1 Score: 464.9 bits (1195), Expect = 5.8e-127 Identity = 242/338 (71.60%), Postives = 278/338 (82.25%), Query Frame = 0
BLAST of Sed0017907.1 vs. NCBI nr
Match: XP_022967418.1 (uncharacterized protein LOC111466962 [Cucurbita maxima]) HSP 1 Score: 461.8 bits (1187), Expect = 4.9e-126 Identity = 240/338 (71.01%), Postives = 277/338 (81.95%), Query Frame = 0
BLAST of Sed0017907.1 vs. NCBI nr
Match: XP_023554065.1 (uncharacterized protein LOC111811444 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 461.1 bits (1185), Expect = 8.4e-126 Identity = 239/338 (70.71%), Postives = 276/338 (81.66%), Query Frame = 0
BLAST of Sed0017907.1 vs. ExPASy TrEMBL
Match: A0A5A7URL6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00670 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 9.3e-131 Identity = 246/338 (72.78%), Postives = 283/338 (83.73%), Query Frame = 0
BLAST of Sed0017907.1 vs. ExPASy TrEMBL
Match: A0A1S3BM37 (uncharacterized protein LOC103491343 OS=Cucumis melo OX=3656 GN=LOC103491343 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 9.3e-131 Identity = 246/338 (72.78%), Postives = 283/338 (83.73%), Query Frame = 0
BLAST of Sed0017907.1 vs. ExPASy TrEMBL
Match: A0A0A0KEA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409350 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.8e-127 Identity = 242/338 (71.60%), Postives = 278/338 (82.25%), Query Frame = 0
BLAST of Sed0017907.1 vs. ExPASy TrEMBL
Match: A0A6J1HV14 (uncharacterized protein LOC111466962 OS=Cucurbita maxima OX=3661 GN=LOC111466962 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 2.4e-126 Identity = 240/338 (71.01%), Postives = 277/338 (81.95%), Query Frame = 0
BLAST of Sed0017907.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ46 (uncharacterized protein LOC111464023 OS=Cucurbita moschata OX=3662 GN=LOC111464023 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.9e-124 Identity = 236/338 (69.82%), Postives = 276/338 (81.66%), Query Frame = 0
BLAST of Sed0017907.1 vs. TAIR 10
Match: AT4G02920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 199.1 bits (505), Expect = 5.5e-51 Identity = 134/344 (38.95%), Postives = 205/344 (59.59%), Query Frame = 0
BLAST of Sed0017907.1 vs. TAIR 10
Match: AT4G02920.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 199.1 bits (505), Expect = 5.5e-51 Identity = 134/344 (38.95%), Postives = 205/344 (59.59%), Query Frame = 0
BLAST of Sed0017907.1 vs. TAIR 10
Match: AT1G03340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02920.1); Has 44 Blast hits to 41 proteins in 13 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 179.9 bits (455), Expect = 3.5e-45 Identity = 116/338 (34.32%), Postives = 180/338 (53.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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