Sed0017179.1 (mRNA) Chayote v1

Overview


Name	Sed0017179.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	RNA 3' terminal phosphate cyclase, putative
Location	LG08: 23339731 .. 23344723 (-)
Sequence length	1574
RNA-Seq Expression	Sed0017179.1
Synteny	Sed0017179.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCTAATAAAAAGGAAAACATCTCACTTCCGTTTTCAGTAGCGGGGTGTCGCCGCCGCTTCAGACGTCGCCACCGTCGTGCAGCCGCACTGATCTTACAGTTTGTTTCTTTCATAGGTATTTCCTCAATCTCAGCCACTATCTGTTTCTTGTCGAATAACTGGTCGAATTTCTTCTTGAATGATAATAGCCCAATAGAAGCCGAATCCATTTAATTTTTGGTGTTCTGTGTTAGGGTTTAGGCCAAGGGAGAGAAAATGCTGAAGACGAAGTACAAGCGGCTGAAGGGAAGCCAAATGCTAAGGCAAAGGTTGTTGCTAGCAACGCTAAGTCGCACTCCAGTTCTAATCGAGGACATTCGGACCGACCAGACCTGGCCCGGCCTTCGACCCCACGAGGTCTCTTTTCTCCGACTGTTAGACAAACTTTGCGATGATTGCTTTATCGAAATCAATGAGACCGGTACACGATAACCCTCCTTCCAAATTCCATCCTTCCTTCAAGTTTTTTTTTTTTTGCATTTAATTTTGTTTTTTCTTGCTTGAAGGCACAAAATTGAAGTACAAGCCTGGGATTGTGATGGGTGGGAGACACTTGGTGCATGATTGTGGTGTTAGTCGTGCTATTGGTTATTTTCTTGACCCATTGATTCTTCTGGCTTTGTTTGGTAGGAAACCCCTCTCCATTAAGCTCAAAGGTTAGTCAACATTTTTTTTTCTTACTGTTTGTTTTCATTTCATTTTGGTTTCTTCAAGTTTAGCAATAATTTGTATTATTTGAGTGCTCTAGAATGACACTAGTTGAAGTTTTACTGTAGAGTAGTATTTTAATGCTTGGACTTATCAATCTCATATTTTTCATTGCACTCACCAGATATAATGAACGGAAAATTGCACAAACCACCCTCATCGATGGGGTTTGTAACAATTACATCCTTAAACTATTAATTTGATTAATTACATTCCTTAAAGTTTGATAAGTGTTCCCATGTACTCCCAAAATTAAATTTAAATATTATAATAGAGGGTATAATTGTCAAATAAAATTAATGTTTGATTGTCATATCCAAAACATGGGTGATAACCCTCATGAGATTCCAGTTTCCTCTAATTTCCTTTGAGATGCGATGATTTTCACATTTTTCTCTACTATCAAGATTGACTTTTGAACGCTGTAAGTTTTATGAGCAAATCATGTGGACTGGAAGTTGGAGCGCCGTTAGAACAGAGTTGCCGAGATTGAACAGAGAATCGAGTGAAGAGAAAGAGAGAAGGGTGAGGCAATAAGAGTTTGTATTTTTGGAAATAAAAAAAGGCGGAAATGATTGGACGTCAATTTTATGGTTGTGATGCTCGACTGATTTGTGGCTGAAAAATTTTGAGGGCTTAAAAAATTAGCCATCGTTGAGTTTAGACCTCTGTTCGTTCATTGTTGAGGACAAGTTTAAGTGTTAGATGAGATTGAAAACTTACTTTCAAGGTTTCTGGGTAGATAACATAATGAAAAGTTGCTGAATAGTCAATGTTTTCAAAGACTAGAGGCGGTCTTGAGACTTTTTCTCTTCAAGAGGTGAGGCGTAAGTCTTGAGGCAATATGAGACGTAAGTCTCAATTTTAATTAAAAATGTCCCCAAATGGTGGAACATTGGTTGAAGACTTGGGCTTTGAGGGTATGTTCGGTCCTAGGTTCGAGACTCACCTGTGACACTACTCCTTTGATGTTTCCGGTGTATAGCCTAGGAACAGGTGTGATCACCTTGTTTCAAAAAAATTAGAAATATTATAAAACATCTTAATTTGTGTAAACATGTATGGTAAGACATAATGCTTATGTAAAAGTACATAAAACATAACAACAACATTAATGGGATTGAGTTTTTTGGAATAAAAAACAATTTGATTGATGAATAAAACATAAGTGAATTCTCCAAGCACCTATAATGAATACAACAAAGAACTCCAAAAACGATGCTAGAGGAAAATGCAACAAATTATCAAAATTGACAATTCTAAAACAATTGTGTTTTTCTAACAAAAGAATCCATAAGAGATAATCTATATTGTTATGGTTCAAACCCTTATATTATAACAATGAAAAATATGAATATTGTTCTTCTAGTTATTCTATGAGGCGTAAGCCTCTTATGATCTAAGAGAGGCGTAGGAATCGAGGCTAAAAGTTAGAGCCTCGCCATGAGGTGCGTATGCCTCAATAGCCTTTTGAAACATGGGGAATAGTTAATCGGACCACATGATCTGCACGTGATAAAACTTATAGCGTTTAGGAGTCAATCTTGATAATAGAAAAAAATGTGAAAATTATTGCATCCGGAAGGAAATTAGAGGAGACTAGAATCTCATTGGGGTCATCTCCCTTGTTTTGGGTATGACGATGATAGAAGAGTTCACTTTTTTTTATTTGAAAATTTTACCTTCTTTTATAATATTTAAATTTAATTTTGAGAGTACATTGCAACACTTATCAAAATTTAAGGGATGTAATTGATTAAATTAATAGTTTAAGGGGGTAATTGTTACAAACCCCATAGTTTAAGGATGGTTTGTACTTTGTGCAATTTTCCTCATAATGTATTATGGTTACTTAAAGAAAATTCTTCCTCTTTTTTAATTTTTTGTATAATGATACAGTTTCAATCTAGTTAACTAGTATTCTTCTTTTTTAGGTATTACGAATGATTCGAAGGACCCATCAGTAGATACTTTCAAATCAACTACATTTACAATGTTAAAACACTTCGGAGTTGATGAAAAACAAGTGGTCTTGAAAATAGAAAGTCGTGGAGTACCACCTCATGGTGGTGGAGAAGTGACTTTAACCATTCCAACGGTTAAAAGTTTATCGGTGAGTTAAATCATTTTATATATCATCATGGTATTAGACATATTCTCTTGTGCATTGAACAATTCACATCTACTTGATTGTATCTGTGAGTTACATCTTACAGGAGGTTGTTGATGTTAATTATACAGGCAGTATCTTGGACTGATGAAGGAATGGTTAAAAGCATTAGGGGAGTTTCATTTTCAACTAGAGTTTCTTCTCAGTTTGAGCATGCCATGATAACTGCGGCTCGTGGAGTGTTTAATCGTTTGCTTCCAGATGTGTACATATCCACTGATCATCGAAAGGGACCTCAAGCTGGAAAGTATGCTTTCTTTCTGCTTTGAATTCATTTATTCCCAGTTCCATCATTGATTGGTTATATCGTTAGTTTTTAAAAGGATTTGAATTGCAGTTCACCTGGGTTTGGCATTTCACTCGTTGCGGAAACTACCGAAGGTTGTTTTATATCTGCTGATACGACGGTTTCATATGGACATGCTGAAGAATCAACTGAGTTTGAAGAAGAGAAGAAAGAGCTTCCACCTCCTGAAGATATTGGTGAGCAGATGGCTTCTGCTCTTCTTGGTGAGATTAGTCAGGGTGGCGTAGTTGACTCCACGCACCAGGTTAGAATTCTCTAACATTCTGTTTGATGACAATTTTGTTTCAAGTTGTATGCCTTTGAATTTTATGCTTATTTTCACTTAATTTCCTTACTGTGATTTTCACCTTTCTTTAAGAAATGTTTGAATTCTTGTCAAACTTCAAAAACAATAGCAAGTTTCAAATAACTACTTTTGGTTTCCAGGACTCTCTCTTGATTGTTTTTATAACATTTGGTAGAATAATCATAACAAAAAAAGACTTCTAGGTGCAAATAGTGTTTATTATAAGCTTTATTTTCAAAAACCAAAATACAAAGAGATTAGTCGAGGCTTGAACTCTTCTAGACTTGATTTCCTAGAGTTTCTGTTGAATTTCTTTACTGGGTTGAAATCTCTTCGATGTTAAATCCAAAGTATCACAGATTCATATATACGAAACTATTAGTTTCTGTCTCCATGTCTGTAATTCGATGACGCCCAAATGAATATTAGTGGGCAAAAGTGTAAAGTGCGGGCCTTTGGGTGGGTAAGAAGGTAATTGTAGGGCAAACTTTAATTGATATTAGGAGGGGAAAATGACGGCTAGTTTTGCCTTCGGGCTTATAATAGTTACTGGAGCCTCTGTTCTTCAGGGGTGGTGCGGTAGCCGAAGGTTTGGATTTTGAAGGTGTGTTCTCCTCAAGGTCCTTGGTTTGAGACTTACTTGTGATATTAATTTGTAAACATCTCTCATTTCTCTATTCCTTTGATGTCTCTCGGTGCCTGAGCTAGGGACAAGCGTGGTTATCTTGGAAATAGTTTACTCCAGCGTCCTAAGCGGGAGCTTTGTTGGTAAAGTCTTGAGTTATGTTTCCTTGATGTAGGTTCGAAACTCATACACGTGCTTAATTATAAAATTTCTTATTGATTTTTGGGTCTGTGTCTTGGAATGGGTGCAAGTGCCTCGAGTATGGAGTGTGGCAAAGCTCTGATTTCCAGTTATAATAAAAAATAGAGCAAGTCTGTGACCACATCCATGTTTGGGTTTGTGCAGGGATTATTGTTTCTTCTTTGTGCGTTATGCCCAGCAGACGTTTCGAAGATCCGGGTTGGAAAGCTGACGCCATATGGGATAGAAACCCTCAGAAACATTGAAGACTTCTTGAAGGTAATGTTTAATATTGTACCAGATCCTTCCAATGGAACTGTCGTCCTGAAATGTGTTGGTTGTGGGATGACTAACCTATCCAAAAAGCACTCCTAAATATGCTACTCCAAACTTGGAGCAAATTTCGAAGACTTATTGGCGCCCATCAATCTGGGCAGCTTGATTTAAGTTTGTACATTGATCAATTTAGAAGTTGAGAGTAAAAAAGGGGAGCATGTGTATTCTAAGATTTGGTTACACAACAATTTTGTTTTGCGTTTTAATTACGGTTGAGACTTTTCCCTTGGTGGGTGCTAGAATTAAGAGAAATACTTGACTCCTTATTTAGGATGATGTCACGAAATTTTTATTTGAACAATGTTGAAAAGAAGAATGAAAAAATTTGTTAGAGGGC

mRNA sequence

AAAACCCTAATAAAAAGGAAAACATCTCACTTCCGTTTTCAGTAGCGGGGTGTCGCCGCCGCTTCAGACGTCGCCACCGTCGTGCAGCCGCACTGATCTTACAGTTTGTTTCTTTCATAGGGTTTAGGCCAAGGGAGAGAAAATGCTGAAGACGAAGTACAAGCGGCTGAAGGGAAGCCAAATGCTAAGGCAAAGGTTGTTGCTAGCAACGCTAAGTCGCACTCCAGTTCTAATCGAGGACATTCGGACCGACCAGACCTGGCCCGGCCTTCGACCCCACGAGGTCTCTTTTCTCCGACTGTTAGACAAACTTTGCGATGATTGCTTTATCGAAATCAATGAGACCGGCACAAAATTGAAGTACAAGCCTGGGATTGTGATGGGTGGGAGACACTTGGTGCATGATTGTGGTGTTAGTCGTGCTATTGGTTATTTTCTTGACCCATTGATTCTTCTGGCTTTGTTTGGTAGGAAACCCCTCTCCATTAAGCTCAAAGGTATTACGAATGATTCGAAGGACCCATCAGTAGATACTTTCAAATCAACTACATTTACAATGTTAAAACACTTCGGAGTTGATGAAAAACAAGTGGTCTTGAAAATAGAAAGTCGTGGAGTACCACCTCATGGTGGTGGAGAAGTGACTTTAACCATTCCAACGGTTAAAAGTTTATCGGCAGTATCTTGGACTGATGAAGGAATGGTTAAAAGCATTAGGGGAGTTTCATTTTCAACTAGAGTTTCTTCTCAGTTTGAGCATGCCATGATAACTGCGGCTCGTGGAGTGTTTAATCGTTTGCTTCCAGATGTGTACATATCCACTGATCATCGAAAGGGACCTCAAGCTGGAAATTCACCTGGGTTTGGCATTTCACTCGTTGCGGAAACTACCGAAGGTTGTTTTATATCTGCTGATACGACGGTTTCATATGGACATGCTGAAGAATCAACTGAGTTTGAAGAAGAGAAGAAAGAGCTTCCACCTCCTGAAGATATTGGTGAGCAGATGGCTTCTGCTCTTCTTGGTGAGATTAGTCAGGGTGGCGTAGTTGACTCCACGCACCAGGGATTATTGTTTCTTCTTTGTGCGTTATGCCCAGCAGACGTTTCGAAGATCCGGGTTGGAAAGCTGACGCCATATGGGATAGAAACCCTCAGAAACATTGAAGACTTCTTGAAGGTAATGTTTAATATTGTACCAGATCCTTCCAATGGAACTGTCGTCCTGAAATGTGTTGGTTGTGGGATGACTAACCTATCCAAAAAGCACTCCTAAATATGCTACTCCAAACTTGGAGCAAATTTCGAAGACTTATTGGCGCCCATCAATCTGGGCAGCTTGATTTAAGTTTGTACATTGATCAATTTAGAAGTTGAGAGTAAAAAAGGGGAGCATGTGTATTCTAAGATTTGGTTACACAACAATTTTGTTTTGCGTTTTAATTACGGTTGAGACTTTTCCCTTGGTGGGTGCTAGAATTAAGAGAAATACTTGACTCCTTATTTAGGATGATGTCACGAAATTTTTATTTGAACAATGTTGAAAAGAAGAATGAAAAAATTTGTTAGAGGGC

Coding sequence (CDS)

ATGCTGAAGACGAAGTACAAGCGGCTGAAGGGAAGCCAAATGCTAAGGCAAAGGTTGTTGCTAGCAACGCTAAGTCGCACTCCAGTTCTAATCGAGGACATTCGGACCGACCAGACCTGGCCCGGCCTTCGACCCCACGAGGTCTCTTTTCTCCGACTGTTAGACAAACTTTGCGATGATTGCTTTATCGAAATCAATGAGACCGGCACAAAATTGAAGTACAAGCCTGGGATTGTGATGGGTGGGAGACACTTGGTGCATGATTGTGGTGTTAGTCGTGCTATTGGTTATTTTCTTGACCCATTGATTCTTCTGGCTTTGTTTGGTAGGAAACCCCTCTCCATTAAGCTCAAAGGTATTACGAATGATTCGAAGGACCCATCAGTAGATACTTTCAAATCAACTACATTTACAATGTTAAAACACTTCGGAGTTGATGAAAAACAAGTGGTCTTGAAAATAGAAAGTCGTGGAGTACCACCTCATGGTGGTGGAGAAGTGACTTTAACCATTCCAACGGTTAAAAGTTTATCGGCAGTATCTTGGACTGATGAAGGAATGGTTAAAAGCATTAGGGGAGTTTCATTTTCAACTAGAGTTTCTTCTCAGTTTGAGCATGCCATGATAACTGCGGCTCGTGGAGTGTTTAATCGTTTGCTTCCAGATGTGTACATATCCACTGATCATCGAAAGGGACCTCAAGCTGGAAATTCACCTGGGTTTGGCATTTCACTCGTTGCGGAAACTACCGAAGGTTGTTTTATATCTGCTGATACGACGGTTTCATATGGACATGCTGAAGAATCAACTGAGTTTGAAGAAGAGAAGAAAGAGCTTCCACCTCCTGAAGATATTGGTGAGCAGATGGCTTCTGCTCTTCTTGGTGAGATTAGTCAGGGTGGCGTAGTTGACTCCACGCACCAGGGATTATTGTTTCTTCTTTGTGCGTTATGCCCAGCAGACGTTTCGAAGATCCGGGTTGGAAAGCTGACGCCATATGGGATAGAAACCCTCAGAAACATTGAAGACTTCTTGAAGGTAATGTTTAATATTGTACCAGATCCTTCCAATGGAACTGTCGTCCTGAAATGTGTTGGTTGTGGGATGACTAACCTATCCAAAAAGCACTCCTAA

Protein sequence

MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDDCFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGITNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAVSWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPGFGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQGGVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTVVLKCVGCGMTNLSKKHS

Homology

[Close]

BLAST of Sed0017179.1 vs. NCBI nr
Match: XP_023002386.1 (probable RNA 3'-terminal phosphate cyclase-like protein [Cucurbita maxima])

HSP 1 Score: 701.4 bits (1809), Expect = 4.1e-198
Identity = 346/377 (91.78%), Postives = 362/377 (96.02%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           MLKTKYKRLKGSQ+LRQRLLLATLS TPVLIEDIRTD+TWPGLRPHEVSFLRL++K+CDD
Sbjct: 1   MLKTKYKRLKGSQILRQRLLLATLSHTPVLIEDIRTDETWPGLRPHEVSFLRLMEKICDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
            FIEINETGTKLKYKPGIVMGGRHLVHDCG SRAIGYFL+PLI+LALFGRKPLSI LKGI
Sbjct: 61  SFIEINETGTKLKYKPGIVMGGRHLVHDCGTSRAIGYFLEPLIVLALFGRKPLSINLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTFKSTT  MLKHFGVD K VVLKIESRGVPPHGGGEVTLT+PTVKSLSA+
Sbjct: 121 TNDSKDPSVDTFKSTTLPMLKHFGVDLKDVVLKIESRGVPPHGGGEVTLTLPTVKSLSAI 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWT+EGMVKSIRGVSFSTRVSSQFEHAMIT+ARGVFNRLLPDV+I TDHRKGPQAGNSPG
Sbjct: 181 SWTEEGMVKSIRGVSFSTRVSSQFEHAMITSARGVFNRLLPDVHIFTDHRKGPQAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT+GCFISADTTVSYGHA ESTEFEEEKKELPPPEDIGEQMA ALLGEI+QG
Sbjct: 241 FGISLVAETTKGCFISADTTVSYGHAGESTEFEEEKKELPPPEDIGEQMAYALLGEINQG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCPADVSK+RVGKLTPYGIETLRNIEDFLKVMFNI  DPSNGTV
Sbjct: 301 GVVDSTHQGLLFLLCALCPADVSKVRVGKLTPYGIETLRNIEDFLKVMFNIEADPSNGTV 360

Query: 361 VLKCVGCGMTNLSKKHS 378
           VLKCVG GM NLS+KHS
Sbjct: 361 VLKCVGSGMINLSRKHS 377

[Close]

BLAST of Sed0017179.1 vs. NCBI nr
Match: XP_023537462.1 (probable RNA 3'-terminal phosphate cyclase-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 700.3 bits (1806), Expect = 9.2e-198
Identity = 345/377 (91.51%), Postives = 362/377 (96.02%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           MLK+KYKRLKGSQ+LRQRLLLATLS TPVLIEDIRTD+TWPGLRPHEVSFLRL++K+CDD
Sbjct: 1   MLKSKYKRLKGSQILRQRLLLATLSHTPVLIEDIRTDETWPGLRPHEVSFLRLMEKICDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
            FIEINETGTKLKYKPGIVMGGRHLVHDCG SRAIGYFL+PLI+LALFGRKPLSI LKGI
Sbjct: 61  SFIEINETGTKLKYKPGIVMGGRHLVHDCGTSRAIGYFLEPLIVLALFGRKPLSINLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTFKSTT  MLKHFGVD K VVLKIESRGVPPHGGGEVTLT+PTVKSLSA+
Sbjct: 121 TNDSKDPSVDTFKSTTLPMLKHFGVDLKDVVLKIESRGVPPHGGGEVTLTLPTVKSLSAI 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWT+EGMVKSIRGVSFSTRVSSQFEHAMIT+ARGVFNRLLPDV+I TDHRKGPQAGNSPG
Sbjct: 181 SWTEEGMVKSIRGVSFSTRVSSQFEHAMITSARGVFNRLLPDVHIFTDHRKGPQAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT+GCFISADTTVSYGHA ESTEFEEEKKELPPPEDIGEQMA ALLGEI+QG
Sbjct: 241 FGISLVAETTKGCFISADTTVSYGHAGESTEFEEEKKELPPPEDIGEQMAYALLGEINQG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCPADVSK+RVGKLTPYGIETLRNIEDFLKVMFNI  DPSNGTV
Sbjct: 301 GVVDSTHQGLLFLLCALCPADVSKVRVGKLTPYGIETLRNIEDFLKVMFNIEADPSNGTV 360

Query: 361 VLKCVGCGMTNLSKKHS 378
           VLKCVG GM NLS+KHS
Sbjct: 361 VLKCVGSGMVNLSRKHS 377

[Close]

BLAST of Sed0017179.1 vs. NCBI nr
Match: XP_022951428.1 (probable RNA 3'-terminal phosphate cyclase-like protein [Cucurbita moschata] >XP_022951429.1 probable RNA 3'-terminal phosphate cyclase-like protein [Cucurbita moschata] >KAG6585410.1 putative RNA 3'-terminal phosphate cyclase-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 700.3 bits (1806), Expect = 9.2e-198
Identity = 345/377 (91.51%), Postives = 362/377 (96.02%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           MLKTKYKRLKGSQ+LRQRLLLATLS TPVLIEDIRTD+TWPGLRPHEVSFLRL++K+CDD
Sbjct: 1   MLKTKYKRLKGSQILRQRLLLATLSHTPVLIEDIRTDETWPGLRPHEVSFLRLMEKICDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
            FIEINETGTKLKYKPGIVMGGRHLVHDCG SRAIGYFL+PLI+LALFGRKPLSI LKGI
Sbjct: 61  SFIEINETGTKLKYKPGIVMGGRHLVHDCGTSRAIGYFLEPLIVLALFGRKPLSINLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTFKSTT  MLKHFGVD K VVLKIESRGVPPHGGGEVTLT+PTVKSLSA+
Sbjct: 121 TNDSKDPSVDTFKSTTLPMLKHFGVDLKDVVLKIESRGVPPHGGGEVTLTLPTVKSLSAI 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWT+EGMVKSIRGVSFSTRVSSQFEHAMIT+ARGVFNRLLPDV+I TDHRKGPQAGNSPG
Sbjct: 181 SWTEEGMVKSIRGVSFSTRVSSQFEHAMITSARGVFNRLLPDVHIFTDHRKGPQAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT+GCFISADTTVSYGHA ESTEFEEEKKELPPPEDIGEQMA ALLGEI+QG
Sbjct: 241 FGISLVAETTKGCFISADTTVSYGHAGESTEFEEEKKELPPPEDIGEQMAYALLGEINQG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCPADVSK+RVGKLTPYGIETLRNI+DFLKVMFNI  DPSNGTV
Sbjct: 301 GVVDSTHQGLLFLLCALCPADVSKVRVGKLTPYGIETLRNIDDFLKVMFNIEADPSNGTV 360

Query: 361 VLKCVGCGMTNLSKKHS 378
           VLKCVG GM NLS+KHS
Sbjct: 361 VLKCVGSGMINLSRKHS 377

[Close]

BLAST of Sed0017179.1 vs. NCBI nr
Match: XP_022142004.1 (probable RNA 3'-terminal phosphate cyclase-like protein [Momordica charantia])

HSP 1 Score: 654.1 bits (1686), Expect = 7.5e-184
Identity = 326/377 (86.47%), Postives = 347/377 (92.04%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           MLKTKYKRL+GSQ LRQRL+LATLSRT VLIEDIR D+T+PGLRPHEVSFLRLL+K+ DD
Sbjct: 1   MLKTKYKRLQGSQTLRQRLVLATLSRTSVLIEDIRADETFPGLRPHEVSFLRLLEKVSDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
           C IEINETGTKLKYKPGIVMGGRHLVHDCGVSR++GYFL+PLILLALF RKPL+IKLKGI
Sbjct: 61  CTIEINETGTKLKYKPGIVMGGRHLVHDCGVSRSLGYFLEPLILLALFARKPLTIKLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTFKSTT  MLKHFGVD K+V LKIE RGVPPHGGGEVTLT+PTVKSLSAV
Sbjct: 121 TNDSKDPSVDTFKSTTLPMLKHFGVDLKEVDLKIEGRGVPPHGGGEVTLTMPTVKSLSAV 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWTDEGMVK IRGV+FSTRVSSQFEHAMITAARGVFNRLLPDV+I TDHRKG  AGNSPG
Sbjct: 181 SWTDEGMVKRIRGVTFSTRVSSQFEHAMITAARGVFNRLLPDVHIFTDHRKGSLAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT GC +SADTTVSYGHAEE+TEFEEEKK+L PP DIGEQMA ALLGEI QG
Sbjct: 241 FGISLVAETTSGCLMSADTTVSYGHAEETTEFEEEKKQLSPPADIGEQMAFALLGEIEQG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCP DVSK+RVGKLTPYGIETLRNI +FL VMF I P+PSNGTV
Sbjct: 301 GVVDSTHQGLLFLLCALCPEDVSKVRVGKLTPYGIETLRNILEFLGVMFKITPEPSNGTV 360

Query: 361 VLKCVGCGMTNLSKKHS 378
            L CVG GM NLS+KHS
Sbjct: 361 ELLCVGSGMYNLSRKHS 377

[Close]

BLAST of Sed0017179.1 vs. NCBI nr
Match: XP_038878466.1 (probable RNA 3'-terminal phosphate cyclase-like protein [Benincasa hispida])

HSP 1 Score: 606.3 bits (1562), Expect = 1.8e-169
Identity = 301/376 (80.05%), Postives = 332/376 (88.30%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           M+KTKYK LKGSQ+LRQRL+LATLSRTPV I DIR +   PGLRP+E SFL LL+K+CDD
Sbjct: 1   MVKTKYKELKGSQILRQRLVLATLSRTPVRIYDIRPNTISPGLRPYEKSFLDLLEKVCDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
           CFI+INETGT LKYKPGIVMGGR+LVHDCG+SR+IGYFL+PLILLALFGRKPLSIKLKGI
Sbjct: 61  CFIDINETGTSLKYKPGIVMGGRNLVHDCGLSRSIGYFLEPLILLALFGRKPLSIKLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTF+STT  MLK FGV+   V LKIESRGVPPHGGGEV LTI +VKS SAV
Sbjct: 121 TNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIESRGVPPHGGGEVILTISSVKSFSAV 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWTDEG+VK IRGVSFSTRVSSQFEHAMITAARGVFNRLLPDV+I TDHRKGP+AGNSPG
Sbjct: 181 SWTDEGLVKRIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVHIGTDHRKGPRAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT  C IS DT VSYG+AEE+TEFEEEK+ELP PED+GE MA ALL +I  G
Sbjct: 241 FGISLVAETTTDCLISVDTAVSYGYAEETTEFEEEKQELPNPEDVGEDMAFALLNDIKNG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCP DVSK+RVG++TPYGI TLRNIE+FLKV F+I PD SN T+
Sbjct: 301 GVVDSTHQGLLFLLCALCPKDVSKVRVGEITPYGIATLRNIEEFLKVTFHIEPDHSNHTI 360

Query: 361 VLKCVGCGMTNLSKKH 377
           +LKCVG  + N S KH
Sbjct: 361 LLKCVGYDLKNFSMKH 376

[Close]

BLAST of Sed0017179.1 vs. ExPASy Swiss-Prot
Match: Q9C578 (Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g22100 PE=2 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.1e-140
Identity = 243/371 (65.50%), Postives = 299/371 (80.59%), Query Frame = 0


Query: 7   KRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDDCFIEIN 66
           K++KGSQ  RQRLLL+TLS TP+ I++IR D+T PGLRPHEV+ LRLL+ + DD  ++IN
Sbjct: 5   KKMKGSQSFRQRLLLSTLSSTPISIDEIRADETIPGLRPHEVNLLRLLEIVTDDAVVDIN 64

Query: 67  ETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGITNDSKD 126
           ETGT+LKYKPG ++GG++LVH C +SR+IGY+L+PL+LL LFG+KPLSI+LKGITND +D
Sbjct: 65  ETGTRLKYKPGTIVGGKNLVHSCSLSRSIGYYLEPLLLLGLFGKKPLSIRLKGITNDPRD 124

Query: 127 PSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAVSWTDEG 186
            SVDTF+STT  ++K FGV  + + LKIE+RGV P+GGGEV LT+P +K+LSAV W +EG
Sbjct: 125 ASVDTFRSTTLNIIKRFGVPAEDLELKIEARGVAPNGGGEVLLTVPNIKTLSAVHWVEEG 184

Query: 187 MVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPGFGISLV 246
           MVK IRG +FSTRV+S FEH+M  AARG+FN LLPDV+I  DHR G QAG SPG+GISL 
Sbjct: 185 MVKKIRGTTFSTRVTSDFEHSMRFAARGIFNNLLPDVHIFQDHRAGAQAGKSPGYGISLA 244

Query: 247 AETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQGGVVDST 306
           AETT GCFISADTTVS    +E+ E + EKKE  P ED G ++AS LL EI +GGVVDST
Sbjct: 245 AETTTGCFISADTTVSCERPDETGELDVEKKERSPAEDTGVEVASWLLQEIEKGGVVDST 304

Query: 307 HQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTVVLKCVG 366
           HQGLLFLLCAL   DVSK+RVG L+PY +ETLRNI++FL V F I PDP  GTV+LKC G
Sbjct: 305 HQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIKEFLGVKFAIKPDPLTGTVILKCTG 364

Query: 367 CGMTNLSKKHS 378
            G+ NLS+K S
Sbjct: 365 SGLINLSRKLS 375

[Close]

BLAST of Sed0017179.1 vs. ExPASy Swiss-Prot
Match: Q54S38 (Probable RNA 3'-terminal phosphate cyclase-like protein OS=Dictyostelium discoideum OX=44689 GN=rcl1 PE=1 SV=2)

HSP 1 Score: 345.9 bits (886), Expect = 5.8e-94
Identity = 165/367 (44.96%), Postives = 244/367 (66.49%), Query Frame = 0


Query: 8   RLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDDCFIEINE 67
           + +GS   RQR++ +TLS   + I +IR +   PGLR +E SFLRL+DK+ +   IEIN 
Sbjct: 3   KFQGSTHFRQRIICSTLSGKAIRITNIRDEDEKPGLRDYEASFLRLVDKITNGSKIEINS 62

Query: 68  TGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGITNDSKDP 127
           TGT++ Y PGI++GG+ + H+CG  R IGYF++ LI L  F + PL I L GITN+  D 
Sbjct: 63  TGTQITYIPGIIIGGKGITHECGTVRGIGYFVEALICLGPFAKAPLDITLNGITNNDIDL 122

Query: 128 SVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAVSWTDEGM 187
           ++DT ++TT  +++ FG++E  +++KI  RG PP+GGG V    P V  L A+   DEG 
Sbjct: 123 TIDTIRTTTLPIIRKFGIEE-GLIIKIIKRGAPPNGGGSVNFKCPIVPHLKAIQLIDEGK 182

Query: 188 VKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPGFGISLVA 247
           ++ IRG++++TR+S QF + ++  A+G+     PDVYIS+DH KG ++G SPG+G++LVA
Sbjct: 183 IRRIRGIAYATRISPQFSNRVLDKAKGLLLEYTPDVYISSDHYKGNESGLSPGYGLTLVA 242

Query: 248 ETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQGGVVDSTH 307
           ETT GC +SA+   + G A    + +++K     PED+GE+ A ALL EI  GG +DS +
Sbjct: 243 ETTTGCCLSAECMSNTGIATTEQQLQKQKSTSETPEDLGERTAFALLEEIFNGGCIDSHN 302

Query: 308 QGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTVVLKCVGC 367
           Q L  L   LCP D+SK+R+GK+TPY IE +R + DF  V F I PD ++ TV+  C+G 
Sbjct: 303 QSLALLFMVLCPEDISKVRLGKITPYTIEFIRQLRDFFGVTFKIEPDQNSKTVLFTCLGI 362

Query: 368 GMTNLSK 375
           G  N+++
Sbjct: 363 GYKNMAR 368

[Close]

BLAST of Sed0017179.1 vs. ExPASy Swiss-Prot
Match: Q9JJT0 (RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus OX=10090 GN=Rcl1 PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.6e-89
Identity = 177/370 (47.84%), Postives = 231/370 (62.43%), Query Frame = 0


Query: 11  GSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDDCFIEINETGT 70
           G   LRQRL+L+TLS  PV I  IR     PGLR  E SF+RLLDK+ +   IEIN+TGT
Sbjct: 12  GCNFLRQRLVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71

Query: 71  KLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGITNDSKDPSVD 130
            L Y+PG++ GG  + HDC V R IGY+L+ L+ LA F + PL I L+G+TND  DPSVD
Sbjct: 72  TLYYQPGLLYGG-SVEHDCSVLRGIGYYLEALLCLAPFMKHPLKIVLRGVTNDQVDPSVD 131

Query: 131 TFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAVSWTDEGMVKS 190
             K+T   +LK FG+D +   LKI  RG+PP GGGEV  + P  K L  V  TD G +K 
Sbjct: 132 VLKATALPLLKQFGIDGESFELKILRRGMPPGGGGEVLFSCPVRKVLKPVQLTDPGKIKR 191

Query: 191 IRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPGFGISLVAETT 250
           IRG+++S RVS Q  + ++ +AR + N+ +PD+YI TDH KG  +G SPGFG+SLVAETT
Sbjct: 192 IRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVSSGKSPGFGLSLVAETT 251

Query: 251 EGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQGGVVDSTHQGL 310
            G F+SA          E     + +     PED+G   A  LL EI +GG VDST+Q L
Sbjct: 252 NGTFLSA----------ELASNPQGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTNQSL 311

Query: 311 LFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDP------SNGTVVLKC 370
           + LL  L   DVSK+ +G L+PY IE LR+++ F +VMF +   P          V++ C
Sbjct: 312 VLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKVETKPCGEELKGGDKVLMTC 370

Query: 371 VGCGMTNLSK 375
           VG G +NLSK
Sbjct: 372 VGIGFSNLSK 370

[Close]

BLAST of Sed0017179.1 vs. ExPASy Swiss-Prot
Match: Q9Y2P8 (RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens OX=9606 GN=RCL1 PE=1 SV=3)

HSP 1 Score: 328.9 bits (842), Expect = 7.3e-89
Identity = 176/370 (47.57%), Postives = 230/370 (62.16%), Query Frame = 0


Query: 11  GSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDDCFIEINETGT 70
           G   LRQRL+L+TLS  PV I  IR     PGLR  E SF+RLLDK+ +   IEIN+TGT
Sbjct: 12  GCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71

Query: 71  KLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGITNDSKDPSVD 130
            L Y+PG++ GG  + HDC V R IGY+L+ L+ LA F + PL I L+G+TND  DPSVD
Sbjct: 72  TLYYQPGLLYGG-SVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 131

Query: 131 TFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAVSWTDEGMVKS 190
             K+T   +LK FG+D +   LKI  RG+PP GGGEV  + P  K L  +  TD G +K 
Sbjct: 132 VLKATALPLLKQFGIDGESFELKIVRRGMPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKR 191

Query: 191 IRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPGFGISLVAETT 250
           IRG+++S RVS Q  + ++ +AR + N+ +PD+YI TDH KG  +G SPGFG+SLVAETT
Sbjct: 192 IRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETT 251

Query: 251 EGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQGGVVDSTHQGL 310
            G F+SA          E     + +     PED+G   A  LL EI +GG VDST+Q L
Sbjct: 252 SGTFLSA----------ELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSL 311

Query: 311 LFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDP------SNGTVVLKC 370
             LL  L   DVSK+ +G L+PY IE LR+++ F ++MF I   P          V++ C
Sbjct: 312 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTC 370

Query: 371 VGCGMTNLSK 375
           VG G +NLSK
Sbjct: 372 VGIGFSNLSK 370

[Close]

BLAST of Sed0017179.1 vs. ExPASy Swiss-Prot
Match: Q2KHX8 (RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus OX=9913 GN=RCL1 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.4e-87
Identity = 174/370 (47.03%), Postives = 229/370 (61.89%), Query Frame = 0


Query: 11  GSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDDCFIEINETGT 70
           G   LRQRL+L+TLS  PV I  IR     PGLR  E SF+RLLDK+ +   IEIN+TGT
Sbjct: 12  GCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKVTNGSRIEINQTGT 71

Query: 71  KLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGITNDSKDPSVD 130
            L Y+PG++ GG  + HDC V R IGY+L+ L+ LA F + PL I L+G+TND  DPSVD
Sbjct: 72  TLYYQPGLLYGG-SMEHDCSVLRGIGYYLESLLCLAPFMKHPLRIVLRGVTNDQVDPSVD 131

Query: 131 TFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAVSWTDEGMVKS 190
             K+T   +LK FG+D +   LK+  RG+PP GGGEV  + P  K L  +   D G +K 
Sbjct: 132 VLKATALPLLKQFGIDGESFELKVVRRGMPPGGGGEVFFSCPVRKVLKPIQLIDPGKIKR 191

Query: 191 IRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPGFGISLVAETT 250
           IRG+++S RVS Q  + ++ +AR + N+ +PD+YI TDH KG  +G SPGFG+SLVAETT
Sbjct: 192 IRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGINSGKSPGFGLSLVAETT 251

Query: 251 EGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQGGVVDSTHQGL 310
            G F+SA          E     + +     PED+G   A  LL EI +GG VDST+Q L
Sbjct: 252 NGTFLSA----------ELASNPQGQGAAMLPEDLGRNCARLLLEEIYRGGCVDSTNQSL 311

Query: 311 LFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDP------SNGTVVLKC 370
             LL  L   DVSK+ +G L+PY IE LR+++ F ++MF I   P          V++ C
Sbjct: 312 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTC 370

Query: 371 VGCGMTNLSK 375
           VG G +NLSK
Sbjct: 372 VGIGFSNLSK 370

[Close]

BLAST of Sed0017179.1 vs. ExPASy TrEMBL
Match: A0A6J1KL59 (probable RNA 3'-terminal phosphate cyclase-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496243 PE=3 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.0e-198
Identity = 346/377 (91.78%), Postives = 362/377 (96.02%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           MLKTKYKRLKGSQ+LRQRLLLATLS TPVLIEDIRTD+TWPGLRPHEVSFLRL++K+CDD
Sbjct: 1   MLKTKYKRLKGSQILRQRLLLATLSHTPVLIEDIRTDETWPGLRPHEVSFLRLMEKICDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
            FIEINETGTKLKYKPGIVMGGRHLVHDCG SRAIGYFL+PLI+LALFGRKPLSI LKGI
Sbjct: 61  SFIEINETGTKLKYKPGIVMGGRHLVHDCGTSRAIGYFLEPLIVLALFGRKPLSINLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTFKSTT  MLKHFGVD K VVLKIESRGVPPHGGGEVTLT+PTVKSLSA+
Sbjct: 121 TNDSKDPSVDTFKSTTLPMLKHFGVDLKDVVLKIESRGVPPHGGGEVTLTLPTVKSLSAI 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWT+EGMVKSIRGVSFSTRVSSQFEHAMIT+ARGVFNRLLPDV+I TDHRKGPQAGNSPG
Sbjct: 181 SWTEEGMVKSIRGVSFSTRVSSQFEHAMITSARGVFNRLLPDVHIFTDHRKGPQAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT+GCFISADTTVSYGHA ESTEFEEEKKELPPPEDIGEQMA ALLGEI+QG
Sbjct: 241 FGISLVAETTKGCFISADTTVSYGHAGESTEFEEEKKELPPPEDIGEQMAYALLGEINQG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCPADVSK+RVGKLTPYGIETLRNIEDFLKVMFNI  DPSNGTV
Sbjct: 301 GVVDSTHQGLLFLLCALCPADVSKVRVGKLTPYGIETLRNIEDFLKVMFNIEADPSNGTV 360

Query: 361 VLKCVGCGMTNLSKKHS 378
           VLKCVG GM NLS+KHS
Sbjct: 361 VLKCVGSGMINLSRKHS 377

[Close]

BLAST of Sed0017179.1 vs. ExPASy TrEMBL
Match: A0A6J1GHN7 (probable RNA 3'-terminal phosphate cyclase-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454248 PE=3 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.4e-198
Identity = 345/377 (91.51%), Postives = 362/377 (96.02%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           MLKTKYKRLKGSQ+LRQRLLLATLS TPVLIEDIRTD+TWPGLRPHEVSFLRL++K+CDD
Sbjct: 1   MLKTKYKRLKGSQILRQRLLLATLSHTPVLIEDIRTDETWPGLRPHEVSFLRLMEKICDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
            FIEINETGTKLKYKPGIVMGGRHLVHDCG SRAIGYFL+PLI+LALFGRKPLSI LKGI
Sbjct: 61  SFIEINETGTKLKYKPGIVMGGRHLVHDCGTSRAIGYFLEPLIVLALFGRKPLSINLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTFKSTT  MLKHFGVD K VVLKIESRGVPPHGGGEVTLT+PTVKSLSA+
Sbjct: 121 TNDSKDPSVDTFKSTTLPMLKHFGVDLKDVVLKIESRGVPPHGGGEVTLTLPTVKSLSAI 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWT+EGMVKSIRGVSFSTRVSSQFEHAMIT+ARGVFNRLLPDV+I TDHRKGPQAGNSPG
Sbjct: 181 SWTEEGMVKSIRGVSFSTRVSSQFEHAMITSARGVFNRLLPDVHIFTDHRKGPQAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT+GCFISADTTVSYGHA ESTEFEEEKKELPPPEDIGEQMA ALLGEI+QG
Sbjct: 241 FGISLVAETTKGCFISADTTVSYGHAGESTEFEEEKKELPPPEDIGEQMAYALLGEINQG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCPADVSK+RVGKLTPYGIETLRNI+DFLKVMFNI  DPSNGTV
Sbjct: 301 GVVDSTHQGLLFLLCALCPADVSKVRVGKLTPYGIETLRNIDDFLKVMFNIEADPSNGTV 360

Query: 361 VLKCVGCGMTNLSKKHS 378
           VLKCVG GM NLS+KHS
Sbjct: 361 VLKCVGSGMINLSRKHS 377

[Close]

BLAST of Sed0017179.1 vs. ExPASy TrEMBL
Match: A0A6J1CKC1 (probable RNA 3'-terminal phosphate cyclase-like protein OS=Momordica charantia OX=3673 GN=LOC111012240 PE=3 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 3.7e-184
Identity = 326/377 (86.47%), Postives = 347/377 (92.04%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           MLKTKYKRL+GSQ LRQRL+LATLSRT VLIEDIR D+T+PGLRPHEVSFLRLL+K+ DD
Sbjct: 1   MLKTKYKRLQGSQTLRQRLVLATLSRTSVLIEDIRADETFPGLRPHEVSFLRLLEKVSDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
           C IEINETGTKLKYKPGIVMGGRHLVHDCGVSR++GYFL+PLILLALF RKPL+IKLKGI
Sbjct: 61  CTIEINETGTKLKYKPGIVMGGRHLVHDCGVSRSLGYFLEPLILLALFARKPLTIKLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTFKSTT  MLKHFGVD K+V LKIE RGVPPHGGGEVTLT+PTVKSLSAV
Sbjct: 121 TNDSKDPSVDTFKSTTLPMLKHFGVDLKEVDLKIEGRGVPPHGGGEVTLTMPTVKSLSAV 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWTDEGMVK IRGV+FSTRVSSQFEHAMITAARGVFNRLLPDV+I TDHRKG  AGNSPG
Sbjct: 181 SWTDEGMVKRIRGVTFSTRVSSQFEHAMITAARGVFNRLLPDVHIFTDHRKGSLAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT GC +SADTTVSYGHAEE+TEFEEEKK+L PP DIGEQMA ALLGEI QG
Sbjct: 241 FGISLVAETTSGCLMSADTTVSYGHAEETTEFEEEKKQLSPPADIGEQMAFALLGEIEQG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCP DVSK+RVGKLTPYGIETLRNI +FL VMF I P+PSNGTV
Sbjct: 301 GVVDSTHQGLLFLLCALCPEDVSKVRVGKLTPYGIETLRNILEFLGVMFKITPEPSNGTV 360

Query: 361 VLKCVGCGMTNLSKKHS 378
            L CVG GM NLS+KHS
Sbjct: 361 ELLCVGSGMYNLSRKHS 377

[Close]

BLAST of Sed0017179.1 vs. ExPASy TrEMBL
Match: A0A5D3C7I3 (Putative RNA 3'-terminal phosphate cyclase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00180 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 2.2e-168
Identity = 300/376 (79.79%), Postives = 331/376 (88.03%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           M KTKYK L+GSQ+LRQ+L+LATLSRTPV I+DIR +   PGLRP+E S L LL+K+CDD
Sbjct: 1   MGKTKYKELRGSQILRQKLVLATLSRTPVRIDDIRPNTISPGLRPYEKSLLDLLEKICDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
           CFI+INETGT LKYKPGIVMGGR+L HDCG++R+IGYFL+PLILLALFGRKPLSIKLKGI
Sbjct: 61  CFIDINETGTSLKYKPGIVMGGRNLEHDCGLTRSIGYFLEPLILLALFGRKPLSIKLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTF+STT  MLK FGV+   V LKIESRGVPP GGGEV LTIPTVKS SAV
Sbjct: 121 TNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIESRGVPPLGGGEVILTIPTVKSFSAV 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWTDEGMVK IRGVSFSTRVSSQFEHAMITAARGVFNRLLPDV+I TDHRKGP+AGNSPG
Sbjct: 181 SWTDEGMVKRIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVHIGTDHRKGPRAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT  C IS DT VSYG+ EE TEFEEEK+ELP PED+GE MA ALL +I +G
Sbjct: 241 FGISLVAETTTNCLISIDTAVSYGYGEEITEFEEEKQELPNPEDVGEGMAYALLNDIGKG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCP DVSK+RVG++TPYGIETLRNI DFLKVMF+I PDPS+ TV
Sbjct: 301 GVVDSTHQGLLFLLCALCPNDVSKVRVGEITPYGIETLRNIYDFLKVMFHIEPDPSSQTV 360

Query: 361 VLKCVGCGMTNLSKKH 377
           +LKCVG  + N S KH
Sbjct: 361 LLKCVGFDLKNFSMKH 376

[Close]

BLAST of Sed0017179.1 vs. ExPASy TrEMBL
Match: A0A1S3BNY4 (probable RNA 3'-terminal phosphate cyclase-like protein OS=Cucumis melo OX=3656 GN=LOC103491940 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 2.2e-168
Identity = 300/376 (79.79%), Postives = 331/376 (88.03%), Query Frame = 0


Query: 1   MLKTKYKRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDD 60
           M KTKYK L+GSQ+LRQ+L+LATLSRTPV I+DIR +   PGLRP+E S L LL+K+CDD
Sbjct: 1   MGKTKYKELRGSQILRQKLVLATLSRTPVRIDDIRPNTISPGLRPYEKSLLDLLEKICDD 60

Query: 61  CFIEINETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGI 120
           CFI+INETGT LKYKPGIVMGGR+L HDCG++R+IGYFL+PLILLALFGRKPLSIKLKGI
Sbjct: 61  CFIDINETGTSLKYKPGIVMGGRNLEHDCGLTRSIGYFLEPLILLALFGRKPLSIKLKGI 120

Query: 121 TNDSKDPSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAV 180
           TNDSKDPSVDTF+STT  MLK FGV+   V LKIESRGVPP GGGEV LTIPTVKS SAV
Sbjct: 121 TNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIESRGVPPLGGGEVILTIPTVKSFSAV 180

Query: 181 SWTDEGMVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPG 240
           SWTDEGMVK IRGVSFSTRVSSQFEHAMITAARGVFNRLLPDV+I TDHRKGP+AGNSPG
Sbjct: 181 SWTDEGMVKRIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVHIGTDHRKGPRAGNSPG 240

Query: 241 FGISLVAETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQG 300
           FGISLVAETT  C IS DT VSYG+ EE TEFEEEK+ELP PED+GE MA ALL +I +G
Sbjct: 241 FGISLVAETTTNCLISIDTAVSYGYGEEITEFEEEKQELPNPEDVGEGMAYALLNDIGKG 300

Query: 301 GVVDSTHQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTV 360
           GVVDSTHQGLLFLLCALCP DVSK+RVG++TPYGIETLRNI DFLKVMF+I PDPS+ TV
Sbjct: 301 GVVDSTHQGLLFLLCALCPNDVSKVRVGEITPYGIETLRNIYDFLKVMFHIEPDPSSQTV 360

Query: 361 VLKCVGCGMTNLSKKH 377
           +LKCVG  + N S KH
Sbjct: 361 LLKCVGFDLKNFSMKH 376

[Close]

BLAST of Sed0017179.1 vs. TAIR 10
Match: AT5G22100.1 (RNA cyclase family protein )

HSP 1 Score: 501.1 bits (1289), Expect = 7.6e-142
Identity = 243/371 (65.50%), Postives = 299/371 (80.59%), Query Frame = 0


Query: 7   KRLKGSQMLRQRLLLATLSRTPVLIEDIRTDQTWPGLRPHEVSFLRLLDKLCDDCFIEIN 66
           K++KGSQ  RQRLLL+TLS TP+ I++IR D+T PGLRPHEV+ LRLL+ + DD  ++IN
Sbjct: 5   KKMKGSQSFRQRLLLSTLSSTPISIDEIRADETIPGLRPHEVNLLRLLEIVTDDAVVDIN 64

Query: 67  ETGTKLKYKPGIVMGGRHLVHDCGVSRAIGYFLDPLILLALFGRKPLSIKLKGITNDSKD 126
           ETGT+LKYKPG ++GG++LVH C +SR+IGY+L+PL+LL LFG+KPLSI+LKGITND +D
Sbjct: 65  ETGTRLKYKPGTIVGGKNLVHSCSLSRSIGYYLEPLLLLGLFGKKPLSIRLKGITNDPRD 124

Query: 127 PSVDTFKSTTFTMLKHFGVDEKQVVLKIESRGVPPHGGGEVTLTIPTVKSLSAVSWTDEG 186
            SVDTF+STT  ++K FGV  + + LKIE+RGV P+GGGEV LT+P +K+LSAV W +EG
Sbjct: 125 ASVDTFRSTTLNIIKRFGVPAEDLELKIEARGVAPNGGGEVLLTVPNIKTLSAVHWVEEG 184

Query: 187 MVKSIRGVSFSTRVSSQFEHAMITAARGVFNRLLPDVYISTDHRKGPQAGNSPGFGISLV 246
           MVK IRG +FSTRV+S FEH+M  AARG+FN LLPDV+I  DHR G QAG SPG+GISL 
Sbjct: 185 MVKKIRGTTFSTRVTSDFEHSMRFAARGIFNNLLPDVHIFQDHRAGAQAGKSPGYGISLA 244

Query: 247 AETTEGCFISADTTVSYGHAEESTEFEEEKKELPPPEDIGEQMASALLGEISQGGVVDST 306
           AETT GCFISADTTVS    +E+ E + EKKE  P ED G ++AS LL EI +GGVVDST
Sbjct: 245 AETTTGCFISADTTVSCERPDETGELDVEKKERSPAEDTGVEVASWLLQEIEKGGVVDST 304

Query: 307 HQGLLFLLCALCPADVSKIRVGKLTPYGIETLRNIEDFLKVMFNIVPDPSNGTVVLKCVG 366
           HQGLLFLLCAL   DVSK+RVG L+PY +ETLRNI++FL V F I PDP  GTV+LKC G
Sbjct: 305 HQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIKEFLGVKFAIKPDPLTGTVILKCTG 364

Query: 367 CGMTNLSKKHS 378
            G+ NLS+K S
Sbjct: 365 SGLINLSRKLS 375

The following BLAST results are available for this feature:

BLAST of Sed0017179.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002386.1	4.1e-198	91.78	probable RNA 3'-terminal phosphate cyclase-like protein [Cucurbita maxima]	[more]
XP_023537462.1	9.2e-198	91.51	probable RNA 3'-terminal phosphate cyclase-like protein [Cucurbita pepo subsp. p...	[more]
XP_022951428.1	9.2e-198	91.51	probable RNA 3'-terminal phosphate cyclase-like protein [Cucurbita moschata] >XP...	[more]
XP_022142004.1	7.5e-184	86.47	probable RNA 3'-terminal phosphate cyclase-like protein [Momordica charantia]	[more]
XP_038878466.1	1.8e-169	80.05	probable RNA 3'-terminal phosphate cyclase-like protein [Benincasa hispida]	[more]

BLAST of Sed0017179.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C578	1.1e-140	65.50	Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana ...	[more]
Q54S38	5.8e-94	44.96	Probable RNA 3'-terminal phosphate cyclase-like protein OS=Dictyostelium discoid...	[more]
Q9JJT0	5.6e-89	47.84	RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus OX=10090 GN=Rcl1 ...	[more]
Q9Y2P8	7.3e-89	47.57	RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens OX=9606 GN=RCL1 P...	[more]
Q2KHX8	1.4e-87	47.03	RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus OX=9913 GN=RCL1 PE=...	[more]

BLAST of Sed0017179.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KL59	2.0e-198	91.78	probable RNA 3'-terminal phosphate cyclase-like protein OS=Cucurbita maxima OX=3...	[more]
A0A6J1GHN7	4.4e-198	91.51	probable RNA 3'-terminal phosphate cyclase-like protein OS=Cucurbita moschata OX...	[more]
A0A6J1CKC1	3.7e-184	86.47	probable RNA 3'-terminal phosphate cyclase-like protein OS=Momordica charantia O...	[more]
A0A5D3C7I3	2.2e-168	79.79	Putative RNA 3'-terminal phosphate cyclase-like protein OS=Cucumis melo var. mak...	[more]
A0A1S3BNY4	2.2e-168	79.79	probable RNA 3'-terminal phosphate cyclase-like protein OS=Cucumis melo OX=3656 ...	[more]

BLAST of Sed0017179.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22100.1	7.6e-142	65.50	RNA cyclase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016443	RNA 3'-terminal phosphate cyclase type 2	TIGRFAM	TIGR03400	TIGR03400	coord: 8..376 e-value: 2.1E-142 score: 472.2
IPR016443	RNA 3'-terminal phosphate cyclase type 2	PANTHER	PTHR11096:SF1	RNA 3'-TERMINAL PHOSPHATE CYCLASE-LIKE PROTEIN	coord: 1..376
IPR016443	RNA 3'-terminal phosphate cyclase type 2	CDD	cd00875	RNA_Cyclase_Class_I	coord: 5..351 e-value: 1.32731E-161 score: 454.848
IPR037136	RNA 3'-terminal phosphate cyclase domain superfamily	GENE3D	3.65.10.20		coord: 10..353 e-value: 4.1E-127 score: 425.6
IPR013791	RNA 3'-terminal phosphate cyclase, insert domain	PFAM	PF05189	RTC_insert	coord: 183..298 e-value: 1.5E-34 score: 118.6
IPR036553	RNA 3'-terminal phosphate cyclase, insert domain superfamily	GENE3D	3.30.360.20		coord: 184..294 e-value: 4.1E-127 score: 425.6
IPR023797	RNA 3'-terminal phosphate cyclase domain	PFAM	PF01137	RTC	coord: 9..351 e-value: 8.2E-55 score: 185.6
IPR000228	RNA 3'-terminal phosphate cyclase	PANTHER	PTHR11096	RNA 3' TERMINAL PHOSPHATE CYCLASE	coord: 1..376
IPR020719	RNA 3'-terminal phosphate cyclase-like, conserved site	PROSITE	PS01287	RTC	coord: 157..167
IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	SUPERFAMILY	55205	EPT/RTPC-like	coord: 11..234

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0017179	Sed0017179	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0017179.1-exon	Sed0017179.1-exon-LG08:23339731..23340238	exon
Sed0017179.1-exon	Sed0017179.1-exon-LG08:23341251..23341464	exon
Sed0017179.1-exon	Sed0017179.1-exon-LG08:23341555..23341730	exon
Sed0017179.1-exon	Sed0017179.1-exon-LG08:23341859..23342037	exon
Sed0017179.1-exon	Sed0017179.1-exon-LG08:23344024..23344173	exon
Sed0017179.1-exon	Sed0017179.1-exon-LG08:23344259..23344485	exon
Sed0017179.1-exon	Sed0017179.1-exon-LG08:23344604..23344723	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0017179.1-three_prime_utr	Sed0017179.1-three_prime_utr-LG08:23339731..23340028	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0017179.1-cds	Sed0017179.1-cds-LG08:23340029..23340238	CDS
Sed0017179.1-cds	Sed0017179.1-cds-LG08:23341251..23341464	CDS
Sed0017179.1-cds	Sed0017179.1-cds-LG08:23341555..23341730	CDS
Sed0017179.1-cds	Sed0017179.1-cds-LG08:23341859..23342037	CDS
Sed0017179.1-cds	Sed0017179.1-cds-LG08:23344024..23344173	CDS
Sed0017179.1-cds	Sed0017179.1-cds-LG08:23344259..23344463	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0017179.1-five_prime_utr	Sed0017179.1-five_prime_utr-LG08:23344464..23344485	five_prime_UTR
Sed0017179.1-five_prime_utr	Sed0017179.1-five_prime_utr-LG08:23344604..23344723	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0017179.1	Sed0017179.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006396	RNA processing
biological_process	GO:0000479	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004521	endoribonuclease activity