Sed0016035.1 (mRNA) Chayote v1

Overview


Name	Sed0016035.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF039-like
Location	LG09: 5829747 .. 5830530 (-)
Sequence length	784
RNA-Seq Expression	Sed0016035.1
Synteny	Sed0016035.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTAGAAAAAATTAAAAAATAAAAGCATAAAAGACCAAACACAACTAACACTCTTCTCTCAAAGTCTCCAATTTACAATGCATACACAACTCATCACTCTTTCTCTCTCCCCCTAAACCAACAAACAAATCTCCCCCTTCATTTCTACAATGACTACAAACTCTCACCATTCTCCACCCACAACCACCACCACCGCCACCGCCACCACTTCCTCGGCCTCTTCCGGCGAAAATAGCCGAAAGAGGCCGAGGAGTACGACGACGAGCACGACAACGAGCAATACAGAGAGCGAGAGCGAATCAACTCACTCGACAACAAAGTACAGAGGGGTTCGCCTAAGGGCGTGGGGAAAATGGGTGTCAGAGATACGAGAGCCGAGGAAGAAATCGAGGATATGGCTCGGCACATACCCGACCGCAGAGATGGCAGCGCGTGCACACGACGTGGCTGCGCTTGCCATCAAAGGGCGCAACGCATTCCTCAATTTCCCCGAACTCAAGCACCAACTCCCCAGCCCCGTCTCCCTCTCCGCTAAGGATATCCAAGCGGCGGCGGCAGAGGCAGCCGCCGTGAAACCACCGATGGCGGAGGAGGACGAGGAATTGAGCCATTCGGAAACGACGTCGTTTTACGAGGAGACATGGTTTGATTTACCAGATCTTGTAATAGGAGGGAGTGATGGGAAGTTGTTGGGTTATGAATTGCCATGGCAATTTGGTGAAGACCAAGAACACTCATGGCAATGGGACTGTTATTCTCATAGTACTACTTTTCCTAGTTGA

mRNA sequence

AATTTAGAAAAAATTAAAAAATAAAAGCATAAAAGACCAAACACAACTAACACTCTTCTCTCAAAGTCTCCAATTTACAATGCATACACAACTCATCACTCTTTCTCTCTCCCCCTAAACCAACAAACAAATCTCCCCCTTCATTTCTACAATGACTACAAACTCTCACCATTCTCCACCCACAACCACCACCACCGCCACCGCCACCACTTCCTCGGCCTCTTCCGGCGAAAATAGCCGAAAGAGGCCGAGGAGTACGACGACGAGCACGACAACGAGCAATACAGAGAGCGAGAGCGAATCAACTCACTCGACAACAAAGTACAGAGGGGTTCGCCTAAGGGCGTGGGGAAAATGGGTGTCAGAGATACGAGAGCCGAGGAAGAAATCGAGGATATGGCTCGGCACATACCCGACCGCAGAGATGGCAGCGCGTGCACACGACGTGGCTGCGCTTGCCATCAAAGGGCGCAACGCATTCCTCAATTTCCCCGAACTCAAGCACCAACTCCCCAGCCCCGTCTCCCTCTCCGCTAAGGATATCCAAGCGGCGGCGGCAGAGGCAGCCGCCGTGAAACCACCGATGGCGGAGGAGGACGAGGAATTGAGCCATTCGGAAACGACGTCGTTTTACGAGGAGACATGGTTTGATTTACCAGATCTTGTAATAGGAGGGAGTGATGGGAAGTTGTTGGGTTATGAATTGCCATGGCAATTTGGTGAAGACCAAGAACACTCATGGCAATGGGACTGTTATTCTCATAGTACTACTTTTCCTAGTTGA

Coding sequence (CDS)

ATGACTACAAACTCTCACCATTCTCCACCCACAACCACCACCACCGCCACCGCCACCACTTCCTCGGCCTCTTCCGGCGAAAATAGCCGAAAGAGGCCGAGGAGTACGACGACGAGCACGACAACGAGCAATACAGAGAGCGAGAGCGAATCAACTCACTCGACAACAAAGTACAGAGGGGTTCGCCTAAGGGCGTGGGGAAAATGGGTGTCAGAGATACGAGAGCCGAGGAAGAAATCGAGGATATGGCTCGGCACATACCCGACCGCAGAGATGGCAGCGCGTGCACACGACGTGGCTGCGCTTGCCATCAAAGGGCGCAACGCATTCCTCAATTTCCCCGAACTCAAGCACCAACTCCCCAGCCCCGTCTCCCTCTCCGCTAAGGATATCCAAGCGGCGGCGGCAGAGGCAGCCGCCGTGAAACCACCGATGGCGGAGGAGGACGAGGAATTGAGCCATTCGGAAACGACGTCGTTTTACGAGGAGACATGGTTTGATTTACCAGATCTTGTAATAGGAGGGAGTGATGGGAAGTTGTTGGGTTATGAATTGCCATGGCAATTTGGTGAAGACCAAGAACACTCATGGCAATGGGACTGTTATTCTCATAGTACTACTTTTCCTAGTTGA

Protein sequence

MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQLPSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKLLGYELPWQFGEDQEHSWQWDCYSHSTTFPS

Homology

[Close]

BLAST of Sed0016035.1 vs. NCBI nr
Match: KAG7025350.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.8 bits (730), Expect = 3.0e-73
Identity = 157/206 (76.21%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           M TNSHHS P  TTT++A++S++SSGENSRKRPR T   TTTSN ESESES+HST KYRG
Sbjct: 1   MNTNSHHSQP--TTTSSASSSASSSGENSRKRPRGT---TTTSNIESESESSHSTRKYRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VR RAWGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFPELKHQL
Sbjct: 61  VRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AA +KPPMAEE+EE          EETWFDLPDLV+GGSDG L
Sbjct: 121 PRPASLSAKDIQAAAADAATLKPPMAEEEEEEEEE------EETWFDLPDLVVGGSDGLL 180

Query: 181 L-GYELPWQFGEDQEHSWQWDCYSHS 206
           L GY+ PWQFG DQ++SW WD YSH+
Sbjct: 181 LAGYDSPWQFGGDQQNSWHWDSYSHT 195

[Close]

BLAST of Sed0016035.1 vs. NCBI nr
Match: XP_022959732.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita moschata])

HSP 1 Score: 282.3 bits (721), Expect = 3.3e-72
Identity = 155/206 (75.24%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           M TNSHHS P  TTT++A++S++SSGEN RKRPR     TT SN ESESES+HST KYRG
Sbjct: 1   MNTNSHHSQP--TTTSSASSSASSSGENGRKRPR----GTTMSNIESESESSHSTRKYRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VR RAWGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFPELKHQL
Sbjct: 61  VRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AA +KPPMAEE+EE          EETWFDLPDLV+GGSDG L
Sbjct: 121 PRPASLSAKDIQAAAADAATLKPPMAEEEEE---------EEETWFDLPDLVVGGSDGLL 180

Query: 181 L-GYELPWQFGEDQEHSWQWDCYSHS 206
           L GY+ PWQFG DQ+HSW WD YSH+
Sbjct: 181 LAGYDSPWQFGGDQQHSWHWDSYSHT 191

[Close]

BLAST of Sed0016035.1 vs. NCBI nr
Match: XP_023515152.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 9.7e-72
Identity = 156/210 (74.29%), Postives = 170/210 (80.95%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           M TNSHHS P  TTT++A++S++SSGEN RKRPR T   TTTSN ESESES+HST KYRG
Sbjct: 1   MNTNSHHSQP--TTTSSASSSASSSGENRRKRPRGT---TTTSNIESESESSHSTRKYRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VR RAWGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFPELKHQL
Sbjct: 61  VRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AA +KPPMAEE+EE          EETWFDLPDLV+GGSDG L
Sbjct: 121 PRPASLSAKDIQAAAADAATLKPPMAEEEEEEEE-------EETWFDLPDLVVGGSDGLL 180

Query: 181 LG-YELPWQFGEDQEHSWQWDCYSHSTTFP 210
           L  Y+ PWQFG DQ+ SW WD YSH+   P
Sbjct: 181 LARYDSPWQFGGDQQTSWHWDSYSHTILPP 198

[Close]

BLAST of Sed0016035.1 vs. NCBI nr
Match: XP_023004375.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 154/210 (73.33%), Postives = 170/210 (80.95%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           M TNSHHS PTTT++A+++TS  SSG+NS+KRPR T    TTSN ESESES+H T KYRG
Sbjct: 1   MNTNSHHSQPTTTSSASSSTS--SSGDNSQKRPRGT---MTTSNIESESESSHLTRKYRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VR RAWGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFPELKHQL
Sbjct: 61  VRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AA +KPPM EE+EE          EETWFDLPDLV+GGSDG L
Sbjct: 121 PRPASLSAKDIQAAAADAATLKPPMEEEEEE---------EEETWFDLPDLVVGGSDGLL 180

Query: 181 L-GYELPWQFGEDQEHSWQWDCYSHSTTFP 210
           L GY+ PWQFG DQ++SW WD YSH+   P
Sbjct: 181 LAGYDSPWQFGGDQQNSWHWDSYSHTILPP 196

[Close]

BLAST of Sed0016035.1 vs. NCBI nr
Match: KAG6592942.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.9 bits (546), Expect = 6.5e-52
Identity = 122/151 (80.79%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           M TNSHHS P  TTT++A++S++SSGEN RKRPR T   TTTSN ESESES+HST KYRG
Sbjct: 1   MNTNSHHSQP--TTTSSASSSASSSGENGRKRPRGT---TTTSNIESESESSHSTRKYRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VR RAWGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFPELKHQL
Sbjct: 61  VRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEE 152
           P P SLSAKDIQAAAA+AA +KPPMAEE+EE
Sbjct: 121 PRPASLSAKDIQAAAADAATLKPPMAEEEEE 146

[Close]

BLAST of Sed0016035.1 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32
Identity = 98/194 (50.52%), Postives = 118/194 (60.82%), Query Frame = 0


Query: 12  TTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRGVRLRAWGKWVS 71
           T ++++  TSS+ S   S++       S       + S+   + T YRGVR+R+WGKWVS
Sbjct: 25  TISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVS 84

Query: 72  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQLPSPVSLSAKDI 131
           EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG + FLNFPEL   LP PVS S KDI
Sbjct: 85  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDI 144

Query: 132 QAAAAEAAAV----KPPMAEE-DEELSHSE---------TTSFY---------------- 176
           QAAA +AA      KP + ++  +ELSHSE         ++SF                 
Sbjct: 145 QAAATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESN 204

[Close]

BLAST of Sed0016035.1 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-31
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 39  STTTSNTESESESTHSTTKYRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD 98
           S T  +++ + E T     YRG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHD
Sbjct: 7   SDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHD 66

Query: 99  VAALAIKGRNAFLNFPELKHQLPSPVSLSAKDIQAAAAEAA 140
           VAAL+IKG +A LNFPEL   LP PVSLS +DIQAAAAEAA
Sbjct: 67  VAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAA 107

[Close]

BLAST of Sed0016035.1 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30
Identity = 69/117 (58.97%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 43  SNTESESESTHSTTKYRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAL 102
           S+++ E +  +    YRGVR+R+WGKWVSEIREPRKKSRIWLGT+PTAEMA RAHDVAA+
Sbjct: 4   SSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAM 63

Query: 103 AIKGRNAFLNFPELKHQLPSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTS 160
           +IKG +A LNFPEL   LP PVSLS +D++AAA +AA +         +   SETT+
Sbjct: 64  SIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTT 120

[Close]

BLAST of Sed0016035.1 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.3e-30
Identity = 82/156 (52.56%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 24  SSGENSRKRPRSTTTSTT--TSNTESESESTHSTTKYRGVRLRAWGKWVSEIREPRKKSR 83
           SS   S++  RS     T  +S T++E +       +RGVR+R WGKWVSEIREPRKKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 84  IWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQLPSPVSLSAKDIQAAAAEAAAV 143
           IWLGT+ T EMAARAHDVAALAIKG +A LNFPEL + LP P S   KDIQ AAA AAAV
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 144 KPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSD 178
                E       S   +  ++ + DLPDL++  +D
Sbjct: 124 DWKAPESPSSTVTSSPVA--DDAFSDLPDLLLDVND 157

[Close]

BLAST of Sed0016035.1 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-28
Identity = 83/167 (49.70%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 8   SPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTK---------- 67
           S PTT+++++++T+S    E++ KR  S  + ++  + E + +      K          
Sbjct: 38  SSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKH 97

Query: 68  --YRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPE 127
             YRGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A+LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 128 LKHQLPSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYE 163
           L  +LP PV+ S KDIQAAA+ AA       +   ++S+SE     E
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAAV---NWQDSVNDVSNSEVAEIVE 201

[Close]

BLAST of Sed0016035.1 vs. ExPASy TrEMBL
Match: A0A6J1H5C9 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111460715 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 155/206 (75.24%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           M TNSHHS P  TTT++A++S++SSGEN RKRPR     TT SN ESESES+HST KYRG
Sbjct: 1   MNTNSHHSQP--TTTSSASSSASSSGENGRKRPR----GTTMSNIESESESSHSTRKYRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VR RAWGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFPELKHQL
Sbjct: 61  VRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AA +KPPMAEE+EE          EETWFDLPDLV+GGSDG L
Sbjct: 121 PRPASLSAKDIQAAAADAATLKPPMAEEEEE---------EEETWFDLPDLVVGGSDGLL 180

Query: 181 L-GYELPWQFGEDQEHSWQWDCYSHS 206
           L GY+ PWQFG DQ+HSW WD YSH+
Sbjct: 181 LAGYDSPWQFGGDQQHSWHWDSYSHT 191

[Close]

BLAST of Sed0016035.1 vs. ExPASy TrEMBL
Match: A0A6J1KUE1 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111497717 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.2e-71
Identity = 154/210 (73.33%), Postives = 170/210 (80.95%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           M TNSHHS PTTT++A+++TS  SSG+NS+KRPR T    TTSN ESESES+H T KYRG
Sbjct: 1   MNTNSHHSQPTTTSSASSSTS--SSGDNSQKRPRGT---MTTSNIESESESSHLTRKYRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VR RAWGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFPELKHQL
Sbjct: 61  VRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AA +KPPM EE+EE          EETWFDLPDLV+GGSDG L
Sbjct: 121 PRPASLSAKDIQAAAADAATLKPPMEEEEEE---------EEETWFDLPDLVVGGSDGLL 180

Query: 181 L-GYELPWQFGEDQEHSWQWDCYSHSTTFP 210
           L GY+ PWQFG DQ++SW WD YSH+   P
Sbjct: 181 LAGYDSPWQFGGDQQNSWHWDSYSHTILPP 196

[Close]

BLAST of Sed0016035.1 vs. ExPASy TrEMBL
Match: A0A5A7TVV7 (Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73575G00010 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 129/224 (57.59%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           MTTNSHHS    TT+++ATT        SRKR RS+T+S     TESES+   ST K+RG
Sbjct: 1   MTTNSHHS----TTSSSATT--------SRKRQRSSTSSA----TESESDQEISTPKFRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VRLR WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  AFLNFP+LKHQL
Sbjct: 61  VRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AAA+K      + E + S      E TWFDLPDL++  S+G L
Sbjct: 121 PRPASLSAKDIQAAAAQAAALK-----HEPETATSCRGEEEESTWFDLPDLIV--SNGFL 180

Query: 181 LGYE-------------LPWQF--GEDQEHSWQWDCYSHSTTFP 210
           LG +               WQF   + +++ +QW      T FP
Sbjct: 181 LGLDENYSSSCSSSSSSTSWQFLVDDHEDNHFQWHSDFSHTIFP 201

[Close]

BLAST of Sed0016035.1 vs. ExPASy TrEMBL
Match: A0A1S3CBH6 (ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=LOC103499073 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 129/224 (57.59%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           MTTNSHHS    TT+++ATT        SRKR RS+T+S     TESES+   ST K+RG
Sbjct: 1   MTTNSHHS----TTSSSATT--------SRKRQRSSTSSA----TESESDQEISTPKFRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VRLR WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  AFLNFP+LKHQL
Sbjct: 61  VRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSDGKL 180
           P P SLSAKDIQAAAA+AAA+K      + E + S      E TWFDLPDL++  S+G L
Sbjct: 121 PRPASLSAKDIQAAAAQAAALK-----HEPETATSCRGEEEESTWFDLPDLIV--SNGFL 180

Query: 181 LGYE-------------LPWQF--GEDQEHSWQWDCYSHSTTFP 210
           LG +               WQF   + +++ +QW      T FP
Sbjct: 181 LGLDENYSSSCSSSSSSTSWQFLVDDHEDNHFQWHSDFSHTIFP 201

[Close]

BLAST of Sed0016035.1 vs. ExPASy TrEMBL
Match: A0A0A0KAN0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 130/229 (56.77%), Postives = 154/229 (67.25%), Query Frame = 0


Query: 1   MTTNSHHSPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRG 60
           MTTNSHHS  TT+++A +  ++      SRKR RS+T+S     TESES+   ST K+RG
Sbjct: 1   MTTNSHHS--TTSSSAVSCLTA-----TSRKRQRSSTSSA----TESESDQESSTPKFRG 60

Query: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQL 120
           VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  AFLNFP+LKHQL
Sbjct: 61  VRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQL 120

Query: 121 PSPVSLSAKDIQAAAAEAAAVK----PPMAEEDEELSHSETTSFYEETWFDLPDLVIGGS 180
           P P SLSAKDIQAAAA+AAA+K     P +  +E L   E     E TWFDLPDL++  S
Sbjct: 121 PRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEE----ESTWFDLPDLIV--S 180

Query: 181 DGKLLGYE--------------LPWQF--GEDQEHSWQWDCYSHSTTFP 210
           +G LLG +                WQF   + +++ +QW      T FP
Sbjct: 181 NGFLLGLDENYSSSCSSSSSSSSSWQFLVDDHEDNHFQWHSDFSHTIFP 212

[Close]

BLAST of Sed0016035.1 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33
Identity = 98/194 (50.52%), Postives = 118/194 (60.82%), Query Frame = 0


Query: 12  TTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTKYRGVRLRAWGKWVS 71
           T ++++  TSS+ S   S++       S       + S+   + T YRGVR+R+WGKWVS
Sbjct: 25  TISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVS 84

Query: 72  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQLPSPVSLSAKDI 131
           EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG + FLNFPEL   LP PVS S KDI
Sbjct: 85  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDI 144

Query: 132 QAAAAEAAAV----KPPMAEE-DEELSHSE---------TTSFY---------------- 176
           QAAA +AA      KP + ++  +ELSHSE         ++SF                 
Sbjct: 145 QAAATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESN 204

[Close]

BLAST of Sed0016035.1 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-32
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 39  STTTSNTESESESTHSTTKYRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHD 98
           S T  +++ + E T     YRG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHD
Sbjct: 7   SDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHD 66

Query: 99  VAALAIKGRNAFLNFPELKHQLPSPVSLSAKDIQAAAAEAA 140
           VAAL+IKG +A LNFPEL   LP PVSLS +DIQAAAAEAA
Sbjct: 67  VAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAA 107

[Close]

BLAST of Sed0016035.1 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31
Identity = 69/117 (58.97%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 43  SNTESESESTHSTTKYRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAL 102
           S+++ E +  +    YRGVR+R+WGKWVSEIREPRKKSRIWLGT+PTAEMA RAHDVAA+
Sbjct: 4   SSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAM 63

Query: 103 AIKGRNAFLNFPELKHQLPSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTS 160
           +IKG +A LNFPEL   LP PVSLS +D++AAA +AA +         +   SETT+
Sbjct: 64  SIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTT 120

[Close]

BLAST of Sed0016035.1 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-31
Identity = 82/156 (52.56%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 24  SSGENSRKRPRSTTTSTT--TSNTESESESTHSTTKYRGVRLRAWGKWVSEIREPRKKSR 83
           SS   S++  RS     T  +S T++E +       +RGVR+R WGKWVSEIREPRKKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 84  IWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPELKHQLPSPVSLSAKDIQAAAAEAAAV 143
           IWLGT+ T EMAARAHDVAALAIKG +A LNFPEL + LP P S   KDIQ AAA AAAV
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 144 KPPMAEEDEELSHSETTSFYEETWFDLPDLVIGGSD 178
                E       S   +  ++ + DLPDL++  +D
Sbjct: 124 DWKAPESPSSTVTSSPVA--DDAFSDLPDLLLDVND 157

[Close]

BLAST of Sed0016035.1 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-29
Identity = 83/167 (49.70%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 8   SPPTTTTTATATTSSASSGENSRKRPRSTTTSTTTSNTESESESTHSTTK---------- 67
           S PTT+++++++T+S    E++ KR  S  + ++  + E + +      K          
Sbjct: 38  SSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKH 97

Query: 68  --YRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRNAFLNFPE 127
             YRGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A+LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 128 LKHQLPSPVSLSAKDIQAAAAEAAAVKPPMAEEDEELSHSETTSFYE 163
           L  +LP PV+ S KDIQAAA+ AA       +   ++S+SE     E
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAAV---NWQDSVNDVSNSEVAEIVE 201

The following BLAST results are available for this feature:

BLAST of Sed0016035.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025350.1	3.0e-73	76.21	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022959732.1	3.3e-72	75.24	ethylene-responsive transcription factor ERF039-like [Cucurbita moschata]	[more]
XP_023515152.1	9.7e-72	74.29	ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo...	[more]
XP_023004375.1	1.1e-70	73.33	ethylene-responsive transcription factor ERF039-like [Cucurbita maxima]	[more]
KAG6592942.1	6.5e-52	80.79	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Sed0016035.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M210	1.6e-32	50.52	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	2.3e-31	71.29	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	3.3e-30	58.97	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SUK8	4.3e-30	52.56	Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LBQ7	4.0e-28	49.70	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0016035.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5C9	1.6e-72	75.24	ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KUE1	5.2e-71	73.33	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]
A0A5A7TVV7	1.4e-47	57.59	Ethylene-responsive transcription factor ERF039-like protein OS=Cucumis melo var...	[more]
A0A1S3CBH6	1.4e-47	57.59	ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KAN0	1.2e-46	56.77	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=...	[more]

BLAST of Sed0016035.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60490.1	1.1e-33	50.52	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	1.6e-32	71.29	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	2.3e-31	58.97	Integrase-type DNA-binding superfamily protein	[more]
AT4G16750.1	3.0e-31	52.56	Integrase-type DNA-binding superfamily protein	[more]
AT2G44940.1	2.8e-29	49.70	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 80..96 score: 66.1 coord: 58..69 score: 69.24
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 57..120 e-value: 7.0E-37 score: 138.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 56..106 e-value: 1.8E-14 score: 53.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 57..114 score: 23.735794
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 56..116 e-value: 2.10266E-33 score: 112.365
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 56..115 e-value: 3.5E-25 score: 89.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 11..176
None	No IPR available	PANTHER	PTHR31985:SF130	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043	coord: 11..176
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 57..114

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0016035	Sed0016035	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016035.1-cds	Sed0016035.1-cds-LG09:5829747..5830379	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016035.1-exon	Sed0016035.1-exon-LG09:5829747..5830530	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016035.1-five_prime_utr	Sed0016035.1-five_prime_utr-LG09:5830380..5830530	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0016035.1	Sed0016035.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity