Sed0014765.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGAAACAGTATCAGAGGAAGTTCTGAGAAAAGGGCCATGGAAATTGGAGGAAGATGAAGTTTTGTTGAACCATGTTCGGCGATTCGGCCCCCGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCGCCGGACCGGCAAGTCCTGCCGTCTTCGTTGGGTCAATAAACTCAGACCCAACTTGAAGAAGTAACCCCATTTCTCTCTGTTCATCATTTGAAGATGTTTTATGTGAATTCAGGGTTTGTTGTTTAGGAGTTTGTTTGTGCATGTCAAGTGTTTGTGAAAATGTCTGAATCAGTATTTTTATTGATTTTGGTGGTGTAAGTTCTGTTATGGATTTGTCTTGGAATTTGAGTCTATGAATTTCGTTTGTTATGTATTTTCCATTTCTGGCAAATGGGTTGTTTTTGTTTTTGTTTGTTTCTTAATCTTACTGTTTTTTCTATGTTTGGGTTGTTTTTTTTGTTTTTGTTGTGAGTGAAAGTGCTTGTGAAAATGTATTTTGCTGCTGTATGTTTTGTTATAGATTTGTGTTAGAATATGAGTTTATGATTTTCGTTTTTTACTTTGTTGCCCATCTCCAATAAATGTGTTGTTTTTGTTGTTTCTTAAATCCTTCTGTTTTTTGCTGTTGTGATTGCTAAGGCTCCGTTTGATAACCATTGTGTTTTTCGGTTTTGAAATTTAAGCCTATAACAATTACCTTACCATGGTTTTTTTTTTTTATTTGGATATCTACATCTTACCTATATTTTAATAAACAAAACCAAAATTTGTAAACAAAGAAAAGTAGTTTCCAAAAGTTTGTTTTTGTTTTTGAAATATTCACCTACTTTCTTAGGAAAATGTGGATACATTGTAGGAAAGATGGAGCACATGGTAGTAAATTTGAGTAGAAATAAAGTTAAATTTCATAAACCAAAAACAAAAAATCAAATAGTTATCAAACGAGGCCTAAGTTGTTGTGAAAATGTCTGAAAGAGTAATTTCTTGACCATGGTGTTGCTTGCAAGTTCTACTCATGGCTTTTTATTCCTAGGAGATTTTGATTTGATTCTTTAGAATATGAGTTTATGTGTTTGGTTTTTCTGTGTTCTCCTATTTTCATCAAGTGGATGCAAGTTCACAGCAGAGGAGGAAAGGTTGGTGATAGAATTGCAGGCGCAGTTTGGGAATAAATGGGCGAAGATAGCGACTTACTTGCCCGGTCGGACCGATAACAATGTTAAGAATTTTTGGAGTAGCAGGCAGAAGAGACTGGCTAGGCTTTTGCATACCTCAACTGCTTCATCCAAATTGCACAAAAGAGTCACAAAGGAAAAGCCAGTAGATTTTGATGTTTCATTCATGGAGGTATTTTTCTTTGCAAAATATATAGCCTTTTGATGTTTTAGATCCATTAGTTCTAGTAGTTTTGAAGTTGGTTTTGTCTTGATGTGTAGTTATGATTGAGATACAAGAATGGTCCGAATCGAGATGCTTGACAGCGATTTCGAAAATCAAATTTGAATGCTGCCTTTTTGTGAAAAATGGATTTTGATGATTCAATGTTATTGTTTTGTTTATTTTTTAAACTGGAAAATCGGAGTTTCACTCCACTATACCTAAGGTAACCACGCCCAGCCCTAAGTCAGGCATTGGGAGATATCGAAGGAATAGAGACACGAGAGGTGTCTAAAAATTAATGTCACAAGTGAGTCTCAAACTTGAGACTTTGAAGAAAGCACACATTCAAAGTCCAAGCCTTCGGTCACTACTGCACCACTCCTTAGGGACTCAATGTTATTGTGTTTATTGGTTTGATCTTTACCAATTTGCTAACTTAGATCTTATGAGAAAGGACATTACGGATTTTCTTTTTGTTGAAGTTGCTTCAGATTATGGCAATTTGTTGAATCTTTATTAACTGTTTTTCTTCTATTCCTGAAGGCACCAAAACTGAGTTCTGCATCAGAGGGGGACTCGTCCTCGCAAACTATGTCGTGCTCGTCGTCTTTCTGCATTGCTGCCGAACCTCTTAGTATGTTCTGCTCATGGCCCGACATATACGGTCCCAAATTACATGGTTTTGGAAAAGACTTTCTTCAACCTGAATTCAACCCTTTTGAGACGATCAAATCCGAACCGCAAACCAGTTACCCTTCAACCGATTTCTACACTCAACCACTTGGTTCAACATTCTCATGTCAAGGGCTCCATGATCCCAGTTACTTTGTTGATTTTCTGGAGCCTTTGGATGTTTCTCAATTGGAAAACGAAGTTCAGTTTCCATTCGGGGGACAGTTTTTCGAACCGATGGAATGTTGTCCGAATCCGAATGTTGTGAGGGAGAAAGTTGACAACCCAGAAAGCTTCTTCAGTGAGTTCCCTGCAGACATATTTGATCATATCGAACCGCTGCCGAGCTCACCGGAGAACTGA ATGGAAGAAGAAACAGTATCAGAGGAAGTTCTGAGAAAAGGGCCATGGAAATTGGAGGAAGATGAAGTTTTGTTGAACCATGTTCGGCGATTCGGCCCCCGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCGCCGGACCGGCAAGTCCTGCCGTCTTCGTTGGGTCAATAAACTCAGACCCAACTTGAAGAATGGATGCAAGTTCACAGCAGAGGAGGAAAGGTTGGTGATAGAATTGCAGGCGCAGTTTGGGAATAAATGGGCGAAGATAGCGACTTACTTGCCCGGTCGGACCGATAACAATGTTAAGAATTTTTGGAGTAGCAGGCAGAAGAGACTGGCTAGGCTTTTGCATACCTCAACTGCTTCATCCAAATTGCACAAAAGAGTCACAAAGGAAAAGCCAGTAGATTTTGATGTTTCATTCATGGAGGCACCAAAACTGAGTTCTGCATCAGAGGGGGACTCGTCCTCGCAAACTATGTCGTGCTCGTCGTCTTTCTGCATTGCTGCCGAACCTCTTAGTATGTTCTGCTCATGGCCCGACATATACGGTCCCAAATTACATGGTTTTGGAAAAGACTTTCTTCAACCTGAATTCAACCCTTTTGAGACGATCAAATCCGAACCGCAAACCAGTTACCCTTCAACCGATTTCTACACTCAACCACTTGGTTCAACATTCTCATGTCAAGGGCTCCATGATCCCAGTTACTTTGTTGATTTTCTGGAGCCTTTGGATGTTTCTCAATTGGAAAACGAAGTTCAGTTTCCATTCGGGGGACAGTTTTTCGAACCGATGGAATGTTGTCCGAATCCGAATGTTGTGAGGGAGAAAGTTGACAACCCAGAAAGCTTCTTCAGTGAGTTCCCTGCAGACATATTTGATCATATCGAACCGCTGCCGAGCTCACCGGAGAACTGA ATGGAAGAAGAAACAGTATCAGAGGAAGTTCTGAGAAAAGGGCCATGGAAATTGGAGGAAGATGAAGTTTTGTTGAACCATGTTCGGCGATTCGGCCCCCGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCGCCGGACCGGCAAGTCCTGCCGTCTTCGTTGGGTCAATAAACTCAGACCCAACTTGAAGAATGGATGCAAGTTCACAGCAGAGGAGGAAAGGTTGGTGATAGAATTGCAGGCGCAGTTTGGGAATAAATGGGCGAAGATAGCGACTTACTTGCCCGGTCGGACCGATAACAATGTTAAGAATTTTTGGAGTAGCAGGCAGAAGAGACTGGCTAGGCTTTTGCATACCTCAACTGCTTCATCCAAATTGCACAAAAGAGTCACAAAGGAAAAGCCAGTAGATTTTGATGTTTCATTCATGGAGGCACCAAAACTGAGTTCTGCATCAGAGGGGGACTCGTCCTCGCAAACTATGTCGTGCTCGTCGTCTTTCTGCATTGCTGCCGAACCTCTTAGTATGTTCTGCTCATGGCCCGACATATACGGTCCCAAATTACATGGTTTTGGAAAAGACTTTCTTCAACCTGAATTCAACCCTTTTGAGACGATCAAATCCGAACCGCAAACCAGTTACCCTTCAACCGATTTCTACACTCAACCACTTGGTTCAACATTCTCATGTCAAGGGCTCCATGATCCCAGTTACTTTGTTGATTTTCTGGAGCCTTTGGATGTTTCTCAATTGGAAAACGAAGTTCAGTTTCCATTCGGGGGACAGTTTTTCGAACCGATGGAATGTTGTCCGAATCCGAATGTTGTGAGGGAGAAAGTTGACAACCCAGAAAGCTTCTTCAGTGAGTTCCCTGCAGACATATTTGATCATATCGAACCGCTGCCGAGCTCACCGGAGAACTGA MEEETVSEEVLRKGPWKLEEDEVLLNHVRRFGPRDWSSIRSKGLLRRTGKSCRLRWVNKLRPNLKNGCKFTAEEERLVIELQAQFGNKWAKIATYLPGRTDNNVKNFWSSRQKRLARLLHTSTASSKLHKRVTKEKPVDFDVSFMEAPKLSSASEGDSSSQTMSCSSSFCIAAEPLSMFCSWPDIYGPKLHGFGKDFLQPEFNPFETIKSEPQTSYPSTDFYTQPLGSTFSCQGLHDPSYFVDFLEPLDVSQLENEVQFPFGGQFFEPMECCPNPNVVREKVDNPESFFSEFPADIFDHIEPLPSSPEN Homology
BLAST of Sed0014765.1 vs. NCBI nr
Match: XP_038906713.1 (transcription factor DUO1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 498.8 bits (1283), Expect = 3.3e-137 Identity = 252/309 (81.55%), Postives = 271/309 (87.70%), Query Frame = 0
BLAST of Sed0014765.1 vs. NCBI nr
Match: XP_022153189.1 (transcription factor DUO1 [Momordica charantia]) HSP 1 Score: 473.0 bits (1216), Expect = 2.0e-129 Identity = 238/312 (76.28%), Postives = 260/312 (83.33%), Query Frame = 0
BLAST of Sed0014765.1 vs. NCBI nr
Match: XP_022933030.1 (transcription factor DUO1-like [Cucurbita moschata]) HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-126 Identity = 241/310 (77.74%), Postives = 264/310 (85.16%), Query Frame = 0
BLAST of Sed0014765.1 vs. NCBI nr
Match: XP_023520920.1 (transcription factor DUO1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-126 Identity = 240/310 (77.42%), Postives = 264/310 (85.16%), Query Frame = 0
BLAST of Sed0014765.1 vs. NCBI nr
Match: XP_022973896.1 (transcription factor DUO1-like [Cucurbita maxima]) HSP 1 Score: 461.1 bits (1185), Expect = 7.7e-126 Identity = 239/310 (77.10%), Postives = 263/310 (84.84%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy Swiss-Prot
Match: A0A178VEK7 (Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 4.8e-62 Identity = 147/317 (46.37%), Postives = 186/317 (58.68%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy Swiss-Prot
Match: Q0JB89 (Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB58 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.7e-51 Identity = 98/122 (80.33%), Postives = 107/122 (87.70%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy Swiss-Prot
Match: Q9S773 (Transcription factor MYB97 OS=Arabidopsis thaliana OX=3702 GN=MYB97 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32 Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy Swiss-Prot
Match: Q94FL7 (Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.0e-31 Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy Swiss-Prot
Match: A2WW87 (Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.2e-30 Identity = 59/107 (55.14%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy TrEMBL
Match: A0A6J1DIB8 (transcription factor DUO1 OS=Momordica charantia OX=3673 GN=LOC111020746 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 9.5e-130 Identity = 238/312 (76.28%), Postives = 260/312 (83.33%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy TrEMBL
Match: A0A6J1F3T0 (transcription factor DUO1-like OS=Cucurbita moschata OX=3662 GN=LOC111439723 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 7.5e-127 Identity = 241/310 (77.74%), Postives = 264/310 (85.16%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy TrEMBL
Match: A0A6J1I9W2 (transcription factor DUO1-like OS=Cucurbita maxima OX=3661 GN=LOC111472488 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.7e-126 Identity = 239/310 (77.10%), Postives = 263/310 (84.84%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy TrEMBL
Match: A0A5A7T9S7 (Myb-related protein 308-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002720 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 5.9e-124 Identity = 236/311 (75.88%), Postives = 260/311 (83.60%), Query Frame = 0
BLAST of Sed0014765.1 vs. ExPASy TrEMBL
Match: A0A1S3CB01 (myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 5.9e-124 Identity = 236/311 (75.88%), Postives = 260/311 (83.60%), Query Frame = 0
BLAST of Sed0014765.1 vs. TAIR 10
Match: AT3G60460.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 239.6 bits (610), Expect = 3.4e-63 Identity = 146/310 (47.10%), Postives = 184/310 (59.35%), Query Frame = 0
BLAST of Sed0014765.1 vs. TAIR 10
Match: AT4G26930.1 (myb domain protein 97 ) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-33 Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of Sed0014765.1 vs. TAIR 10
Match: AT5G55020.1 (myb domain protein 120 ) HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32 Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 0
BLAST of Sed0014765.1 vs. TAIR 10
Match: AT3G11440.1 (myb domain protein 65 ) HSP 1 Score: 132.1 bits (331), Expect = 7.6e-31 Identity = 57/108 (52.78%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of Sed0014765.1 vs. TAIR 10
Match: AT5G06100.1 (myb domain protein 33 ) HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30 Identity = 56/107 (52.34%), Postives = 81/107 (75.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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