Sed0010537.2 (mRNA) Chayote v1

Overview


Name	Sed0010537.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	U3 small nucleolar RNA-associated protein 14 homolog A
Location	LG09: 7559456 .. 7563574 (+)
Sequence length	1148
RNA-Seq Expression	Sed0010537.2
Synteny	Sed0010537.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTACTCATTTTGTGTTTTTTTTTCTCTCTCTTTCTTCAGATCTTCAACTGGGTTCACAAGACTTTTCAACATAGCCTTCTCAAGGGTTTCTCTCTTCAACTTCTCTATGAAAAAAAAAAACATTTACTATATTCTATGTTTTCATGTATACAATATTTCTATTTTTTTTCTTTAAGAGTTTAGCAATTGCACGAATATGAGTTCCAAGTTCCAACGTTTAGGATGGTAATAATGATTTATGCTTTTTTTTTTTTTTAATTTAACACTAATGGCTGAATATAAGATAATATGGAGTTATGCCTAAAAACCAATTGATACTGAATAGAATAATTCATATATTTTATAAAGATATTGAAAATTCCTAATTTTTTTTATATGTACGATAAGGTGAGTATCTCCAACCGAAAGAAAATTTAAATTCATAATATTTTGATTACTAGATCATAAAAGATGTTATTAGAGCCTATGCTCATACAAGGGTCATTAGAGCATGGGCTCCATTTACTATATATATATATTAGATTATGCTATTTTCATTTTTAGAAGTTTAAGAATGAAAAAATAGAGAAAACCAAAGAGATTTTAGATCTCTTTTAAAAGGTGATAAGCCTAAAATTAAGAAGTGAGTTTAATTATAAAATATTTTGTTATCCTTAAGATCTAAACTTTGAAACAAGTATGAGTGCGTCAAAATATATCGTAGGCCAACTATTAAGTTAAATGGTTGTCTATAAATGAGAGCTCCAATTTTTCGAAAACAAATAGAGAAATTCTAGCTTTTGTTACTGATCCTACATTTGACTATCAAGAGTTGCTATTTGTTTTTCAGAGGGTTTTGCTCAAAATGGGACAAAGAAGAGTGAAACTGCATCCATTAATGAAGTGGACAGGCATGCATTGCTAAAACAAGTAGACCTAGATGTGGAAGCCCTTCATGGCTGGAGAGATGGCATTCTCACCATAGGCACATTCGGGTTCGAATCAATGAAACCATCGAACGAGCCAAAGGATTATCTCATGCTCGAAAGCGAAGAAGACGACGAAGACTATGAAGAAGAGGAAGACAAATCATTCATTCACGAGGAAGACAACGACATTATCAACTACCTGGAAAACGAAGAGCTCAACCCGTTGATGTTCACAGCATTCGGACACAAAACAAAGGAAATAAGTGATGCGAAAAGTGGACGTGATGATTTGATGATGGGAGGTTATGAGATGAAGATCGAATCGAAATATAGCGCGATCGTGGAGACGGAGGCGGACGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATAACACTGGCAGACTTGTTCTTGGCTGAAGCTGGGGCTGTGGGAAGAAGAGAAGTGCTTGAGGATCAAAAAGGGATTCAAAAGAAAACTGGTGATGTGAGAAGTAAGAGCAGTCTCTCCTTTGCCAAGAAGCTGATTCCTCGAGTCAAGGAAGATTCACACCCAATTAAGAACTTTCAACGGGTGAGTAATCTTTTTTATGGCTCTGATACCATGTTGAATCATTTAATTACACAATATATAATTAATTGAAATCAATTTTAACTACAGAACTGGATATAAGGGAGGATAGGAGCACCTTGGCCTCTCAAAATTTTAGAATTGGTCATTTCTTTTGTAGGTAGAAATAGACCCGTATATATTTTTATAGTATTTATTACAAATAAATAAGATGGTTGGTGGTATTAGAGAGTATGAGGTTCCACTTCAAAACCAATTGACAATGAAGGGACCCTACTTTTCTAATGTGGGGGAATATAAGGTTTCAACTCAAAACTAAATAATAATGAAGGGAATAATTCATATCTCTTATAAATGTTTGTAGTACTTCTCATTTTTCAAAGTGGGATAATTGTTAAATCCTAAGGTGATCCCTTCCAATTTTAAAATTTTTTGTTATTTTTTAGGTATAAAAGTAGATTCCAACTGTTGGCCCCACGAAATAGTGGAATTTGTGATTTCTTTAACATGTATAAGTAAACTTTTTTAAATAATTTAAATAATGGCTCTTCCAAATTAATTTTTGTAAGTCTTCTCTAGGATGTGGGCTTGATAGGTTCTTAAAATAGTTGTTGGAATGAGCTTTGGATAAGTTTTAAGACTAGTATTATTTATGATGATCATTGAAACATCTTTTCACTATGTTGTAGAAAATTTATGGTCAAGGTTTCAAATGTTACTTTTTACCACTTCAAAAGTCAATTCTAGCTAGCTTGAAAAAGATATTATTTTAGTACTTATAAAAAAATGATTGTAAAAGCACATACTAATGCGAAAATCCATTCCAACAAAAACAGTCTGAAAATTCTGTCTGTATGAGAAATATGGGAATCCAGAGTACAAAATATGCATATATTGTATTGGTTAGCCACAAAATTGGAGGTTGCCAAAAGAAAAAGAAAAAACAACAATAGGACAAGAATATTTGATTTTATGTAGCAAACAAAAAAAGAACAAGGAAAAAAATAGTTGGGTTAGGGAAATGATTGATTTGATTGCCACGTGTATGTACAGATGATGAGAAGAATGCTAAAAAGGAAGATCCATCCAGAGATTGAGGACAAGGTCAACAGAGCATCAGTTGACCACACACACCAAATAGAATTGGCCACTAATAATGAAGGATTTGAGACCTTTGAATCTCTCTCTCTTCTTCCAACTCAAGGTACACTTCATCCAATCATTCTTTTTTTAAAAATTTGTGCTCGTGATGAACTAATTACTAAGTGATACATGATTTCGTTAAAATATTATTTCTTTTGACCCTCATCCAATCATTTTAATATTTAAGAATATTAAAATAAATTTATTTATTTATTTTTATGCTGAAAAATGAGATGATTTGAGCAGCAATAAAGAGAGTGAGGTAACTATTGTAGAGTTGAGAAAAATGAAGGCTACATTGTAGCACATACCATTGCAACTCTAAAATTAACCATATATAGCAAACTAATATGCTAACCTAGGGTTCAATGGACCTTGACACTCTAAACAAAAAATACTAGAAACAATAGTCTAAAATTGGTATATAATTTTGAAAACATTTCATAAAATAGGAACAATTACCAAACTTCTACATTTATAAGAAACAAGAAACAAAAATAAAATAAAATAACTCATTAGATAATTATTTCATTTTTAATTCTAATTTTTAAGAATTAAGTTTTTATGATACAACATTTATGCAGAATTTTCCGTTTTGTTTTATCTATTTAGTATATATTTTTAAAAGAATAAGTTATATGTTCGAGTTAGCGATTAAACTAAATGATTGTCGATAAGTGGGCGAGTGTGATTCCTTAATTATAAAAAAACACATTTCCAACATATTTATGTTGATTTGATTACAGTCAACCAATCGTTTAACTTAACACAAATCCAACATCTTAAGCTTAGGAACAATGGTGAGACAGCTAAAAACAATGTAGGCCCTCAAAAACATTTGGATAATTTTCCACTCTTCTCATTGTGCATTTAATTTCAATAATGGAAGATTTTAAAATATCATGTACAAAATTTTCATTTCAGTCCTTTTGTTTCCATGTGACATAAAAATTAAATGAGACCATGTGAAACAAAGAGCCCAAAAGCAAAATCCAAGTGAGAAGCAGTCAAACAAATTGGTGAAAAATCATTTCCTATCATACAATTCTTGTAATCAAAATGAATATTGTTATTCAACTAAATGTATACTCATCCAATCATAAATCATTTGGTGGGCTCTCACACTTTTAATTCACTCCACCAAATTTAATCTCTTTTGAATCATTGAATTATATATAATTATTAATTCTCTAAATATCTGCTTGGTTTTTTGTGCTTTTTTTTCCTTTTATGAGCAGGTGTTATTGCTTGATGGATTCAACTAATGGGTGTCTTCTTAAATTGTGTCTCAGCTGATTGCTTTAGAGTTATCTTAATTATCTTATATTAATTAATGAAAACTTTGTTGATTATTTTTATTTTTATTAGTATTATTATTGTTTGTTGTTGTTAATTAGGTTTTGTTGTATATGAAGCTTTAATTAAGGCTACTTGATTCTGTTTTGTAAGTTGTTATGATGTTGTTTTGGGTTTAGTATACAACTCATGAAGTGTGG

mRNA sequence

ATTTCTACTCATTTTGTGTTTTTTTTTCTCTCTCTTTCTTCAGATCTTCAACTGGGTTCACAAGACTTTTCAACATAGCCTTCTCAAGGAGGGTTTTGCTCAAAATGGGACAAAGAAGAGTGAAACTGCATCCATTAATGAAGTGGACAGGCATGCATTGCTAAAACAAGTAGACCTAGATGTGGAAGCCCTTCATGGCTGGAGAGATGGCATTCTCACCATAGGCACATTCGGGTTCGAATCAATGAAACCATCGAACGAGCCAAAGGATTATCTCATGCTCGAAAGCGAAGAAGACGACGAAGACTATGAAGAAGAGGAAGACAAATCATTCATTCACGAGGAAGACAACGACATTATCAACTACCTGGAAAACGAAGAGCTCAACCCGTTGATGTTCACAGCATTCGGACACAAAACAAAGGAAATAAGTGATGCGAAAAGTGGACGTGATGATTTGATGATGGGAGGTTATGAGATGAAGATCGAATCGAAATATAGCGCGATCGTGGAGACGGAGGCGGACGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATAACACTGGCAGACTTGTTCTTGGCTGAAGCTGGGGCTGTGGGAAGAAGAGAAGTGCTTGAGGATCAAAAAGGGATTCAAAAGAAAACTGGTGATGTGAGAAGTAAGAGCAGTCTCTCCTTTGCCAAGAAGCTGATTCCTCGAGTCAAGGAAGATTCACACCCAATTAAGAACTTTCAACGGATGATGAGAAGAATGCTAAAAAGGAAGATCCATCCAGAGATTGAGGACAAGGTCAACAGAGCATCAGTTGACCACACACACCAAATAGAATTGGCCACTAATAATGAAGGATTTGAGACCTTTGAATCTCTCTCTCTTCTTCCAACTCAAGGTGTTATTGCTTGATGGATTCAACTAATGGGTGTCTTCTTAAATTGTGTCTCAGCTGATTGCTTTAGAGTTATCTTAATTATCTTATATTAATTAATGAAAACTTTGTTGATTATTTTTATTTTTATTAGTATTATTATTGTTTGTTGTTGTTAATTAGGTTTTGTTGTATATGAAGCTTTAATTAAGGCTACTTGATTCTGTTTTGTAAGTTGTTATGATGTTGTTTTGGGTTTAGTATACAACTCATGAAGTGTGG

Coding sequence (CDS)

ATGAAACCATCGAACGAGCCAAAGGATTATCTCATGCTCGAAAGCGAAGAAGACGACGAAGACTATGAAGAAGAGGAAGACAAATCATTCATTCACGAGGAAGACAACGACATTATCAACTACCTGGAAAACGAAGAGCTCAACCCGTTGATGTTCACAGCATTCGGACACAAAACAAAGGAAATAAGTGATGCGAAAAGTGGACGTGATGATTTGATGATGGGAGGTTATGAGATGAAGATCGAATCGAAATATAGCGCGATCGTGGAGACGGAGGCGGACGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATAACACTGGCAGACTTGTTCTTGGCTGAAGCTGGGGCTGTGGGAAGAAGAGAAGTGCTTGAGGATCAAAAAGGGATTCAAAAGAAAACTGGTGATGTGAGAAGTAAGAGCAGTCTCTCCTTTGCCAAGAAGCTGATTCCTCGAGTCAAGGAAGATTCACACCCAATTAAGAACTTTCAACGGATGATGAGAAGAATGCTAAAAAGGAAGATCCATCCAGAGATTGAGGACAAGGTCAACAGAGCATCAGTTGACCACACACACCAAATAGAATTGGCCACTAATAATGAAGGATTTGAGACCTTTGAATCTCTCTCTCTTCTTCCAACTCAAGGTGTTATTGCTTGA

Protein sequence

MKPSNEPKDYLMLESEEDDEDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKTKEISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVGRREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEIEDKVNRASVDHTHQIELATNNEGFETFESLSLLPTQGVIA

Homology

[Close]

BLAST of Sed0010537.2 vs. NCBI nr
Match: XP_038875598.1 (protein TILLER ANGLE CONTROL 1 [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 1.8e-68
Identity = 156/219 (71.23%), Postives = 182/219 (83.11%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDD-EDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKT 60
           +KPSNE K+YL+LESEEDD ED EEEE+KS +++ED+DII YLE+EELNPLMFTAFGHK+
Sbjct: 71  LKPSNEQKEYLVLESEEDDYEDKEEEEEKSLVNDEDDDIIGYLEDEELNPLMFTAFGHKS 130

Query: 61  KEISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVG 120
           K++   K   +DL++G Y    ESKYS I+E E +EE+KKKGERRITLADLFLA+A  V 
Sbjct: 131 KDVCVEKG--EDLIIGAY----ESKYSGIMEME-NEEKKKKGERRITLADLFLADARDVA 190

Query: 121 RREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEI 180
           +   LED K +QKKT DVRSKS LSFAKKLIPRVKEDSHPIKNFQR+MRRMLK+KIHPEI
Sbjct: 191 K--ALEDDKVLQKKTADVRSKSGLSFAKKLIPRVKEDSHPIKNFQRLMRRMLKKKIHPEI 250

Query: 181 EDKVNRASVDHTHQIELATNNEGFETFESLSLLPTQGVI 219
           EDK+N+AS D THQI +  NN GFETFESLSLLPTQ  I
Sbjct: 251 EDKINKASPDLTHQIGM-PNNGGFETFESLSLLPTQDAI 279

[Close]

BLAST of Sed0010537.2 vs. NCBI nr
Match: XP_004140615.1 (uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus] >KGN46544.1 hypothetical protein Csa_005546 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 9.1e-65
Identity = 153/224 (68.30%), Postives = 177/224 (79.02%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDD-EDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKT 60
           +KPSNE K+Y MLESEEDD ED EEEE+KSF+H+ED+DII YLENEELNPLM  AFGHK+
Sbjct: 71  LKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNPLMLKAFGHKS 130

Query: 61  KEISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVG 120
           K++S A+ G DDL+          KY+AI+E E +EEEKKKGERRITLADLFLA+A  V 
Sbjct: 131 KDVS-AEKGEDDLI----------KYNAIMEME-NEEEKKKGERRITLADLFLADARDVA 190

Query: 121 RREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEI 180
           +  VLED K +QKKT DVRSKS LSFAKK IPRVKEDSHPIKNFQR+MRRM+KRKIHPEI
Sbjct: 191 K--VLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEI 250

Query: 181 EDKV--NRASVDH--THQIELATNNEGFETFESLSLLPTQGVIA 220
           EDKV  N+ S     THQI +  NN  F++FES+SLLPTQG  A
Sbjct: 251 EDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADA 280

[Close]

BLAST of Sed0010537.2 vs. NCBI nr
Match: XP_011656860.1 (uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 9.1e-65
Identity = 153/224 (68.30%), Postives = 177/224 (79.02%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDD-EDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKT 60
           +KPSNE K+Y MLESEEDD ED EEEE+KSF+H+ED+DII YLENEELNPLM  AFGHK+
Sbjct: 71  LKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNPLMLKAFGHKS 130

Query: 61  KEISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVG 120
           K++S A+ G DDL+          KY+AI+E E +EEEKKKGERRITLADLFLA+A  V 
Sbjct: 131 KDVS-AEKGEDDLI----------KYNAIMEME-NEEEKKKGERRITLADLFLADARDVA 190

Query: 121 RREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEI 180
           +  VLED K +QKKT DVRSKS LSFAKK IPRVKEDSHPIKNFQR+MRRM+KRKIHPEI
Sbjct: 191 K--VLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEI 250

Query: 181 EDKV--NRASVDH--THQIELATNNEGFETFESLSLLPTQGVIA 220
           EDKV  N+ S     THQI +  NN  F++FES+SLLPTQ  IA
Sbjct: 251 EDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280

[Close]

BLAST of Sed0010537.2 vs. NCBI nr
Match: XP_022958918.1 (adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058.1 adoMet-dependent rRNA methyltransferase SPB1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-64
Identity = 148/226 (65.49%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDD----EDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFG 60
           +KPSN+  +YL+L+SE+DD    E+ EEEE+KSF+HEED+D I+++++EELNPLMFT FG
Sbjct: 70  LKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEELNPLMFTTFG 129

Query: 61  HKTKEISDAKSGRDDLMMGGYE--MKIESKYSAIVETEADEEEKKKGERRITLADLFLAE 120
           HK+K+++  K G  DL++G YE  M +ESKY+ I+E E D EEKKK ERRITLADLFLA+
Sbjct: 130 HKSKDVNGEKGG--DLIIGAYELNMNMESKYNEIMEMEED-EEKKKVERRITLADLFLAD 189

Query: 121 AGAVGRREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRK 180
           AG V +   LE++K +QKKTGDVR+KS LSFAKKLIPRVKEDSHPIKN QR+MRRMLKRK
Sbjct: 190 AGDVAK--ALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRRMLKRK 249

Query: 181 IHPEIEDKVNRA-SVDHTHQIELATNNEGFETFESLSLLPTQGVIA 220
           IHPEIEDK+N+A S D THQI    N+EGFE FE+LSLLP Q  +A
Sbjct: 250 IHPEIEDKINKASSSDQTHQIG-TPNHEGFEGFEALSLLPIQDAVA 289

[Close]

BLAST of Sed0010537.2 vs. NCBI nr
Match: XP_023549056.1 (adoMet-dependent rRNA methyltransferase SPB1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-64
Identity = 148/226 (65.49%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDD----EDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFG 60
           +KPSN+  +YL+L+SE+DD    E+ EEEE+KSF+HEED+D I+++++EELNPLMFT FG
Sbjct: 75  LKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEELNPLMFTTFG 134

Query: 61  HKTKEISDAKSGRDDLMMGGYE--MKIESKYSAIVETEADEEEKKKGERRITLADLFLAE 120
           HK+K+++  K G  DL++G YE  M +ESKY+ I+E E D EEKKK ERRITLADLFLA+
Sbjct: 135 HKSKDVNGEKGG--DLIIGAYELNMNMESKYNEIMEMEED-EEKKKVERRITLADLFLAD 194

Query: 121 AGAVGRREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRK 180
           AG V +   LE++K +QKKTGDVR+KS LSFAKKLIPRVKEDSHPIKN QR+MRRMLKRK
Sbjct: 195 AGDVAK--ALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRRMLKRK 254

Query: 181 IHPEIEDKVNRA-SVDHTHQIELATNNEGFETFESLSLLPTQGVIA 220
           IHPEIEDK+N+A S D THQI    N+EGFE FE+LSLLP Q  +A
Sbjct: 255 IHPEIEDKINKASSSDQTHQIG-TPNHEGFEGFEALSLLPIQDAVA 294

[Close]

BLAST of Sed0010537.2 vs. ExPASy Swiss-Prot
Match: U3MMQ4 (Protein TILLER ANGLE CONTROL 1 OS=Prunus persica OX=3760 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-28
Identity = 99/237 (41.77%), Postives = 142/237 (59.92%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDDEDYEEEEDKSFIH----EEDNDIINY---LENEELNPLMFT 60
           +KPS    +Y +LESEEDD     +E   F H    ++D+D  +Y   +E+EELNPLMFT
Sbjct: 69  LKPSTHQNEYFVLESEEDD-----QESHGFSHSGNDDDDDDDEHYDHSVEDEELNPLMFT 128

Query: 61  AFGHKTKEISD------AKSGRDDLMMGGYEM---KIESKYSAIVETEADEEEKKKGERR 120
            F H  ++I         K     L + G  +   +  S+ S   +  A+++ K K  +R
Sbjct: 129 TFEHSFEDIGSNFDAIVQKPADVILTVDGVPLTPFEGSSEISTKPDQSANDQSKNKKGQR 188

Query: 121 ITLADLFLAEAGAVGRREVLEDQKGIQ---KKTGDVRSKSSLSFAKKLIPRVKEDSHPIK 180
           ITLADLF A+   VG+ ++  D   +Q   +K  + R++S L+FAKKLIPRVK+DS PIK
Sbjct: 189 ITLADLFQADVPDVGQLKL--DSGKVQPEMEKKMNARTRSGLAFAKKLIPRVKDDSSPIK 248

Query: 181 NFQRMMRRMLKRKIHP-EIEDKVNRA-SVDHTHQIELATNNEGFETFESLSLLPTQG 217
           N QR+MRRMLKRKIHP E+E K++++        +EL +N E  + +ES+SLLP QG
Sbjct: 249 NMQRLMRRMLKRKIHPAELEVKIHKSDGQKQPSAVELISNVEN-DAYESVSLLPIQG 297

[Close]

BLAST of Sed0010537.2 vs. ExPASy TrEMBL
Match: A0A0A0KCK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.4e-65
Identity = 153/224 (68.30%), Postives = 177/224 (79.02%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDD-EDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKT 60
           +KPSNE K+Y MLESEEDD ED EEEE+KSF+H+ED+DII YLENEELNPLM  AFGHK+
Sbjct: 71  LKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNPLMLKAFGHKS 130

Query: 61  KEISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVG 120
           K++S A+ G DDL+          KY+AI+E E +EEEKKKGERRITLADLFLA+A  V 
Sbjct: 131 KDVS-AEKGEDDLI----------KYNAIMEME-NEEEKKKGERRITLADLFLADARDVA 190

Query: 121 RREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEI 180
           +  VLED K +QKKT DVRSKS LSFAKK IPRVKEDSHPIKNFQR+MRRM+KRKIHPEI
Sbjct: 191 K--VLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEI 250

Query: 181 EDKV--NRASVDH--THQIELATNNEGFETFESLSLLPTQGVIA 220
           EDKV  N+ S     THQI +  NN  F++FES+SLLPTQG  A
Sbjct: 251 EDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADA 280

[Close]

BLAST of Sed0010537.2 vs. ExPASy TrEMBL
Match: A0A6J1H4F7 (adoMet-dependent rRNA methyltransferase SPB1 OS=Cucurbita moschata OX=3662 GN=LOC111460066 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 5.8e-65
Identity = 148/226 (65.49%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDD----EDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFG 60
           +KPSN+  +YL+L+SE+DD    E+ EEEE+KSF+HEED+D I+++++EELNPLMFT FG
Sbjct: 70  LKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEELNPLMFTTFG 129

Query: 61  HKTKEISDAKSGRDDLMMGGYE--MKIESKYSAIVETEADEEEKKKGERRITLADLFLAE 120
           HK+K+++  K G  DL++G YE  M +ESKY+ I+E E D EEKKK ERRITLADLFLA+
Sbjct: 130 HKSKDVNGEKGG--DLIIGAYELNMNMESKYNEIMEMEED-EEKKKVERRITLADLFLAD 189

Query: 121 AGAVGRREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRK 180
           AG V +   LE++K +QKKTGDVR+KS LSFAKKLIPRVKEDSHPIKN QR+MRRMLKRK
Sbjct: 190 AGDVAK--ALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRRMLKRK 249

Query: 181 IHPEIEDKVNRA-SVDHTHQIELATNNEGFETFESLSLLPTQGVIA 220
           IHPEIEDK+N+A S D THQI    N+EGFE FE+LSLLP Q  +A
Sbjct: 250 IHPEIEDKINKASSSDQTHQIG-TPNHEGFEGFEALSLLPIQDAVA 289

[Close]

BLAST of Sed0010537.2 vs. ExPASy TrEMBL
Match: A0A6J1L2P4 (eukaryotic translation initiation factor 5B OS=Cucurbita maxima OX=3661 GN=LOC111499297 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 9.9e-65
Identity = 148/228 (64.91%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 1   MKPSNEPKDYLML------ESEEDDEDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTA 60
           +KPSN+  +YL+L      E EE++E+ EEEE+KSF+HEEDND I+++++EELNPLMFT 
Sbjct: 70  LKPSNKQMEYLVLKSEDNEEEEEEEEEEEEEEEKSFVHEEDNDSIDFVDDEELNPLMFTT 129

Query: 61  FGHKTKEISDAKSGRDDLMMGGYE--MKIESKYSAIVETEADEEEKKKGERRITLADLFL 120
           FGHK+K+++  K G  DL++G YE  M +ESKY+ I+E E D EEKKK ERRITLADLFL
Sbjct: 130 FGHKSKDVNGEKGG--DLIIGAYELNMNMESKYNEIMEMEED-EEKKKVERRITLADLFL 189

Query: 121 AEAGAVGRREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLK 180
           A+AG V +   LE++K +QKKTGDVR+KS LSFAKKLIPRVKEDSHPIKN QR+MRRMLK
Sbjct: 190 ADAGDVAK--ALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRRMLK 249

Query: 181 RKIHPEIEDKVNRA-SVDHTHQIELATNNEGFETFESLSLLPTQGVIA 220
           RKIHPEIEDK+N+A S D THQI    N+EGFE FE+LSLLP Q  +A
Sbjct: 250 RKIHPEIEDKINKASSSDQTHQIG-TPNHEGFEGFEALSLLPIQDAVA 291

[Close]

BLAST of Sed0010537.2 vs. ExPASy TrEMBL
Match: A0A1S3CAZ2 (U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 GN=LOC103498785 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.7e-64
Identity = 148/222 (66.67%), Postives = 175/222 (78.83%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLESEEDDEDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKTK 60
           +KPSNE K+Y  LESEEDD + EEEE+KSF+H+ED+DII YLENEELNPLMF AFGHK+K
Sbjct: 71  LKPSNEQKEYFALESEEDDYEDEEEEEKSFVHDEDDDIIGYLENEELNPLMFKAFGHKSK 130

Query: 61  EISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVGR 120
           ++S  + G DDL+          KY+AI+E E +EEEKKKGERRITLADLFLA+A  V +
Sbjct: 131 DVS-VEKGEDDLI----------KYNAIMEME-NEEEKKKGERRITLADLFLADARDVAK 190

Query: 121 REVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEIE 180
              LED K +QKKT DVRSKS LSFAKK IPRVKEDSHPIKNFQR+MRRM+KRKIHPE+E
Sbjct: 191 --ALEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEVE 250

Query: 181 DK--VNRASVD-HTHQIELATNNEGFETFESLSLLPTQGVIA 220
           DK  +N+ S D  THQI +  NN  F++FES+SLLPTQ  IA
Sbjct: 251 DKIIINKPSSDLITHQIGIIPNNGPFQSFESISLLPTQDAIA 278

[Close]

BLAST of Sed0010537.2 vs. ExPASy TrEMBL
Match: A0A6J1E003 (uncharacterized protein LOC111025094 OS=Momordica charantia OX=3673 GN=LOC111025094 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-63
Identity = 148/220 (67.27%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MKPSNEPKDYLMLES-EEDDEDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKT 60
           +K   EP +YL++ES EE+D++ EEEE+KSF+HEED DII+Y E+EELNPLM TAF HK 
Sbjct: 69  LKLPTEPNEYLVIESEEEEDDEEEEEEEKSFVHEEDEDIIDYFEDEELNPLMLTAFRHKG 128

Query: 61  KEISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVG 120
           K++S  K    DL++ GYE   ESKYS I+E E +E++KK GERRITLADLFLA+A  VG
Sbjct: 129 KDVSGEK--ERDLILRGYE--FESKYSRIIEIE-NEDKKKGGERRITLADLFLADASEVG 188

Query: 121 RREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEI 180
            R    DQK + KKT DVR+KSSLSFAKKLIPRVKEDSHPIKNFQR+MRRMLKRKIHPEI
Sbjct: 189 MRLKNGDQKVMHKKTADVRTKSSLSFAKKLIPRVKEDSHPIKNFQRLMRRMLKRKIHPEI 248

Query: 181 EDKVNRASVDHTHQIELATNNEGFETFESLSLLPTQGVIA 220
           EDK+N+ SVDHT Q   +  NEGF+T ESLSLLPTQ  IA
Sbjct: 249 EDKINK-SVDHTTQQIGSATNEGFKTSESLSLLPTQDAIA 282

The following BLAST results are available for this feature:

BLAST of Sed0010537.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875598.1	1.8e-68	71.23	protein TILLER ANGLE CONTROL 1 [Benincasa hispida]	[more]
XP_004140615.1	9.1e-65	68.30	uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus] >KGN46544.1 hy...	[more]
XP_011656860.1	9.1e-65	68.30	uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus]	[more]
XP_022958918.1	1.2e-64	65.49	adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058....	[more]
XP_023549056.1	1.2e-64	65.49	adoMet-dependent rRNA methyltransferase SPB1 isoform X1 [Cucurbita pepo subsp. p...	[more]

BLAST of Sed0010537.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
U3MMQ4	1.4e-28	41.77	Protein TILLER ANGLE CONTROL 1 OS=Prunus persica OX=3760 GN=TAC1 PE=2 SV=1	[more]

BLAST of Sed0010537.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCK2	4.4e-65	68.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1	[more]
A0A6J1H4F7	5.8e-65	65.49	adoMet-dependent rRNA methyltransferase SPB1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1L2P4	9.9e-65	64.91	eukaryotic translation initiation factor 5B OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3CAZ2	1.7e-64	66.67	U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 G...	[more]
A0A6J1E003	1.4e-63	67.27	uncharacterized protein LOC111025094 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Sed0010537.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
IPR044989	Protein TILLER ANGLE CONTROL 1	PANTHER	PTHR38366	NAD-DEPENDENT PROTEIN DEACETYLASE HST1-LIKE PROTEIN	coord: 2..217

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0010537	Sed0010537	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010537.2-five_prime_utr	Sed0010537.2-five_prime_utr-LG09:7559456..7559544	five_prime_UTR
Sed0010537.2-five_prime_utr	Sed0010537.2-five_prime_utr-LG09:7560289..7560443	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010537.2-exon	Sed0010537.2-exon-LG09:7559456..7559544	exon
Sed0010537.2-exon	Sed0010537.2-exon-LG09:7560289..7560938	exon
Sed0010537.2-exon	Sed0010537.2-exon-LG09:7561989..7562139	exon
Sed0010537.2-exon	Sed0010537.2-exon-LG09:7563317..7563574	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010537.2-cds	Sed0010537.2-cds-LG09:7560444..7560938	CDS
Sed0010537.2-cds	Sed0010537.2-cds-LG09:7561989..7562139	CDS
Sed0010537.2-cds	Sed0010537.2-cds-LG09:7563317..7563330	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010537.2-three_prime_utr	Sed0010537.2-three_prime_utr-LG09:7563331..7563574	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0010537.2	Sed0010537.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001763	morphogenesis of a branching structure
biological_process	GO:0032259	methylation
biological_process	GO:0006413	translational initiation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003743	translation initiation factor activity