Sed0010537 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGTTCTTTGTCCCCACACATGTCCTCTCCTTATGCCCCCTTCCTTTTGGCCCCCTTTACCATTCAACTCTCATCTTCCCCCATAACTATTTCTTCATTCTTTCTTTCTCATTTCTAACTCAAACCAATATTTTTCAACAAAAATGAAGGTCTTTAACATTCTTTATCTTTTCTCTTTTATTTTAATTTCCTATAATAATATTTCTACTCATTTTGTGTTTTTTTTTCTCTCTCTTTCTTCAGATCTTCAACTGGGTTCACAAGACTTTTCAACATAGCCTTCTCAAGGGTTTCTCTCTTCAACTTCTCTATGAAAAAAAAAAACATTTACTATATTCTATGTTTTCATGTATACAATATTTCTATTTTTTTTCTTTAAGAGTTTAGCAATTGCACGAATATGAGTTCCAAGTTCCAACGTTTAGGATGGTAATAATGATTTATGCTTTTTTTTTTTTTTAATTTAACACTAATGGCTGAATATAAGATAATATGGAGTTATGCCTAAAAACCAATTGATACTGAATAGAATAATTCATATATTTTATAAAGATATTGAAAATTCCTAATTTTTTTTATATGTACGATAAGGTGAGTATCTCCAACCGAAAGAAAATTTAAATTCATAATATTTTGATTACTAGATCATAAAAGATGTTATTAGAGCCTATGCTCATACAAGGGTCATTAGAGCATGGGCTCCATTTACTATATATATATATTAGATTATGCTATTTTCATTTTTAGAAGTTTAAGAATGAAAAAATAGAGAAAACCAAAGAGATTTTAGATCTCTTTTAAAAGGTGATAAGCCTAAAATTAAGAAGTGAGTTTAATTATAAAATATTTTGTTATCCTTAAGATCTAAACTTTGAAACAAGTATGAGTGCGTCAAAATATATCGTAGGCCAACTATTAAGTTAAATGGTTGTCTATAAATGAGAGCTCCAATTTTTCGAAAACAAATAGAGAAATTCTAGCTTTTGTTACTGATCCTACATTTGACTATCAAGAGTTGCTATTTGTTTTTCAGAGGGTTTTGCTCAAAATGGGACAAAGAAGAGTGAAACTGCATCCATTAATGAAGTGGACAGGCATGCATTGCTAAAACAAGTAGACCTAGATGTGGAAGCCCTTCATGGCTGGAGAGATGGCATTCTCACCATAGGCACATTCGGGTTCGAATCAATGAAACCATCGAACGAGCCAAAGGATTATCTCATGCTCGAAAGCGAAGAAGACGACGAAGACTATGAAGAAGAGGAAGACAAATCATTCATTCACGAGGAAGACAACGACATTATCAACTACCTGGAAAACGAAGAGCTCAACCCGTTGATGTTCACAGCATTCGGACACAAAACAAAGGAAATAAGTGATGCGAAAAGTGGACGTGATGATTTGATGATGGGAGGTTATGAGATGAAGATCGAATCGAAATATAGCGCGATCGTGGAGACGGAGGCGGACGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATAACACTGGCAGACTTGTTCTTGGCTGAAGCTGGGGCTGTGGGAAGAAGAGAAGTGCTTGAGGATCAAAAAGGGATTCAAAAGAAAACTGGTGATGTGAGAAGTAAGAGCAGTCTCTCCTTTGCCAAGAAGCTGATTCCTCGAGTCAAGGAAGATTCACACCCAATTAAGAACTTTCAACGGGTGAGTAATCTTTTTTATGGCTCTGATACCATGTTGAATCATTTAATTACACAATATATAATTAATTGAAATCAATTTTAACTACAGAACTGGATATAAGGGAGGATAGGAGCACCTTGGCCTCTCAAAATTTTAGAATTGGTCATTTCTTTTGTAGGTAGAAATAGACCCGTATATATTTTTATAGTATTTATTACAAATAAATAAGATGGTTGGTGGTATTAGAGAGTATGAGGTTCCACTTCAAAACCAATTGACAATGAAGGGACCCTACTTTTCTAATGTGGGGGAATATAAGGTTTCAACTCAAAACTAAATAATAATGAAGGGAATAATTCATATCTCTTATAAATGTTTGTAGTACTTCTCATTTTTCAAAGTGGGATAATTGTTAAATCCTAAGGTGATCCCTTCCAATTTTAAAATTTTTTGTTATTTTTTAGGTATAAAAGTAGATTCCAACTGTTGGCCCCACGAAATAGTGGAATTTGTGATTTCTTTAACATGTATAAGTAAACTTTTTTAAATAATTTAAATAATGGCTCTTCCAAATTAATTTTTGTAAGTCTTCTCTAGGATGTGGGCTTGATAGGTTCTTAAAATAGTTGTTGGAATGAGCTTTGGATAAGTTTTAAGACTAGTATTATTTATGATGATCATTGAAACATCTTTTCACTATGTTGTAGAAAATTTATGGTCAAGGTTTCAAATGTTACTTTTTACCACTTCAAAAGTCAATTCTAGCTAGCTTGAAAAAGATATTATTTTAGTACTTATAAAAAAATGATTGTAAAAGCACATACTAATGCGAAAATCCATTCCAACAAAAACAGTCTGAAAATTCTGTCTGTATGAGAAATATGGGAATCCAGAGTACAAAATATGCATATATTGTATTGGTTAGCCACAAAATTGGAGGTTGCCAAAAGAAAAAGAAAAAACAACAATAGGACAAGAATATTTGATTTTATGTAGCAAACAAAAAAAGAACAAGGAAAAAAATAGTTGGGTTAGGGAAATGATTGATTTGATTGCCACGTGTATGTACAGATGATGAGAAGAATGCTAAAAAGGAAGATCCATCCAGAGATTGAGGACAAGGTCAACAGAGCATCAGTTGACCACACACACCAAATAGAATTGGCCACTAATAATGAAGGATTTGAGACCTTTGAATCTCTCTCTCTTCTTCCAACTCAAGGTACACTTCATCCAATCATTCTTTTTTTAAAAATTTGTGCTCGTGATGAACTAATTACTAAGTGATACATGATTTCGTTAAAATATTATTTCTTTTGACCCTCATCCAATCATTTTAATATTTAAGAATATTAAAATAAATTTATTTATTTATTTTTATGCTGAAAAATGAGATGATTTGAGCAGCAATAAAGAGAGTGAGGTAACTATTGTAGAGTTGAGAAAAATGAAGGCTACATTGTAGCACATACCATTGCAACTCTAAAATTAACCATATATAGCAAACTAATATGCTAACCTAGGGTTCAATGGACCTTGACACTCTAAACAAAAAATACTAGAAACAATAGTCTAAAATTGGTATATAATTTTGAAAACATTTCATAAAATAGGAACAATTACCAAACTTCTACATTTATAAGAAACAAGAAACAAAAATAAAATAAAATAACTCATTAGATAATTATTTCATTTTTAATTCTAATTTTTAAGAATTAAGTTTTTATGATACAACATTTATGCAGAATTTTCCGTTTTGTTTTATCTATTTAGTATATATTTTTAAAAGAATAAGTTATATGTTCGAGTTAGCGATTAAACTAAATGATTGTCGATAAGTGGGCGAGTGTGATTCCTTAATTATAAAAAAACACATTTCCAACATATTTATGTTGATTTGATTACAGTCAACCAATCGTTTAACTTAACACAAATCCAACATCTTAAGCTTAGGAACAATGGTGAGACAGCTAAAAACAATGTAGGCCCTCAAAAACATTTGGATAATTTTCCACTCTTCTCATTGTGCATTTAATTTCAATAATGGAAGATTTTAAAATATCATGTACAAAATTTTCATTTCAGTCCTTTTGTTTCCATGTGACATAAAAATTAAATGAGACCATGTGAAACAAAGAGCCCAAAAGCAAAATCCAAGTGAGAAGCAGTCAAACAAATTGGTGAAAAATCATTTCCTATCATACAATTCTTGTAATCAAAATGAATATTGTTATTCAACTAAATGTATACTCATCCAATCATAAATCATTTGGTGGGCTCTCACACTTTTAATTCACTCCACCAAATTTAATCTCTTTTGAATCATTGAATTATATATAATTATTAATTCTCTAAATATCTGCTTGGTTTTTTGTGCTTTTTTTTCCTTTTATGAGCAGGTGTTATTGCTTGATGGATTCAACTAATGGGTGTCTTCTTAAATTGTGTCTCAGCTGATTGCTTTAGAGTTATCTTAATTATCTTATATTAATTAATGAAAACTTTGTTGATTATTTTTATTTTTATTAGTATTATTATTGTTTGTTGTTGTTAATTAGGTTTTGTTGTATATGAAGCTTTAATTAAGGCTACTTGATTCTGTTTTGTAAGTTGTTATGATGTTGTTTTGGGTTTAGTATACAACTCATGAAGTGTGG CTTGTTCTTTGTCCCCACACATGTCCTCTCCTTATGCCCCCTTCCTTTTGGCCCCCTTTACCATTCAACTCTCATCTTCCCCCATAACTATTTCTTCATTCTTTCTTTCTCATTTCTAACTCAAACCAATATTTTTCAACAAAAATGAAGATCTTCAACTGGGTTCACAAGACTTTTCAACATAGCCTTCTCAAGGAGGGTTTTGCTCAAAATGGGACAAAGAAGAGTGAAACTGCATCCATTAATGAAGTGGACAGGCATGCATTGCTAAAACAAGTAGACCTAGATGTGGAAGCCCTTCATGGCTGGAGAGATGGCATTCTCACCATAGGCACATTCGGGTTCGAATCAATGAAACCATCGAACGAGCCAAAGGATTATCTCATGCTCGAAAGCGAAGAAGACGACGAAGACTATGAAGAAGAGGAAGACAAATCATTCATTCACGAGGAAGACAACGACATTATCAACTACCTGGAAAACGAAGAGCTCAACCCGTTGATGTTCACAGCATTCGGACACAAAACAAAGGAAATAAGTGATGCGAAAAGTGGACGTGATGATTTGATGATGGGAGGTTATGAGATGAAGATCGAATCGAAATATAGCGCGATCGTGGAGACGGAGGCGGACGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATAACACTGGCAGACTTGTTCTTGGCTGAAGCTGGGGCTGTGGGAAGAAGAGAAGTGCTTGAGGATCAAAAAGGGATTCAAAAGAAAACTGGTGATGTGAGAAGTAAGAGCAGTCTCTCCTTTGCCAAGAAGCTGATTCCTCGAGTCAAGGAAGATTCACACCCAATTAAGAACTTTCAACGGATGATGAGAAGAATGCTAAAAAGGAAGATCCATCCAGAGATTGAGGACAAGGTCAACAGAGCATCAGTTGACCACACACACCAAATAGAATTGGCCACTAATAATGAAGGATTTGAGACCTTTGAATCTCTCTCTCTTCTTCCAACTCAAGGTGTTATTGCTTGATGGATTCAACTAATGGGTGTCTTCTTAAATTGTGTCTCAGCTGATTGCTTTAGAGTTATCTTAATTATCTTATATTAATTAATGAAAACTTTGTTGATTATTTTTATTTTTATTAGTATTATTATTGTTTGTTGTTGTTAATTAGGTTTTGTTGTATATGAAGCTTTAATTAAGGCTACTTGATTCTGTTTTGTAAGTTGTTATGATGTTGTTTTGGGTTTAGTATACAACTCATGAAGTGTGG ATGAAGATCTTCAACTGGGTTCACAAGACTTTTCAACATAGCCTTCTCAAGGAGGGTTTTGCTCAAAATGGGACAAAGAAGAGTGAAACTGCATCCATTAATGAAGTGGACAGGCATGCATTGCTAAAACAAGTAGACCTAGATGTGGAAGCCCTTCATGGCTGGAGAGATGGCATTCTCACCATAGGCACATTCGGGTTCGAATCAATGAAACCATCGAACGAGCCAAAGGATTATCTCATGCTCGAAAGCGAAGAAGACGACGAAGACTATGAAGAAGAGGAAGACAAATCATTCATTCACGAGGAAGACAACGACATTATCAACTACCTGGAAAACGAAGAGCTCAACCCGTTGATGTTCACAGCATTCGGACACAAAACAAAGGAAATAAGTGATGCGAAAAGTGGACGTGATGATTTGATGATGGGAGGTTATGAGATGAAGATCGAATCGAAATATAGCGCGATCGTGGAGACGGAGGCGGACGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATAACACTGGCAGACTTGTTCTTGGCTGAAGCTGGGGCTGTGGGAAGAAGAGAAGTGCTTGAGGATCAAAAAGGGATTCAAAAGAAAACTGGTGATGTGAGAAGTAAGAGCAGTCTCTCCTTTGCCAAGAAGCTGATTCCTCGAGTCAAGGAAGATTCACACCCAATTAAGAACTTTCAACGGATGATGAGAAGAATGCTAAAAAGGAAGATCCATCCAGAGATTGAGGACAAGGTCAACAGAGCATCAGTTGACCACACACACCAAATAGAATTGGCCACTAATAATGAAGGATTTGAGACCTTTGAATCTCTCTCTCTTCTTCCAACTCAAGGTGTTATTGCTTGA MKIFNWVHKTFQHSLLKEGFAQNGTKKSETASINEVDRHALLKQVDLDVEALHGWRDGILTIGTFGFESMKPSNEPKDYLMLESEEDDEDYEEEEDKSFIHEEDNDIINYLENEELNPLMFTAFGHKTKEISDAKSGRDDLMMGGYEMKIESKYSAIVETEADEEEKKKGERRITLADLFLAEAGAVGRREVLEDQKGIQKKTGDVRSKSSLSFAKKLIPRVKEDSHPIKNFQRMMRRMLKRKIHPEIEDKVNRASVDHTHQIELATNNEGFETFESLSLLPTQGVIA Homology
BLAST of Sed0010537 vs. NCBI nr
Match: XP_038875598.1 (protein TILLER ANGLE CONTROL 1 [Benincasa hispida]) HSP 1 Score: 391.7 bits (1005), Expect = 5.3e-105 Identity = 215/289 (74.39%), Postives = 246/289 (85.12%), Query Frame = 0
BLAST of Sed0010537 vs. NCBI nr
Match: XP_022958918.1 (adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058.1 adoMet-dependent rRNA methyltransferase SPB1 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 381.3 bits (978), Expect = 7.2e-102 Identity = 207/295 (70.17%), Postives = 247/295 (83.73%), Query Frame = 0
BLAST of Sed0010537 vs. NCBI nr
Match: XP_023006624.1 (eukaryotic translation initiation factor 5B [Cucurbita maxima]) HSP 1 Score: 380.6 bits (976), Expect = 1.2e-101 Identity = 207/297 (69.70%), Postives = 246/297 (82.83%), Query Frame = 0
BLAST of Sed0010537 vs. NCBI nr
Match: KAG6575241.1 (hypothetical protein SDJN03_25880, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379.0 bits (972), Expect = 3.6e-101 Identity = 206/295 (69.83%), Postives = 246/295 (83.39%), Query Frame = 0
BLAST of Sed0010537 vs. NCBI nr
Match: KAG7013806.1 (hypothetical protein SDJN02_23973 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376.3 bits (965), Expect = 2.3e-100 Identity = 205/297 (69.02%), Postives = 245/297 (82.49%), Query Frame = 0
BLAST of Sed0010537 vs. ExPASy Swiss-Prot
Match: U3MMQ4 (Protein TILLER ANGLE CONTROL 1 OS=Prunus persica OX=3760 GN=TAC1 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.5e-51 Identity = 141/307 (45.93%), Postives = 192/307 (62.54%), Query Frame = 0
BLAST of Sed0010537 vs. ExPASy Swiss-Prot
Match: F4IJ79 (Protein TILLER ANGLE CONTROL 1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12 Identity = 77/268 (28.73%), Postives = 128/268 (47.76%), Query Frame = 0
BLAST of Sed0010537 vs. ExPASy TrEMBL
Match: A0A6J1H4F7 (adoMet-dependent rRNA methyltransferase SPB1 OS=Cucurbita moschata OX=3662 GN=LOC111460066 PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 3.5e-102 Identity = 207/295 (70.17%), Postives = 247/295 (83.73%), Query Frame = 0
BLAST of Sed0010537 vs. ExPASy TrEMBL
Match: A0A6J1L2P4 (eukaryotic translation initiation factor 5B OS=Cucurbita maxima OX=3661 GN=LOC111499297 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 6.0e-102 Identity = 207/297 (69.70%), Postives = 246/297 (82.83%), Query Frame = 0
BLAST of Sed0010537 vs. ExPASy TrEMBL
Match: A0A0A0KCK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 2.5e-100 Identity = 211/294 (71.77%), Postives = 238/294 (80.95%), Query Frame = 0
BLAST of Sed0010537 vs. ExPASy TrEMBL
Match: A0A1S3CAZ2 (U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 GN=LOC103498785 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 7.3e-100 Identity = 206/292 (70.55%), Postives = 237/292 (81.16%), Query Frame = 0
BLAST of Sed0010537 vs. ExPASy TrEMBL
Match: A0A6J1E003 (uncharacterized protein LOC111025094 OS=Momordica charantia OX=3673 GN=LOC111025094 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.8e-98 Identity = 205/289 (70.93%), Postives = 239/289 (82.70%), Query Frame = 0
BLAST of Sed0010537 vs. TAIR 10
Match: AT2G46640.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 5.5e-15 Identity = 76/266 (28.57%), Postives = 128/266 (48.12%), Query Frame = 0
BLAST of Sed0010537 vs. TAIR 10
Match: AT2G46640.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages. ) HSP 1 Score: 75.5 bits (184), Expect = 7.9e-14 Identity = 77/268 (28.73%), Postives = 128/268 (47.76%), Query Frame = 0
BLAST of Sed0010537 vs. TAIR 10
Match: AT2G46640.1 (unknown protein; Has 19 Blast hits to 19 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09 Identity = 66/241 (27.39%), Postives = 113/241 (46.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|