Sed0009947.2 (mRNA) Chayote v1

Overview


Name	Sed0009947.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Craniofacial development protein 1
Location	LG09: 7779857 .. 7789826 (+)
Sequence length	1262
RNA-Seq Expression	Sed0009947.2
Synteny	Sed0009947.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCGGTTCACGGTTTGTTTGTTGTTGTTTTATAGGGTTACAATGTTTCAACCGAACAAGGCTCAAAATACTGTCTTCTTCACTCTTCGACTCCGGCGAACGGAGAACGGAGAACGGCCAGCGACGAGCAAGACAACGGGATTTAAGGGTTCGATTCCGTTTCATTGCCGCGATCTTTCAGGTTCTTCATTGGATTAGGTTTCGTTTGATTCTTATTTCTTTTTCTTCTAATTTTCAACCCTTAAATCCGCACTTTCCTGATTACTCTGTTTATGTACGCATTGTTTGATGGGTTTTTTGCTCCATTTTTGTTGATTCAATTCTTTGAGCTTTCTGTTTAACTGGCATATTGCATTTTATTTTTGGAAACCCAGATCCCAATAGCCCAGATAACCATGTCCGTCCCTAGGCCAGGTAGGAGATGGAAGGGAAATTTGAGCCCGCCCGAAAAATTAGTCCTCGAGAGCCCGAGTCATATTGGTGTACTTGGCTATACATTAGCTCTACTATTGATGTACTTGGTGCTCATATACAAAAGATTGATTTTTTTTTTAAACAAGTGTAACCACGCCCGTCCCTAAGCCAAGCACCAGGAGACATCGAAAGAGTAATGTTACAGGTGAATCTCTTGAACCTGAGACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCAAGCACTGTGCTACCCCTTGGGGACACAAAAAAATATTGAAAATAAAAAAAAAAGATTGGAAATTGGAACCAGGTGTTTTGGTCATGATATGTGATATGTGGTTAAAAGGTGTGAGAAACTATACTATATGTGGCCTACCTCTGGTTTTATTGATTATCAAGGAAGCAGCATTATCATCTTTGATTGTTTTTGGAATTCTTCACAATCAGCTTGGGATATTGGCTTTGGTAGGAAGCTCATTGAAGCTGAAATAACAGAATGGGCTCATCTATCCAATCTTTGATCATTGGTAGCCTTGAGGGATTCCCATGATTCTTGGATTTGCCTCACCCTTCTAATTCTTTTACTGTTAGTTCCTTAATGGAAGATTTTGATTCATTCAAAGGGCTTAGGGCCCAACTTCAACTAAGCTTTACTCTCTTCTTTAGGAAGATGTTTATCCTAAGAAAATAAAGGTTTTCTCATGGGAGCTTAGCCATGGGGTATTAATACTACTGATCATTTACAATGTTGAATGCCTCATTGTTCCCTATTTCCTTCTTGCTTCATGTTGTGCAAATTTGATGCTGAGACTCTGGCTCATTTATTTGGTTGTTCTTTCACCCCTTTATTGGTCTCAGATATTTGCATATTTTGGTTGGAGTTTAGGCTGTTTGGCTCTGCCCTACAACATGTTTGATCTTATCTTTGTGGGTCATATTTTCATAGACCAAAGAAGTTTTATGACTAGCTTTTAATGGTGTTCTTTTGAACTCTTTGGTGTGAGAGAAGTCTCCTATTTTCCAAAGATTTAGCATCCAATTTGTATAGTTTTATGGAATTAATTTTTTATAATTCTCTTAAAGGTGTAAATGTTAACACCCATTTTTTTTATTATAGTCTTTCATTTTTTATTACTAATTGGAGATCTCTCGTACGGTATAATACACTTTTTGTTTATTGGAGTGTTCATTCCTTTTATGTCATTGAACATAGAATCCCCTCAATTCTCAATGTTACATTAGTTAATGTCCAAAACCTCCAGCTATTTTTCTTGATTTTTAGGATTTTACCTTCGGAATTCAGTTTTTGAACTGTACTAAGATGTCAAATTCATATTTTGAAGACAATTCCTCTATGGGCAAGATAATTTGAGTGAACATAAGACATTTGCTTTTTTTTAAAAAAAAAAGAATTCAATTACATTTTGGGCGGAGAGATTCAAACTCGTGACCTTACTCATAGCATATATTTTGGGCTAGTTGGGCTATCTTGTTGGAAAAGTGTATGTGTATTGAAATAATGAAAATGAGATGGTTGTTCATTGGTGCTTTATCATCTTTTGTTGTGTCCTAGTATCTTTATCTTCTGGCTCATGTTTAAGTGTTTAATTTCCATTAATACTTTATCTCATTTAGTTACCAAAGCATTTGTTAATCATTTTTTCTCAAGTATTGGTTCATATATAGTAACACACTTCATGCAAGGTTTGGAGCTTTTCCTAATTTTCCTTGAAAGGTTGACTTTATTCTTTACATGTCAGATTTTGTGAATGAAATAATAATGGAATCGGCTAAAGAAGAATCTACTCATCTTTGTTCTGAGGAAAAGCTTGGTGACACAGGTAATATTAGGGAGTGGACATGGACCAGATTTTGTTGCTTGTAGCTTTATTTATTTTTCTCTACTTTTTTTGCTTCTCTCATGTAACATGTTGATATGTAGATTAAGAAATATAATTTTATTCTTCTTTTTCTTGCTAGAAACAAAAGCTCGTGTCGATGCCATGTGGGAGAAAATGAATAAAGGGGTGTCTAATAAAACCTTGAAAGTTTTGTCAACCAAACGATCTCCAGCAGGGAACAAAAACTCAAAGAAGTCAAACAATGTAAAAATTCACACTCTTTTCTTTCACAATGAGGTCAAAAAATGGAAAACAAAATAATATTTCTCTAAATTTTTTCTATCCCCATCTCCCCCTGTCTAGAATTGGATTTCATATCTTGGAATGGCGTCGAAGAAGGTCGAACCTCAAGAAAAAGCTATGTCATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTGCTGATGATGCTAAGCTGCTTGCTGCCACTGCTCTTTCAGCTGTTAGGGACCAAGCTTCAGCTACCATTTCTGGCAGGGGGAAAGTTGAGGTGCCAATACTATCCTCATTATGCTTTGTTTTTATTTACTACAATTTTCTATGTTCTGAGTCTTATAGAGCTGAGAGTGGATTTTATTGGTATGCCATCAATTAATCAGTTATTTGGATTTTTTTTTATTTGAAACAATAAAATTGATTGATGTATGAAAATGGTTTCGAATGAGCAAACAAAGTAGTGATTCATAATCTTTGAAAGGATGTACACAGTGATCCCATGATATAGCTAAAAAAGTGATATTTTCCATCAGATTGCCTTTGTCTTTAGGTTTAGGTATCTCTATGAAGGTTTTACTCTAACAAGCACGGACATAGACACGAGATACGGACACGACATGACATGGACACACCATTATTTAAAAATACAGGACACGGATACTACGTTGAGGACACGTGATTTACTATTATTTTTTATAATATACTATTAAAAGATGAAATCCAAAATATTTTAGTTAGTTATTAGCCTACCCATAATAATCTCTAAATATTTTAGTTTTTATCTTGTTTTCCTTCCCTCCATTTTATTTTCTCTCTGTCTTTCCTTTTTTCATTTTAGTCCATCTATCTTCAATAGACATTGTCGTCGATGGCCTCCCCCAATGCTATCCGTTGTTGTGTCATTTGCCATTGGAAACAAAAAGTCTTAATTAAGGTGTCCATGAAGTGTCCATGGTGTGTCCGAAATTGAAATCAATAATAATAAAAGAGGACACAGAATTTTGAATGTCGGACACGAGTACGACACGAATACATTGTCAAAATAGAAGTGTCCGTACTTCCTAGGTGTTGAAAGTTAGGGTTAGATTTGTAATCTTGTAAATTATATTTATCTAATTCTAGTTTGTGGGTTGTTAGGTAAGTGAGAGTCTATAGGAGAGTTGTTATGTTTGTTAGGTAAGTGAGGGTCTATAGGAAAGTTGTTATTTTTGTTTTGATTTCCTTTTGGTGTGTATTTATACGTACGTGATTATTGAATAAAGCAAGAAATCAGAGTTTCTTCATGGTATCAGAGCAGAAGATTCACTCTCTCCTCAGATTAAATTCTCTCTCCTATTCGTCGGAATCTCCTCGCCAAGCACATCGAATCAGCGAGCCTCCGACGTCCTTCAGAATTTCCTCGCCGAGCACACCGACTCAGCGAGCCTCCGGATCTCCAAACCTGAATCGTCAACTTCGAGCATCGTTGGTACGCGTCAAACCCGCGAAGCTTCTTCGCCGCTGCGAATCAGTTCCGCGAAACCTCGTTAGTTCGCTATCGAGTTCTCCTCTGCTTCGGTCAAGGGCCCAATCAGATCATTGCCGCTGCAATTCAGATCATTTCATTGCCTCTCCACCTCGACTCTTGCTGCTTTGCCTCTCCGCACCAGAAATTGAGTCATCACCGTTGCGAATCTCGTCAGAATCAGATCCATCACGCTTCCCCTGCGTTCGCTCCAGCGAGGTTCGCTATCTGTTCTAAAGATCGTCAATCTTTGTTCGCTCCAGCGAGGTAACCCTTTTCCCATATCTATTCTAACGGTTAGCTTTGTTCGCTGTGCTGGTTAGCTCCGTTCGCTGTGTTGTGCCGTATTTCAAATAGTTTTATATTATGGCTTCATCTAAGGATTATACACTAGGAAGTTTTGATTCGTCACCAATGTGTATTACTGGTCATAAATTGAATGATCATAATTATGTTCAATGGTCGCAAGTGGTACACATGTTCGTTTGCGGTAAGGGTAAGGATGATTATCTATCCAAGGAAAAGGAGCAACCAAAAGAAGGTGATCCGGAATACAAACAGTGGAAAATAGACAATAACCTGGTAATGTCGTGGTTAATTAATTCCATGACTACTGAAATTGGGGAAAATTTCTTCCTCTGCGACACAGCCTATTGTATTTGGGAAGCAGCCAAAGAAACCTACTCTAGTAAGGAGAACACCTCTGAGTTGTTTCGAATCGAGTCTGTTCTCTATGATCTCCGTCAAGGAGACCAATCGGTCACCGAGTATTTTAACAACCTCTCACGTCATTGGCAACAATTAGATCTATTTGAACTACATACCTGGAAGTGTCCTGATGATAAGACATAATATAACAAGATCACAAAACAGAAGAGAACATTTAAGTTTCTCTTTGGCCTGAACAGTAATCTGGACGAAGTTCGGGGACGAATCTTGGGAGTCAAGCCCTTGGTGTCTCTTCGTGAAGCTTTCTCGGAAATCCGAAGATAGGAAAGCAGGAAAAGTATTATGATGGGCAAATCAGAATCAGTTCCAATCTCTGATGCTTCTGCACTCGTGTCTAGAAATTTCAGTTCAACAGGAAACCCTGGAGACAGTAGGTTCCGGCAAGGGAGGCCTTGGTGTGACCATTGCAAAAAACCAGGCCATGTGAAGGAGACCTGTTGGAAAATCCATGGGAAACCAGCTGATTGGAAACCTCGAAACCAGAATGATTGTGACAGTAGGGCATATGTGGCCAATGTCGTACCTGGTAAGAATGCCAGTATAGAATCTTCTCCTTTTAGCAGGGAACAGATGGATGCACTCCAAAAACTCATAGGTGACACAATCCAGGGAAGTGGTCTAGTTGCTCAGAAAGTTGCACCAACCGCCCTAACTGCGAATAAGGGAGGAACTCAGCCCTAGATCATAGATACCGGAGCCTCCGATCATATGACAGGAGATAAGTCATTGTTTCAACAATATCAGGCCGATACATCCAATGCGTCCATCAAGATTGCAGATGGGTCACACTCGAAAATATTAAGAACAGGTTCTATCCGTATCTATCCCAACTTATCTCTTACATCTGTTCTTCATGTGCCCGATTTGGATTGTAATCTTCTTTCAATAAGCAAATTGACTCGCGATTTAAACTGTGTGGCTAAATTCTATTCCAATTCATGCGTTTTTCAGGATTTGGAATCGGGGCGGATGATTGGCAGTGCTGAAGTCTGTTCGGGTCTCTACCACCTCAACTATGATCACGGTTTATTGACAAATGGAGACAAGTCATCCTTTCTATCTTTCCATTCCAGCAATAAAATGTCTAGTAGCTTCAATAACGATAATGTTACATTATCGTCTAGGTCATCCCAACTTTGCGTATCTGTCTAAATTGTTCCCGAATCTTTTCTATAATAAAAATCCTCATTCTTTTTCATGTGAGATTTGTCAAATTGCGAAACATACTCGTACCTCCTATCCAAGTATAGGGTATAAATCTTCCAGCCCATTTTCGTTAATCCACAGTGATGTTTGGGGCCCCTCTAAAACAAAAATATCTCTGGAGCACGATGGTTCGTGTCCTTCATTGATGATCACACACGTACTACGTGGATCTTTCTTATGCGAGAAAAGTCTGAAGTTTGTTCCCTCTTCAAGCAGTTCCATACCATGATTAAAACGCAATACCAAACTCGCATTCGTGTCTTAAAAACGGATAACGCAAAGGAGTTCTTTAGTTCTAGTCTTGGAGACTACTTGTCCACCGAAGGCATCCTCCATATCAACTCTTGTGTGGACACTCCCCAACAAAATGGGGTTGCTGAGCGGAAAAATCGCCACCTTCTTGACATCACTCGCTGTCTCATGTTCTCTGCCCATGTTCCCAAATTCTATTGGGGCGATGCATTTCTCACGGCTACGTATCTTATCAATCGTATGCCTTCCCGCGTTCTTCAGTTTTCCAGTCCTCGTCAAGTATTTCTCAAGTCTTTTCCTCACCTTCGTCCTCCGTCTCTTGACCTGGCTCCGAAAGTATTTGGATGTAGTGCCTTCGTCCATATACATTCCCATAATCGCGGCAAGCTTGATCCTCGGGCTCATAAATGCATATTCTTGGGGTACTCACCTACTCAAAAGGGGTACAAGTGTTACTCCCCTGAGACAAAAAGAGTCTATGTCACCATGGATGTTACCTTCTGTGAACACCTTCCATACTACTCCAAGCCTGCCTGTCAGGGGGAGATGGTGAGTGACAGCCAGTTATGGTCCTCATGGTCATCTGTTCTTGAAACTATTCCAGATGATACCGTACCTAGTCCCCTCATTCTTGAACCTGAGTCTTCTCCGGCCTCACCTTTAATGTCTCCAATTGTCAATAACCAACTCCGTGTCTATGCAAGGAGAAGCAAACAACGAGTTGAGCAGGCAGATGCCCAAATAGATCAAGCTTTGCCTGATCCCGAACCGGTTCCGAATTTTGAACAACCCATCACAGAACCTAGCAATGCGGTAAACGATGAGATTGATGATCTTGATCTACCAATCGCAATACGGAAAGGGGTTATGAGTTGTACCATGCATCCTATTGGGAATCATGTATCATATGATAACTTGAGTGATTCTTATTGTGCATTTGTGTCTAGTCTCGACGCCACACAAGTGCCAACCAATATTGTAGAAGCATTAAAGCATCCTGGCTGGAAGAAAGCGGTACAAGATGAAATTGAGGCGCTTGAGAAAAATGGTACGTGGAAAATGACAGAATTGCCCAGTGGGAAGCAGGCGTAGGTGCGCAAATGGATATTCACAATTAAGCATAATGCTGATGGAAGTATTGAGAGGTTGAAAGCTAGGCTAGTTGCCAGAGGATTTACCCAGTCATATGGAATTTGATTACCAGGAGACTTTTGCACCAGTTGCTAAACTCAACACAATAAGAATTATCTTGTCTCTTACCGCTAATCTCAGATGGGGACTTCAACAACTGGATATAAAGAACGCTTTTTTGAATGGGGATCTGGAAGAAGAAGTTTATATGGAAGTCCCTCCTGGGTATGAATATGATCTTAGTCCAACAAAGGTACGCCGACTCAAAAAATCTCTGTATGGACTGAAACAATCACCCCGTGCGTGGTTTGGGAGGTTTTCTAGCTTCATTCTAAGCCTTGGATATTCACAGTGTCAGGCAGATCACACACTGTTTGTTAAGAGGAGGTCTGAAACGTCTTTGGCACTATTGATAGTGTATGTGGATGATATTATTTTGACCGGAAATGATGAGCTAGAACTACATGAATTGAAGGAAGCTCTGGCTCAAGAATTTGAAGTCAAAGATCTCGGGAACCTCAGGTATTTCCTAGGTATGGAGGTTGCACGGTCCAAGGCAGGCATAGTTATGTCCCAGAGAAAGTACGTGTTAGATCTTCTTACAGAGACTGGCATGCTGGGATGTAAACCGGCAACATCTCCTATGGATCCTCAGGGAAAGTTCGAACACAGTCATGAAAGCGATCCGTAGACGGGGAGATACGGAGAGGTGGTGGGGCGTCTTATATATCTCTCCCATACTCGACCGGATATTGGATTTGCGGTTAGTGTTGTCGATCGCTTTATGCATAGTCCTAATGACCAACATATGGAAGTCAGATACCGATTCTCGATATACAGAAGATTACTCCTGGAAAGGGGTTGCTATTCAAAAGGACCGATAAGAAGAATATTGAGGTATACTCGGATGCAGATTAGGCGGGGATACTACCGATTGAAGATCGACCTTGGATCTTTATTCGTTTGTTTGGGGCAATCTTGTTACTGAGAAGTAAGAAGCAATCCGTGGTTGCTAGAAGTAGTGCGAAGCGGAATATCGAGCCCCGCCTCAAGGAATGCGTGAAGGCATCCGGATAAGAAGGGTTCTGAGTGAGTTAGGTCAAGAGTACTGATCATCAATTCAAATGATGTGTGATAATCAGGCCACCCTAAGTATTGCCAAAAATCCTGTTCATCATGACAGGACGAAACACGTTGAGATTGACCGACACTTCATTTCTGCGAAAGTTAACAGCCAAGTGGTGCAACTTACCTACGTTCCTACCAAGCAACAAGTGGCAGACATCCTCACTAAACCATTACCAAGACCCAACTTCGAAGACTTGAATAGCAAGCTAGGTTTGTATAATATATACAATCCAGCTTGAGGGGGAGTGTTGAAAGTTAGGGTTAGATTTGTAATCTTGTAAATTATATTTATCTAATTCTGGTTTGTGGGTTGTTAGGTAAGTGAGAGTCTATAGGAGAATTGTTATGTTTGTTAGGTAAGTGAGAGTCTATAGGAGAATTGTTATGTTTGTTAGGTAAGTGAGAGTCTATAGGAGAATTGTTATGTTTGTTAGGTAAGTGAGGGTCTATAGGAAAGTTGTTATTTTTGTTTTGATTTTCTTTTGGTGTGTATTTATACGTACGTAATTATGGAATAAAGCAAGAGTTTCTTCACTAGGCTTTTACCATTTCTAGTCCTCCAAACAGTCCACCAAAATGCGTTTAAAAACAGAATCCACAGTTATTTCTTTTCATCCTTGAAGGGAATTGCCCATGTAAGCTTGATAGGACAGGAAACATAAATTTGCCTCCAATCAGATATTCTGGCTTCCTTCTTTATTTCCGTTCATCAATAAAGTAATACAACTTCTTATAGAACAGTAGATAACAGTAAATTCTGTTTTTTACTTGAACAGATCACAGAGATTAGAGACTTTGCAGGCCAAAATGTCGAAATTAAGAAATTTGTAGAACCGGATTCGAAGGAAGCGTACGAGAAGATGAAGGCATCTGCTACTACTTCAGCGGTTGATGCTGTCCTGGAACAAATTAAAAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTCGATAAAGTTTCGTTTCTGCAGCGAGCCGATTATAGGGAGTTCGAACGAGAGAGGGATGCACGGTTGGCTTTGCAGTCCAGGAGGAGGCCGGATATGCGACAGGAGCCATGACCGAGCCATCATCCGAAGCTCTCGATGGAGAATGTTTCCTATTTGTAAGTTTTTAGAATTTCTTGTGCGGATATGAATTATGATGACATGACAAAAACTGGTAGTGATGCTTCCATGTAAATCAGAGAAATTACAGCACTTTGTAGGTTTCTATAATTGGCATCTGCTCCCAAGTCTTTGCCCTATTCTTGTAGCAGTTATCTTTCATTCTTCTGCATTCGTATAAGAGACATTCTAGTTTGGTTAAATGGGTTTCAATTACAATCCGAACTCCAAAATGTCTTATTTCAATGTAGGTGTTTGGATGAGGAATTGGAAAA

mRNA sequence

AACCGGTTCACGGTTTGTTTGTTGTTGTTTTATAGGGTTACAATGTTTCAACCGAACAAGGCTCAAAATACTGTCTTCTTCACTCTTCGACTCCGGCGAACGGAGAACGGAGAACGGCCAGCGACGAGCAAGACAACGGGATTTAAGGGTTCGATTCCGTTTCATTGCCGCGATCTTTCAGATTTTGTGAATGAAATAATAATGGAATCGGCTAAAGAAGAATCTACTCATCTTTGTTCTGAGGAAAAGCTTGGTGACACAGAAACAAAAGCTCGTGTCGATGCCATGTGGGAGAAAATGAATAAAGGGGTGTCTAATAAAACCTTGAAAGTTTTGTCAACCAAACGATCTCCAGCAGGGAACAAAAACTCAAAGAAGTCAAACAATAATTGGATTTCATATCTTGGAATGGCGTCGAAGAAGGTCGAACCTCAAGAAAAAGCTATGTCATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTGCTGATGATGCTAAGCTGCTTGCTGCCACTGCTCTTTCAGCTGTTAGGGACCAAGCTTCAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGAGACTTTGCAGGCCAAAATGTCGAAATTAAGAAATTTGTAGAACCGGATTCGAAGGAAGCGTACGAGAAGATGAAGGCATCTGCTACTACTTCAGCGGTTGATGCTGTCCTGGAACAAATTAAAAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTCGATAAAGTTTCGTTTCTGCAGCGAGCCGATTATAGGGAGTTCGAACGAGAGAGGGATGCACGGTTGGCTTTGCAGTCCAGGAGGAGGCCGGATATGCGACAGGAGCCATGACCGAGCCATCATCCGAAGCTCTCGATGGAGAATGTTTCCTATTTGTAAGTTTTTAGAATTTCTTGTGCGGATATGAATTATGATGACATGACAAAAACTGGTAGTGATGCTTCCATGTAAATCAGAGAAATTACAGCACTTTGTAGGTTTCTATAATTGGCATCTGCTCCCAAGTCTTTGCCCTATTCTTGTAGCAGTTATCTTTCATTCTTCTGCATTCGTATAAGAGACATTCTAGTTTGGTTAAATGGGTTTCAATTACAATCCGAACTCCAAAATGTCTTATTTCAATGTAGGTGTTTGGATGAGGAATTGGAAAA

Coding sequence (CDS)

ATGTTTCAACCGAACAAGGCTCAAAATACTGTCTTCTTCACTCTTCGACTCCGGCGAACGGAGAACGGAGAACGGCCAGCGACGAGCAAGACAACGGGATTTAAGGGTTCGATTCCGTTTCATTGCCGCGATCTTTCAGATTTTGTGAATGAAATAATAATGGAATCGGCTAAAGAAGAATCTACTCATCTTTGTTCTGAGGAAAAGCTTGGTGACACAGAAACAAAAGCTCGTGTCGATGCCATGTGGGAGAAAATGAATAAAGGGGTGTCTAATAAAACCTTGAAAGTTTTGTCAACCAAACGATCTCCAGCAGGGAACAAAAACTCAAAGAAGTCAAACAATAATTGGATTTCATATCTTGGAATGGCGTCGAAGAAGGTCGAACCTCAAGAAAAAGCTATGTCATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTGCTGATGATGCTAAGCTGCTTGCTGCCACTGCTCTTTCAGCTGTTAGGGACCAAGCTTCAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGAGACTTTGCAGGCCAAAATGTCGAAATTAAGAAATTTGTAGAACCGGATTCGAAGGAAGCGTACGAGAAGATGAAGGCATCTGCTACTACTTCAGCGGTTGATGCTGTCCTGGAACAAATTAAAAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTCGATAAAGTTTCGTTTCTGCAGCGAGCCGATTATAGGGAGTTCGAACGAGAGAGGGATGCACGGTTGGCTTTGCAGTCCAGGAGGAGGCCGGATATGCGACAGGAGCCATGA

Protein sequence

MFQPNKAQNTVFFTLRLRRTENGERPATSKTTGFKGSIPFHCRDLSDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRPDMRQEP

Homology

[Close]

BLAST of Sed0009947.2 vs. NCBI nr
Match: XP_022959426.1 (craniofacial development protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 386.3 bits (991), Expect = 2.3e-103
Identity = 217/254 (85.43%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           SD VNE++MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP 
Sbjct: 10  SDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPV 69

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            NKNSKK +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD 
Sbjct: 70  VNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD- 129

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKK
Sbjct: 130 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKK 189

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL
Sbjct: 190 QKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 249

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 250 ALQARRRPDMREEP 261

[Close]

BLAST of Sed0009947.2 vs. NCBI nr
Match: XP_023547915.1 (craniofacial development protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 6.8e-103
Identity = 216/254 (85.04%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           SD VNE++MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP 
Sbjct: 10  SDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPV 69

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            NKNSKK +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD 
Sbjct: 70  VNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD- 129

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A +SAVDA+LEQIKKK
Sbjct: 130 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-SSAVDAILEQIKKK 189

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL
Sbjct: 190 QKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 249

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 250 ALQARRRPDMREEP 261

[Close]

BLAST of Sed0009947.2 vs. NCBI nr
Match: XP_023547913.1 (craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547914.1 craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.6 bits (984), Expect = 1.5e-102
Identity = 215/254 (84.65%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           +D VNE++MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP 
Sbjct: 37  ADSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPV 96

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            NKNSKK +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD 
Sbjct: 97  VNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD- 156

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A +SAVDA+LEQIKKK
Sbjct: 157 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-SSAVDAILEQIKKK 216

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL
Sbjct: 217 QKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 276

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 277 ALQARRRPDMREEP 288

[Close]

BLAST of Sed0009947.2 vs. NCBI nr
Match: KAG7013702.1 (Craniofacial development protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382.5 bits (981), Expect = 3.4e-102
Identity = 214/255 (83.92%), Postives = 232/255 (90.98%), Query Frame = 0


Query: 45  LSDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSP 104
           +SD VNE++ME+AKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP
Sbjct: 1   MSDSVNEMLMETAKEGSDHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSP 60

Query: 105 AGNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRD 164
             NKNSKK +NNWI+YLGMASKK+EPQ+K   SE  KVLQ+SS DDAK+LAATALSAVRD
Sbjct: 61  VVNKNSKKPSNNWIAYLGMASKKIEPQQKNTLSEEPKVLQDSSMDDAKMLAATALSAVRD 120

Query: 165 QASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKK 224
            A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKK
Sbjct: 121 -ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKK 180

Query: 225 KQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDAR 284
           KQKLSVLDKTKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDAR
Sbjct: 181 KQKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDAR 240

Query: 285 LALQSRRRPDMRQEP 300
           LALQ+RRRPDMR+EP
Sbjct: 241 LALQARRRPDMREEP 253

[Close]

BLAST of Sed0009947.2 vs. NCBI nr
Match: XP_023006641.1 (craniofacial development protein 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 381.7 bits (979), Expect = 5.7e-102
Identity = 214/254 (84.25%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           SD VNE++MESAKE S H+ SE K  DTE KARV+AMWE+MNKGVS+KTLK LSTKRSP 
Sbjct: 10  SDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTKRSPV 69

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            NKNSKK +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD 
Sbjct: 70  VNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD- 129

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKK
Sbjct: 130 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKK 189

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEE KGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDARL
Sbjct: 190 QKLSVLDKTKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDARL 249

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 250 ALQARRRPDMREEP 261

[Close]

BLAST of Sed0009947.2 vs. ExPASy Swiss-Prot
Match: O88271 (Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-12
Identity = 68/205 (33.17%), Postives = 105/205 (51.22%), Query Frame = 0


Query: 107 NKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSS--ADDAKLLAATALSAVRD 166
           N   KK +  W S+L      V P+ KA     +KV + +   + +  L+ A  L   R+
Sbjct: 100 NARKKKEDELWASFL----NDVGPKSKAAPGSQTKVAEETEEISSNKPLVKADELDKPRE 159

Query: 167 QASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA--------YEKMKASATT---- 226
                     KV+IT++ DFAG+ V + K V+  SKEA         EK +A  T+    
Sbjct: 160 SE--------KVKITKVFDFAGEEVRVTKEVDAASKEAKSFLKQTEREKPQALVTSPATP 219

Query: 227 ----------SAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQ 286
                     S + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    
Sbjct: 220 LPAGSGIKRASGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEG 279

[Close]

BLAST of Sed0009947.2 vs. ExPASy Swiss-Prot
Match: Q75UQ2 (Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-12
Identity = 68/201 (33.83%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 111 KKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNS--SADDAKLLAATALSAVRDQASA 170
           KK +  W S+L      V  + KA SS   KV + +  ++    L+ A  L   ++    
Sbjct: 104 KKEDELWASFL----NDVGTKSKAASSSQVKVAEETEETSSSKPLVKADELEKPKESE-- 163

Query: 171 TISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA--------YEKMKASAT--------- 230
                 KV+IT++ DFAG+ V + K V+  SKEA         EK +A  T         
Sbjct: 164 ------KVKITKVFDFAGEEVRVTKEVDATSKEAKSFLKQTEKEKPQALVTSAATPPPAG 223

Query: 231 -----TSAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDK 287
                TS + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    Y+++
Sbjct: 224 SGIKRTSGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEGYIER 283

[Close]

BLAST of Sed0009947.2 vs. ExPASy Swiss-Prot
Match: Q75QI0 (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.8e-12
Identity = 66/204 (32.35%), Postives = 106/204 (51.96%), Query Frame = 0


Query: 108 KNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQAS 167
           +  KK +  W S+L    +K +          +   Q + AD A  + +      + + S
Sbjct: 101 EEKKKEDALWASFLSDVGQKPK----------AAATQATHADKAGEVKSVNKLQGKPKES 160

Query: 168 ATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA------YEKMKASA----------- 227
                 G+V IT++ DFAG+ V + K V+  SKEA       EK ++SA           
Sbjct: 161 EKPKDSGRVTITKVFDFAGEEVRVTKEVDSSSKEAKSFLKQQEKWQSSAPGSLPTVSGVK 220

Query: 228 TTSAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFL 287
             S + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +  + Y+++ +FL
Sbjct: 221 RPSGISSLLGKIGSKKQKMSTLEKSKLDWENFKEE-EGIVEELAIHNRGKDGYIERKAFL 280

Query: 288 QRADYREFERERDARLALQSRRRP 294
           +R D+R+FE ERD RL   SR +P
Sbjct: 281 ERVDHRQFEIERDIRL---SRMKP 290

[Close]

BLAST of Sed0009947.2 vs. ExPASy Swiss-Prot
Match: Q60FC2 (Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.8e-11
Identity = 76/279 (27.24%), Postives = 122/279 (43.73%), Query Frame = 0


Query: 47  DFVNEIIMESA--KEESTHLCS------------EEKLG--DTETKARVDAMWEKMNKGV 106
           D +NE++ E     EE TH+              + K G    E +   DA  E    G 
Sbjct: 28  DDINELVKEDEVDVEEETHIIKGTKRKAERFMPRKRKQGGLSLEEEDEEDAGRESGGSGS 87

Query: 107 SNKTLKVLSTKRSPAGNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADD 166
             +       + + + +   KK +  W S+L     K +         G +  + SS+  
Sbjct: 88  EEEDTATEQEEGTESEDARKKKEDELWASFLNDVGPKSKVPPSTPVKTGEETEETSSS-- 147

Query: 167 AKLLAATALSAVRDQASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKAS- 226
                    + V+ +         KV+IT++ DFAG+ V + K V+P SKEA    K S 
Sbjct: 148 ---------NLVKAEEQEKPKETEKVKITKVFDFAGEEVRVTKEVDPTSKEAKSFFKQSE 207

Query: 227 ---------------------ATTSAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKG 286
                                  +S + ++L +I  KKQK+S L+K+K DW  FKEE +G
Sbjct: 208 KEKPQPNVPSAVSSLPAGSGLKRSSGMSSLLGKIGAKKQKMSTLEKSKLDWENFKEE-EG 267

[Close]

BLAST of Sed0009947.2 vs. ExPASy Swiss-Prot
Match: Q9UEE9 (Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 83/285 (29.12%), Postives = 128/285 (44.91%), Query Frame = 0


Query: 28  TSKTTGFK---GSIPFHCRDLSDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWE 87
           T KT G K    SIP   R        + +E  +EE  +  SE    + E  A       
Sbjct: 45  TQKTQGKKRKAQSIPARKRRQGG----LSLEEEEEEDANSESEGSSSEEEDDA------A 104

Query: 88  KMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQ 147
           +  KG+ ++             +   KK +  W S+L     K +        +G +  +
Sbjct: 105 EQEKGIGSE-------------DARKKKEDELWASFLNDVGPKSKVPPSTQVKKGEETEE 164

Query: 148 NSSADDAKLLAATALSAVRDQASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA-- 207
            SS   +KLL       V+ +         KV+IT++ DFAG+ V + K V+  SKEA  
Sbjct: 165 TSS---SKLL-------VKAEELEKPKETEKVKITKVFDFAGEEVRVTKEVDATSKEAKS 224

Query: 208 ----YEKMKASAT----------------TSAVDAVLEQI-KKKQKLSVLDKTKKDWGEF 267
                EK K  A                 +S + ++L +I  KKQK+S L+K+K DW  F
Sbjct: 225 FFKQNEKEKPQANVPSALPSLPAGSGLKRSSGMSSLLGKIGAKKQKMSTLEKSKLDWESF 284

Query: 268 KEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLA 287
           KEE +G+ E+L  + +    Y+++ +FL R D+R+FE ERD RL+
Sbjct: 285 KEE-EGIGEELAIHNRGKEGYIERKAFLDRVDHRQFEIERDLRLS 295

[Close]

BLAST of Sed0009947.2 vs. ExPASy TrEMBL
Match: A0A6J1H4U3 (craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.1e-103
Identity = 217/254 (85.43%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           SD VNE++MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP 
Sbjct: 10  SDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPV 69

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            NKNSKK +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD 
Sbjct: 70  VNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD- 129

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKK
Sbjct: 130 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKK 189

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL
Sbjct: 190 QKLSVLDKTKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 249

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 250 ALQARRRPDMREEP 261

[Close]

BLAST of Sed0009947.2 vs. ExPASy TrEMBL
Match: A0A6J1KYB0 (craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.8e-102
Identity = 214/254 (84.25%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           SD VNE++MESAKE S H+ SE K  DTE KARV+AMWE+MNKGVS+KTLK LSTKRSP 
Sbjct: 10  SDSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTKRSPV 69

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            NKNSKK +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD 
Sbjct: 70  VNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD- 129

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKK
Sbjct: 130 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKK 189

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEE KGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDARL
Sbjct: 190 QKLSVLDKTKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDARL 249

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 250 ALQARRRPDMREEP 261

[Close]

BLAST of Sed0009947.2 vs. ExPASy TrEMBL
Match: A0A6J1CAE6 (craniofacial development protein 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009682 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 4.7e-102
Identity = 213/254 (83.86%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           SD VNE++MESAKE S H  SE K  DTE KARVDAMWE+MNKG+SNK LK LSTKR PA
Sbjct: 10  SDSVNEMVMESAKEASGHTGSEGKPNDTEIKARVDAMWEQMNKGISNKMLKCLSTKRCPA 69

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            N+NSKK +NNWI+YLGM SKK+EPQ K +SSEGSKVLQNSS DDAK+LAATALSAVRD 
Sbjct: 70  VNRNSKKPSNNWIAYLGMESKKIEPQGKDISSEGSKVLQNSSIDDAKMLAATALSAVRD- 129

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A ATISGRGKVEITEIRDFAGQN+EIKKFV+ DSKEAYEK KA A TS VDAVLEQIKKK
Sbjct: 130 APATISGRGKVEITEIRDFAGQNIEIKKFVDADSKEAYEKAKAGA-TSGVDAVLEQIKKK 189

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYL+KVSFLQR DYREFERERDARL
Sbjct: 190 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLEKVSFLQRTDYREFERERDARL 249

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 250 ALQARRRPDMREEP 261

[Close]

BLAST of Sed0009947.2 vs. ExPASy TrEMBL
Match: A0A6J1L2Q7 (craniofacial development protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 6.2e-102
Identity = 213/254 (83.86%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 46  SDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPA 105
           +D VNE++MESAKE S H+ SE K  DTE KARV+AMWE+MNKGVS+KTLK LSTKRSP 
Sbjct: 11  ADSVNEMLMESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTKRSPV 70

Query: 106 GNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ 165
            NKNSKK +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD 
Sbjct: 71  VNKNSKKPSNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD- 130

Query: 166 ASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKK 225
           A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKK
Sbjct: 131 ATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKK 190

Query: 226 QKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARL 285
           QKLSVLDKTKKDWGEFKEE KGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDARL
Sbjct: 191 QKLSVLDKTKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDARL 250

Query: 286 ALQSRRRPDMRQEP 300
           ALQ+RRRPDMR+EP
Sbjct: 251 ALQARRRPDMREEP 262

[Close]

BLAST of Sed0009947.2 vs. ExPASy TrEMBL
Match: A0A5D3BUX3 (Craniofacial development protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00590 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 6.2e-102
Identity = 214/255 (83.92%), Postives = 233/255 (91.37%), Query Frame = 0


Query: 45  LSDFVNEIIMESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSP 104
           +SD VN+++MESAKE S H+ SE K  DTE KARVD+MWE+MNKGVS+KTLK LSTKRSP
Sbjct: 1   MSDSVNQVLMESAKEGSAHMSSEGKTNDTEIKARVDSMWEQMNKGVSSKTLKGLSTKRSP 60

Query: 105 AGNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRD 164
           A NKNSKK +NNW++YLGMASKK  PQEK + SEGS+VLQNSS DDAK+LAATALSAVRD
Sbjct: 61  AVNKNSKKPSNNWMAYLGMASKK--PQEKDILSEGSRVLQNSSIDDAKMLAATALSAVRD 120

Query: 165 QASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKK 224
            A+ATISGRGKVEITEIRDFAGQNVEIKKFV+ DSKEA+EKMKA A TSAVD VLEQIKK
Sbjct: 121 -ATATISGRGKVEITEIRDFAGQNVEIKKFVDVDSKEAHEKMKAPA-TSAVDVVLEQIKK 180

Query: 225 KQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDAR 284
           KQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQR DYREFERERDAR
Sbjct: 181 KQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRTDYREFERERDAR 240

Query: 285 LALQSRRRPDMRQEP 300
           LALQ+RRRPDMR+EP
Sbjct: 241 LALQARRRPDMREEP 251

[Close]

BLAST of Sed0009947.2 vs. TAIR 10
Match: AT5G30490.1 (CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). )

HSP 1 Score: 222.2 bits (565), Expect = 5.4e-58
Identity = 134/240 (55.83%), Postives = 175/240 (72.92%), Query Frame = 0


Query: 62  THLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYL 121
           +H  S E  G +    +V  +W++MN+GV NK +  +ST   PA N     +N+NW SYL
Sbjct: 3   SHEQSPENNGSSTVSKKVADIWQRMNEGVPNKRVNFVST-ALPAKN----SANSNWKSYL 62

Query: 122 GMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ--ASATISGRGKVEIT 181
           G+  KK   ++  +S     VL +S +++AK +AA AL+AVR+    +A  S RGK+EIT
Sbjct: 63  GVNVKK---KDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTAAAASSRGKIEIT 122

Query: 182 EIRDFAGQNVEIKKFVEPDSKEAYEK-----MKASATTSAVDAVLEQIKKKQKLSVLDKT 241
           E++DFAGQ +E+K+ VE DSKEA E+       +SA  SAVDAVLEQIKKKQKLSVLDKT
Sbjct: 123 EVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQKLSVLDKT 182

Query: 242 KKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRPD 295
           KKDWGE+KEE+KG+E++LD YKKSS+QYLDKV FL+RADYR+FE+ERDARLALQS+RR D
Sbjct: 183 KKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLALQSKRRHD 234

[Close]

BLAST of Sed0009947.2 vs. TAIR 10
Match: AT5G30490.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). )

HSP 1 Score: 222.2 bits (565), Expect = 5.4e-58
Identity = 134/240 (55.83%), Postives = 175/240 (72.92%), Query Frame = 0


Query: 62  THLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYL 121
           +H  S E  G +    +V  +W++MN+GV NK +  +ST   PA N     +N+NW SYL
Sbjct: 3   SHEQSPENNGSSTVSKKVADIWQRMNEGVPNKRVNFVST-ALPAKN----SANSNWKSYL 62

Query: 122 GMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ--ASATISGRGKVEIT 181
           G+  KK   ++  +S     VL +S +++AK +AA AL+AVR+    +A  S RGK+EIT
Sbjct: 63  GVNVKK---KDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTAAAASSRGKIEIT 122

Query: 182 EIRDFAGQNVEIKKFVEPDSKEAYEK-----MKASATTSAVDAVLEQIKKKQKLSVLDKT 241
           E++DFAGQ +E+K+ VE DSKEA E+       +SA  SAVDAVLEQIKKKQKLSVLDKT
Sbjct: 123 EVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQKLSVLDKT 182

Query: 242 KKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRPD 295
           KKDWGE+KEE+KG+E++LD YKKSS+QYLDKV FL+RADYR+FE+ERDARLALQS+RR D
Sbjct: 183 KKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLALQSKRRHD 234

The following BLAST results are available for this feature:

BLAST of Sed0009947.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959426.1	2.3e-103	85.43	craniofacial development protein 1 isoform X1 [Cucurbita moschata]	[more]
XP_023547915.1	6.8e-103	85.04	craniofacial development protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023547913.1	1.5e-102	84.65	craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] ...	[more]
KAG7013702.1	3.4e-102	83.92	Craniofacial development protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006641.1	5.7e-102	84.25	craniofacial development protein 1 isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0009947.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O88271	3.4e-12	33.17	Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1	[more]
Q75UQ2	3.4e-12	33.83	Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 S...	[more]
Q75QI0	9.8e-12	32.35	Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1	[more]
Q60FC2	2.8e-11	27.24	Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 S...	[more]
Q9UEE9	1.8e-10	29.12	Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1	[more]

BLAST of Sed0009947.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4U3	1.1e-103	85.43	craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KYB0	2.8e-102	84.25	craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CAE6	4.7e-102	83.86	craniofacial development protein 1 isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1L2Q7	6.2e-102	83.86	craniofacial development protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5D3BUX3	6.2e-102	83.92	Craniofacial development protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Sed0009947.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G30490.1	5.4e-58	55.83	CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterP...	[more]
AT5G30490.2	5.4e-58	55.83	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 245..265
None	No IPR available	PANTHER	PTHR23227:SF45	SWR1-COMPLEX PROTEIN 5	coord: 63..298
IPR011421	BCNT-C domain	PFAM	PF07572	BCNT	coord: 213..286 e-value: 6.5E-24 score: 83.8
IPR011421	BCNT-C domain	PROSITE	PS51279	BCNT_C	coord: 209..290 score: 19.827114
IPR027124	SWR1-complex protein 5/Craniofacial development protein 1/2	PANTHER	PTHR23227	BUCENTAUR RELATED	coord: 63..298

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009947	Sed0009947	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.2-five_prime_utr	Sed0009947.2-five_prime_utr-LG09:7779857..7779898	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.2-exon	Sed0009947.2-exon-LG09:7779857..7780037	exon
Sed0009947.2-exon	Sed0009947.2-exon-LG09:7782056..7782136	exon
Sed0009947.2-exon	Sed0009947.2-exon-LG09:7782276..7782400	exon
Sed0009947.2-exon	Sed0009947.2-exon-LG09:7782500..7782685	exon
Sed0009947.2-exon	Sed0009947.2-exon-LG09:7789138..7789826	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.2-cds	Sed0009947.2-cds-LG09:7779899..7780037	CDS
Sed0009947.2-cds	Sed0009947.2-cds-LG09:7782056..7782136	CDS
Sed0009947.2-cds	Sed0009947.2-cds-LG09:7782276..7782400	CDS
Sed0009947.2-cds	Sed0009947.2-cds-LG09:7782500..7782685	CDS
Sed0009947.2-cds	Sed0009947.2-cds-LG09:7789138..7789506	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.2-three_prime_utr	Sed0009947.2-three_prime_utr-LG09:7789507..7789826	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009947.2	Sed0009947.2-protein	polypeptide