Sed0009947.1 (mRNA) Chayote v1

Overview


Name	Sed0009947.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Craniofacial development protein 1
Location	LG09: 7779857 .. 7789826 (+)
Sequence length	1279
RNA-Seq Expression	Sed0009947.1
Synteny	Sed0009947.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCGGTTCACGGTTTGTTTGTTGTTGTTTTATAGGGTTACAATGTTTCAACCGAACAAGGCTCAAAATACTGTCTTCTTCACTCTTCGACTCCGGCGAACGGAGAACGGAGAACGGCCAGCGACGAGCAAGACAACGGGATTTAAGGGTTCGATTCCGTTTCATTGCCGCGATCTTTCAGGTTCTTCATTGGATTAGGTTTCGTTTGATTCTTATTTCTTTTTCTTCTAATTTTCAACCCTTAAATCCGCACTTTCCTGATTACTCTGTTTATGTACGCATTGTTTGATGGGTTTTTTGCTCCATTTTTGTTGATTCAATTCTTTGAGCTTTCTGTTTAACTGGCATATTGCATTTTATTTTTGGAAACCCAGATCCCAATAGCCCAGATAACCATGTCCGTCCCTAGGCCAGGTAGGAGATGGAAGGGAAATTTGAGCCCGCCCGAAAAATTAGTCCTCGAGAGCCCGAGTCATATTGGTGTACTTGGCTATACATTAGCTCTACTATTGATGTACTTGGTGCTCATATACAAAAGATTGATTTTTTTTTTAAACAAGTGTAACCACGCCCGTCCCTAAGCCAAGCACCAGGAGACATCGAAAGAGTAATGTTACAGGTGAATCTCTTGAACCTGAGACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCAAGCACTGTGCTACCCCTTGGGGACACAAAAAAATATTGAAAATAAAAAAAAAAGATTGGAAATTGGAACCAGGTGTTTTGGTCATGATATGTGATATGTGGTTAAAAGGTGTGAGAAACTATACTATATGTGGCCTACCTCTGGTTTTATTGATTATCAAGGAAGCAGCATTATCATCTTTGATTGTTTTTGGAATTCTTCACAATCAGCTTGGGATATTGGCTTTGGTAGGAAGCTCATTGAAGCTGAAATAACAGAATGGGCTCATCTATCCAATCTTTGATCATTGGTAGCCTTGAGGGATTCCCATGATTCTTGGATTTGCCTCACCCTTCTAATTCTTTTACTGTTAGTTCCTTAATGGAAGATTTTGATTCATTCAAAGGGCTTAGGGCCCAACTTCAACTAAGCTTTACTCTCTTCTTTAGGAAGATGTTTATCCTAAGAAAATAAAGGTTTTCTCATGGGAGCTTAGCCATGGGGTATTAATACTACTGATCATTTACAATGTTGAATGCCTCATTGTTCCCTATTTCCTTCTTGCTTCATGTTGTGCAAATTTGATGCTGAGACTCTGGCTCATTTATTTGGTTGTTCTTTCACCCCTTTATTGGTCTCAGATATTTGCATATTTTGGTTGGAGTTTAGGCTGTTTGGCTCTGCCCTACAACATGTTTGATCTTATCTTTGTGGGTCATATTTTCATAGACCAAAGAAGTTTTATGACTAGCTTTTAATGGTGTTCTTTTGAACTCTTTGGTGTGAGAGAAGTCTCCTATTTTCCAAAGATTTAGCATCCAATTTGTATAGTTTTATGGAATTAATTTTTTATAATTCTCTTAAAGGTGTAAATGTTAACACCCATTTTTTTTATTATAGTCTTTCATTTTTTATTACTAATTGGAGATCTCTCGTACGGTATAATACACTTTTTGTTTATTGGAGTGTTCATTCCTTTTATGTCATTGAACATAGAATCCCCTCAATTCTCAATGTTACATTAGTTAATGTCCAAAACCTCCAGCTATTTTTCTTGATTTTTAGGATTTTACCTTCGGAATTCAGTTTTTGAACTGTACTAAGATGTCAAATTCATATTTTGAAGACAATTCCTCTATGGGCAAGATAATTTGAGTGAACATAAGACATTTGCTTTTTTTTAAAAAAAAAAGAATTCAATTACATTTTGGGCGGAGAGATTCAAACTCGTGACCTTACTCATAGCATATATTTTGGGCTAGTTGGGCTATCTTGTTGGAAAAGTGTATGTGTATTGAAATAATGAAAATGAGATGGTTGTTCATTGGTGCTTTATCATCTTTTGTTGTGTCCTAGTATCTTTATCTTCTGGCTCATGTTTAAGTGTTTAATTTCCATTAATACTTTATCTCATTTAGTTACCAAAGCATTTGTTAATCATTTTTTCTCAAGTATTGGTTCATATATAGTAACACACTTCATGCAAGGTTTGGAGCTTTTCCTAATTTTCCTTGAAAGGTTGACTTTATTCTTTACATGTCAGATTTTGTGAATGAAATAATAATGGAATCGGCTAAAGAAGAATCTACTCATCTTTGTTCTGAGGAAAAGCTTGGTGACACAGGTAATATTAGGGAGTGGACATGGACCAGATTTTGTTGCTTGTAGCTTTATTTATTTTTCTCTACTTTTTTTGCTTCTCTCATGTAACATGTTGATATGTAGATTAAGAAATATAATTTTATTCTTCTTTTTCTTGCTAGAAACAAAAGCTCGTGTCGATGCCATGTGGGAGAAAATGAATAAAGGGGTGTCTAATAAAACCTTGAAAGTTTTGTCAACCAAACGATCTCCAGCAGGGAACAAAAACTCAAAGAAGTCAAACAATGTAAAAATTCACACTCTTTTCTTTCACAATGAGGTCAAAAAATGGAAAACAAAATAATATTTCTCTAAATTTTTTCTATCCCCATCTCCCCCTGTCTAGAATTGGATTTCATATCTTGGAATGGCGTCGAAGAAGGTCGAACCTCAAGAAAAAGCTATGTCATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTGCTGATGATGCTAAGCTGCTTGCTGCCACTGCTCTTTCAGCTGTTAGGGACCAAGCTTCAGCTACCATTTCTGGCAGGGGGAAAGTTGAGGTGCCAATACTATCCTCATTATGCTTTGTTTTTATTTACTACAATTTTCTATGTTCTGAGTCTTATAGAGCTGAGAGTGGATTTTATTGGTATGCCATCAATTAATCAGTTATTTGGATTTTTTTTTATTTGAAACAATAAAATTGATTGATGTATGAAAATGGTTTCGAATGAGCAAACAAAGTAGTGATTCATAATCTTTGAAAGGATGTACACAGTGATCCCATGATATAGCTAAAAAAGTGATATTTTCCATCAGATTGCCTTTGTCTTTAGGTTTAGGTATCTCTATGAAGGTTTTACTCTAACAAGCACGGACATAGACACGAGATACGGACACGACATGACATGGACACACCATTATTTAAAAATACAGGACACGGATACTACGTTGAGGACACGTGATTTACTATTATTTTTTATAATATACTATTAAAAGATGAAATCCAAAATATTTTAGTTAGTTATTAGCCTACCCATAATAATCTCTAAATATTTTAGTTTTTATCTTGTTTTCCTTCCCTCCATTTTATTTTCTCTCTGTCTTTCCTTTTTTCATTTTAGTCCATCTATCTTCAATAGACATTGTCGTCGATGGCCTCCCCCAATGCTATCCGTTGTTGTGTCATTTGCCATTGGAAACAAAAAGTCTTAATTAAGGTGTCCATGAAGTGTCCATGGTGTGTCCGAAATTGAAATCAATAATAATAAAAGAGGACACAGAATTTTGAATGTCGGACACGAGTACGACACGAATACATTGTCAAAATAGAAGTGTCCGTACTTCCTAGGTGTTGAAAGTTAGGGTTAGATTTGTAATCTTGTAAATTATATTTATCTAATTCTAGTTTGTGGGTTGTTAGGTAAGTGAGAGTCTATAGGAGAGTTGTTATGTTTGTTAGGTAAGTGAGGGTCTATAGGAAAGTTGTTATTTTTGTTTTGATTTCCTTTTGGTGTGTATTTATACGTACGTGATTATTGAATAAAGCAAGAAATCAGAGTTTCTTCATGGTATCAGAGCAGAAGATTCACTCTCTCCTCAGATTAAATTCTCTCTCCTATTCGTCGGAATCTCCTCGCCAAGCACATCGAATCAGCGAGCCTCCGACGTCCTTCAGAATTTCCTCGCCGAGCACACCGACTCAGCGAGCCTCCGGATCTCCAAACCTGAATCGTCAACTTCGAGCATCGTTGGTACGCGTCAAACCCGCGAAGCTTCTTCGCCGCTGCGAATCAGTTCCGCGAAACCTCGTTAGTTCGCTATCGAGTTCTCCTCTGCTTCGGTCAAGGGCCCAATCAGATCATTGCCGCTGCAATTCAGATCATTTCATTGCCTCTCCACCTCGACTCTTGCTGCTTTGCCTCTCCGCACCAGAAATTGAGTCATCACCGTTGCGAATCTCGTCAGAATCAGATCCATCACGCTTCCCCTGCGTTCGCTCCAGCGAGGTTCGCTATCTGTTCTAAAGATCGTCAATCTTTGTTCGCTCCAGCGAGGTAACCCTTTTCCCATATCTATTCTAACGGTTAGCTTTGTTCGCTGTGCTGGTTAGCTCCGTTCGCTGTGTTGTGCCGTATTTCAAATAGTTTTATATTATGGCTTCATCTAAGGATTATACACTAGGAAGTTTTGATTCGTCACCAATGTGTATTACTGGTCATAAATTGAATGATCATAATTATGTTCAATGGTCGCAAGTGGTACACATGTTCGTTTGCGGTAAGGGTAAGGATGATTATCTATCCAAGGAAAAGGAGCAACCAAAAGAAGGTGATCCGGAATACAAACAGTGGAAAATAGACAATAACCTGGTAATGTCGTGGTTAATTAATTCCATGACTACTGAAATTGGGGAAAATTTCTTCCTCTGCGACACAGCCTATTGTATTTGGGAAGCAGCCAAAGAAACCTACTCTAGTAAGGAGAACACCTCTGAGTTGTTTCGAATCGAGTCTGTTCTCTATGATCTCCGTCAAGGAGACCAATCGGTCACCGAGTATTTTAACAACCTCTCACGTCATTGGCAACAATTAGATCTATTTGAACTACATACCTGGAAGTGTCCTGATGATAAGACATAATATAACAAGATCACAAAACAGAAGAGAACATTTAAGTTTCTCTTTGGCCTGAACAGTAATCTGGACGAAGTTCGGGGACGAATCTTGGGAGTCAAGCCCTTGGTGTCTCTTCGTGAAGCTTTCTCGGAAATCCGAAGATAGGAAAGCAGGAAAAGTATTATGATGGGCAAATCAGAATCAGTTCCAATCTCTGATGCTTCTGCACTCGTGTCTAGAAATTTCAGTTCAACAGGAAACCCTGGAGACAGTAGGTTCCGGCAAGGGAGGCCTTGGTGTGACCATTGCAAAAAACCAGGCCATGTGAAGGAGACCTGTTGGAAAATCCATGGGAAACCAGCTGATTGGAAACCTCGAAACCAGAATGATTGTGACAGTAGGGCATATGTGGCCAATGTCGTACCTGGTAAGAATGCCAGTATAGAATCTTCTCCTTTTAGCAGGGAACAGATGGATGCACTCCAAAAACTCATAGGTGACACAATCCAGGGAAGTGGTCTAGTTGCTCAGAAAGTTGCACCAACCGCCCTAACTGCGAATAAGGGAGGAACTCAGCCCTAGATCATAGATACCGGAGCCTCCGATCATATGACAGGAGATAAGTCATTGTTTCAACAATATCAGGCCGATACATCCAATGCGTCCATCAAGATTGCAGATGGGTCACACTCGAAAATATTAAGAACAGGTTCTATCCGTATCTATCCCAACTTATCTCTTACATCTGTTCTTCATGTGCCCGATTTGGATTGTAATCTTCTTTCAATAAGCAAATTGACTCGCGATTTAAACTGTGTGGCTAAATTCTATTCCAATTCATGCGTTTTTCAGGATTTGGAATCGGGGCGGATGATTGGCAGTGCTGAAGTCTGTTCGGGTCTCTACCACCTCAACTATGATCACGGTTTATTGACAAATGGAGACAAGTCATCCTTTCTATCTTTCCATTCCAGCAATAAAATGTCTAGTAGCTTCAATAACGATAATGTTACATTATCGTCTAGGTCATCCCAACTTTGCGTATCTGTCTAAATTGTTCCCGAATCTTTTCTATAATAAAAATCCTCATTCTTTTTCATGTGAGATTTGTCAAATTGCGAAACATACTCGTACCTCCTATCCAAGTATAGGGTATAAATCTTCCAGCCCATTTTCGTTAATCCACAGTGATGTTTGGGGCCCCTCTAAAACAAAAATATCTCTGGAGCACGATGGTTCGTGTCCTTCATTGATGATCACACACGTACTACGTGGATCTTTCTTATGCGAGAAAAGTCTGAAGTTTGTTCCCTCTTCAAGCAGTTCCATACCATGATTAAAACGCAATACCAAACTCGCATTCGTGTCTTAAAAACGGATAACGCAAAGGAGTTCTTTAGTTCTAGTCTTGGAGACTACTTGTCCACCGAAGGCATCCTCCATATCAACTCTTGTGTGGACACTCCCCAACAAAATGGGGTTGCTGAGCGGAAAAATCGCCACCTTCTTGACATCACTCGCTGTCTCATGTTCTCTGCCCATGTTCCCAAATTCTATTGGGGCGATGCATTTCTCACGGCTACGTATCTTATCAATCGTATGCCTTCCCGCGTTCTTCAGTTTTCCAGTCCTCGTCAAGTATTTCTCAAGTCTTTTCCTCACCTTCGTCCTCCGTCTCTTGACCTGGCTCCGAAAGTATTTGGATGTAGTGCCTTCGTCCATATACATTCCCATAATCGCGGCAAGCTTGATCCTCGGGCTCATAAATGCATATTCTTGGGGTACTCACCTACTCAAAAGGGGTACAAGTGTTACTCCCCTGAGACAAAAAGAGTCTATGTCACCATGGATGTTACCTTCTGTGAACACCTTCCATACTACTCCAAGCCTGCCTGTCAGGGGGAGATGGTGAGTGACAGCCAGTTATGGTCCTCATGGTCATCTGTTCTTGAAACTATTCCAGATGATACCGTACCTAGTCCCCTCATTCTTGAACCTGAGTCTTCTCCGGCCTCACCTTTAATGTCTCCAATTGTCAATAACCAACTCCGTGTCTATGCAAGGAGAAGCAAACAACGAGTTGAGCAGGCAGATGCCCAAATAGATCAAGCTTTGCCTGATCCCGAACCGGTTCCGAATTTTGAACAACCCATCACAGAACCTAGCAATGCGGTAAACGATGAGATTGATGATCTTGATCTACCAATCGCAATACGGAAAGGGGTTATGAGTTGTACCATGCATCCTATTGGGAATCATGTATCATATGATAACTTGAGTGATTCTTATTGTGCATTTGTGTCTAGTCTCGACGCCACACAAGTGCCAACCAATATTGTAGAAGCATTAAAGCATCCTGGCTGGAAGAAAGCGGTACAAGATGAAATTGAGGCGCTTGAGAAAAATGGTACGTGGAAAATGACAGAATTGCCCAGTGGGAAGCAGGCGTAGGTGCGCAAATGGATATTCACAATTAAGCATAATGCTGATGGAAGTATTGAGAGGTTGAAAGCTAGGCTAGTTGCCAGAGGATTTACCCAGTCATATGGAATTTGATTACCAGGAGACTTTTGCACCAGTTGCTAAACTCAACACAATAAGAATTATCTTGTCTCTTACCGCTAATCTCAGATGGGGACTTCAACAACTGGATATAAAGAACGCTTTTTTGAATGGGGATCTGGAAGAAGAAGTTTATATGGAAGTCCCTCCTGGGTATGAATATGATCTTAGTCCAACAAAGGTACGCCGACTCAAAAAATCTCTGTATGGACTGAAACAATCACCCCGTGCGTGGTTTGGGAGGTTTTCTAGCTTCATTCTAAGCCTTGGATATTCACAGTGTCAGGCAGATCACACACTGTTTGTTAAGAGGAGGTCTGAAACGTCTTTGGCACTATTGATAGTGTATGTGGATGATATTATTTTGACCGGAAATGATGAGCTAGAACTACATGAATTGAAGGAAGCTCTGGCTCAAGAATTTGAAGTCAAAGATCTCGGGAACCTCAGGTATTTCCTAGGTATGGAGGTTGCACGGTCCAAGGCAGGCATAGTTATGTCCCAGAGAAAGTACGTGTTAGATCTTCTTACAGAGACTGGCATGCTGGGATGTAAACCGGCAACATCTCCTATGGATCCTCAGGGAAAGTTCGAACACAGTCATGAAAGCGATCCGTAGACGGGGAGATACGGAGAGGTGGTGGGGCGTCTTATATATCTCTCCCATACTCGACCGGATATTGGATTTGCGGTTAGTGTTGTCGATCGCTTTATGCATAGTCCTAATGACCAACATATGGAAGTCAGATACCGATTCTCGATATACAGAAGATTACTCCTGGAAAGGGGTTGCTATTCAAAAGGACCGATAAGAAGAATATTGAGGTATACTCGGATGCAGATTAGGCGGGGATACTACCGATTGAAGATCGACCTTGGATCTTTATTCGTTTGTTTGGGGCAATCTTGTTACTGAGAAGTAAGAAGCAATCCGTGGTTGCTAGAAGTAGTGCGAAGCGGAATATCGAGCCCCGCCTCAAGGAATGCGTGAAGGCATCCGGATAAGAAGGGTTCTGAGTGAGTTAGGTCAAGAGTACTGATCATCAATTCAAATGATGTGTGATAATCAGGCCACCCTAAGTATTGCCAAAAATCCTGTTCATCATGACAGGACGAAACACGTTGAGATTGACCGACACTTCATTTCTGCGAAAGTTAACAGCCAAGTGGTGCAACTTACCTACGTTCCTACCAAGCAACAAGTGGCAGACATCCTCACTAAACCATTACCAAGACCCAACTTCGAAGACTTGAATAGCAAGCTAGGTTTGTATAATATATACAATCCAGCTTGAGGGGGAGTGTTGAAAGTTAGGGTTAGATTTGTAATCTTGTAAATTATATTTATCTAATTCTGGTTTGTGGGTTGTTAGGTAAGTGAGAGTCTATAGGAGAATTGTTATGTTTGTTAGGTAAGTGAGAGTCTATAGGAGAATTGTTATGTTTGTTAGGTAAGTGAGAGTCTATAGGAGAATTGTTATGTTTGTTAGGTAAGTGAGGGTCTATAGGAAAGTTGTTATTTTTGTTTTGATTTTCTTTTGGTGTGTATTTATACGTACGTAATTATGGAATAAAGCAAGAGTTTCTTCACTAGGCTTTTACCATTTCTAGTCCTCCAAACAGTCCACCAAAATGCGTTTAAAAACAGAATCCACAGTTATTTCTTTTCATCCTTGAAGGGAATTGCCCATGTAAGCTTGATAGGACAGGAAACATAAATTTGCCTCCAATCAGATATTCTGGCTTCCTTCTTTATTTCCGTTCATCAATAAAGTAATACAACTTCTTATAGAACAGTAGATAACAGTAAATTCTGTTTTTTACTTGAACAGATCACAGAGATTAGAGACTTTGCAGGCCAAAATGTCGAAATTAAGAAATTTGTAGAACCGGATTCGAAGGAAGCGTACGAGAAGATGAAGGCATCTGCTACTACTTCAGCGGTTGATGCTGTCCTGGAACAAATTAAAAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTCGATAAAGTTTCGTTTCTGCAGCGAGCCGATTATAGGGAGTTCGAACGAGAGAGGGATGCACGGTTGGCTTTGCAGTCCAGGAGGAGGCCGGATATGCGACAGGAGCCATGACCGAGCCATCATCCGAAGCTCTCGATGGAGAATGTTTCCTATTTGTAAGTTTTTAGAATTTCTTGTGCGGATATGAATTATGATGACATGACAAAAACTGGTAGTGATGCTTCCATGTAAATCAGAGAAATTACAGCACTTTGTAGGTTTCTATAATTGGCATCTGCTCCCAAGTCTTTGCCCTATTCTTGTAGCAGTTATCTTTCATTCTTCTGCATTCGTATAAGAGACATTCTAGTTTGGTTAAATGGGTTTCAATTACAATCCGAACTCCAAAATGTCTTATTTCAATGTAGGTGTTTGGATGAGGAATTGGAAAA

mRNA sequence

AACCGGTTCACGGTTTGTTTGTTGTTGTTTTATAGGGTTACAATGTTTCAACCGAACAAGGCTCAAAATACTGTCTTCTTCACTCTTCGACTCCGGCGAACGGAGAACGGAGAACGGCCAGCGACGAGCAAGACAACGGGATTTAAGGGTTCGATTCCGTTTCATTGCCGCGATCTTTCAGGTTCTTCATTGGATTAGATTTTGTGAATGAAATAATAATGGAATCGGCTAAAGAAGAATCTACTCATCTTTGTTCTGAGGAAAAGCTTGGTGACACAGAAACAAAAGCTCGTGTCGATGCCATGTGGGAGAAAATGAATAAAGGGGTGTCTAATAAAACCTTGAAAGTTTTGTCAACCAAACGATCTCCAGCAGGGAACAAAAACTCAAAGAAGTCAAACAATAATTGGATTTCATATCTTGGAATGGCGTCGAAGAAGGTCGAACCTCAAGAAAAAGCTATGTCATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTGCTGATGATGCTAAGCTGCTTGCTGCCACTGCTCTTTCAGCTGTTAGGGACCAAGCTTCAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGAGACTTTGCAGGCCAAAATGTCGAAATTAAGAAATTTGTAGAACCGGATTCGAAGGAAGCGTACGAGAAGATGAAGGCATCTGCTACTACTTCAGCGGTTGATGCTGTCCTGGAACAAATTAAAAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTCGATAAAGTTTCGTTTCTGCAGCGAGCCGATTATAGGGAGTTCGAACGAGAGAGGGATGCACGGTTGGCTTTGCAGTCCAGGAGGAGGCCGGATATGCGACAGGAGCCATGACCGAGCCATCATCCGAAGCTCTCGATGGAGAATGTTTCCTATTTGTAAGTTTTTAGAATTTCTTGTGCGGATATGAATTATGATGACATGACAAAAACTGGTAGTGATGCTTCCATGTAAATCAGAGAAATTACAGCACTTTGTAGGTTTCTATAATTGGCATCTGCTCCCAAGTCTTTGCCCTATTCTTGTAGCAGTTATCTTTCATTCTTCTGCATTCGTATAAGAGACATTCTAGTTTGGTTAAATGGGTTTCAATTACAATCCGAACTCCAAAATGTCTTATTTCAATGTAGGTGTTTGGATGAGGAATTGGAAAA

Coding sequence (CDS)

ATGGAATCGGCTAAAGAAGAATCTACTCATCTTTGTTCTGAGGAAAAGCTTGGTGACACAGAAACAAAAGCTCGTGTCGATGCCATGTGGGAGAAAATGAATAAAGGGGTGTCTAATAAAACCTTGAAAGTTTTGTCAACCAAACGATCTCCAGCAGGGAACAAAAACTCAAAGAAGTCAAACAATAATTGGATTTCATATCTTGGAATGGCGTCGAAGAAGGTCGAACCTCAAGAAAAAGCTATGTCATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTGCTGATGATGCTAAGCTGCTTGCTGCCACTGCTCTTTCAGCTGTTAGGGACCAAGCTTCAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGAGACTTTGCAGGCCAAAATGTCGAAATTAAGAAATTTGTAGAACCGGATTCGAAGGAAGCGTACGAGAAGATGAAGGCATCTGCTACTACTTCAGCGGTTGATGCTGTCCTGGAACAAATTAAAAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTCGATAAAGTTTCGTTTCTGCAGCGAGCCGATTATAGGGAGTTCGAACGAGAGAGGGATGCACGGTTGGCTTTGCAGTCCAGGAGGAGGCCGGATATGCGACAGGAGCCATGA

Protein sequence

MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRPDMRQEP

Homology

[Close]

BLAST of Sed0009947.1 vs. NCBI nr
Match: XP_022959427.1 (craniofacial development protein 1 isoform X2 [Cucurbita moschata] >XP_022959428.1 craniofacial development protein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 5.8e-100
Identity = 212/246 (86.18%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 3   MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 62

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 63  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 122

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKKQKLSVLDK
Sbjct: 123 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKKQKLSVLDK 182

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 183 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 242

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 243 DMREEP 246

[Close]

BLAST of Sed0009947.1 vs. NCBI nr
Match: XP_022959426.1 (craniofacial development protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 5.8e-100
Identity = 212/246 (86.18%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 18  MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 77

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 78  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 137

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKKQKLSVLDK
Sbjct: 138 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKKQKLSVLDK 197

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 198 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 257

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 258 DMREEP 261

[Close]

BLAST of Sed0009947.1 vs. NCBI nr
Match: XP_023547915.1 (craniofacial development protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 211/246 (85.77%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 18  MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 77

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 78  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 137

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A +SAVDA+LEQIKKKQKLSVLDK
Sbjct: 138 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-SSAVDAILEQIKKKQKLSVLDK 197

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 198 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 257

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 258 DMREEP 261

[Close]

BLAST of Sed0009947.1 vs. NCBI nr
Match: XP_023547913.1 (craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547914.1 craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 211/246 (85.77%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 45  MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 104

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 105 SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 164

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A +SAVDA+LEQIKKKQKLSVLDK
Sbjct: 165 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-SSAVDAILEQIKKKQKLSVLDK 224

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 225 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 284

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 285 DMREEP 288

[Close]

BLAST of Sed0009947.1 vs. NCBI nr
Match: XP_023547916.1 (craniofacial development protein 1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 211/246 (85.77%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 3   MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 62

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 63  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 122

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A +SAVDA+LEQIKKKQKLSVLDK
Sbjct: 123 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-SSAVDAILEQIKKKQKLSVLDK 182

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 183 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 242

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 243 DMREEP 246

[Close]

BLAST of Sed0009947.1 vs. ExPASy Swiss-Prot
Match: O88271 (Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 68/205 (33.17%), Postives = 105/205 (51.22%), Query Frame = 0


Query: 54  NKNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSS--ADDAKLLAATALSAVRD 113
           N   KK +  W S+L      V P+ KA     +KV + +   + +  L+ A  L   R+
Sbjct: 100 NARKKKEDELWASFL----NDVGPKSKAAPGSQTKVAEETEEISSNKPLVKADELDKPRE 159

Query: 114 QASATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA--------YEKMKASATT---- 173
                     KV+IT++ DFAG+ V + K V+  SKEA         EK +A  T+    
Sbjct: 160 SE--------KVKITKVFDFAGEEVRVTKEVDAASKEAKSFLKQTEREKPQALVTSPATP 219

Query: 174 ----------SAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQ 233
                     S + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    
Sbjct: 220 LPAGSGIKRASGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEG 279

[Close]

BLAST of Sed0009947.1 vs. ExPASy Swiss-Prot
Match: Q75UQ2 (Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 68/201 (33.83%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 58  KKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNS--SADDAKLLAATALSAVRDQASA 117
           KK +  W S+L      V  + KA SS   KV + +  ++    L+ A  L   ++    
Sbjct: 104 KKEDELWASFL----NDVGTKSKAASSSQVKVAEETEETSSSKPLVKADELEKPKESE-- 163

Query: 118 TISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA--------YEKMKASAT--------- 177
                 KV+IT++ DFAG+ V + K V+  SKEA         EK +A  T         
Sbjct: 164 ------KVKITKVFDFAGEEVRVTKEVDATSKEAKSFLKQTEKEKPQALVTSAATPPPAG 223

Query: 178 -----TSAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDK 234
                TS + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    Y+++
Sbjct: 224 SGIKRTSGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEGYIER 283

[Close]

BLAST of Sed0009947.1 vs. ExPASy Swiss-Prot
Match: Q75QI0 (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.0e-12
Identity = 66/204 (32.35%), Postives = 106/204 (51.96%), Query Frame = 0


Query: 55  KNSKKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQAS 114
           +  KK +  W S+L    +K +          +   Q + AD A  + +      + + S
Sbjct: 101 EEKKKEDALWASFLSDVGQKPK----------AAATQATHADKAGEVKSVNKLQGKPKES 160

Query: 115 ATISGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA------YEKMKASA----------- 174
                 G+V IT++ DFAG+ V + K V+  SKEA       EK ++SA           
Sbjct: 161 EKPKDSGRVTITKVFDFAGEEVRVTKEVDSSSKEAKSFLKQQEKWQSSAPGSLPTVSGVK 220

Query: 175 TTSAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFL 234
             S + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +  + Y+++ +FL
Sbjct: 221 RPSGISSLLGKIGSKKQKMSTLEKSKLDWENFKEE-EGIVEELAIHNRGKDGYIERKAFL 280

Query: 235 QRADYREFERERDARLALQSRRRP 241
           +R D+R+FE ERD RL   SR +P
Sbjct: 281 ERVDHRQFEIERDIRL---SRMKP 290

[Close]

BLAST of Sed0009947.1 vs. ExPASy Swiss-Prot
Match: Q9UEE9 (Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 65/199 (32.66%), Postives = 100/199 (50.25%), Query Frame = 0


Query: 58  KKSNNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATI 117
           KK +  W S+L     K +        +G +  + SS   +KLL       V+ +     
Sbjct: 108 KKEDELWASFLNDVGPKSKVPPSTQVKKGEETEETSS---SKLL-------VKAEELEKP 167

Query: 118 SGRGKVEITEIRDFAGQNVEIKKFVEPDSKEA------YEKMKASAT------------- 177
               KV+IT++ DFAG+ V + K V+  SKEA       EK K  A              
Sbjct: 168 KETEKVKITKVFDFAGEEVRVTKEVDATSKEAKSFFKQNEKEKPQANVPSALPSLPAGSG 227

Query: 178 ---TSAVDAVLEQI-KKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVS 234
              +S + ++L +I  KKQK+S L+K+K DW  FKEE +G+ E+L  + +    Y+++ +
Sbjct: 228 LKRSSGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEE-EGIGEELAIHNRGKEGYIERKA 287

[Close]

BLAST of Sed0009947.1 vs. ExPASy Swiss-Prot
Match: Q60FC2 (Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.9e-11
Identity = 66/236 (27.97%), Postives = 107/236 (45.34%), Query Frame = 0


Query: 21  ETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYLGMASKKVEPQEK 80
           E +   DA  E    G   +       + + + +   KK +  W S+L     K +    
Sbjct: 71  EEEDEEDAGRESGGSGSEEEDTATEQEEGTESEDARKKKEDELWASFLNDVGPKSKVPPS 130

Query: 81  AMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGRGKVEITEIRDFAGQNVEIKK 140
                G +  + SS+           + V+ +         KV+IT++ DFAG+ V + K
Sbjct: 131 TPVKTGEETEETSSS-----------NLVKAEEQEKPKETEKVKITKVFDFAGEEVRVTK 190

Query: 141 FVEPDSKEAYEKMKAS----------------------ATTSAVDAVLEQI-KKKQKLSV 200
            V+P SKEA    K S                        +S + ++L +I  KKQK+S 
Sbjct: 191 EVDPTSKEAKSFFKQSEKEKPQPNVPSAVSSLPAGSGLKRSSGMSSLLGKIGAKKQKMST 250

Query: 201 LDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLA 234
           L+K+K DW  FKEE +G+ E+L  + +    Y+++ +FL R D+R+FE ERD RL+
Sbjct: 251 LEKSKLDWENFKEE-EGIAEELAIHNRGKEGYIERKAFLDRVDHRQFEIERDLRLS 294

[Close]

BLAST of Sed0009947.1 vs. ExPASy TrEMBL
Match: A0A6J1H5W9 (craniofacial development protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.8e-100
Identity = 212/246 (86.18%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 3   MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 62

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 63  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 122

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKKQKLSVLDK
Sbjct: 123 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKKQKLSVLDK 182

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 183 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 242

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 243 DMREEP 246

[Close]

BLAST of Sed0009947.1 vs. ExPASy TrEMBL
Match: A0A6J1H4U3 (craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.8e-100
Identity = 212/246 (86.18%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARVDAMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 18  MESAKEGSGHMSSEGKPNDTEIKARVDAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 77

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 78  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 137

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKKQKLSVLDK
Sbjct: 138 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKKQKLSVLDK 197

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 198 TKKDWGEFKEETKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 257

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 258 DMREEP 261

[Close]

BLAST of Sed0009947.1 vs. ExPASy TrEMBL
Match: A0A6J1L2Q7 (craniofacial development protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.9e-99
Identity = 209/246 (84.96%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARV+AMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 19  MESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 78

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 79  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 138

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKKQKLSVLDK
Sbjct: 139 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKKQKLSVLDK 198

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 199 TKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 258

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 259 DMREEP 262

[Close]

BLAST of Sed0009947.1 vs. ExPASy TrEMBL
Match: A0A6J1KWE6 (craniofacial development protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.9e-99
Identity = 209/246 (84.96%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARV+AMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 3   MESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 62

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 63  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 122

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKKQKLSVLDK
Sbjct: 123 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKKQKLSVLDK 182

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 183 TKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 242

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 243 DMREEP 246

[Close]

BLAST of Sed0009947.1 vs. ExPASy TrEMBL
Match: A0A6J1KYB0 (craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.9e-99
Identity = 209/246 (84.96%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MESAKEESTHLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKS 60
           MESAKE S H+ SE K  DTE KARV+AMWE+MNKGVS+KTLK LSTKRSP  NKNSKK 
Sbjct: 18  MESAKEGSGHMSSEGKPNDTEIKARVNAMWEQMNKGVSSKTLKGLSTKRSPVVNKNSKKP 77

Query: 61  NNNWISYLGMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQASATISGR 120
           +NNWI+YLGMASKK+EPQEK   SEG KVLQ+SS DDAK+LAATALSAVRD A+ATISGR
Sbjct: 78  SNNWIAYLGMASKKIEPQEKDTLSEGPKVLQDSSMDDAKMLAATALSAVRD-ATATISGR 137

Query: 121 GKVEITEIRDFAGQNVEIKKFVEPDSKEAYEKMKASATTSAVDAVLEQIKKKQKLSVLDK 180
           GKVEITEIRDFAGQNVEIKKFV+ DSKEAYEKMKA A TSAVDA+LEQIKKKQKLSVLDK
Sbjct: 138 GKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPA-TSAVDAILEQIKKKQKLSVLDK 197

Query: 181 TKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRP 240
           TKKDWGEFKEE KGLEEDL++YKKSSNQYLDKVSFLQRADYREFERERDARLALQ+RRRP
Sbjct: 198 TKKDWGEFKEETKGLEEDLESYKKSSNQYLDKVSFLQRADYREFERERDARLALQARRRP 257

Query: 241 DMRQEP 247
           DMR+EP
Sbjct: 258 DMREEP 261

[Close]

BLAST of Sed0009947.1 vs. TAIR 10
Match: AT5G30490.1 (CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). )

HSP 1 Score: 221.9 bits (564), Expect = 5.8e-58
Identity = 134/240 (55.83%), Postives = 175/240 (72.92%), Query Frame = 0


Query: 9   THLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYL 68
           +H  S E  G +    +V  +W++MN+GV NK +  +ST   PA N     +N+NW SYL
Sbjct: 3   SHEQSPENNGSSTVSKKVADIWQRMNEGVPNKRVNFVST-ALPAKN----SANSNWKSYL 62

Query: 69  GMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ--ASATISGRGKVEIT 128
           G+  KK   ++  +S     VL +S +++AK +AA AL+AVR+    +A  S RGK+EIT
Sbjct: 63  GVNVKK---KDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTAAAASSRGKIEIT 122

Query: 129 EIRDFAGQNVEIKKFVEPDSKEAYEK-----MKASATTSAVDAVLEQIKKKQKLSVLDKT 188
           E++DFAGQ +E+K+ VE DSKEA E+       +SA  SAVDAVLEQIKKKQKLSVLDKT
Sbjct: 123 EVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQKLSVLDKT 182

Query: 189 KKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRPD 242
           KKDWGE+KEE+KG+E++LD YKKSS+QYLDKV FL+RADYR+FE+ERDARLALQS+RR D
Sbjct: 183 KKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLALQSKRRHD 234

[Close]

BLAST of Sed0009947.1 vs. TAIR 10
Match: AT5G30490.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). )

HSP 1 Score: 221.9 bits (564), Expect = 5.8e-58
Identity = 134/240 (55.83%), Postives = 175/240 (72.92%), Query Frame = 0


Query: 9   THLCSEEKLGDTETKARVDAMWEKMNKGVSNKTLKVLSTKRSPAGNKNSKKSNNNWISYL 68
           +H  S E  G +    +V  +W++MN+GV NK +  +ST   PA N     +N+NW SYL
Sbjct: 3   SHEQSPENNGSSTVSKKVADIWQRMNEGVPNKRVNFVST-ALPAKN----SANSNWKSYL 62

Query: 69  GMASKKVEPQEKAMSSEGSKVLQNSSADDAKLLAATALSAVRDQ--ASATISGRGKVEIT 128
           G+  KK   ++  +S     VL +S +++AK +AA AL+AVR+    +A  S RGK+EIT
Sbjct: 63  GVNVKK---KDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTAAAASSRGKIEIT 122

Query: 129 EIRDFAGQNVEIKKFVEPDSKEAYEK-----MKASATTSAVDAVLEQIKKKQKLSVLDKT 188
           E++DFAGQ +E+K+ VE DSKEA E+       +SA  SAVDAVLEQIKKKQKLSVLDKT
Sbjct: 123 EVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQKLSVLDKT 182

Query: 189 KKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRADYREFERERDARLALQSRRRPD 242
           KKDWGE+KEE+KG+E++LD YKKSS+QYLDKV FL+RADYR+FE+ERDARLALQS+RR D
Sbjct: 183 KKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLALQSKRRHD 234

The following BLAST results are available for this feature:

BLAST of Sed0009947.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959427.1	5.8e-100	86.18	craniofacial development protein 1 isoform X2 [Cucurbita moschata] >XP_022959428...	[more]
XP_022959426.1	5.8e-100	86.18	craniofacial development protein 1 isoform X1 [Cucurbita moschata]	[more]
XP_023547915.1	1.7e-99	85.77	craniofacial development protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023547913.1	1.7e-99	85.77	craniofacial development protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] ...	[more]
XP_023547916.1	1.7e-99	85.77	craniofacial development protein 1-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0009947.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O88271	2.8e-12	33.17	Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1	[more]
Q75UQ2	2.8e-12	33.83	Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 S...	[more]
Q75QI0	8.0e-12	32.35	Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1	[more]
Q9UEE9	1.4e-11	32.66	Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1	[more]
Q60FC2	8.9e-11	27.97	Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 S...	[more]

BLAST of Sed0009947.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5W9	2.8e-100	86.18	craniofacial development protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1H4U3	2.8e-100	86.18	craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1L2Q7	6.9e-99	84.96	craniofacial development protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1KWE6	6.9e-99	84.96	craniofacial development protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1KYB0	6.9e-99	84.96	craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Sed0009947.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G30490.1	5.8e-58	55.83	CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterP...	[more]
AT5G30490.2	5.8e-58	55.83	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..63
None	No IPR available	PANTHER	PTHR23227:SF45	SWR1-COMPLEX PROTEIN 5	coord: 13..245
IPR011421	BCNT-C domain	PFAM	PF07572	BCNT	coord: 160..233 e-value: 4.5E-24 score: 84.3
IPR011421	BCNT-C domain	PROSITE	PS51279	BCNT_C	coord: 156..237 score: 19.827114
IPR027124	SWR1-complex protein 5/Craniofacial development protein 1/2	PANTHER	PTHR23227	BUCENTAUR RELATED	coord: 13..245

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009947	Sed0009947	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.1-five_prime_utr	Sed0009947.1-five_prime_utr-LG09:7779857..7780054	five_prime_UTR
Sed0009947.1-five_prime_utr	Sed0009947.1-five_prime_utr-LG09:7782056..7782075	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.1-exon	Sed0009947.1-exon-LG09:7779857..7780054	exon
Sed0009947.1-exon	Sed0009947.1-exon-LG09:7782056..7782136	exon
Sed0009947.1-exon	Sed0009947.1-exon-LG09:7782276..7782400	exon
Sed0009947.1-exon	Sed0009947.1-exon-LG09:7782500..7782685	exon
Sed0009947.1-exon	Sed0009947.1-exon-LG09:7789138..7789826	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.1-cds	Sed0009947.1-cds-LG09:7782076..7782136	CDS
Sed0009947.1-cds	Sed0009947.1-cds-LG09:7782276..7782400	CDS
Sed0009947.1-cds	Sed0009947.1-cds-LG09:7782500..7782685	CDS
Sed0009947.1-cds	Sed0009947.1-cds-LG09:7789138..7789506	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009947.1-three_prime_utr	Sed0009947.1-three_prime_utr-LG09:7789507..7789826	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009947.1	Sed0009947.1-protein	polypeptide