Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGCATTCAAAGCCAATCAGTAATGGAGAAAAAATATACATAAAAAAAGGGCAAAAAATTCCTTTCACTGCGATTCCACACGCTTCTGCCTAACCCACCCATGTGAGCTATCATCCAAGCAAGCCAACCCACTTCCTTCCAAATTTCACATATAAATTCTCTTCTTCTTAACCCTTCCTTTCTCTTATTTTAATCCCTGTGGTTTTCGTTTCTTCTTCATCTTTTGGATGCTTTCTTCCTGAAATTAATATATTTTGGAATTTTGTCCGCATCTGTTGATTCATTGTGGCTGCTCCATCCTGCATTCTTTTGGCTTTTTTAAAAGGTATCTTCCTTTTCCCCTACGCGTTATTCTCTCTGGAACAGCTTGCTCGAATTTCCATTGCGTTTGTTTCAGGCTACAATGTGCTCATTCCATTACAGTTTCTGAACTTCTGTTCTGTTGGTTTCTTGAGGCTGTGTTTGGTTATAGTGCTGAATTTGGGGGTTTCATCATTTGCTTATTCTGTTTGGTTTCTGGGGTTTTAGATTCTGGATTTCTGTTCCCCCTTTTGGAAAAAAAAAGGGGTGTTTTTGAGATTTGGGGTTTTGGTAGTTAATGGTGGGGATGTGAGATTCTTTCCCAATTTAGAGGACATGGCTTCTTTCAGTGGATTGGGAATTGGGTTGAGTTTGGTTTTTGGGTGTCTTTTATTTGCTCTTGTTGTAGAGCTTTACTATTTGTTATGGTGGAAGAATAGGAGCTTTGCTTCACATGTTGAAGAGGATGAATTCACCAATTATGCTAAGGAATTCTTCCATCTCATTTGTTGGAAAAGGGGTTCCTCTTCCACTTCTCTTCAACCCAACAATTCCCAAATGAATCCAGAAACCAGGACTCAAGAATCTGACATTGAAATTGGTGCTACCAAGGATTTGTTGTTGAAGTCATCTGGAGGAGAAGAGGGAGTTGAGTTAGAGCTGATGAGGCTGCATAATCTTGCAGGTCCACCAAGGTTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAGTCTGAAGATAGAAGCAGAAAGGGATCAAGAACCTTAAGTGATCTTATTTTAGCTGTTGACACTCCATTACTCACTCCTTTGCCCTCACCTCCATTGAAATCACCCTCTCCTTTAAACCCCTTGAGTTCTTTCAAACACTATGGATTCAATATAAACCCTCTCTTTGAATCATCAACAGATTTAGATTTGAACAGGCTCTTGTCTTCACCTCCCCCAAAGTTTAGGTTCCTAAGGGAGGCAGAAGAGAAACTGTACAGGAGATTGATGGAAGAATCTCAGAAAAAGGCCTGTAAAAATGGTGGGTCAGTTCAGAATTCTGAAACTCAAGCCATTTCCATGCCTACATCAGAAGTTGAAGAAGAAAAGGAAGATGGGTTTTGTTGTACAAAAGAGAAAGAGCCTCAAAATCACTATGTCTCATAGTATTCTTCAAGTTCTTCACAGGTTCTTCCTTTAGCTTCTCCTCCTCTTTCTGGGCATAGATTTAATATGTTTCATTATAAGAAGATAGGTTTATGATTCAATTTTATCTTTCTTTCAGCTTTTGAGTTGATTTGCATTATGTATCAAAATGCAAACAACTTTCTCACTTTGGTTTGATTCAATGAATTAATTGATTAACCTTTTTGTTTCCCCTTTCTTTTCCAATACCACGTTTGGTGAGATTAGATTGAAATGACTCTTGCATTGTTGAAATTTTTGGGAATCTTACACTCTTTCAAAAGTGGGCTAAGGCCAATTATTAGATTGTCTTCATGAACA
mRNA sequence
TTTGCATTCAAAGCCAATCAGTAATGGAGAAAAAATATACATAAAAAAAGGGCAAAAAATTCCTTTCACTGCGATTCCACACGCTTCTGCCTAACCCACCCATGTGAGCTATCATCCAAGCAAGCCAACCCACTTCCTTCCAAATTTCACATATAAATTCTCTTCTTCTTAACCCTTCCTTTCTCTTATTTTAATCCCTGTGGTTTTCGTTTCTTCTTCATCTTTTGGATGCTTTCTTCCTGAAATTAATATATTTTGGAATTTTGTCCGCATCTGTTGATTCATTGTGGCTGCTCCATCCTGCATTCTTTTGGCTTTTTTAAAAGGTATCTTCCTTTTCCCCTACGCGTTATTCTCTCTGGAACAGCTTGCTCGAATTTCCATTGCGTTTGTTTCAGGCTACAATGTGCTCATTCCATTACAGTTTCTGAACTTCTGTTCTGTTGGTTTCTTGAGGCTGTGTTTGGTTATAGTGCTGAATTTGGGGGTTTCATCATTTGCTTATTCTGTTTGGTTTCTGGGGTTTTAGATTCTGGATTTCTGTTCCCCCTTTTGGAAAAAAAAAGGGGTGTTTTTGAGATTTGGGGTTTTGGTAGTTAATGGTGGGGATGTGAGATTCTTTCCCAATTTAGAGGACATGGCTTCTTTCAGTGGATTGGGAATTGGGTTGAGTTTGGTTTTTGGGTGTCTTTTATTTGCTCTTGTTGTAGAGCTTTACTATTTGTTATGGTGGAAGAATAGGAGCTTTGCTTCACATGTTGAAGAGGATGAATTCACCAATTATGCTAAGGAATTCTTCCATCTCATTTGTTGGAAAAGGGGTTCCTCTTCCACTTCTCTTCAACCCAACAATTCCCAAATGAATCCAGAAACCAGGACTCAAGAATCTGACATTGAAATTGGTGCTACCAAGGATTTGTTGTTGAAGTCATCTGGAGGAGAAGAGGGAGTTGAGTTAGAGCTGATGAGGCTGCATAATCTTGCAGGTCCACCAAGGTTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAGTCTGAAGATAGAAGCAGAAAGGGATCAAGAACCTTAAGTGATCTTATTTTAGCTGTTGACACTCCATTACTCACTCCTTTGCCCTCACCTCCATTGAAATCACCCTCTCCTTTAAACCCCTTGAGTTCTTTCAAACACTATGGATTCAATATAAACCCTCTCTTTGAATCATCAACAGATTTAGATTTGAACAGGCTCTTGTCTTCACCTCCCCCAAAGTTTAGGTTCCTAAGGGAGGCAGAAGAGAAACTGTACAGGAGATTGATGGAAGAATCTCAGAAAAAGGCCTGTAAAAATGGTGGGTCAGTTCAGAATTCTGAAACTCAAGCCATTTCCATGCCTACATCAGAAGTTGAAGAAGAAAAGGAAGATGGGTTTTGTTGTACAAAAGAGAAAGAGCCTCAAAATCACTATGTCTCATAGTATTCTTCAAGTTCTTCACAGGTTCTTCCTTTAGCTTCTCCTCCTCTTTCTGGGCATAGATTTAATATGTTTCATTATAAGAAGATAGGTTTATGATTCAATTTTATCTTTCTTTCAGCTTTTGAGTTGATTTGCATTATGTATCAAAATGCAAACAACTTTCTCACTTTGGTTTGATTCAATGAATTAATTGATTAACCTTTTTGTTTCCCCTTTCTTTTCCAATACCACGTTTGGTGAGATTAGATTGAAATGACTCTTGCATTGTTGAAATTTTTGGGAATCTTACACTCTTTCAAAAGTGGGCTAAGGCCAATTATTAGATTGTCTTCATGAACA
Coding sequence (CDS)
ATGGCTTCTTTCAGTGGATTGGGAATTGGGTTGAGTTTGGTTTTTGGGTGTCTTTTATTTGCTCTTGTTGTAGAGCTTTACTATTTGTTATGGTGGAAGAATAGGAGCTTTGCTTCACATGTTGAAGAGGATGAATTCACCAATTATGCTAAGGAATTCTTCCATCTCATTTGTTGGAAAAGGGGTTCCTCTTCCACTTCTCTTCAACCCAACAATTCCCAAATGAATCCAGAAACCAGGACTCAAGAATCTGACATTGAAATTGGTGCTACCAAGGATTTGTTGTTGAAGTCATCTGGAGGAGAAGAGGGAGTTGAGTTAGAGCTGATGAGGCTGCATAATCTTGCAGGTCCACCAAGGTTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAGTCTGAAGATAGAAGCAGAAAGGGATCAAGAACCTTAAGTGATCTTATTTTAGCTGTTGACACTCCATTACTCACTCCTTTGCCCTCACCTCCATTGAAATCACCCTCTCCTTTAAACCCCTTGAGTTCTTTCAAACACTATGGATTCAATATAAACCCTCTCTTTGAATCATCAACAGATTTAGATTTGAACAGGCTCTTGTCTTCACCTCCCCCAAAGTTTAGGTTCCTAAGGGAGGCAGAAGAGAAACTGTACAGGAGATTGATGGAAGAATCTCAGAAAAAGGCCTGTAAAAATGGTGGGTCAGTTCAGAATTCTGAAACTCAAGCCATTTCCATGCCTACATCAGAAGTTGAAGAAGAAAAGGAAGATGGGTTTTGTTGTACAAAAGAGAAAGAGCCTCAAAATCACTATGTCTCATAG
Protein sequence
MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWKRGSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTLSDLILAVDTPLLTPLPSPPLKSPSPLNPLSSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSVQNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS
Homology
BLAST of Sed0006133.1 vs. NCBI nr
Match:
XP_038902956.1 (uncharacterized protein LOC120089527 [Benincasa hispida])
HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 237/279 (84.95%), Postives = 249/279 (89.25%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFTNYAKEFFHLICW
Sbjct: 1 MTSFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSQV-EDEFTNYAKEFFHLICWN 60
Query: 61 RGSSSTSLQPNN---SQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAG 120
S+SLQPNN +Q N E RTQESDIEIG KDLLLKSSGGE+GVELELMRLHNLAG
Sbjct: 61 WKRGSSSLQPNNFRENQRNLEVRTQESDIEIGCRKDLLLKSSGGEDGVELELMRLHNLAG 120
Query: 121 PPRFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPL 180
PPRFLFTIKEETKEDLESEDRSRKGSRT LSDLIL VDTP LTPLPSPPLK+ SPLNPL
Sbjct: 121 PPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTVDTPFLTPLPSPPLKATSPLNPL 180
Query: 181 SSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGG 240
SSFKH+GFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEE+QKKAC NGG
Sbjct: 181 SSFKHHGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEEAQKKACNNGG 240
Query: 241 SVQNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
SVQN ET+AIS P + VEEE+EDGFCCTKE+EP+NH+ S
Sbjct: 241 SVQNYETKAISNPKAAVEEEEEDGFCCTKEREPENHHAS 278
BLAST of Sed0006133.1 vs. NCBI nr
Match:
XP_022947973.1 (uncharacterized protein LOC111451693 [Cucurbita moschata])
HSP 1 Score: 436.0 bits (1120), Expect = 2.3e-118
Identity = 229/277 (82.67%), Postives = 245/277 (88.45%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1 MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60
Query: 61 R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
R SSS+S+Q NNS NPE R+QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61 RSSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120
Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
RFLFTIKEETKEDLESEDRSRKGSRT LSDLILA+DTP LTPLPSPP PS PLSS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PLSS 180
Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240
Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
QN ETQ IS P + E+E++D CCTKEKE QNHYVS
Sbjct: 241 QNPETQPISNPIAAAEDEEDDEVCCTKEKELQNHYVS 273
BLAST of Sed0006133.1 vs. NCBI nr
Match:
XP_023532268.1 (uncharacterized protein LOC111794467 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 435.3 bits (1118), Expect = 4.0e-118
Identity = 229/277 (82.67%), Postives = 244/277 (88.09%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1 MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60
Query: 61 R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
R SSS+S+Q NNS NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61 RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120
Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
RFLFTIKEETKEDLESEDRSRKGSRT LSDLILA+DTP LTPLPSPP PS PLSS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PLSS 180
Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240
Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
QN ET AIS P + E+E++D CCTKEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEVCCTKEKELQNHYVS 273
BLAST of Sed0006133.1 vs. NCBI nr
Match:
XP_023007067.1 (uncharacterized protein LOC111499670 isoform X2 [Cucurbita maxima])
HSP 1 Score: 434.1 bits (1115), Expect = 8.9e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1 MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60
Query: 61 R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
R SSS+S+Q NNS NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61 RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120
Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
RFLFTIKEETKEDLESEDRSRKGSRT LSDLILA+DTP LTPLPSPP PS P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180
Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240
Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
QN ET AIS P + E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273
BLAST of Sed0006133.1 vs. NCBI nr
Match:
XP_023007066.1 (uncharacterized protein LOC111499670 isoform X1 [Cucurbita maxima])
HSP 1 Score: 434.1 bits (1115), Expect = 8.9e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1 MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60
Query: 61 R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
R SSS+S+Q NNS NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61 RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120
Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
RFLFTIKEETKEDLESEDRSRKGSRT LSDLILA+DTP LTPLPSPP PS P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180
Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240
Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
QN ET AIS P + E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273
BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match:
A0A6J1G835 (uncharacterized protein LOC111451693 OS=Cucurbita moschata OX=3662 GN=LOC111451693 PE=4 SV=1)
HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 229/277 (82.67%), Postives = 245/277 (88.45%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1 MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60
Query: 61 R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
R SSS+S+Q NNS NPE R+QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61 RSSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120
Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
RFLFTIKEETKEDLESEDRSRKGSRT LSDLILA+DTP LTPLPSPP PS PLSS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PLSS 180
Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240
Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
QN ETQ IS P + E+E++D CCTKEKE QNHYVS
Sbjct: 241 QNPETQPISNPIAAAEDEEDDEVCCTKEKELQNHYVS 273
BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match:
A0A6J1KZH4 (uncharacterized protein LOC111499670 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499670 PE=4 SV=1)
HSP 1 Score: 434.1 bits (1115), Expect = 4.3e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1 MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60
Query: 61 R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
R SSS+S+Q NNS NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61 RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120
Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
RFLFTIKEETKEDLESEDRSRKGSRT LSDLILA+DTP LTPLPSPP PS P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180
Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240
Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
QN ET AIS P + E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273
BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match:
A0A6J1KXJ9 (uncharacterized protein LOC111499670 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499670 PE=4 SV=1)
HSP 1 Score: 434.1 bits (1115), Expect = 4.3e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1 MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60
Query: 61 R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
R SSS+S+Q NNS NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61 RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120
Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
RFLFTIKEETKEDLESEDRSRKGSRT LSDLILA+DTP LTPLPSPP PS P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180
Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240
Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
QN ET AIS P + E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273
BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match:
A0A6J1D323 (uncharacterized protein LOC111017117 OS=Momordica charantia OX=3673 GN=LOC111017117 PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 4.8e-117
Identity = 225/282 (79.79%), Postives = 251/282 (89.01%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
+ASFSGLGIGLSLVFGCLLFALV ELYYLLWWK SF+S VE+DEFTNYAKEFFHLICW+
Sbjct: 2 VASFSGLGIGLSLVFGCLLFALVAELYYLLWWKKSSFSSEVEDDEFTNYAKEFFHLICWE 61
Query: 61 RG-SSSTSLQPNNS---QMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLA 120
R +SS+SLQPNNS + NP+ R QE D+EIG++KDLLLKSSGGE+GVE+ELMRLHNLA
Sbjct: 62 RAPASSSSLQPNNSRPNETNPQLRNQEPDMEIGSSKDLLLKSSGGEDGVEVELMRLHNLA 121
Query: 121 GPPRFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNP 180
GPPRFLFTIKEETKEDLESEDRSRKGSRT LSDLIL DTP LTPLPSPPLK+PSPLNP
Sbjct: 122 GPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTADTPFLTPLPSPPLKAPSPLNP 181
Query: 181 LSSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACK-- 240
S+KH+GFNINPLFESST+L+LNRLLSSPPPKFRFLREAEEKLYRRLMEE+QKKA +
Sbjct: 182 FGSYKHHGFNINPLFESSTELELNRLLSSPPPKFRFLREAEEKLYRRLMEETQKKASRSN 241
Query: 241 NGGSVQNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
N GS QNSET+AIS P + EEE E+GFC T+EKEPQNH++S
Sbjct: 242 NDGSAQNSETKAISKPKTAAEEE-EEGFCFTEEKEPQNHHMS 282
BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match:
A0A5A7V7S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00610 PE=4 SV=1)
HSP 1 Score: 386.3 bits (991), Expect = 1.0e-103
Identity = 213/267 (79.78%), Postives = 228/267 (85.39%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLIC-- 60
M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RS S EDEFTNYAKEFFHLIC
Sbjct: 1 MTSFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSITSSQAEDEFTNYAKEFFHLICWD 60
Query: 61 WKRGSSSTS--LQPNNS---QMNPETRTQESDIEIGATKDLLLKSSGGEE-GVELELMRL 120
WK+GSSS+S QPNNS Q N E R QESDIEIG +KDLLLKSSGGE+ GVELELMRL
Sbjct: 61 WKKGSSSSSSLQQPNNSRENQRNLELRNQESDIEIGCSKDLLLKSSGGEDGGVELELMRL 120
Query: 121 HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLK-SP 180
HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRT LSDLIL VDTP LTPLPSPP K +
Sbjct: 121 HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTVDTPFLTPLPSPPFKPTT 180
Query: 181 SPLNPLSSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKK 240
SPLNPL+SFKH+GFNINPLFESS DLDL+RLLSSPPPKF+FLREAEEKLYR+LMEE+Q K
Sbjct: 181 SPLNPLNSFKHHGFNINPLFESSNDLDLSRLLSSPPPKFKFLREAEEKLYRKLMEEAQNK 240
Query: 241 ACKNGGSVQNSETQAISMPTSEVEEEK 257
KN GSVQ+SE +AIS+P V EE+
Sbjct: 241 HNKNAGSVQSSEIRAISIPKEAVREEE 267
BLAST of Sed0006133.1 vs. TAIR 10
Match:
AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 166.8 bits (421), Expect = 2.5e-41
Identity = 119/249 (47.79%), Postives = 149/249 (59.84%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWK--------NRSFASHVEEDEFTNYAKE 60
M + SGLGIGLSL+FG LL ALV E+YYLL K S EE + YAKE
Sbjct: 1 MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60
Query: 61 FFHLICWKRGSSSTSLQPNNSQMNPETRTQES---DIEIGATKDLLLKSSGGEEGVELEL 120
L C+K+ SLQ NN E E D+E+G K L +GG+ G E EL
Sbjct: 61 LIQLFCFKK---PQSLQQNNGGREGEVSMNEDGNPDLELGLMKHL----NGGDLGFEAEL 120
Query: 121 MRLHNLAGPPRFLFTIKEETKEDLESED--RSRKGS----RTLSDLILAVDTPLLTPLPS 180
M+LHN RFLFTI EETK DLESED +SR GS R+LSD+ +TP TPL S
Sbjct: 121 MKLHN----QRFLFTIMEETKADLESEDGGKSRLGSRSRRRSLSDVPNDCNTPGFTPLAS 180
Query: 181 PPLKSPSPLNPLSSFKHYGFNINPLFESSTDLDLNRLL---SSPPPKFRFLREAEEKLYR 230
P S +PL S+ H+GF NPLFES +L+ N+ SSPPPKF+F+R+AEEKL +
Sbjct: 181 PKKSS----SPLESYPHHGF--NPLFESDGELEFNKFFRSSSSPPPKFKFMRDAEEKLRK 232
BLAST of Sed0006133.1 vs. TAIR 10
Match:
AT2G39560.1 (Putative membrane lipoprotein )
HSP 1 Score: 119.4 bits (298), Expect = 4.5e-27
Identity = 94/250 (37.60%), Postives = 129/250 (51.60%), Query Frame = 0
Query: 1 MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVE--EDEFTNYAKEFFHLIC 60
M S S +G+ LS+VFGCLL AL+ ELYYLLW K RS + D T +E + C
Sbjct: 1 MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKRSTTRRPDFRNDYSTPGTRELLFIFC 60
Query: 61 WKRGSSSTSLQPNNSQM-NPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAG 120
++ +S P++S NP+ + + G E N+ G
Sbjct: 61 CSSSTNPSSSSPSSSSFSNPKPIDTQQQCPL-------------NNGFE-------NVGG 120
Query: 121 P---PRFLFTIKEETKEDLESEDRSRKGSRTLSDLILAVDT-----PLLTPLPSPPLKSP 180
P PRFLFTI EET E++ESED ++L+DL L +++ P LTP SP L +P
Sbjct: 121 PGLVPRFLFTIMEETVEEMESEDVVSTKGKSLNDLFLNMESGVITPPYLTPRASPSLFTP 180
Query: 181 SPLNPL--SSFKHYGFNINPLFESSTDLDLNRLL------------SSPPPKFRFLREAE 226
PL PL S I+ LFESS+D + NRL+ SSP +F+FLR+AE
Sbjct: 181 -PLTPLLMESCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKFLRDAE 229
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038902956.1 | 1.4e-123 | 84.95 | uncharacterized protein LOC120089527 [Benincasa hispida] | [more] |
XP_022947973.1 | 2.3e-118 | 82.67 | uncharacterized protein LOC111451693 [Cucurbita moschata] | [more] |
XP_023532268.1 | 4.0e-118 | 82.67 | uncharacterized protein LOC111794467 [Cucurbita pepo subsp. pepo] | [more] |
XP_023007067.1 | 8.9e-118 | 82.31 | uncharacterized protein LOC111499670 isoform X2 [Cucurbita maxima] | [more] |
XP_023007066.1 | 8.9e-118 | 82.31 | uncharacterized protein LOC111499670 isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1G835 | 1.1e-118 | 82.67 | uncharacterized protein LOC111451693 OS=Cucurbita moschata OX=3662 GN=LOC1114516... | [more] |
A0A6J1KZH4 | 4.3e-118 | 82.31 | uncharacterized protein LOC111499670 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1KXJ9 | 4.3e-118 | 82.31 | uncharacterized protein LOC111499670 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1D323 | 4.8e-117 | 79.79 | uncharacterized protein LOC111017117 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A5A7V7S7 | 1.0e-103 | 79.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT5G59350.1 | 2.5e-41 | 47.79 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT2G39560.1 | 4.5e-27 | 37.60 | Putative membrane lipoprotein | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Sed0006133 | Sed0006133 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0006133.1-exon | Sed0006133.1-exon-LG01:6435980..6437780 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0006133.1-three_prime_utr | Sed0006133.1-three_prime_utr-LG01:6435980..6436318 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0006133.1-cds | Sed0006133.1-cds-LG01:6436319..6437143 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0006133.1-five_prime_utr | Sed0006133.1-five_prime_utr-LG01:6437144..6437780 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Sed0006133.1 | Sed0006133.1-protein | polypeptide |