Sed0006133.1 (mRNA) Chayote v1

Overview


Name	Sed0006133.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG01: 6435980 .. 6437780 (-)
Sequence length	1801
RNA-Seq Expression	Sed0006133.1
Synteny	Sed0006133.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCATTCAAAGCCAATCAGTAATGGAGAAAAAATATACATAAAAAAAGGGCAAAAAATTCCTTTCACTGCGATTCCACACGCTTCTGCCTAACCCACCCATGTGAGCTATCATCCAAGCAAGCCAACCCACTTCCTTCCAAATTTCACATATAAATTCTCTTCTTCTTAACCCTTCCTTTCTCTTATTTTAATCCCTGTGGTTTTCGTTTCTTCTTCATCTTTTGGATGCTTTCTTCCTGAAATTAATATATTTTGGAATTTTGTCCGCATCTGTTGATTCATTGTGGCTGCTCCATCCTGCATTCTTTTGGCTTTTTTAAAAGGTATCTTCCTTTTCCCCTACGCGTTATTCTCTCTGGAACAGCTTGCTCGAATTTCCATTGCGTTTGTTTCAGGCTACAATGTGCTCATTCCATTACAGTTTCTGAACTTCTGTTCTGTTGGTTTCTTGAGGCTGTGTTTGGTTATAGTGCTGAATTTGGGGGTTTCATCATTTGCTTATTCTGTTTGGTTTCTGGGGTTTTAGATTCTGGATTTCTGTTCCCCCTTTTGGAAAAAAAAAGGGGTGTTTTTGAGATTTGGGGTTTTGGTAGTTAATGGTGGGGATGTGAGATTCTTTCCCAATTTAGAGGACATGGCTTCTTTCAGTGGATTGGGAATTGGGTTGAGTTTGGTTTTTGGGTGTCTTTTATTTGCTCTTGTTGTAGAGCTTTACTATTTGTTATGGTGGAAGAATAGGAGCTTTGCTTCACATGTTGAAGAGGATGAATTCACCAATTATGCTAAGGAATTCTTCCATCTCATTTGTTGGAAAAGGGGTTCCTCTTCCACTTCTCTTCAACCCAACAATTCCCAAATGAATCCAGAAACCAGGACTCAAGAATCTGACATTGAAATTGGTGCTACCAAGGATTTGTTGTTGAAGTCATCTGGAGGAGAAGAGGGAGTTGAGTTAGAGCTGATGAGGCTGCATAATCTTGCAGGTCCACCAAGGTTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAGTCTGAAGATAGAAGCAGAAAGGGATCAAGAACCTTAAGTGATCTTATTTTAGCTGTTGACACTCCATTACTCACTCCTTTGCCCTCACCTCCATTGAAATCACCCTCTCCTTTAAACCCCTTGAGTTCTTTCAAACACTATGGATTCAATATAAACCCTCTCTTTGAATCATCAACAGATTTAGATTTGAACAGGCTCTTGTCTTCACCTCCCCCAAAGTTTAGGTTCCTAAGGGAGGCAGAAGAGAAACTGTACAGGAGATTGATGGAAGAATCTCAGAAAAAGGCCTGTAAAAATGGTGGGTCAGTTCAGAATTCTGAAACTCAAGCCATTTCCATGCCTACATCAGAAGTTGAAGAAGAAAAGGAAGATGGGTTTTGTTGTACAAAAGAGAAAGAGCCTCAAAATCACTATGTCTCATAGTATTCTTCAAGTTCTTCACAGGTTCTTCCTTTAGCTTCTCCTCCTCTTTCTGGGCATAGATTTAATATGTTTCATTATAAGAAGATAGGTTTATGATTCAATTTTATCTTTCTTTCAGCTTTTGAGTTGATTTGCATTATGTATCAAAATGCAAACAACTTTCTCACTTTGGTTTGATTCAATGAATTAATTGATTAACCTTTTTGTTTCCCCTTTCTTTTCCAATACCACGTTTGGTGAGATTAGATTGAAATGACTCTTGCATTGTTGAAATTTTTGGGAATCTTACACTCTTTCAAAAGTGGGCTAAGGCCAATTATTAGATTGTCTTCATGAACA

mRNA sequence

TTTGCATTCAAAGCCAATCAGTAATGGAGAAAAAATATACATAAAAAAAGGGCAAAAAATTCCTTTCACTGCGATTCCACACGCTTCTGCCTAACCCACCCATGTGAGCTATCATCCAAGCAAGCCAACCCACTTCCTTCCAAATTTCACATATAAATTCTCTTCTTCTTAACCCTTCCTTTCTCTTATTTTAATCCCTGTGGTTTTCGTTTCTTCTTCATCTTTTGGATGCTTTCTTCCTGAAATTAATATATTTTGGAATTTTGTCCGCATCTGTTGATTCATTGTGGCTGCTCCATCCTGCATTCTTTTGGCTTTTTTAAAAGGTATCTTCCTTTTCCCCTACGCGTTATTCTCTCTGGAACAGCTTGCTCGAATTTCCATTGCGTTTGTTTCAGGCTACAATGTGCTCATTCCATTACAGTTTCTGAACTTCTGTTCTGTTGGTTTCTTGAGGCTGTGTTTGGTTATAGTGCTGAATTTGGGGGTTTCATCATTTGCTTATTCTGTTTGGTTTCTGGGGTTTTAGATTCTGGATTTCTGTTCCCCCTTTTGGAAAAAAAAAGGGGTGTTTTTGAGATTTGGGGTTTTGGTAGTTAATGGTGGGGATGTGAGATTCTTTCCCAATTTAGAGGACATGGCTTCTTTCAGTGGATTGGGAATTGGGTTGAGTTTGGTTTTTGGGTGTCTTTTATTTGCTCTTGTTGTAGAGCTTTACTATTTGTTATGGTGGAAGAATAGGAGCTTTGCTTCACATGTTGAAGAGGATGAATTCACCAATTATGCTAAGGAATTCTTCCATCTCATTTGTTGGAAAAGGGGTTCCTCTTCCACTTCTCTTCAACCCAACAATTCCCAAATGAATCCAGAAACCAGGACTCAAGAATCTGACATTGAAATTGGTGCTACCAAGGATTTGTTGTTGAAGTCATCTGGAGGAGAAGAGGGAGTTGAGTTAGAGCTGATGAGGCTGCATAATCTTGCAGGTCCACCAAGGTTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAGTCTGAAGATAGAAGCAGAAAGGGATCAAGAACCTTAAGTGATCTTATTTTAGCTGTTGACACTCCATTACTCACTCCTTTGCCCTCACCTCCATTGAAATCACCCTCTCCTTTAAACCCCTTGAGTTCTTTCAAACACTATGGATTCAATATAAACCCTCTCTTTGAATCATCAACAGATTTAGATTTGAACAGGCTCTTGTCTTCACCTCCCCCAAAGTTTAGGTTCCTAAGGGAGGCAGAAGAGAAACTGTACAGGAGATTGATGGAAGAATCTCAGAAAAAGGCCTGTAAAAATGGTGGGTCAGTTCAGAATTCTGAAACTCAAGCCATTTCCATGCCTACATCAGAAGTTGAAGAAGAAAAGGAAGATGGGTTTTGTTGTACAAAAGAGAAAGAGCCTCAAAATCACTATGTCTCATAGTATTCTTCAAGTTCTTCACAGGTTCTTCCTTTAGCTTCTCCTCCTCTTTCTGGGCATAGATTTAATATGTTTCATTATAAGAAGATAGGTTTATGATTCAATTTTATCTTTCTTTCAGCTTTTGAGTTGATTTGCATTATGTATCAAAATGCAAACAACTTTCTCACTTTGGTTTGATTCAATGAATTAATTGATTAACCTTTTTGTTTCCCCTTTCTTTTCCAATACCACGTTTGGTGAGATTAGATTGAAATGACTCTTGCATTGTTGAAATTTTTGGGAATCTTACACTCTTTCAAAAGTGGGCTAAGGCCAATTATTAGATTGTCTTCATGAACA

Coding sequence (CDS)

ATGGCTTCTTTCAGTGGATTGGGAATTGGGTTGAGTTTGGTTTTTGGGTGTCTTTTATTTGCTCTTGTTGTAGAGCTTTACTATTTGTTATGGTGGAAGAATAGGAGCTTTGCTTCACATGTTGAAGAGGATGAATTCACCAATTATGCTAAGGAATTCTTCCATCTCATTTGTTGGAAAAGGGGTTCCTCTTCCACTTCTCTTCAACCCAACAATTCCCAAATGAATCCAGAAACCAGGACTCAAGAATCTGACATTGAAATTGGTGCTACCAAGGATTTGTTGTTGAAGTCATCTGGAGGAGAAGAGGGAGTTGAGTTAGAGCTGATGAGGCTGCATAATCTTGCAGGTCCACCAAGGTTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAGTCTGAAGATAGAAGCAGAAAGGGATCAAGAACCTTAAGTGATCTTATTTTAGCTGTTGACACTCCATTACTCACTCCTTTGCCCTCACCTCCATTGAAATCACCCTCTCCTTTAAACCCCTTGAGTTCTTTCAAACACTATGGATTCAATATAAACCCTCTCTTTGAATCATCAACAGATTTAGATTTGAACAGGCTCTTGTCTTCACCTCCCCCAAAGTTTAGGTTCCTAAGGGAGGCAGAAGAGAAACTGTACAGGAGATTGATGGAAGAATCTCAGAAAAAGGCCTGTAAAAATGGTGGGTCAGTTCAGAATTCTGAAACTCAAGCCATTTCCATGCCTACATCAGAAGTTGAAGAAGAAAAGGAAGATGGGTTTTGTTGTACAAAAGAGAAAGAGCCTCAAAATCACTATGTCTCATAG

Protein sequence

MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWKRGSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTLSDLILAVDTPLLTPLPSPPLKSPSPLNPLSSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSVQNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS

Homology

[Close]

BLAST of Sed0006133.1 vs. NCBI nr
Match: XP_038902956.1 (uncharacterized protein LOC120089527 [Benincasa hispida])

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 237/279 (84.95%), Postives = 249/279 (89.25%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFTNYAKEFFHLICW 
Sbjct: 1   MTSFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSQV-EDEFTNYAKEFFHLICWN 60

Query: 61  RGSSSTSLQPNN---SQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAG 120
               S+SLQPNN   +Q N E RTQESDIEIG  KDLLLKSSGGE+GVELELMRLHNLAG
Sbjct: 61  WKRGSSSLQPNNFRENQRNLEVRTQESDIEIGCRKDLLLKSSGGEDGVELELMRLHNLAG 120

Query: 121 PPRFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPL 180
           PPRFLFTIKEETKEDLESEDRSRKGSRT  LSDLIL VDTP LTPLPSPPLK+ SPLNPL
Sbjct: 121 PPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTVDTPFLTPLPSPPLKATSPLNPL 180

Query: 181 SSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGG 240
           SSFKH+GFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEE+QKKAC NGG
Sbjct: 181 SSFKHHGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEEAQKKACNNGG 240

Query: 241 SVQNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           SVQN ET+AIS P + VEEE+EDGFCCTKE+EP+NH+ S
Sbjct: 241 SVQNYETKAISNPKAAVEEEEEDGFCCTKEREPENHHAS 278

[Close]

BLAST of Sed0006133.1 vs. NCBI nr
Match: XP_022947973.1 (uncharacterized protein LOC111451693 [Cucurbita moschata])

HSP 1 Score: 436.0 bits (1120), Expect = 2.3e-118
Identity = 229/277 (82.67%), Postives = 245/277 (88.45%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60

Query: 61  R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
           R  SSS+S+Q NNS  NPE R+QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61  RSSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120

Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
           RFLFTIKEETKEDLESEDRSRKGSRT  LSDLILA+DTP LTPLPSPP   PS   PLSS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PLSS 180

Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
           FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240

Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           QN ETQ IS P +  E+E++D  CCTKEKE QNHYVS
Sbjct: 241 QNPETQPISNPIAAAEDEEDDEVCCTKEKELQNHYVS 273

[Close]

BLAST of Sed0006133.1 vs. NCBI nr
Match: XP_023532268.1 (uncharacterized protein LOC111794467 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 4.0e-118
Identity = 229/277 (82.67%), Postives = 244/277 (88.09%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60

Query: 61  R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
           R  SSS+S+Q NNS  NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61  RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120

Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
           RFLFTIKEETKEDLESEDRSRKGSRT  LSDLILA+DTP LTPLPSPP   PS   PLSS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PLSS 180

Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
           FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240

Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           QN ET AIS P +  E+E++D  CCTKEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEVCCTKEKELQNHYVS 273

[Close]

BLAST of Sed0006133.1 vs. NCBI nr
Match: XP_023007067.1 (uncharacterized protein LOC111499670 isoform X2 [Cucurbita maxima])

HSP 1 Score: 434.1 bits (1115), Expect = 8.9e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60

Query: 61  R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
           R  SSS+S+Q NNS  NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61  RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120

Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
           RFLFTIKEETKEDLESEDRSRKGSRT  LSDLILA+DTP LTPLPSPP   PS   P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180

Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
           FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240

Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           QN ET AIS P +  E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273

[Close]

BLAST of Sed0006133.1 vs. NCBI nr
Match: XP_023007066.1 (uncharacterized protein LOC111499670 isoform X1 [Cucurbita maxima])

HSP 1 Score: 434.1 bits (1115), Expect = 8.9e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60

Query: 61  R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
           R  SSS+S+Q NNS  NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61  RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120

Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
           RFLFTIKEETKEDLESEDRSRKGSRT  LSDLILA+DTP LTPLPSPP   PS   P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180

Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
           FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240

Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           QN ET AIS P +  E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273

[Close]

BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match: A0A6J1G835 (uncharacterized protein LOC111451693 OS=Cucurbita moschata OX=3662 GN=LOC111451693 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 229/277 (82.67%), Postives = 245/277 (88.45%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60

Query: 61  R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
           R  SSS+S+Q NNS  NPE R+QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61  RSSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120

Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
           RFLFTIKEETKEDLESEDRSRKGSRT  LSDLILA+DTP LTPLPSPP   PS   PLSS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PLSS 180

Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
           FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240

Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           QN ETQ IS P +  E+E++D  CCTKEKE QNHYVS
Sbjct: 241 QNPETQPISNPIAAAEDEEDDEVCCTKEKELQNHYVS 273

[Close]

BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match: A0A6J1KZH4 (uncharacterized protein LOC111499670 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499670 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.3e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60

Query: 61  R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
           R  SSS+S+Q NNS  NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61  RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120

Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
           RFLFTIKEETKEDLESEDRSRKGSRT  LSDLILA+DTP LTPLPSPP   PS   P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180

Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
           FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240

Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           QN ET AIS P +  E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273

[Close]

BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match: A0A6J1KXJ9 (uncharacterized protein LOC111499670 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499670 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.3e-118
Identity = 228/277 (82.31%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RSF S V EDEFT+YAKEFFHLICW+
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEV-EDEFTSYAKEFFHLICWR 60

Query: 61  R-GSSSTSLQPNNSQMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAGPP 120
           R  SSS+S+Q NNS  NPE R QE DIEIG++KDLLLKSSGGE+GVELELMRLHNLAGPP
Sbjct: 61  RSSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPP 120

Query: 121 RFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNPLSS 180
           RFLFTIKEETKEDLESEDRSRKGSRT  LSDLILA+DTP LTPLPSPP   PS   P SS
Sbjct: 121 RFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPS---PFSS 180

Query: 181 FKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSV 240
           FKH+GFNINPLFESSTD DLNRL+SSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGS+
Sbjct: 181 FKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSI 240

Query: 241 QNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           QN ET AIS P +  E+E++D FCC KEKE QNHYVS
Sbjct: 241 QNPETPAISNPIAAAEDEEDDEFCCRKEKELQNHYVS 273

[Close]

BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match: A0A6J1D323 (uncharacterized protein LOC111017117 OS=Momordica charantia OX=3673 GN=LOC111017117 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.8e-117
Identity = 225/282 (79.79%), Postives = 251/282 (89.01%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLICWK 60
           +ASFSGLGIGLSLVFGCLLFALV ELYYLLWWK  SF+S VE+DEFTNYAKEFFHLICW+
Sbjct: 2   VASFSGLGIGLSLVFGCLLFALVAELYYLLWWKKSSFSSEVEDDEFTNYAKEFFHLICWE 61

Query: 61  RG-SSSTSLQPNNS---QMNPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLA 120
           R  +SS+SLQPNNS   + NP+ R QE D+EIG++KDLLLKSSGGE+GVE+ELMRLHNLA
Sbjct: 62  RAPASSSSLQPNNSRPNETNPQLRNQEPDMEIGSSKDLLLKSSGGEDGVEVELMRLHNLA 121

Query: 121 GPPRFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLKSPSPLNP 180
           GPPRFLFTIKEETKEDLESEDRSRKGSRT  LSDLIL  DTP LTPLPSPPLK+PSPLNP
Sbjct: 122 GPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTADTPFLTPLPSPPLKAPSPLNP 181

Query: 181 LSSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKKACK-- 240
             S+KH+GFNINPLFESST+L+LNRLLSSPPPKFRFLREAEEKLYRRLMEE+QKKA +  
Sbjct: 182 FGSYKHHGFNINPLFESSTELELNRLLSSPPPKFRFLREAEEKLYRRLMEETQKKASRSN 241

Query: 241 NGGSVQNSETQAISMPTSEVEEEKEDGFCCTKEKEPQNHYVS 275
           N GS QNSET+AIS P +  EEE E+GFC T+EKEPQNH++S
Sbjct: 242 NDGSAQNSETKAISKPKTAAEEE-EEGFCFTEEKEPQNHHMS 282

[Close]

BLAST of Sed0006133.1 vs. ExPASy TrEMBL
Match: A0A5A7V7S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00610 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.0e-103
Identity = 213/267 (79.78%), Postives = 228/267 (85.39%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVEEDEFTNYAKEFFHLIC-- 60
           M SFSGLGIGLSLVFGCLLFALV ELYYLLWWK RS  S   EDEFTNYAKEFFHLIC  
Sbjct: 1   MTSFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSITSSQAEDEFTNYAKEFFHLICWD 60

Query: 61  WKRGSSSTS--LQPNNS---QMNPETRTQESDIEIGATKDLLLKSSGGEE-GVELELMRL 120
           WK+GSSS+S   QPNNS   Q N E R QESDIEIG +KDLLLKSSGGE+ GVELELMRL
Sbjct: 61  WKKGSSSSSSLQQPNNSRENQRNLELRNQESDIEIGCSKDLLLKSSGGEDGGVELELMRL 120

Query: 121 HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRT--LSDLILAVDTPLLTPLPSPPLK-SP 180
           HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRT  LSDLIL VDTP LTPLPSPP K + 
Sbjct: 121 HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTVDTPFLTPLPSPPFKPTT 180

Query: 181 SPLNPLSSFKHYGFNINPLFESSTDLDLNRLLSSPPPKFRFLREAEEKLYRRLMEESQKK 240
           SPLNPL+SFKH+GFNINPLFESS DLDL+RLLSSPPPKF+FLREAEEKLYR+LMEE+Q K
Sbjct: 181 SPLNPLNSFKHHGFNINPLFESSNDLDLSRLLSSPPPKFKFLREAEEKLYRKLMEEAQNK 240

Query: 241 ACKNGGSVQNSETQAISMPTSEVEEEK 257
             KN GSVQ+SE +AIS+P   V EE+
Sbjct: 241 HNKNAGSVQSSEIRAISIPKEAVREEE 267

[Close]

BLAST of Sed0006133.1 vs. TAIR 10
Match: AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-41
Identity = 119/249 (47.79%), Postives = 149/249 (59.84%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWK--------NRSFASHVEEDEFTNYAKE 60
           M + SGLGIGLSL+FG LL ALV E+YYLL  K          S     EE +   YAKE
Sbjct: 1   MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60

Query: 61  FFHLICWKRGSSSTSLQPNNSQMNPETRTQES---DIEIGATKDLLLKSSGGEEGVELEL 120
              L C+K+     SLQ NN     E    E    D+E+G  K L    +GG+ G E EL
Sbjct: 61  LIQLFCFKK---PQSLQQNNGGREGEVSMNEDGNPDLELGLMKHL----NGGDLGFEAEL 120

Query: 121 MRLHNLAGPPRFLFTIKEETKEDLESED--RSRKGS----RTLSDLILAVDTPLLTPLPS 180
           M+LHN     RFLFTI EETK DLESED  +SR GS    R+LSD+    +TP  TPL S
Sbjct: 121 MKLHN----QRFLFTIMEETKADLESEDGGKSRLGSRSRRRSLSDVPNDCNTPGFTPLAS 180

Query: 181 PPLKSPSPLNPLSSFKHYGFNINPLFESSTDLDLNRLL---SSPPPKFRFLREAEEKLYR 230
           P   S    +PL S+ H+GF  NPLFES  +L+ N+     SSPPPKF+F+R+AEEKL +
Sbjct: 181 PKKSS----SPLESYPHHGF--NPLFESDGELEFNKFFRSSSSPPPKFKFMRDAEEKLRK 232

[Close]

BLAST of Sed0006133.1 vs. TAIR 10
Match: AT2G39560.1 (Putative membrane lipoprotein )

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-27
Identity = 94/250 (37.60%), Postives = 129/250 (51.60%), Query Frame = 0


Query: 1   MASFSGLGIGLSLVFGCLLFALVVELYYLLWWKNRSFASHVE--EDEFTNYAKEFFHLIC 60
           M S S +G+ LS+VFGCLL AL+ ELYYLLW K RS     +   D  T   +E   + C
Sbjct: 1   MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKRSTTRRPDFRNDYSTPGTRELLFIFC 60

Query: 61  WKRGSSSTSLQPNNSQM-NPETRTQESDIEIGATKDLLLKSSGGEEGVELELMRLHNLAG 120
               ++ +S  P++S   NP+    +    +               G E       N+ G
Sbjct: 61  CSSSTNPSSSSPSSSSFSNPKPIDTQQQCPL-------------NNGFE-------NVGG 120

Query: 121 P---PRFLFTIKEETKEDLESEDRSRKGSRTLSDLILAVDT-----PLLTPLPSPPLKSP 180
           P   PRFLFTI EET E++ESED      ++L+DL L +++     P LTP  SP L +P
Sbjct: 121 PGLVPRFLFTIMEETVEEMESEDVVSTKGKSLNDLFLNMESGVITPPYLTPRASPSLFTP 180

Query: 181 SPLNPL--SSFKHYGFNINPLFESSTDLDLNRLL------------SSPPPKFRFLREAE 226
            PL PL   S       I+ LFESS+D + NRL+            SSP  +F+FLR+AE
Sbjct: 181 -PLTPLLMESCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKFLRDAE 229

The following BLAST results are available for this feature:

BLAST of Sed0006133.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902956.1	1.4e-123	84.95	uncharacterized protein LOC120089527 [Benincasa hispida]	[more]
XP_022947973.1	2.3e-118	82.67	uncharacterized protein LOC111451693 [Cucurbita moschata]	[more]
XP_023532268.1	4.0e-118	82.67	uncharacterized protein LOC111794467 [Cucurbita pepo subsp. pepo]	[more]
XP_023007067.1	8.9e-118	82.31	uncharacterized protein LOC111499670 isoform X2 [Cucurbita maxima]	[more]
XP_023007066.1	8.9e-118	82.31	uncharacterized protein LOC111499670 isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0006133.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006133.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G835	1.1e-118	82.67	uncharacterized protein LOC111451693 OS=Cucurbita moschata OX=3662 GN=LOC1114516...	[more]
A0A6J1KZH4	4.3e-118	82.31	uncharacterized protein LOC111499670 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KXJ9	4.3e-118	82.31	uncharacterized protein LOC111499670 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1D323	4.8e-117	79.79	uncharacterized protein LOC111017117 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7V7S7	1.0e-103	79.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0006133.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59350.1	2.5e-41	47.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G39560.1	4.5e-27	37.60	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..249
None	No IPR available	PANTHER	PTHR34054:SF6	TRANSMEMBRANE PROTEIN	coord: 1..263
None	No IPR available	PANTHER	PTHR34054	EXPRESSED PROTEIN	coord: 1..263

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0006133	Sed0006133	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006133.1-exon	Sed0006133.1-exon-LG01:6435980..6437780	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006133.1-three_prime_utr	Sed0006133.1-three_prime_utr-LG01:6435980..6436318	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006133.1-cds	Sed0006133.1-cds-LG01:6436319..6437143	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006133.1-five_prime_utr	Sed0006133.1-five_prime_utr-LG01:6437144..6437780	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0006133.1	Sed0006133.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane