Sed0004416.1 (mRNA) Chayote v1

Overview


Name	Sed0004416.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	angio-associated migratory cell protein
Location	LG12: 6900353 .. 6912311 (+)
Sequence length	1663
RNA-Seq Expression	Sed0004416.1
Synteny	Sed0004416.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTAATTACTTGCTCTGTGGCGGGCTACTCGAAACATATCTTTTGAAGTTATCTATCCCTCAAGCTGCCCGCGCGCCGGCGGCGCGACTACAACTCCGGCGACACTCATACGGCGGCGAAAACACTTCCAAGAACAGCGAGTTTCCATTGCGGCGATCCGGAACAAGGCGACTATAATCGCTGCGTTAGCTTGGTTCGGACTCGAATCAGTACACTCCAAGAAATCGGTAAAAAATTATAGAACAATCCCCTAGGGTCAATTAAATCGGTTCATACTTGAATAGGTTCTAATCTTAGCAAACCATGTTTTAATTAAGGTGCATCAAAGATCTAGGTCTTATTTGTCGAAAATTGAACTTGTTGCTCAGTGCATGTTGAACTAATTATGTATGATTTATCTGCTAATTGGTTTTAATAAGGATAACAATAGCATGGTGAAATGTTGTTGGAATATACTAACACTATGTATTATTTAGGTGGTTATATTGTTAGGAAGTGTTTAGTCTCTGTTCAGTTGTGGTTATTCTGTTATTTAATCTTGTTCAACAAATATATTATATAAATAGGCTTGTAGATCCTCATTGTATTCATTCTGAAGATTGGAATAATATTTCACATATTGAGGGTTTCAACAAAGTAGAGCTTAAGTTGGCCCGAACACTCATGGATATCGGAGTGTTATTTTTCTTAATTTTTTTGAACCATTGTTGCACACTGCAGTGTATTGAAAAATTATGGGGTTGGGGTTGGGCTATAATTCATGGTTTAATGATTTTCTTCAAAAAGTAAAAAAATAGAACAAAAGAAAAGGCATTATTGAGAATAAATAGTTGCTTCCTTGATTCTCACATTATCTTTTCCCTCTATTTCACAGCAATTCCAACTGCTCTAGGTTTCGTACGGATATAGAGCTATGAATACTCCAGCTTCACATGAAGAGGAAGATGATCATGGTGATGTTTTCCTCGATGAATCTGACATAATCCAGGAAGTTGTGGTTGACGATGAAGGTGTCTTTTTCCTCTTGTTGATTTTGTGTGTGTGTGTGATCGTGTGTTTTTTCAGTAAAGTTTGCTGTACTAATTATTGGATTTATTCTGTCAATATAAGATCTTCCTGATGCTGTTGATGAAGAAGGCTCTGATGATGAATTTGTTGGTAATGGTATGGGATATTATTTTCTGTAATCTTAATGTTCGATCTTCCTAAAGAACATGTCTGTTCTGTTATATAGGTTTATAGCTTTCTTGTTATGTTTGAAGTTTATTTAAAAATTTATTGAGTATTCTGATGGGTAAATATATCACATGTATTGCATGATTTTCAGATGAGGGTGATGATTCAGTCCATACTTTTACCGGTCATACTGGTAAGAATCTATCTAATTGAAAAAAGTTATATATGTATATATATTGCTTATTTTCCTTCTTTTGCAATTGCTCTTTCTGCAAGGTTCATATATTTATTTGATGAGTCAATTGATGACAATGATAACTCATGTTTAAATCAAAGTGAAGTCATATTAGTTCTATGATAATGCCAAGTTATCTTTATTCATCTTATAAGTGGAGCTGTGTTTTTACTTTTTATGCATATGTCAAAGTTAATGTGATTATCAAAACCTGCCTCTTCATATTAATGGAAGTTCATATTGGTGTACCCCTTTTCCTCAGGTGAGGTTTACACGGTGGCTTGTAGTCCAATAGATGCCGTCTTAGTTGCAACAGGTGGTGGAGATGACAAAGGATTTATGTGGAAGATTGGCAGAGGAGATTTTAATCAGGAACTTACTGGTGCGGGCCATGATCCTGTAAATCTATATATATATATATATATATATATATAATTTTTTCAGTTCCAAAAGTATTATATTATGCTTGCTAACAATGCTAAGTACCAGTTTCACTTCCTTTCTCCTTCACTAAATCTGTAAATTAACATATTGTATCTTATATCTGTTAACTTTTTCGAACTATTTTTTCTTCAACAATACTTTGGGTGGGAGATTTAGACTCACAACCTCTTGATTATCAATTCATACATCATGCAAGTTGAGTTCAGCTCTCAGTTGGCCTTTTTTAACTGGTTTAAAGGCAACTTAATGCAGGTCACAAAGATTCTGTGTCTAGTCTATCGTTTAGTGCTGACGGACAATTACTGGCATCAGGGAGTTTTGATGGACTGATCCAAATTTGGGATATTTCATCGGGCAATCTTAAATGCACACTTGAAGGCCCTGGAGGAGGAATTGAGGTGAAGCTATATTTATTTTTTTCATAAAATTGATCATTTAACCAAGCCATTCATTTCTAGGATAATCGTGTTTAGACTCATCATTAATAAGCATTTGATAAATCAGTGGGTAAGGTGGCACCCGAGAGGTCATCTGGTTTTAGCTGGTTCTGAGGATTCCGCCGCTTGGATGTGGAATGCTGATAAAGGTGTCTATCTTAATATATTTTCTGGTCACGGTGCTAGTGTTACTTGCGGTGATTTTACCCCTGATGGTATTTAACTTATTTCCATCTTTTTCATACTATACATTTAATAGTTAAGATATGTTTGGTAACGGTTCACTGTTTCTCAAGGTAAAATGGTTTGCACGGGCTCGGATGATGCAACAATGAGGATATGGAATCCAAGAAGTGGTGAAAATATTCATGTTGTGAGGGGTATGTACCGTATGTTTGAAACCTTAGTGTATGCTCAGAGTTTTAAGGTTTCCTTTCGAGTTTTAAATCTTTATACGATTTCCAAGTTACAAGGAATTAAAAATTGAAATCTCTTACCCTGATTTTGGAACTTGACCGTCAATCATTTGACTATACTGTTTGGGAAGTGAAATTATTCAAATTAAAATTTCCATCCTTGTCCATATGAAAGCGTTACCAATCTGCTTCTCTATTTATAAGGTTGTAGATCCATGATGACCTCTTATGAATCAATTTCCTACCGAATTTTCTTGACATCTAAATATTGTAGGGTCAGGTGGTATGTCATGTAAGAATAGTCGAGGTGTCCGTAAGCTAGCCCGAACACTCATGTATTAAAAAAAAGAGCTCTTATATACATATAGGATGGGTATCTTTATAAAAAATTAATATCACGTAGTTTTAATGTATATGTTATCACAACATAAATTAATCAAACTTATAGATTAAATCAATAATGGCAACAAGGGTAATAGGTCAACTGGCATAAGTGTGCCCATGACTAGGAAGTCCTGGTTCAACCCTCCCCGCCCCACTCCACTTGTTGAATTAAAAGAACTAATAATTCAAAGCTCTACCTTTATTTAATTTTGACCATCGATATTTTATACCATAATAAATCAAATTTGTAAGTTTTATTTAATCTGCTTCTCTACCTTTATTTAATTTGTAAGTTTTGCATCGATCCTGGCGATGGGCGGAAAGGGCGTGGCACAGGCAGAGGGCGACGGACTGGGCTTGGGCGGAAGCGCGGGCTGGAGTGCGGGCGGAAGCGGCGCGGGTGGTCGCGCGGGTTGGGGCGCAAGCGCGGGCGCCGGGGGACGAGCGGGCTGGGGGCCGGGCTGTGGGTTGGGCGTGGGCGGCGCGGAAGGAAGGGGCTGGGGCTCGGGCGGCGGAGTAGGGGGCGAGCGCGGTCGAGGGGCTGGCGGGTCGGGCGTGGGGCACGGCGGGCCAGGCGGCGGTCCAGGGGGACCGGGTCGGGTTGGGTTGATTCGGTCGGGGCCGTTTGGGTCGGACCAGAGAGAGAGGTACCCGGGGTTTGGCAATGAGGGGAACATCGTGGGACCGGGAGGCGAGCAAAAAGGGGGCGCCCGAGTCCACGAATCACCGGAGGAGAGGAGGGTGCGCATCGGTTATGAAAGGCCAATAGCGCACGACGGTTGGAACGAACGTGGGTGGGATAGCTATAATCGAGAGGGAGACCGAGAAGACTGGAGGGAGTGGGAGGATCGATATGAACATGGAGGACCGAGAGCAGGTCCAGTGTTTGACAGAAGGTTACGAAAGCTTGAGATGCCGGTTTTCAAGGGTCTTACCGATGAGGATCCGGAAGGGTGGTTGTGTCGAGTGGAACGGTATTTTTGGGTTAACCGATTAAATGGGCAGGAACGAGTCGACGTCGCAGCTTTGTGTATGGAGGGTGAGGCTCTGGAATGGCTGCAGTATGAGGAAGATCGATCGCCGATCAGTTCTTGGGAAGAATTTCGAGAACTCCTTTTACACCGTTTTCAACCGAGCATAAATGACAACAGGTACGCTAAGCTGATGAGTTTGCGACAGGAAGGCACTGTTAAAGAGTATCGGCGATTGTTTGAGAAATATGCTAAGGGAATGCGCGATATTAGCGCCAGTGCATTAGAAGGGAAATGGGAAAGCGGTTTAAAAGAAGAAATCAGGAATGAAATGAGAAAATTGCGACCCGTGGGAATCCAAGATAAAAAGTTCATGGCACAAGTAATTGAGGATGACCTGGCTTTCCGAGCTCTAGGAAAGGGGGTGAGTCCGGGACTAGTGAATAAACCAAGTGTGGGGTCGGGACCCGTTAGTGCGAAGGGAGCAGGTGTTGCAACTATGAGAACTACAACGTTCTCGACGTCTAAACCAGTTACAAACAGCACAACAACCACTATGTCGTATAAGCGTTTGACAGACAGTGAAATCCGTGTCAGGAAAGATAAAGGATTGTGTTTCCGTTGTGACGAGAAATTTGTTCCCGGGCATCGGTGCAAAAGGAAAGAACTTCAGTCTTTGGAGATATTGGTAGTACGCGACACCTATGATCATGCGGATTCTTACGAGAATGATGAGGCATTAGAGGATGAAACTTTGGTAGATACAGGAGATACAAGGGATTTAGCGGCCTTGTCCTTGAACTCCTTGGCGGGGCTGAGCTCACCAAAGACTTTGAAAGTCACTGGGTTTATTCAGGGATTGGAGGTAGTAGTTCTTATAGATTGTGGGGACACCCATAACTTTATTTCCGACGTCATTGTGGAGAAGCTAAATTTACCAGTAGAACCTTCAAACAATTATGGCATCATGTTGGGAACCGGCGAATCTGTTAGAACGGCAGGAATCTGTAAAAATGTCGTTCTACATCTGGCTGAACTGAAAGTGGTCAATGATTTCCTACCATTACCCTTAGGTAGCGCAGATGTGATTTTGGGGGTAGCGTGGCTAGAGACATTGGGGAAGATCGAATTCAATTTTAGTTCCCTGAAGATGCGGTTTGTGTTGGGATCCTGGCAGGTAGAATTGCAAGGGGACCCCCGTTTGGTAAAGGCTCAAGTATCATTGAAATCCATGATGAAATCCTTACGACCTGAGGACCAAGGATTACTGGTCGAGTTGAACATGCTTGAGGCGACAACACATGATTGTGGGCCGACGAAGATGTTTCCGGATTTATCGCAGGTACCCCGAGAGCTACACTCTTTAATTGAATCTTTTTCACCTGTTTTTCAATCCTTGGCAGAATTACCACCTGAAAGAAACTGTGATCATGCGATTGAACTGGTTGCGGGGACGAACTCAGTGAATGTCCGCCCGTACCGGTACCCACAATACCAAAAGAACGAGATAGAGAAACTAGTACGGGAAATGTTGTTAGCTGGGGTAATTCGCCCTAGCACGAGTTCGTTCTCTAGTCCTGTATTGCTAGTGAAAAAGGATGGAAGTTGGCGTTTCTGTGTCGACTACCGTGCCTTGAACCAAGCTACAATACCAGATAAGTACCCGATACCGCTGGTGGATGAGTTGTTGGATGAGCTTCATGGCACATCTATATTCTCGAAAATTGATCTAAAGGCTGGATATCACCAAATCCGTGTCAAACCGACTGACATACACAAGACAGCTTTCCGGACGCATGAGGGACATTACGAGTTTGTAGTCATGCCTTTTGGGTTGCGGAATGCTCCGGCTACGTTCCAATCTGTGATGAATGAGATTTTGCTATCGTATCTGCGTAAGTTCGTGCTAGTATTCTTTGATGATATTTTGATCTACAGCATGACTATTCAAGAACACAGGGAGCACCTGGCTCGAGTTTTTGAGGTGCTGCAGGCACATGCCTTTGTCGCAAATGCCAAGAAATGCCAATTTGGTTTGCAACGCATTGAGTACTTAGGGCACTTTATATCTGTGGAAGGCGTTTCAGCCGACCCGGCAAAGATCGAAGCAATGATAGAGTGGCCAAGTCCTCGAAATATTCGGGACCTACGAGGATTCCTGGGGTTGACCGGATACTATCGACGATTTGTGGCTAACTACGGTTCCATGGCTTTTCCGTTGACCCAGTTATTAAAGAAAGGGAAGTTTGAGTGGGGATCGACTGCTGAAGACAGTTTTCAGAGAATGAAACATGCTATGAGTAGTGTCCCGGTCCTACGATTGCCAGATTTTGACCAAGTATTTGTGGTCGAAACCGATGCTTCGAGTATAGGAGTGGGAGCAGTTCTGATGCAACAGGGTCAACCGATAGCATATTTTAGCAAGGCATTGCCTATTACTCATCGTGTGAAACCGGTATATGAACGTGAATTGATGGCAATCGTTTTCGCGGTGCAGCGATGGCGGGCCTATCTGTTAGGGCATCACTTTGTTGTTCGTACTGATCAGAAGAGTCTTAAATTTCTTCTTGAGCAGCGTGTAGTGGATGGCGACTATCAGCGTTGGATTGCAAAATTAATAGGATATGATTTCAGCATTGAATATATGAAGGGTCTTGAAAATCGAGCCGCGGATGCTTTGTCTCGAATGCCCGAGAAATGCGAGCTGGGCATGCTGAGTGTGGTGGCGGGTATTAACACCGCCGTATTTACACAACAGGTTAAGGAGGATGCTAAGTTAATGGAAATTTATAAGTCGTTGGCAGCTAGCGAGGGGGGCCCTCCGGGATACTCAGTAGTTGGTGATGTGTTGCTTTACCAGGGTAGGCTGGTTTTGCCTCCGACATCTCCAACGATTCCTCTACTGTTGCTTGAATTCCATAGTGGTGCTATTGGGGGACATTTCGGAGTCCTTAAAACTAATCAGCGTTTGGCTAAGGAAGTATATTGGCAAGGAATGAAGGCTTGTGTGCGTGCTTTTGTGGCCGAATGCTCTATCTGTGTTCAAGCTAAACACCTATCTTTATCTCCTGCGGGGCTGCTACAGCTTTTACCGATTCCTGCACAGGTCTGGGAAGACATTTCGATGGACTTTGTGGAGGGGTTACCGCGATCAGAGGGTTATGACACTATACTGGTGGTGGTGGACCGTCTCTCCAAATATGCTCATTTCATACCTCTTCGACACCCGTTTTCTTCCTTGTCGGTGTCGAAGGTGTTTATCAAGGAGATCGTTCGGTTGCATGGAATTCCGAAAAGTATTGTTTCTGACCGCGATAAGGTTTTTACAAGTTTGCTTTGGGAAGAGATGTTTAAGGCTACGGGCACTAAACTCTGTCGGAGCACCACTTACCACCCACAGACTGATGGGCAGACTGAGGTGGTGAATCGTTGTTTGGAATCCTATTTGAGATGTTTTGTGATGCATCATCCCAAGGCGTGGTACCAATGGTTGTCCTGGGCAGAGTACAACTTTAACACTTCTTTCCACTCATCCACGGGTATGACACCTTTCGAGATTATTTATGGCAGACCCCCTCCTACCATTTTGGGATATGATCACGGTGTTAGTCCGGTGGCGTCTGTGGATTCAATGATGAAGGATCGTGATCGGATATTGGCCACCTTAAAGGCTAGTTTGTCGCGAGCGCAGCAATCTATGGCGGATCGCGCCAACGCAAAACGTAGGGATGTACAGTTTAATATTGATGATCTGGTGTATATCAAGCTTCGACCATACCGCCAATCTTCTGTGGCTAAATTTCAACACCCGAAGCTGGCGCCGAGGTTTATTGGGCCCTACCGTGTGCTAGCACGAGTGGGTCCTGTTGCTTATCGTTTGGAACTTCCGCCGGCAGTTAAGATTCACCCGGTTTTTCACGTGTCAGTTCTGCGTAAAGCGGGAGACTCTTCGGTTATTGTCATGTCTACACCGCCCTTGGTGGGAGATGATCTGTGCATGGTGGTTCGCCCTAAGGCTGTGTTGGGTGTCCAAGAGAATTTACAAGGGGCCGGATCGCGTCAAGTTTTGGTTCAATGGGAAGGCTCCGCACCAGAGGATGCTACTTGGGAATCCGCGGCTGATTTAGATTTGCAATTTCCGGACTTTCACCTTGAGGACAAGGTGGCTCTGTGGGGGGGAAGTATTGATACGATCCCGCCGACATTAAAAGTATATTCGAGGCGGAGCAAGAAGTGAAGAATGAGTTATTTACTATTTTAATATATTTTATTATGTGAATTTAGGTTGTAATGGGCCTATGGGCCTAAATAGAGTTATTTCCAAAGTTAGGTTAAATCCTAGGAACGCTATAAATAGGAAGACTAGGTTACTCTTTTGTTTTATCGAATTATCATTATTGTATTGTGGCTCTTTGAGAGATTCTCTCGAGAGGTTTTTTTACCTAGATTAATAAAATAGAGCGGTAGATTCTATCAGTTTGGTACTATATGGTTAGTTGTAAATTTATTTATGAGTTAACTTATTTAAAGAAAATTCCGGGAAGCTCATGTAGGTATAAAATTTTCTTCTTTCACGTGGTGATGATTTTATCGTTTTTTATTCTTCAGGTCATCCTTATCACACTGAAGGATTGACTTCCCTAGCACTCAGTTCTGATTCAACCCTTGCTCTTTCTGGTTCAAAAGATGGTTCTGTTCATATCGTGAATATAGCAACTGGAAAGGTATTTTCTATATTTTTTTAGACAACATTCGTCTGTCTATTTACCTCCGGCTCTTATGGAAGGAAGAGGAATTGTGATAGGGTTGGGCCTTAGTAGAAATAGGAATAATATAAGGGTATGTTAGCAATTACTTGGATGCTAGGGGCATTCTTAACAATAAATGAAAAGAGAAGGGGTATTGTATATTTTAGCATGCTAGAAACTATTTGGACGGTGTCAACCTAACTTTAGTTCATGCTCAACTGGTTAAAACATATATCTTTGACTTTGAGCAAGAAGTCAAAAATTCAAGTTAAATATTCAATACAGGAAGCTAAGTTTAAGTGAGTGTAGTTAATATTTAATACAGGAAGCTAAGTTTAGTTGAGTGTAGTTAAGTACACAGTTAGGTTAGAGAGGAAGGCGTAAAGAGAAAGGGTATTGTATATTTTAGCATGCTTGATATTATTTGGACGGTGCCAACCTAACTCTAGCTCATGCTCAACTGGTTAAAACGTATATCTTTTATTTCGACCAAGAAGTTAGAAATTCAAATTCCCATTTCCTATATAAAAAGGAAATTAGTTGGTCAGTCTAGTATAAGAGAGAAAAACAACTGTAGTAGAGCAAGCGAGAACTAGCTTCTTGAAAGCTTGGAAATGTGTCTTCTTTAAGGCATCTCATGAACAGAACTTAACCTTGACAAAAGGGGTTTCTATGAATTGTACTTGAGCTTATGGGACTATATTTTGATATCTAAGGTCAAGGCATCAAGCTAAATTGAGAATTTTGACAGAACGTGTTCTTTTCTAAACTTCATTTGGTTATTTGTTGAAAATAATATGATGACTGGGTGTGCAAGATATTGGCGAGTTGAGTCTTATGCTCGCCCGCACTTTTATATCGTTGAATGGTAGATTATGCGGATTGCAGCTTAACTGATTAATTTCAATAAACCACTTTGGATTGGCATATTAAATACTAATTGTTGTAGGTTTCTAACAGATGTTCTGTAGGACTTGTTGAGATATCCACACATCAAATTTGAGGACCGTGGATATAGCTTTTAATGTTTTCACGTAATTAGTGGTGCTGTTGATTGATTGAAATGGAATCACTTATTGCTTTTGACAGGTAGTAAATTCTTTGGTTTCCCATTCAGACTCAATCGAGTGCATTGGTCTAGCACCAAGGTATCGTGATTTTCTGCTATGTCATTCACTGCCCAGTTAGAGGTTTAAAATAAGAAAATATGAAAGCATGATAATCATTAGAAAAGTATTGTTTTATGCCCAAAGATTGACGCGTGGTTGAAGACTGGACTCTGAAGATGTGCTCCCTTTAAGGTCTCAAGTTTGAGACTCGCCTATTACATTAATTTATAGACACTTCTCATACCTCTATTCCTTCGATGTCTCCCGGTGCCTGGCCTAGGGACATGCATGGTTACCTTGGGTATAGTAGAGCGAAACTCCAATTTTCCAGTTTCTAAAAAATAATAATTAAAAAAAAATGTATGTTCTTCCCTGTGCGATGAAATTTGATCAAGATGTTTAATTAGTAGTAAAATGTCCGGTAGATAACTGCAAAATGCTATAGACCTTTTTATATTCCATAACCTATGAATGCTCTGATAAACTTGCATTTCAGCTCCCCTTGGGCTGCAACTGGAGGAATGGACCAGAAGCTCATCATTTGGGATCTTCGACAGTCGTCGCCGCGCAGTATATGCGAGCACGAGGTCTATTGTGAACAGATTTAAGTTTTTTAAAATAGTATTTAGTTCACGCTTCATCTTCACCAGTGTTTTAAAAAGCTCCATAAAGCCCCAAAAAGGCACAGAAAGGCGCAAGGCGCCATGCTTGCGCCTCGCCTTGCTCAGGCGCAGCGCATAAGATAAGGCGTGCGCCTTACCGGGCCTTTCCTCGAGGCTCCCTGGCGCAAAAGGCGCGCGCCTCAAGGGCTTTTTCTTTTCTTTTTTTTTACATCCTCAAAATGTAACCAAACCAAAGAAAGAAGAAGAAGAAGATGATGAAATGTCATAAGGAAGAAGATGAAGTGAAAAGTAAGTTTTGTATAAAATAAAAGAAAATAGAAAGGTGACGTTGATGGAAATTATTGATTTGACCACTCACAATTAATACATATTTGATTCAAATAGAATTTATTTACATTTAAAATTTGATATTTCTCTCCATTCTTTCCATAGTTGTTTAATTTACTTAATTAAATATTATCATTATGACCTATTTTCATTAGATACCATTTTAACCAAAATATTATTATTAAGATGTCTTTCACAATTTTCAACTAAAATTTTATTTATTATATATTTAAAATTTCAATGTACAATATATTATATACGTATTAATAAATATTTTATTTATTATGTGTCCCCTTCTTTTATATGTCTTTTTGTTTTGAACTAAATTTAATAGTTATTGAACTTATTTACTTATTGCTTTTATATTTTATTGGATATTTTAAACTTTAGAGACTTAATTGATGTTTTTATAATTTAATAGATTAACATATATGTTTTGTGGTAAATATAATTTTTCAAAATATTTTTTTATATATGGTGCGCCTAGAATATAAAGCCCGCGCCTTTTTTGCGCCTTGCGCCTTAGGCTCCAGAGAGCCTTTGCGCCTTTAAAAACACTTATCTTCACAATCCTTCTTTGTATAGTTTGTTTGTGGTTGGATTAGACTTGTTTAAGCAAAATCACACCTTCCTTTCCTATTTTGTACAGGATGGAGTTGCATGTCTAACTTGGATTGGCCTGTCAAGATACCTTGCAACCGGGTGCGTCGATGGTCGAGTACGAATATGGGATAGTCTCTCTGGTCAATGTGTTAAAACCTTTACTGGACACTCTGATGCCATTCAATCTCTGTCGGTATCAGCTAATCATGAGTACCTTGTTTCTGTTGCTCTCGATAATACGGCTCGAGTTTTTGAGATTGCGGAGTATTGTTAAGTAGGATCTTGATTCTTAACTTCAATGATCCTCTTTATCGATTTTTGCTAAATTATGTAAGATTATACGTTTTGAGAGTTTGTATTTGTCTATACAGGTAATGCTTGGAGAGTGCTTTTCTAAAATTTTTGGTTGACTTGAGTTATTGTTCTTGGCAAGTTTATTATGTTGAATTCTGATGATGTTGCTTTGATACCATGTTGAATTATGG

mRNA sequence

GTGTAATTACTTGCTCTGTGGCGGGCTACTCGAAACATATCTTTTGAAGTTATCTATCCCTCAAGCTGCCCGCGCGCCGGCGGCGCGACTACAACTCCGGCGACACTCATACGGCGGCGAAAACACTTCCAAGAACAGCGAGTTTCCATTGCGGCGATCCGGAACAAGGCGACTATAATCGCTGCGTTAGCTTGGTTCGGACTCGAATCAGTACACTCCAAGAAATCGCAATTCCAACTGCTCTAGGTTTCGTACGGATATAGAGCTATGAATACTCCAGCTTCACATGAAGAGGAAGATGATCATGGTGATGTTTTCCTCGATGAATCTGACATAATCCAGGAAGTTGTGGTTGACGATGAAGATCTTCCTGATGCTGTTGATGAAGAAGGCTCTGATGATGAATTTGTTGGTAATGATGAGGGTGATGATTCAGTCCATACTTTTACCGGTCATACTGGTGAGGTTTACACGGTGGCTTGTAGTCCAATAGATGCCGTCTTAGTTGCAACAGGTGGTGGAGATGACAAAGGATTTATGTGGAAGATTGGCAGAGGAGATTTTAATCAGGAACTTACTGGTCACAAAGATTCTGTGTCTAGTCTATCGTTTAGTGCTGACGGACAATTACTGGCATCAGGGAGTTTTGATGGACTGATCCAAATTTGGGATATTTCATCGGGCAATCTTAAATGCACACTTGAAGGCCCTGGAGGAGGAATTGAGTGGGTAAGGTGGCACCCGAGAGGTCATCTGGTTTTAGCTGGTTCTGAGGATTCCGCCGCTTGGATGTGGAATGCTGATAAAGGTGTCTATCTTAATATATTTTCTGGTCACGGTGCTAGTGTTACTTGCGGTGATTTTACCCCTGATGGTAAAATGGTTTGCACGGGCTCGGATGATGCAACAATGAGGATATGGAATCCAAGAAGTGGTGAAAATATTCATGTTGTGAGGGGTCATCCTTATCACACTGAAGGATTGACTTCCCTAGCACTCAGTTCTGATTCAACCCTTGCTCTTTCTGGTTCAAAAGATGGTTCTGTTCATATCGTGAATATAGCAACTGGAAAGGTAGTAAATTCTTTGGTTTCCCATTCAGACTCAATCGAGTGCATTGGTCTAGCACCAAGCTCCCCTTGGGCTGCAACTGGAGGAATGGACCAGAAGCTCATCATTTGGGATCTTCGACAGTCGTCGCCGCGCAGTATATGCGAGCACGAGGATGGAGTTGCATGTCTAACTTGGATTGGCCTGTCAAGATACCTTGCAACCGGGTGCGTCGATGGTCGAGTACGAATATGGGATAGTCTCTCTGGTCAATGTGTTAAAACCTTTACTGGACACTCTGATGCCATTCAATCTCTGTCGGTATCAGCTAATCATGAGTACCTTGTTTCTGTTGCTCTCGATAATACGGCTCGAGTTTTTGAGATTGCGGAGTATTGTTAAGTAGGATCTTGATTCTTAACTTCAATGATCCTCTTTATCGATTTTTGCTAAATTATGTAAGATTATACGTTTTGAGAGTTTGTATTTGTCTATACAGGTAATGCTTGGAGAGTGCTTTTCTAAAATTTTTGGTTGACTTGAGTTATTGTTCTTGGCAAGTTTATTATGTTGAATTCTGATGATGTTGCTTTGATACCATGTTGAATTATGG

Coding sequence (CDS)

ATGAATACTCCAGCTTCACATGAAGAGGAAGATGATCATGGTGATGTTTTCCTCGATGAATCTGACATAATCCAGGAAGTTGTGGTTGACGATGAAGATCTTCCTGATGCTGTTGATGAAGAAGGCTCTGATGATGAATTTGTTGGTAATGATGAGGGTGATGATTCAGTCCATACTTTTACCGGTCATACTGGTGAGGTTTACACGGTGGCTTGTAGTCCAATAGATGCCGTCTTAGTTGCAACAGGTGGTGGAGATGACAAAGGATTTATGTGGAAGATTGGCAGAGGAGATTTTAATCAGGAACTTACTGGTCACAAAGATTCTGTGTCTAGTCTATCGTTTAGTGCTGACGGACAATTACTGGCATCAGGGAGTTTTGATGGACTGATCCAAATTTGGGATATTTCATCGGGCAATCTTAAATGCACACTTGAAGGCCCTGGAGGAGGAATTGAGTGGGTAAGGTGGCACCCGAGAGGTCATCTGGTTTTAGCTGGTTCTGAGGATTCCGCCGCTTGGATGTGGAATGCTGATAAAGGTGTCTATCTTAATATATTTTCTGGTCACGGTGCTAGTGTTACTTGCGGTGATTTTACCCCTGATGGTAAAATGGTTTGCACGGGCTCGGATGATGCAACAATGAGGATATGGAATCCAAGAAGTGGTGAAAATATTCATGTTGTGAGGGGTCATCCTTATCACACTGAAGGATTGACTTCCCTAGCACTCAGTTCTGATTCAACCCTTGCTCTTTCTGGTTCAAAAGATGGTTCTGTTCATATCGTGAATATAGCAACTGGAAAGGTAGTAAATTCTTTGGTTTCCCATTCAGACTCAATCGAGTGCATTGGTCTAGCACCAAGCTCCCCTTGGGCTGCAACTGGAGGAATGGACCAGAAGCTCATCATTTGGGATCTTCGACAGTCGTCGCCGCGCAGTATATGCGAGCACGAGGATGGAGTTGCATGTCTAACTTGGATTGGCCTGTCAAGATACCTTGCAACCGGGTGCGTCGATGGTCGAGTACGAATATGGGATAGTCTCTCTGGTCAATGTGTTAAAACCTTTACTGGACACTCTGATGCCATTCAATCTCTGTCGGTATCAGCTAATCATGAGTACCTTGTTTCTGTTGCTCTCGATAATACGGCTCGAGTTTTTGAGATTGCGGAGTATTGTTAA

Protein sequence

MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTFTGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQLLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADKGVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQKLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGHSDAIQSLSVSANHEYLVSVALDNTARVFEIAEYC

Homology

[Close]

BLAST of Sed0004416.1 vs. NCBI nr
Match: KAG6581658.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 760.0 bits (1961), Expect = 1.0e-215
Identity = 365/393 (92.88%), Postives = 381/393 (96.95%), Query Frame = 0


Query: 1    MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
            MN PASHEEE+DHG+VFLDESDIIQEVV+DDEDLP AVDEEGSDDEFV  D+ DDSVHTF
Sbjct: 681  MNAPASHEEEEDHGEVFLDESDIIQEVVIDDEDLPHAVDEEGSDDEFV--DDADDSVHTF 740

Query: 61   TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
            TGHTGEVYTVACSPIDA+LVATGGGDDKGFMWKIGRGDF QELTGHKDSVSSL+FSADGQ
Sbjct: 741  TGHTGEVYTVACSPIDAMLVATGGGDDKGFMWKIGRGDFAQELTGHKDSVSSLAFSADGQ 800

Query: 121  LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
            LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS  WMWNAD+
Sbjct: 801  LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTVWMWNADR 860

Query: 181  GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
            GVYLN+FSGHGASVTCGDFTPDGK++CTGSDDATMRIWNP+SGENIHVVRGHPYHTEGLT
Sbjct: 861  GVYLNMFSGHGASVTCGDFTPDGKIICTGSDDATMRIWNPKSGENIHVVRGHPYHTEGLT 920

Query: 241  SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
            +LALSSDSTLALSGS DGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 921  ALALSSDSTLALSGSNDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 980

Query: 301  KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
            KLIIWDLRQSSPRSICEHEDGV CLTWIG SRY+ATGCVDGRVRIWDSL G+CV+TFTGH
Sbjct: 981  KLIIWDLRQSSPRSICEHEDGVTCLTWIGTSRYVATGCVDGRVRIWDSLLGECVRTFTGH 1040

Query: 361  SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
            +DAIQSLSVSANHEYLVSVALDNTARVFEIAEY
Sbjct: 1041 TDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 1071

[Close]

BLAST of Sed0004416.1 vs. NCBI nr
Match: XP_022930566.1 (angio-associated migratory cell protein [Cucurbita moschata] >XP_022930567.1 angio-associated migratory cell protein [Cucurbita moschata] >KAG7018151.1 Angio-associated migratory cell protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 758.4 bits (1957), Expect = 3.0e-215
Identity = 364/393 (92.62%), Postives = 380/393 (96.69%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           MN PASHEEE+DHG+VFLDESDIIQEVV+DDEDLP AVDEEGSDDEFV  D+ DDSVHTF
Sbjct: 1   MNAPASHEEEEDHGEVFLDESDIIQEVVIDDEDLPHAVDEEGSDDEFV--DDADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACSPIDA+LVATGGGDDKGFMWKIGRGDF QELTGHKDSVSSL+FSADGQ
Sbjct: 61  TGHTGEVYTVACSPIDAMLVATGGGDDKGFMWKIGRGDFAQELTGHKDSVSSLAFSADGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS  WMWNAD+
Sbjct: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTVWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLN+FSGHGASVTCGDFTPDGK++CTGSDDATMRIWNP+SGENIHVVRGHPYHTEGLT
Sbjct: 181 GVYLNMFSGHGASVTCGDFTPDGKIICTGSDDATMRIWNPKSGENIHVVRGHPYHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           +LALSSDSTLALSGS DGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 ALALSSDSTLALSGSNDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLRQSSPRSICEHEDGV CLTWIG SRY+ TGCVDGRVRIWDSL G+CV+TFTGH
Sbjct: 301 KLIIWDLRQSSPRSICEHEDGVTCLTWIGTSRYVVTGCVDGRVRIWDSLLGECVRTFTGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           +DAIQSLSVSANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 TDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. NCBI nr
Match: XP_023528021.1 (angio-associated migratory cell protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 758.4 bits (1957), Expect = 3.0e-215
Identity = 364/393 (92.62%), Postives = 380/393 (96.69%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           MN PASHEEE+DHG+VFLDESDIIQEVV+DDEDLP AVDEEGSDDEFV  D+ DDSVHTF
Sbjct: 1   MNAPASHEEEEDHGEVFLDESDIIQEVVIDDEDLPHAVDEEGSDDEFV--DDADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACSPIDA+LVATGGGDDKGFMWKIGRGDF QELTGHKDSVSSL+FSADGQ
Sbjct: 61  TGHTGEVYTVACSPIDAMLVATGGGDDKGFMWKIGRGDFAQELTGHKDSVSSLAFSADGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS  WMWNAD+
Sbjct: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTVWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLN+FSGHGASVTCGDFTPDGK++CTGSDDATMRIWNP+SGENIHVVRGHPYHTEGLT
Sbjct: 181 GVYLNMFSGHGASVTCGDFTPDGKIICTGSDDATMRIWNPKSGENIHVVRGHPYHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           +LALSSDSTLALSGS DGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 ALALSSDSTLALSGSNDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLRQSSPRSICEHEDGV CLTWIG SRY+ TGCVDGRVRIWDSL G+CV+TFTGH
Sbjct: 301 KLIIWDLRQSSPRSICEHEDGVTCLTWIGTSRYVVTGCVDGRVRIWDSLVGECVRTFTGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           +DAIQSLSVSANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 TDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. NCBI nr
Match: XP_022980646.1 (angio-associated migratory cell protein [Cucurbita maxima] >XP_022980647.1 angio-associated migratory cell protein [Cucurbita maxima])

HSP 1 Score: 756.9 bits (1953), Expect = 8.6e-215
Identity = 363/393 (92.37%), Postives = 379/393 (96.44%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           MN PASHEEE+DHG+VFLDESDIIQEVV+DDEDLP AVDEEGSDDEFV  D+ DDSVHTF
Sbjct: 1   MNAPASHEEEEDHGEVFLDESDIIQEVVIDDEDLPHAVDEEGSDDEFV--DDADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACSPIDA+LVATGGGDDKGFMWKIGRGDF QELTGHKDSVSSL+FSADGQ
Sbjct: 61  TGHTGEVYTVACSPIDAMLVATGGGDDKGFMWKIGRGDFAQELTGHKDSVSSLAFSADGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASG FDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS  WMWNAD+
Sbjct: 121 LLASGGFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTVWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLN+FSGHGASVTCGDFTPDGK++CTGSDDATMRIWNP+SGENIHVVRGHPYHTEGLT
Sbjct: 181 GVYLNMFSGHGASVTCGDFTPDGKIICTGSDDATMRIWNPKSGENIHVVRGHPYHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           +LALSSDSTLALSGS DGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 ALALSSDSTLALSGSNDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLRQSSPRSICEHEDGV CLTWIG SRY+ TGCVDGRVRIWDSL G+CV+TFTGH
Sbjct: 301 KLIIWDLRQSSPRSICEHEDGVTCLTWIGTSRYVVTGCVDGRVRIWDSLLGECVRTFTGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           +DAIQSLSVSANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 TDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. NCBI nr
Match: XP_022155468.1 (angio-associated migratory cell protein-like isoform X1 [Momordica charantia])

HSP 1 Score: 750.7 bits (1937), Expect = 6.2e-213
Identity = 361/393 (91.86%), Postives = 376/393 (95.67%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           M+ PASHEEEDDHG+VFLDESDII+EVVVD+EDLPDA DEEGSDDEFV  DE DDSVHTF
Sbjct: 1   MHIPASHEEEDDHGEVFLDESDIIEEVVVDEEDLPDAADEEGSDDEFV--DEADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACSP+DA LVATGGGDDKGFMWKIGRGDF QEL+GHKDSVSSL+FS DGQ
Sbjct: 61  TGHTGEVYTVACSPVDAALVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSTDGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS+ WMWNAD+
Sbjct: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSSVWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLNIFSGHGASVTCGDFTPDGKM+CTGSDDATMRIWNPRSGENIHV+RGHP HTEGLT
Sbjct: 181 GVYLNIFSGHGASVTCGDFTPDGKMICTGSDDATMRIWNPRSGENIHVMRGHPCHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           SLALSSDSTLA SGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 SLALSSDSTLAFSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLR S PR+ C HEDGV CLTWIG SRYLATGCVDGRVRIWDSLSG+CV+TFTGH
Sbjct: 301 KLIIWDLRHSLPRTTCMHEDGVTCLTWIGTSRYLATGCVDGRVRIWDSLSGECVRTFTGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           SDAIQSLS+SANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 SDAIQSLSISANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. ExPASy Swiss-Prot
Match: Q3SZK1 (Angio-associated migratory cell protein OS=Bos taurus OX=9913 GN=AAMP PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 7.2e-63
Identity = 137/394 (34.77%), Postives = 209/394 (53.05%), Query Frame = 0


Query: 19  DESDIIQEVVVDDEDLPDAVDEEGSDDEF--------VGNDEG-DDSVHTFTGHTGEVYT 78
           D  D++QE  ++D D  +  +EEG+++ +        VG+ EG DDS  TF  H+  V+ 
Sbjct: 39  DPDDLVQE--MEDVDFEEEEEEEGNEEGWVLEPQEGVVGSMEGPDDSEVTFALHSASVFC 98

Query: 79  VACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQLLASGSFDG 138
           V+  P    L  TGG DDK F+W++  G+   E  GHKDSV+   FS D  L+A+G   G
Sbjct: 99  VSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSG 158

Query: 139 LIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADKGVYLNIFSG 198
           L+++W + +     + E   G +EW+ WHPR  ++LAG+ D   WMW    G     F G
Sbjct: 159 LLKVWQVDTKEEVWSFE--AGDLEWMEWHPRAPVLLAGTADGNTWMWKVPTG-DCKTFQG 218

Query: 199 HGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALSSDST 258
                TCG   PDGK    G +D T+RIW+ + G +IHV++G   H   LT +A + D +
Sbjct: 219 PNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPLTCVATNQDGS 278

Query: 259 LALSGSKDGSVHIVNIATGKVVNSL---------------VSHSDSIECIGLAPSSPWAA 318
           L L+GS D    +V+  TGKVV                   S S+S+E +G     P AA
Sbjct: 279 LILTGSVDCQAKLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAA 338

Query: 319 TGGMDQKLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCV 378
            G +D  L I+DL   + R  C+H+ G+  L W   +  + T  +DG VR+WD+ +G+ +
Sbjct: 339 VGYLDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLL 398

Query: 379 KTFTGHSDAIQSLSVSANHEYLVSVALDNTARVF 389
             + GH+  I   ++S +   +V+ + D+ A+VF
Sbjct: 399 TDYRGHTAEILDFALSKDASLVVTTSGDHKAKVF 427

[Close]

BLAST of Sed0004416.1 vs. ExPASy Swiss-Prot
Match: Q13685 (Angio-associated migratory cell protein OS=Homo sapiens OX=9606 GN=AAMP PE=1 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 3.6e-62
Identity = 137/394 (34.77%), Postives = 207/394 (52.54%), Query Frame = 0


Query: 19  DESDIIQEVVVDDEDLPDAVDEEGSDDEF--------VGNDEG-DDSVHTFTGHTGEVYT 78
           D  D+ QE  ++D D  +  +EEG+++ +        VG+ EG DDS  TF  H+  V+ 
Sbjct: 39  DPDDLAQE--MEDVDFEEEEEEEGNEEGWVLEPQEGVVGSMEGPDDSEVTFALHSASVFC 98

Query: 79  VACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQLLASGSFDG 138
           V+  P    L  TGG DDK F+W++  G+   E  GHKDSV+   FS D  L+A+G   G
Sbjct: 99  VSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSG 158

Query: 139 LIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADKGVYLNIFSG 198
           L+++W + +     + E   G +EW+ WHPR  ++LAG+ D   WMW    G     F G
Sbjct: 159 LLKVWQVDTKEEVWSFE--AGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNG-DCKTFQG 218

Query: 199 HGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALSSDST 258
                TCG   PDGK    G +D T+RIW+ + G  IHV++G   H   LT +A + D +
Sbjct: 219 PNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGS 278

Query: 259 LALSGSKDGSVHIVNIATGKVVNSL---------------VSHSDSIECIGLAPSSPWAA 318
           L L+GS D    +V+  TGKVV                   S S+S+E +G     P AA
Sbjct: 279 LILTGSVDCQAKLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAA 338

Query: 319 TGGMDQKLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCV 378
            G +D  L I+DL   + R  C+H+ G+  L W   +  + T  +DG VR+WD+ +G+ +
Sbjct: 339 VGYLDGTLAIYDLATQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLL 398

Query: 379 KTFTGHSDAIQSLSVSANHEYLVSVALDNTARVF 389
             + GH+  I   ++S +   +V+ + D+ A+VF
Sbjct: 399 TDYRGHTAEILDFALSKDASLVVTTSGDHKAKVF 427

[Close]

BLAST of Sed0004416.1 vs. ExPASy Swiss-Prot
Match: Q5RCG7 (Angio-associated migratory cell protein OS=Pongo abelii OX=9601 GN=AAMP PE=2 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 3.6e-62
Identity = 137/394 (34.77%), Postives = 207/394 (52.54%), Query Frame = 0


Query: 19  DESDIIQEVVVDDEDLPDAVDEEGSDDEF--------VGNDEG-DDSVHTFTGHTGEVYT 78
           D  D+ QE  ++D D  +  +EEG+++ +        VG+ EG DDS  TF  H+  V+ 
Sbjct: 39  DPDDLAQE--MEDVDFEEEEEEEGNEEGWVLEPQEGVVGSMEGPDDSEVTFALHSASVFC 98

Query: 79  VACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQLLASGSFDG 138
           V+  P    L  TGG DDK F+W++  G+   E  GHKDSV+   FS D  L+A+G   G
Sbjct: 99  VSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSG 158

Query: 139 LIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADKGVYLNIFSG 198
           L+++W + +     + E   G +EW+ WHPR  ++LAG+ D   WMW    G     F G
Sbjct: 159 LLKVWQVDTKEEVWSFE--AGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNG-DCKTFQG 218

Query: 199 HGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALSSDST 258
                TCG   PDGK    G +D T+RIW+ + G  IHV++G   H   LT +A + D +
Sbjct: 219 PNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGS 278

Query: 259 LALSGSKDGSVHIVNIATGKVVNSL---------------VSHSDSIECIGLAPSSPWAA 318
           L L+GS D    +V+  TGKVV                   S S+S+E +G     P AA
Sbjct: 279 LILTGSVDCQAKLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAA 338

Query: 319 TGGMDQKLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCV 378
            G +D  L I+DL   + R  C+H+ G+  L W   +  + T  +DG VR+WD+ +G+ +
Sbjct: 339 VGYLDGTLAIYDLATQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLL 398

Query: 379 KTFTGHSDAIQSLSVSANHEYLVSVALDNTARVF 389
             + GH+  I   ++S +   +V+ + D+ A+VF
Sbjct: 399 TDYRGHTAEILDFALSKDASLVVTTSGDHKAKVF 427

[Close]

BLAST of Sed0004416.1 vs. ExPASy Swiss-Prot
Match: Q7YR70 (Angio-associated migratory cell protein OS=Canis lupus familiaris OX=9615 GN=AAMP PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61
Identity = 137/395 (34.68%), Postives = 205/395 (51.90%), Query Frame = 0


Query: 19  DESDIIQEVVVDDEDLPDAVDEEGSDDE---------FVGNDEG-DDSVHTFTGHTGEVY 78
           D  D+ QE  ++D D  +  +EE  ++E          VG+ EG DDS  TF  H+  V+
Sbjct: 39  DPDDLAQE--MEDVDFEEEEEEEEGNEEGWVLEPQEGVVGSMEGPDDSEVTFALHSASVF 98

Query: 79  TVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQLLASGSFD 138
            V+  P    L  TGG DDK F+W++  G+   E  GHKDSV+   FS D  L+A+G   
Sbjct: 99  CVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMS 158

Query: 139 GLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADKGVYLNIFS 198
           GL+++W + +     + E   G +EW+ WHPR  ++LAG+ D   WMW    G     F 
Sbjct: 159 GLLKVWQVDTKEEVWSFE--AGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNG-DCKTFQ 218

Query: 199 GHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALSSDS 258
           G     TCG   PDGK    G +D T+RIW+ + G  IHV++G   H   LT +A + D 
Sbjct: 219 GPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDG 278

Query: 259 TLALSGSKDGSVHIVNIATGKVVNSL---------------VSHSDSIECIGLAPSSPWA 318
           +L L+GS D    +V+  TGKVV                   S S+S+E +G     P A
Sbjct: 279 SLILTGSVDCQAQLVSATTGKVVGVFRPETVASQPNVGEGEESESNSVESLGFCSVMPLA 338

Query: 319 ATGGMDQKLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQC 378
           A G +D  L I+DL   + R  C+H+ G+  L W   +  + T  +DG VR+WD+ +G+ 
Sbjct: 339 AVGYLDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRL 398

Query: 379 VKTFTGHSDAIQSLSVSANHEYLVSVALDNTARVF 389
           +  + GH+  I   ++S +   +V+ + D+ A+VF
Sbjct: 399 LTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVF 428

[Close]

BLAST of Sed0004416.1 vs. ExPASy Swiss-Prot
Match: O13982 (Uncharacterized WD repeat-containing protein C25H1.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC25H1.08c PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.7e-52
Identity = 120/395 (30.38%), Postives = 207/395 (52.41%), Query Frame = 0


Query: 9   EEDDHGDVFLDESDIIQEVVVDDEDLPD-AVDEEGSDDE---FVGNDEGDDSVHTFTGHT 68
           EE+++ ++++ E++ ++EV+ D++ L D  V E+ ++ E    + N   D SV  F  H 
Sbjct: 3   EEEENQELYIAENE-VEEVIKDNDKLMDQGVTEDEAEQEQNDTMNNMVMDMSVQGFFEHK 62

Query: 69  GEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQLLAS 128
             V++V+ +P+ + L A+GGGDD G++W I  G+   +LTGHKDS+ ++ +S DG  +A+
Sbjct: 63  DSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYIAT 122

Query: 129 GSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADKGVYL 188
           G  D  +++W  S+G    T       I W+ WHP+G  + AG  D + WMW+   G  +
Sbjct: 123 GGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVV 182

Query: 189 NIFSGHGASVTCGDFTPD--GKMVCTGSDDATMRIWNPRSG--------ENIHVVRGHPY 248
            +  GH A V  G F P   GK + T  D  T+ +WNP +G        ++     G+  
Sbjct: 183 QVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATGAPECRMSSDDHRFDPGNEE 242

Query: 249 HTEGLTSLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAA 308
              G TS   +++  +   G   G V +VNI +  ++ SL + ++S+E I L  + P  A
Sbjct: 243 TAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSSHILASLEAQTESVEAIALCTALPICA 302

Query: 309 TGGMDQKLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCV 368
              +D  + ++D      R    HE  V    ++  + YL T C D  +R WD  SGQ +
Sbjct: 303 CASVDGTVALYDSASLKFRKSLPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLL 362

Query: 369 KTFTGHSDAIQSLSVSANHEYLVSVALDNTARVFE 390
             +TGH + I  ++++ + + +V+ + D    VF+
Sbjct: 363 GEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396

[Close]

BLAST of Sed0004416.1 vs. ExPASy TrEMBL
Match: A0A6J1EQW6 (angio-associated migratory cell protein OS=Cucurbita moschata OX=3662 GN=LOC111436976 PE=4 SV=1)

HSP 1 Score: 758.4 bits (1957), Expect = 1.4e-215
Identity = 364/393 (92.62%), Postives = 380/393 (96.69%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           MN PASHEEE+DHG+VFLDESDIIQEVV+DDEDLP AVDEEGSDDEFV  D+ DDSVHTF
Sbjct: 1   MNAPASHEEEEDHGEVFLDESDIIQEVVIDDEDLPHAVDEEGSDDEFV--DDADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACSPIDA+LVATGGGDDKGFMWKIGRGDF QELTGHKDSVSSL+FSADGQ
Sbjct: 61  TGHTGEVYTVACSPIDAMLVATGGGDDKGFMWKIGRGDFAQELTGHKDSVSSLAFSADGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS  WMWNAD+
Sbjct: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTVWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLN+FSGHGASVTCGDFTPDGK++CTGSDDATMRIWNP+SGENIHVVRGHPYHTEGLT
Sbjct: 181 GVYLNMFSGHGASVTCGDFTPDGKIICTGSDDATMRIWNPKSGENIHVVRGHPYHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           +LALSSDSTLALSGS DGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 ALALSSDSTLALSGSNDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLRQSSPRSICEHEDGV CLTWIG SRY+ TGCVDGRVRIWDSL G+CV+TFTGH
Sbjct: 301 KLIIWDLRQSSPRSICEHEDGVTCLTWIGTSRYVVTGCVDGRVRIWDSLLGECVRTFTGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           +DAIQSLSVSANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 TDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. ExPASy TrEMBL
Match: A0A6J1IRV7 (angio-associated migratory cell protein OS=Cucurbita maxima OX=3661 GN=LOC111479949 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.2e-215
Identity = 363/393 (92.37%), Postives = 379/393 (96.44%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           MN PASHEEE+DHG+VFLDESDIIQEVV+DDEDLP AVDEEGSDDEFV  D+ DDSVHTF
Sbjct: 1   MNAPASHEEEEDHGEVFLDESDIIQEVVIDDEDLPHAVDEEGSDDEFV--DDADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACSPIDA+LVATGGGDDKGFMWKIGRGDF QELTGHKDSVSSL+FSADGQ
Sbjct: 61  TGHTGEVYTVACSPIDAMLVATGGGDDKGFMWKIGRGDFAQELTGHKDSVSSLAFSADGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASG FDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS  WMWNAD+
Sbjct: 121 LLASGGFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTVWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLN+FSGHGASVTCGDFTPDGK++CTGSDDATMRIWNP+SGENIHVVRGHPYHTEGLT
Sbjct: 181 GVYLNMFSGHGASVTCGDFTPDGKIICTGSDDATMRIWNPKSGENIHVVRGHPYHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           +LALSSDSTLALSGS DGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 ALALSSDSTLALSGSNDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLRQSSPRSICEHEDGV CLTWIG SRY+ TGCVDGRVRIWDSL G+CV+TFTGH
Sbjct: 301 KLIIWDLRQSSPRSICEHEDGVTCLTWIGTSRYVVTGCVDGRVRIWDSLLGECVRTFTGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           +DAIQSLSVSANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 TDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. ExPASy TrEMBL
Match: A0A6J1DN15 (angio-associated migratory cell protein-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022602 PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 3.0e-213
Identity = 361/393 (91.86%), Postives = 376/393 (95.67%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           M+ PASHEEEDDHG+VFLDESDII+EVVVD+EDLPDA DEEGSDDEFV  DE DDSVHTF
Sbjct: 1   MHIPASHEEEDDHGEVFLDESDIIEEVVVDEEDLPDAADEEGSDDEFV--DEADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACSP+DA LVATGGGDDKGFMWKIGRGDF QEL+GHKDSVSSL+FS DGQ
Sbjct: 61  TGHTGEVYTVACSPVDAALVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSTDGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS+ WMWNAD+
Sbjct: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSSVWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLNIFSGHGASVTCGDFTPDGKM+CTGSDDATMRIWNPRSGENIHV+RGHP HTEGLT
Sbjct: 181 GVYLNIFSGHGASVTCGDFTPDGKMICTGSDDATMRIWNPRSGENIHVMRGHPCHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           SLALSSDSTLA SGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 SLALSSDSTLAFSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLR S PR+ C HEDGV CLTWIG SRYLATGCVDGRVRIWDSLSG+CV+TFTGH
Sbjct: 301 KLIIWDLRHSLPRTTCMHEDGVTCLTWIGTSRYLATGCVDGRVRIWDSLSGECVRTFTGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           SDAIQSLS+SANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 SDAIQSLSISANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. ExPASy TrEMBL
Match: A0A1S3CIC4 (angio-associated migratory cell protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501304 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 6.9e-210
Identity = 355/393 (90.33%), Postives = 374/393 (95.17%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           M+   SHEEEDDHG+VFLDE+DII EV VD+EDLPDAVDEEGSDDE+   DE DDSVHTF
Sbjct: 1   MSISGSHEEEDDHGEVFLDEADIIHEVPVDEEDLPDAVDEEGSDDEYF--DEADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTV CSPIDA LVATGGGDDKGFMWKIGRGDF QEL+GHKDSVSSL+FSADGQ
Sbjct: 61  TGHTGEVYTVVCSPIDATLVATGGGDDKGFMWKIGRGDFAQELSGHKDSVSSLAFSADGQ 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASGSFDG+IQIWD SSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDS AWMWNAD+
Sbjct: 121 LLASGSFDGIIQIWDTSSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTAWMWNADR 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLNIFSGHGA+VTCGDFTPDGK++CTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT
Sbjct: 181 GVYLNIFSGHGATVTCGDFTPDGKIICTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           SLAL+SDSTLAL+GSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 SLALTSDSTLALTGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLRQS+PRS CEHEDGV CLTWIG SRYLATGCVDGRVRIWDSLSG+CVKTF+GH
Sbjct: 301 KLIIWDLRQSTPRSTCEHEDGVTCLTWIGTSRYLATGCVDGRVRIWDSLSGECVKTFSGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           SDAIQSL+V AN EYLVSVALDNTAR+FEIAEY
Sbjct: 361 SDAIQSLAVCANLEYLVSVALDNTARIFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. ExPASy TrEMBL
Match: A0A6J1DZJ4 (angio-associated migratory cell protein-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024531 PE=4 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 9.0e-210
Identity = 355/393 (90.33%), Postives = 374/393 (95.17%), Query Frame = 0


Query: 1   MNTPASHEEEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTF 60
           MN PASHEEEDD G+VFLDESDII+EV VD+EDLPDA DEEGSD+EFV  DE DDSVHTF
Sbjct: 1   MNIPASHEEEDDRGEVFLDESDIIEEVAVDEEDLPDAADEEGSDEEFV--DEADDSVHTF 60

Query: 61  TGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQ 120
           TGHTGEVYTVACS +DA LVATGGGDDKGFMWKI RGDF QEL+GHKDSVSSL+FS DG+
Sbjct: 61  TGHTGEVYTVACSXVDAALVATGGGDDKGFMWKISRGDFAQELSGHKDSVSSLAFSTDGK 120

Query: 121 LLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADK 180
           LLASGSFDGLIQIWDISSGNLKCTL+GPGGGIEWVRWHP+GHLVLAGSEDS+AWMWNA++
Sbjct: 121 LLASGSFDGLIQIWDISSGNLKCTLDGPGGGIEWVRWHPKGHLVLAGSEDSSAWMWNAER 180

Query: 181 GVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLT 240
           GVYLNIFSGHGASVTCGDFTPDGKM+CTGSDDATMRIWNPRSGENIHVVRGHPYHT+GLT
Sbjct: 181 GVYLNIFSGHGASVTCGDFTPDGKMICTGSDDATMRIWNPRSGENIHVVRGHPYHTQGLT 240

Query: 241 SLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300
           SLALS DSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ
Sbjct: 241 SLALSFDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGMDQ 300

Query: 301 KLIIWDLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGH 360
           KLIIWDLRQS PR+ C HEDGV CLTWIG SRYLATGCVDGRVRIWDSLSG+CV+TF GH
Sbjct: 301 KLIIWDLRQSLPRTTCVHEDGVXCLTWIGTSRYLATGCVDGRVRIWDSLSGECVRTFIGH 360

Query: 361 SDAIQSLSVSANHEYLVSVALDNTARVFEIAEY 394
           SDAIQSLS+SANHEYLVSVALDNTARVFEIAEY
Sbjct: 361 SDAIQSLSISANHEYLVSVALDNTARVFEIAEY 391

[Close]

BLAST of Sed0004416.1 vs. TAIR 10
Match: AT1G71840.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 569.3 bits (1466), Expect = 2.4e-162
Identity = 264/388 (68.04%), Postives = 326/388 (84.02%), Query Frame = 0


Query: 9   EEDDHGDVFLDESDIIQEVVVDDEDLPDAVDEEGSDDEFVGNDEGDDSVHTFTGHTGEVY 68
           EE+D G++FL ESD+++E+ VD+EDLP+A D++  DD+    DE DDSVHTFTGH GE+Y
Sbjct: 16  EEEDEGEIFLGESDVLREIDVDEEDLPEA-DDDDMDDDGEQFDENDDSVHTFTGHKGELY 75

Query: 69  TVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADGQLLASGSFD 128
            +ACSP DA LVATGGGDDK F+WKIG GD+  EL GHKDSVS L+FS DGQLLASG  D
Sbjct: 76  ALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLD 135

Query: 129 GLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNADKGVYLNIFS 188
           G++QI+D SSG LKC L+GPG GIEWVRWHPRGH+VLAGSED + WMWNADK  YLN+FS
Sbjct: 136 GVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFS 195

Query: 189 GHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALSSDS 248
           GH  +VTCGDFTPDGK++CTGSDDA++ +WNP++ E+IH+V+GHPYHTEGLT L ++S+S
Sbjct: 196 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNS 255

Query: 249 TLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSS---PWAATGGMDQKLIIW 308
           +LA+SGSKDGSVHIVNI TGKVV+SL SH+DS+EC+  +PSS   P AATGGMD+KLIIW
Sbjct: 256 SLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIW 315

Query: 309 DLRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIWDSLSGQCVKTFTGHSDAIQ 368
           DL+ S+PR ICEHE+GV  LTWIG S+YLATGC +G V IWDSL G CV T+ GH DA+Q
Sbjct: 316 DLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQ 375

Query: 369 SLSVSANHEYLVSVALDNTARVFEIAEY 394
           ++SVS N +++VSV++DNTARVFE +E+
Sbjct: 376 AISVSTNTDFIVSVSVDNTARVFESSEF 402

[Close]

BLAST of Sed0004416.1 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 4.5e-28
Identity = 79/296 (26.69%), Postives = 143/296 (48.31%), Query Frame = 0


Query: 103 LTGHKDSVSSLSFSADGQLLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGH 162
           L GH  ++S + FS DG LLAS S D  + +W  ++ +L    EG   GI  + W    H
Sbjct: 39  LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH 98

Query: 163 LVLAGSEDSAAWMWNADKGVY--LNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNP 222
              + S+D    +W+A +  Y  L +  GH   V C +F P   ++ +GS D T+RIW  
Sbjct: 99  YTCSASDDCTLRIWDA-RSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 158

Query: 223 RSGENIHVVRGHPYHTEGLTSLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLV-SHSD 282
           ++G+ + +++    H+  ++S+  + D +L +S S DGS  I +   G  + +L+   S 
Sbjct: 159 KTGKCVRMIKA---HSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSP 218

Query: 283 SIECIGLAPSSPWAATGGMDQKLIIWDLRQSSPRSI-CEHEDGVACLT---WIGLSRYLA 342
           ++     +P+  +     +D  L + +        +   H + V C+T    +   +Y+ 
Sbjct: 219 AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIV 278

Query: 343 TGCVDGRVRIWDSLSGQCVKTFTGHSDAIQSLSVSANHEYLVSVA--LDNTARVFE 390
           +G  D  V +WD  +   ++   GH+DA+ S+S       + S    LD T R+++
Sbjct: 279 SGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330

[Close]

BLAST of Sed0004416.1 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-27
Identity = 97/344 (28.20%), Postives = 164/344 (47.67%), Query Frame = 0


Query: 59  TFTGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSAD 118
           T  GH   V  V+ SP D   +A+G GD    +W +          GHK+ V ++++S D
Sbjct: 104 TIAGHAEAVLCVSFSP-DGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 163

Query: 119 GQLLASGSFDGLIQIWDISSGNLK-CTLEGPGGGIEWVRWHPRGHL------VLAGSEDS 178
           G+ L SGS  G I  W+   G L+   L G    I  + W P  HL       +  S+D 
Sbjct: 164 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP-VHLSSPCRRFVTSSKDG 223

Query: 179 AAWMWNADKGVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRG 238
            A +W+      +   SGH  +VTC  +  DG ++ TGS D T+++W    G+ I  ++G
Sbjct: 224 DARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKG 283

Query: 239 HPYHTEGLTSLALSSDSTLALSGSKD--GSVHIVNIATGKVVNSL-VSHSDSIECIGLAP 298
           H +    + SLALS++  L  +G+ D  G  +  N    K +     +  DS E +    
Sbjct: 284 HGH---WINSLALSTEYVLR-TGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERL---- 343

Query: 299 SSPWAATGGMDQKLIIWD--LRQSSPRSICEHEDGVACLTWIGLSRYLATGCVDGRVRIW 358
                 +G  D  + +W+  + +   + +  H+  V  + +    +++A+   D  VR+W
Sbjct: 344 -----VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW 403

Query: 359 DSLSGQCVKTFTGHSDAIQSLSVSANHEYLVSVALDNTARVFEI 391
           + ++GQ V  F GH   +  +S SA+   L+S + D+T +++EI
Sbjct: 404 NGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI 431

[Close]

BLAST of Sed0004416.1 vs. TAIR 10
Match: AT5G08390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-26
Identity = 66/249 (26.51%), Postives = 119/249 (47.79%), Query Frame = 0


Query: 60  FTGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDSVSSLSFSADG 119
           F  H+  V  +      + ++ TGG D K  +W IG+ +    L GH   + S++F A  
Sbjct: 12  FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE 71

Query: 120 QLLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSAAWMWNAD 179
            L+A+G+  G I++WD+    +  TL G       V +HP G    +GS D+   +W+  
Sbjct: 72  GLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR 131

Query: 180 KGVYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHVVRGHPYHTEG- 239
           K   ++ + GH   V    FTPDG+ + +G +D  +++W+  +G+ +H  + H    EG 
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH----EGK 191

Query: 240 LTSLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAPSSPWAATGGM 299
           + SL       L  +GS D +V   ++ T +++ S  + +  + C+   P       G  
Sbjct: 192 IQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQ 251

Query: 300 DQ-KLIIWD 307
           +  K+  W+
Sbjct: 252 ESLKIFSWE 256

[Close]

BLAST of Sed0004416.1 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 7.2e-26
Identity = 66/257 (25.68%), Postives = 124/257 (48.25%), Query Frame = 0


Query: 50  NDEGDDSVHTFTGHTGEVYTVACSPIDAVLVATGGGDDKGFMWKIGRGDFNQELTGHKDS 109
           ND   + V  FTGH   +  VA S  DA  + +   D    +W +  G   + L GH + 
Sbjct: 57  NDPIAEPVQEFTGHENGISDVAFSS-DARFIVSASDDKTLKLWDVETGSLIKTLIGHTNY 116

Query: 110 VSSLSFSADGQLLASGSFDGLIQIWDISSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSE 169
              ++F+    ++ SGSFD  ++IWD+++G     L      +  V ++  G L+++ S 
Sbjct: 117 AFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSY 176

Query: 170 DSAAWMWNADKG-VYLNIFSGHGASVTCGDFTPDGKMVCTGSDDATMRIWNPRSGENIHV 229
           D    +W++  G     +       V+   F+P+GK +  G+ D T+R+WN  S + +  
Sbjct: 177 DGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKT 236

Query: 230 VRGHPYHTEGLTSLALSSDSTLALSGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLAP 289
             GH      ++S    ++    +SGS+D  VH+  + + K++  L  H++++  +   P
Sbjct: 237 YTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHP 296

Query: 290 SSPWAATGGMDQKLIIW 306
           +    A+G +D+ + IW
Sbjct: 297 TENLIASGSLDKTVRIW 312

The following BLAST results are available for this feature:

BLAST of Sed0004416.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581658.1	1.0e-215	92.88	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022930566.1	3.0e-215	92.62	angio-associated migratory cell protein [Cucurbita moschata] >XP_022930567.1 ang...	[more]
XP_023528021.1	3.0e-215	92.62	angio-associated migratory cell protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022980646.1	8.6e-215	92.37	angio-associated migratory cell protein [Cucurbita maxima] >XP_022980647.1 angio...	[more]
XP_022155468.1	6.2e-213	91.86	angio-associated migratory cell protein-like isoform X1 [Momordica charantia]	[more]

BLAST of Sed0004416.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3SZK1	7.2e-63	34.77	Angio-associated migratory cell protein OS=Bos taurus OX=9913 GN=AAMP PE=2 SV=1	[more]
Q13685	3.6e-62	34.77	Angio-associated migratory cell protein OS=Homo sapiens OX=9606 GN=AAMP PE=1 SV=...	[more]
Q5RCG7	3.6e-62	34.77	Angio-associated migratory cell protein OS=Pongo abelii OX=9601 GN=AAMP PE=2 SV=...	[more]
Q7YR70	1.4e-61	34.68	Angio-associated migratory cell protein OS=Canis lupus familiaris OX=9615 GN=AAM...	[more]
O13982	5.7e-52	30.38	Uncharacterized WD repeat-containing protein C25H1.08c OS=Schizosaccharomyces po...	[more]

BLAST of Sed0004416.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQW6	1.4e-215	92.62	angio-associated migratory cell protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1IRV7	4.2e-215	92.37	angio-associated migratory cell protein OS=Cucurbita maxima OX=3661 GN=LOC111479...	[more]
A0A6J1DN15	3.0e-213	91.86	angio-associated migratory cell protein-like isoform X1 OS=Momordica charantia O...	[more]
A0A1S3CIC4	6.9e-210	90.33	angio-associated migratory cell protein isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1DZJ4	9.0e-210	90.33	angio-associated migratory cell protein-like isoform X2 OS=Momordica charantia O...	[more]

BLAST of Sed0004416.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71840.1	2.4e-162	68.04	transducin family protein / WD-40 repeat family protein	[more]
AT4G02730.1	4.5e-28	26.69	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G52820.1	8.5e-27	28.20	WD-40 repeat family protein / notchless protein, putative	[more]
AT5G08390.1	3.2e-26	26.51	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	7.2e-26	25.68	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 206..220 score: 33.3 coord: 122..136 score: 42.03 coord: 334..348 score: 35.53
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 309..347 e-value: 5.5E-7 score: 39.2 coord: 96..135 e-value: 3.2E-10 score: 49.9 coord: 53..93 e-value: 0.0023 score: 27.2 coord: 267..306 e-value: 1.7E-5 score: 34.2 coord: 138..177 e-value: 3.5E-4 score: 29.9 coord: 222..264 e-value: 0.0039 score: 26.4 coord: 180..219 e-value: 1.6E-8 score: 44.3 coord: 350..389 e-value: 1.2E-7 score: 41.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 56..88 e-value: 0.062 score: 14.2 coord: 223..262 e-value: 9.7E-5 score: 23.1 coord: 100..135 e-value: 1.7E-8 score: 35.0 coord: 184..219 e-value: 1.7E-7 score: 31.8 coord: 269..306 e-value: 6.8E-5 score: 23.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 274..315 score: 12.01227
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 357..394 score: 10.408196
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 145..186 score: 9.171722
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 187..228 score: 15.755108
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 103..144 score: 18.094381
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 232..273 score: 9.505904
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 315..356 score: 12.780889
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 53..392 e-value: 1.1E-98 score: 332.6
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 314..368 e-value: 2.3E-5 score: 24.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..51
None	No IPR available	PANTHER	PTHR19857	MITOCHONDRIAL DIVISION PROTEIN 1-RELATED	coord: 4..392
None	No IPR available	PANTHER	PTHR19857:SF8	MITOCHONDRIAL DIVISION PROTEIN 1-RELATED	coord: 4..392
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 187..224 score: 11.998316
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 274..308 score: 9.651964
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 315..347 score: 9.783781
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 103..140 score: 14.450121
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 357..394 score: 10.07378
None	No IPR available	CDD	cd00200	WD40	coord: 101..389 e-value: 1.56957E-74 score: 231.84
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 122..136
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 293..307
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 54..380

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0004416	Sed0004416	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004416.1-five_prime_utr	Sed0004416.1-five_prime_utr-LG12:6900353..6900580	five_prime_UTR
Sed0004416.1-five_prime_utr	Sed0004416.1-five_prime_utr-LG12:6901228..6901266	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6900353..6900580	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6901228..6901363	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6901464..6901517	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6901681..6901722	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6902027..6902146	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6902461..6902606	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6902713..6902860	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6902942..6903025	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6909025..6909140	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6910254..6910312	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6910770..6910860	exon
Sed0004416.1-exon	Sed0004416.1-exon-LG12:6911873..6912311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6901267..6901363	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6901464..6901517	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6901681..6901722	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6902027..6902146	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6902461..6902606	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6902713..6902860	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6902942..6903025	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6909025..6909140	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6910254..6910312	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6910770..6910860	CDS
Sed0004416.1-cds	Sed0004416.1-cds-LG12:6911873..6912100	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004416.1-three_prime_utr	Sed0004416.1-three_prime_utr-LG12:6912101..6912311	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0004416.1	Sed0004416.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding