Sed0003883.2 (mRNA) Chayote v1

Overview


Name	Sed0003883.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG12: 33041029 .. 33043943 (-)
Sequence length	1692
RNA-Seq Expression	Sed0003883.2
Synteny	Sed0003883.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCAACACTTGTATCCAAACACAAGAAGTGATAAAAACCCTCAAATTTATCTCATGTTCAAAGGCATAAGAATGAAAGTTCCTTGCCCATCTCTCTCTAGAAGTATAAATTTCTCTGTCCTTGCAAAGAAAATCAAAGGGGTGGAAGAAACAGAGAAATTCCAAACAGGCCATTGAATGACAAGGAAGAGTCTTTACCACCCAATTCTCTTTATTGACCAAAATTTATGTAGAGAAAGAAAGAAAGAAAGAATGAATGGGCTGAAAAGAAAAGGAAGCAAAGATGAATGGATGGATAGATGTGTCATGGATTGGTCTTCCAACCAAACCAAACCCACAAATCCCTCTTCCCTGAAATGCCCTTTCTATGTTTCTGCAATATCCCCATCTTCATCACTGTCTCTGAAAACAACCATATTTTTCACCCAGTTATGTGGGCTTTTTTGGGATTTTGTTGGCTCAGTCAGAGCTTCACACACAATAACAGCAATTCAAGAACCCTTTTGTCCTTTCCCTCTTCTTCTTCTTCTTCGCCCACTTTCTCTTTTTTCTTCTTCATTATTACCCTTCTTTTTTCCCTCTTTTCTCTTCTGGGGTTTTGATTTTTCTTCTCTTCTGTGAAGAAAATGAAAGGGGCTGCCTCTCAATACCCTGTTTTTGATGATTCCAAGGCTAGATTCAAGCATCGGAGTCTGCTTCAAGATTATCACGATTTGGAGAAGGTTTGGATTTGTTCGGTTTCTTCCTTGTTTTCATCAGATCTGGCTGTCTTTTGATGGGGTTTGATTGTTTTCTTGATATGATATCATTTTCTGTTGATGGGATTCTTTCTGATTTTGAAGGGGATTTGATCCTAGGGTTTCTAATCTTGAAAAACTTGAGTTGTTTTTGTTTTTCGGGCTGAGCTGTTTTCTTGTGTTAAAAACCCTCTTGGTTTATATTGGATAGAAGTTTTGTGGATTCTTTGTTTATAATTGATACCCATATCCAGGCAAAGGGCCTGTGTAGTTTATCTATGATGTTCTTCCTATCTGAAAATTCATGTTTTAGGTTTGCTATCATTTGTTTATTTTCTTGGTTCTGAGAGATTGTTACCCCTGTAGTGGTCGTTTCTAATCAATCAGCTTTGGCTCATTCTACAGACTCCAGTGGTTTTTCCCTCTTCTTCATAAATACAACATGTTCTTGAGCTGCTTTTCTTATTTGTATGTGGAGCGTTGAAGACTTGGGCTTTGAGGGTATGTTTCACTCAAGGTCTCAGGTTCGAGACCCACCCGTGACATTACTCATTCGATGTCTTTGGTGCCTGGCCTAGAGATGGGCCTGGTTACCTTTGTTTCAAAAAAAAAAAAATCTTATTTGTATGCTTCTGTAGTTTGGTTTTTCGAGATTGTGAGATATAGATCAGTTTCTTTTCCTTGTTTTCTTTTAGATGGGTGAGTGCTTGACTATTCTTAATAGACAAATCGACTCACCCTAACATTTGGTTGTCCATGGAGAGACTCCTAAGAAATCAATTTCTAAATAGGTTGCTCCTTCTCCCTTCTTGTCTAGCCGAATTCAATGATGTTTCATGGCGTACTAGTTCATTGTCCGGATATGTTGCTCATTCATGGGATGATCCCCGGGTGTTCAAACCCACCACTCTTTGGATCATAAGTTGGAAGTTCAACTTCTCGAGAGCACTAGACTTATTTTTTACAATATTATATCATTGTATACAAGGCACACAACCTGAAGTTCTCTTCTCGTTTTGTAACACTTTCATTTTATCAATATATATGTTTGATTGATTTCGTAATCTTTTATTATCCATAGTCGTTAAGAGTTTTTTTTTTTCCCTTTCTTCCAGGAAACAGAAACTGCTAAGAGGAAATTGCAGATGATGAAGCAAAAGAAGATGACACTGATTGCAGAAGTCCGGTATTAATCTATACATCTTTACATTGAATATGTATCGATCTTAGGAGTCAGTGAATTGTTTAGAACTAACATGGGTCTATGTTTATATTGAAGATTCTTGAGGAAAAGATACGAGTACTTAATGAACAACCAGTCATCACTCGACCATCGTCCAAATGCGAATCCAGTACAGAAAAAGCAATTCAACAATCAAGTGGCTAGCAATAATAAGAAGGGGAGGCATGCATCGAGAAGAAGACCCGCGCTGCAACCCCTCCCAACGATCTCTGAAATAAACCAAAAGGAACGAATCGGAAGAGGAATCGAAAGAGGAGCCGGTATTCCTCTGCAGATTGCAACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGGCTACTAGGAAGAAGGCCAATAAGCAGCAGAATTCAACACTAGTTCTTGACTTGAACCAAAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGAGAACCATCACTCCATTTTTCGACCTGAACCAAATATCGGTAATCAACTAGGGAACTTATTCGGCCAACAGTTTTTTCATGATATGGCTAAACTCTGCCATAAGTTTCACTGTATTTTTCACCTCACCTGTTTTAACAATTTATACATTGTGTTTGGTTTAGATGGAGGAAGAGGAATTGCAGACTCATTTCGAGCCAGTGAGAGCTGATGAGCTGAAGAGAAGCCTTATCCGAGGTGGGAATGACGAGCAACAAAACGATATGAAGATTTCAGCTTGCAGGACCGTTGGAGATGGTCCGAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTGAGGGTTTGAGCTCATTTCTATCTCTAGTGTCACTTAGAACTACAGTTAATTGTAGTTCCTTCTTTGGTTTCTGTATTTTTCTATGTTAAAAATGAAAGTAGTATTTGTACATGATAATACATTTTAAAAAGAATGATGATGAGATATCCAAAAGGGAATTGAAGTTGCAAA

mRNA sequence

CTCCCAACACTTGTATCCAAACACAAGAAGTGATAAAAACCCTCAAATTTATCTCATGTTCAAAGGCATAAGAATGAAAGTTCCTTGCCCATCTCTCTCTAGAAGTATAAATTTCTCTGTCCTTGCAAAGAAAATCAAAGGGGTGGAAGAAACAGAGAAATTCCAAACAGGCCATTGAATGACAAGGAAGAGTCTTTACCACCCAATTCTCTTTATTGACCAAAATTTATGTAGAGAAAGAAAGAAAGAAAGAATGAATGGGCTGAAAAGAAAAGGAAGCAAAGATGAATGGATGGATAGATGTGTCATGGATTGGTCTTCCAACCAAACCAAACCCACAAATCCCTCTTCCCTGAAATGCCCTTTCTATGTTTCTGCAATATCCCCATCTTCATCACTGTCTCTGAAAACAACCATATTTTTCACCCAGTTATGTGGGCTTTTTTGGGATTTTGTTGGCTCAGTCAGAGCTTCACACACAATAACAGCAATTCAAGAACCCTTTTGTCCTTTCCCTCTTCTTCTTCTTCTTCGCCCACTTTCTCTTTTTTCTTCTTCATTATTACCCTTCTTTTTTCCCTCTTTTCTCTTCTGGGGTTTTGATTTTTCTTCTCTTCTGTGAAGAAAATGAAAGGGGCTGCCTCTCAATACCCTGTTTTTGATGATTCCAAGGCTAGATTCAAGCATCGGAGTCTGCTTCAAGATTATCACGATTTGGAGAAGGAAACAGAAACTGCTAAGAGGAAATTGCAGATGATGAAGCAAAAGAAGATGACACTGATTGCAGAAGTCCGATTCTTGAGGAAAAGATACGAGTACTTAATGAACAACCAGTCATCACTCGACCATCGTCCAAATGCGAATCCAGTACAGAAAAAGCAATTCAACAATCAAGTGGCTAGCAATAATAAGAAGGGGAGGCATGCATCGAGAAGAAGACCCGCGCTGCAACCCCTCCCAACGATCTCTGAAATAAACCAAAAGGAACGAATCGGAAGAGGAATCGAAAGAGGAGCCGGTATTCCTCTGCAGATTGCAACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGGCTACTAGGAAGAAGGCCAATAAGCAGCAGAATTCAACACTAGTTCTTGACTTGAACCAAAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGAGAACCATCACTCCATTTTTCGACCTGAACCAAATATCGGTAATCAACTAGGGAACTTATTCGGCCAACAGTTTTTTCATGATATGGCTAAACTCTGCCATAAGTTTCACTGTATTTTTCACCTCACCTGTTTTAACAATTTATACATTGTGTTTGGTTTAGATGGAGGAAGAGGAATTGCAGACTCATTTCGAGCCAGTGAGAGCTGATGAGCTGAAGAGAAGCCTTATCCGAGGTGGGAATGACGAGCAACAAAACGATATGAAGATTTCAGCTTGCAGGACCGTTGGAGATGGTCCGAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTGAGGGTTTGAGCTCATTTCTATCTCTAGTGTCACTTAGAACTACAGTTAATTGTAGTTCCTTCTTTGGTTTCTGTATTTTTCTATGTTAAAAATGAAAGTAGTATTTGTACATGATAATACATTTTAAAAAGAATGATGATGAGATATCCAAAAGGGAATTGAAGTTGCAAA

Coding sequence (CDS)

ATGAAAGGGGCTGCCTCTCAATACCCTGTTTTTGATGATTCCAAGGCTAGATTCAAGCATCGGAGTCTGCTTCAAGATTATCACGATTTGGAGAAGGAAACAGAAACTGCTAAGAGGAAATTGCAGATGATGAAGCAAAAGAAGATGACACTGATTGCAGAAGTCCGATTCTTGAGGAAAAGATACGAGTACTTAATGAACAACCAGTCATCACTCGACCATCGTCCAAATGCGAATCCAGTACAGAAAAAGCAATTCAACAATCAAGTGGCTAGCAATAATAAGAAGGGGAGGCATGCATCGAGAAGAAGACCCGCGCTGCAACCCCTCCCAACGATCTCTGAAATAAACCAAAAGGAACGAATCGGAAGAGGAATCGAAAGAGGAGCCGGTATTCCTCTGCAGATTGCAACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGGCTACTAGGAAGAAGGCCAATAAGCAGCAGAATTCAACACTAGTTCTTGACTTGAACCAAAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGAGAACCATCACTCCATTTTTCGACCTGAACCAAATATCGGTAATCAACTAG

Protein sequence

MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQKERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRDASERTITPFFDLNQISVIN

Homology

[Close]

BLAST of Sed0003883.2 vs. NCBI nr
Match: XP_022932147.1 (uncharacterized protein LOC111438466 [Cucurbita moschata])

HSP 1 Score: 282.0 bits (720), Expect = 4.1e-72
Identity = 158/197 (80.20%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFL+
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLK 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPALQPLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASERTITPFFDLNQIS+
Sbjct: 184 ASERTITPFFDLNQISM 193

[Close]

BLAST of Sed0003883.2 vs. NCBI nr
Match: KAG7035686.1 (hypothetical protein SDJN02_02484 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.0 bits (715), Expect = 1.6e-71
Identity = 157/197 (79.70%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFL+
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLK 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPAL PLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASERTITPFFDLNQIS+
Sbjct: 184 ASERTITPFFDLNQISM 193

[Close]

BLAST of Sed0003883.2 vs. NCBI nr
Match: KAG6587817.1 (hypothetical protein SDJN03_16382, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280.0 bits (715), Expect = 1.6e-71
Identity = 157/197 (79.70%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFL+
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLK 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPAL PLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASERTITPFFDLNQIS+
Sbjct: 184 ASERTITPFFDLNQISM 193

[Close]

BLAST of Sed0003883.2 vs. NCBI nr
Match: XP_023531576.1 (uncharacterized protein LOC111793773 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.5 bits (711), Expect = 4.5e-71
Identity = 158/198 (79.80%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 1   MKGAASQYP--VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFL 60
           MKGAASQ+P  VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTLIAEVRFL
Sbjct: 4   MKGAASQHPSSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLIAEVRFL 63

Query: 61  RKRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQ 120
           RKRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPALQPLPTIS+INQ
Sbjct: 64  RKRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDINQ 123

Query: 121 KERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGR 180
           KERI R I+    IP Q +T IPVLDLNQKAK TRKKAN QQNST V DLNQKER+YSGR
Sbjct: 124 KERINRRID----IPPQSSTLIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERIYSGR 183

Query: 181 DASERTITPFFDLNQISV 197
           DASERTITPFFDLNQIS+
Sbjct: 184 DASERTITPFFDLNQISM 194

[Close]

BLAST of Sed0003883.2 vs. NCBI nr
Match: XP_038879755.1 (uncharacterized protein LOC120071506 isoform X2 [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 7.7e-71
Identity = 148/197 (75.13%), Postives = 165/197 (83.76%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           MKG  SQYPVF+DSK RFKH+SLLQDY DLEKET T KRKLQMMK KKMTLIAEVRFLRK
Sbjct: 4   MKGVVSQYPVFEDSKTRFKHQSLLQDYQDLEKETGTVKRKLQMMKLKKMTLIAEVRFLRK 63

Query: 61  RYEYLMNNQ-SSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           RYEYLM NQ S+ DH  N  PVQ+KQ NNQVA+NNKKG++ +RRR  LQPLPTIS++NQK
Sbjct: 64  RYEYLMKNQLSTNDHYSNREPVQQKQLNNQVANNNKKGKNGARRRTVLQPLPTISDVNQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI +GI+    +PLQ +TPIPVLDLNQKAK + +K   QQNST V DLNQKERMYSGRD
Sbjct: 124 ERIDKGID----MPLQNSTPIPVLDLNQKAKTSSRKKANQQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASER ITPFFDLNQIS+
Sbjct: 184 ASERNITPFFDLNQISI 196

[Close]

BLAST of Sed0003883.2 vs. ExPASy TrEMBL
Match: A0A6J1EVU7 (uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC111438466 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.0e-72
Identity = 158/197 (80.20%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFL+
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLK 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPALQPLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASERTITPFFDLNQIS+
Sbjct: 184 ASERTITPFFDLNQISM 193

[Close]

BLAST of Sed0003883.2 vs. ExPASy TrEMBL
Match: A0A6J1HJN9 (uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.1e-70
Identity = 157/197 (79.70%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFLR
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLR 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+K  + QVA+N KKG++ SRRRPALQPLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQK--HKQVANNTKKGKNGSRRRPALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASERTITPFFDLNQIS+
Sbjct: 184 ASERTITPFFDLNQISM 191

[Close]

BLAST of Sed0003883.2 vs. ExPASy TrEMBL
Match: A0A0A0LW13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.3e-67
Identity = 143/197 (72.59%), Postives = 160/197 (81.22%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           MKG  SQYPV++DSK RFKH+SLLQDYHDLEKET T KRKLQMMKQKKMTL+AEVRFLRK
Sbjct: 4   MKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVRFLRK 63

Query: 61  RYEYLMNNQ-SSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           RYEYLM NQ S+ DH  N   VQ+KQ+ NQVA+NNKKG++  RRR AL+PLPTIS+INQK
Sbjct: 64  RYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI         +PLQ +TPIPVLDLNQKAK + +K   Q NST V DLNQKERM SGRD
Sbjct: 124 ERI--------DMPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASER ITPFFDLNQIS+
Sbjct: 184 ASERNITPFFDLNQISI 192

[Close]

BLAST of Sed0003883.2 vs. ExPASy TrEMBL
Match: A0A6J1C111 (uncharacterized protein LOC111007291 OS=Momordica charantia OX=3673 GN=LOC111007291 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.8e-66
Identity = 146/199 (73.37%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           +KG  SQY V++D KARFKH SLLQDY +LEKETET KRKLQMM QKKMTL+AEVRFLRK
Sbjct: 4   IKGVVSQYAVYEDPKARFKHHSLLQDYDELEKETETVKRKLQMMNQKKMTLVAEVRFLRK 63

Query: 61  RYEYLMNNQSSLDHRPNANP--VQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQ 120
           RYEYLM NQSS ++R N +P  VQ+KQ NNQV +NNKKG++ +RRRPALQPLP+IS+INQ
Sbjct: 64  RYEYLMKNQSS-NNRSNGDPVQVQQKQLNNQVTNNNKKGKNGARRRPALQPLPSISDINQ 123

Query: 121 KERIGRGIERGAGIPLQ-IATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSG 180
           KE+I RGI+    IPLQ   TP PV DLNQKAK TRKKAN  QN   VLDLNQKERMYSG
Sbjct: 124 KEKIDRGID----IPLQKNPTPTPVFDLNQKAKTTRKKAN-LQNPAPVLDLNQKERMYSG 183

Query: 181 RDASERTITPFFDLNQISV 197
           RDA ER ITPFFDLNQIS+
Sbjct: 184 RDAGERNITPFFDLNQISI 196

[Close]

BLAST of Sed0003883.2 vs. ExPASy TrEMBL
Match: A0A5A7T0V7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00530 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.4e-65
Identity = 142/197 (72.08%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           MKG  SQYPV++DSK RFKH+SLLQDYHDLEKET T KRKLQMMKQKKMTLIAEVRFLRK
Sbjct: 4   MKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRFLRK 63

Query: 61  RYEYLMNNQ-SSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           RYEYLM NQ S+ DH  N   VQ+KQ  NQVA+NNKK ++  RRR ALQPLPTIS+INQK
Sbjct: 64  RYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI         +P+Q +TPIPVLDLNQKAK + +K   Q NS  V DLNQKERM SGRD
Sbjct: 124 ERI--------DMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRD 183

Query: 181 ASERTITPFFDLNQISV 197
           ASER ITPFFDLNQIS+
Sbjct: 184 ASERNITPFFDLNQISI 192

[Close]

BLAST of Sed0003883.2 vs. TAIR 10
Match: AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-11
Identity = 51/181 (28.18%), Postives = 89/181 (49.17%), Query Frame = 0


Query: 11  FDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQS 70
           F+D K RF+H SL+QDY +L  ETE  +++LQ ++++K TL+AEVRFLR+RY +L  +Q 
Sbjct: 16  FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQP 75

Query: 71  SLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQKERIGRGIERGA 130
               +   +   KK    +V+ +NK                ++ ++N  E+     +   
Sbjct: 76  QEIKKVRRSNGGKK-IRVEVSPSNKSEAETKH--------VSLPDLNHSEKAHDETKTSP 135

Query: 131 GIPLQIATPIPVLDLNQ----KAKATRKKANKQQNSTLVLDLNQKERMYSGRDASERTIT 188
                    +P+ DLNQ    + + T    N Q+N+ +    + K  M S  +  ++ + 
Sbjct: 136 ------KRRVPLFDLNQISGEEEQETEAVDNNQENTRVEESNSCKRLMISSIEMQQKDVK 181

[Close]

BLAST of Sed0003883.2 vs. TAIR 10
Match: AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-06
Identity = 23/42 (54.76%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 29 DLEKETETAKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQS 71
          +LEKE E  +++L+M+KQK++TL +EVRFLR+RYE+L  +Q+
Sbjct: 26 ELEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQT 67

The following BLAST results are available for this feature:

BLAST of Sed0003883.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932147.1	4.1e-72	80.20	uncharacterized protein LOC111438466 [Cucurbita moschata]	[more]
KAG7035686.1	1.6e-71	79.70	hypothetical protein SDJN02_02484 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6587817.1	1.6e-71	79.70	hypothetical protein SDJN03_16382, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531576.1	4.5e-71	79.80	uncharacterized protein LOC111793773 [Cucurbita pepo subsp. pepo]	[more]
XP_038879755.1	7.7e-71	75.13	uncharacterized protein LOC120071506 isoform X2 [Benincasa hispida]	[more]

BLAST of Sed0003883.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0003883.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVU7	2.0e-72	80.20	uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A6J1HJN9	4.1e-70	79.70	uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117...	[more]
A0A0A0LW13	4.3e-67	72.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1	[more]
A0A6J1C111	2.8e-66	73.37	uncharacterized protein LOC111007291 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5A7T0V7	1.4e-65	72.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0003883.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57910.1	3.3e-11	28.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G30630.1	9.3e-06	54.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..104
None	No IPR available	PANTHER	PTHR34807:SF3	OS08G0270800 PROTEIN	coord: 5..196
None	No IPR available	PANTHER	PTHR34807	OS08G0270800 PROTEIN	coord: 5..196

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0003883	Sed0003883	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003883.2-exon	Sed0003883.2-exon-LG12:33041029..33041926	exon
Sed0003883.2-exon	Sed0003883.2-exon-LG12:33042020..33042090	exon
Sed0003883.2-exon	Sed0003883.2-exon-LG12:33043221..33043943	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003883.2-three_prime_utr	Sed0003883.2-three_prime_utr-LG12:33041029..33041496	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003883.2-cds	Sed0003883.2-cds-LG12:33041497..33041926	CDS
Sed0003883.2-cds	Sed0003883.2-cds-LG12:33042020..33042090	CDS
Sed0003883.2-cds	Sed0003883.2-cds-LG12:33043221..33043316	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003883.2-five_prime_utr	Sed0003883.2-five_prime_utr-LG12:33043317..33043943	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0003883.2	Sed0003883.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane