Sed0003883 (gene) Chayote v1

Overview


Name	Sed0003883
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG12: 33041029 .. 33043943 (-)
RNA-Seq Expression	Sed0003883
Synteny	Sed0003883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCAACACTTGTATCCAAACACAAGAAGTGATAAAAACCCTCAAATTTATCTCATGTTCAAAGGCATAAGAATGAAAGTTCCTTGCCCATCTCTCTCTAGAAGTATAAATTTCTCTGTCCTTGCAAAGAAAATCAAAGGGGTGGAAGAAACAGAGAAATTCCAAACAGGCCATTGAATGACAAGGAAGAGTCTTTACCACCCAATTCTCTTTATTGACCAAAATTTATGTAGAGAAAGAAAGAAAGAAAGAATGAATGGGCTGAAAAGAAAAGGAAGCAAAGATGAATGGATGGATAGATGTGTCATGGATTGGTCTTCCAACCAAACCAAACCCACAAATCCCTCTTCCCTGAAATGCCCTTTCTATGTTTCTGCAATATCCCCATCTTCATCACTGTCTCTGAAAACAACCATATTTTTCACCCAGTTATGTGGGCTTTTTTGGGATTTTGTTGGCTCAGTCAGAGCTTCACACACAATAACAGCAATTCAAGAACCCTTTTGTCCTTTCCCTCTTCTTCTTCTTCTTCGCCCACTTTCTCTTTTTTCTTCTTCATTATTACCCTTCTTTTTTCCCTCTTTTCTCTTCTGGGGTTTTGATTTTTCTTCTCTTCTGTGAAGAAAATGAAAGGGGCTGCCTCTCAATACCCTGTTTTTGATGATTCCAAGGCTAGATTCAAGCATCGGAGTCTGCTTCAAGATTATCACGATTTGGAGAAGGTTTGGATTTGTTCGGTTTCTTCCTTGTTTTCATCAGATCTGGCTGTCTTTTGATGGGGTTTGATTGTTTTCTTGATATGATATCATTTTCTGTTGATGGGATTCTTTCTGATTTTGAAGGGGATTTGATCCTAGGGTTTCTAATCTTGAAAAACTTGAGTTGTTTTTGTTTTTCGGGCTGAGCTGTTTTCTTGTGTTAAAAACCCTCTTGGTTTATATTGGATAGAAGTTTTGTGGATTCTTTGTTTATAATTGATACCCATATCCAGGCAAAGGGCCTGTGTAGTTTATCTATGATGTTCTTCCTATCTGAAAATTCATGTTTTAGGTTTGCTATCATTTGTTTATTTTCTTGGTTCTGAGAGATTGTTACCCCTGTAGTGGTCGTTTCTAATCAATCAGCTTTGGCTCATTCTACAGACTCCAGTGGTTTTTCCCTCTTCTTCATAAATACAACATGTTCTTGAGCTGCTTTTCTTATTTGTATGTGGAGCGTTGAAGACTTGGGCTTTGAGGGTATGTTTCACTCAAGGTCTCAGGTTCGAGACCCACCCGTGACATTACTCATTCGATGTCTTTGGTGCCTGGCCTAGAGATGGGCCTGGTTACCTTTGTTTCAAAAAAAAAAAAATCTTATTTGTATGCTTCTGTAGTTTGGTTTTTCGAGATTGTGAGATATAGATCAGTTTCTTTTCCTTGTTTTCTTTTAGATGGGTGAGTGCTTGACTATTCTTAATAGACAAATCGACTCACCCTAACATTTGGTTGTCCATGGAGAGACTCCTAAGAAATCAATTTCTAAATAGGTTGCTCCTTCTCCCTTCTTGTCTAGCCGAATTCAATGATGTTTCATGGCGTACTAGTTCATTGTCCGGATATGTTGCTCATTCATGGGATGATCCCCGGGTGTTCAAACCCACCACTCTTTGGATCATAAGTTGGAAGTTCAACTTCTCGAGAGCACTAGACTTATTTTTTACAATATTATATCATTGTATACAAGGCACACAACCTGAAGTTCTCTTCTCGTTTTGTAACACTTTCATTTTATCAATATATATGTTTGATTGATTTCGTAATCTTTTATTATCCATAGTCGTTAAGAGTTTTTTTTTTTCCCTTTCTTCCAGGAAACAGAAACTGCTAAGAGGAAATTGCAGATGATGAAGCAAAAGAAGATGACACTGATTGCAGAAGTCCGGTATTAATCTATACATCTTTACATTGAATATGTATCGATCTTAGGAGTCAGTGAATTGTTTAGAACTAACATGGGTCTATGTTTATATTGAAGATTCTTGAGGAAAAGATACGAGTACTTAATGAACAACCAGTCATCACTCGACCATCGTCCAAATGCGAATCCAGTACAGAAAAAGCAATTCAACAATCAAGTGGCTAGCAATAATAAGAAGGGGAGGCATGCATCGAGAAGAAGACCCGCGCTGCAACCCCTCCCAACGATCTCTGAAATAAACCAAAAGGAACGAATCGGAAGAGGAATCGAAAGAGGAGCCGGTATTCCTCTGCAGATTGCAACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGGCTACTAGGAAGAAGGCCAATAAGCAGCAGAATTCAACACTAGTTCTTGACTTGAACCAAAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGAGAACCATCACTCCATTTTTCGACCTGAACCAAATATCGGTAATCAACTAGGGAACTTATTCGGCCAACAGTTTTTTCATGATATGGCTAAACTCTGCCATAAGTTTCACTGTATTTTTCACCTCACCTGTTTTAACAATTTATACATTGTGTTTGGTTTAGATGGAGGAAGAGGAATTGCAGACTCATTTCGAGCCAGTGAGAGCTGATGAGCTGAAGAGAAGCCTTATCCGAGGTGGGAATGACGAGCAACAAAACGATATGAAGATTTCAGCTTGCAGGACCGTTGGAGATGGTCCGAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTGAGGGTTTGAGCTCATTTCTATCTCTAGTGTCACTTAGAACTACAGTTAATTGTAGTTCCTTCTTTGGTTTCTGTATTTTTCTATGTTAAAAATGAAAGTAGTATTTGTACATGATAATACATTTTAAAAAGAATGATGATGAGATATCCAAAAGGGAATTGAAGTTGCAAA

mRNA sequence

CTCCCAACACTTGTATCCAAACACAAGAAGTGATAAAAACCCTCAAATTTATCTCATGTTCAAAGGCATAAGAATGAAAGTTCCTTGCCCATCTCTCTCTAGAAGTATAAATTTCTCTGTCCTTGCAAAGAAAATCAAAGGGGTGGAAGAAACAGAGAAATTCCAAACAGGCCATTGAATGACAAGGAAGAGTCTTTACCACCCAATTCTCTTTATTGACCAAAATTTATGTAGAGAAAGAAAGAAAGAAAGAATGAATGGGCTGAAAAGAAAAGGAAGCAAAGATGAATGGATGGATAGATGTGTCATGGATTGGTCTTCCAACCAAACCAAACCCACAAATCCCTCTTCCCTGAAATGCCCTTTCTATGTTTCTGCAATATCCCCATCTTCATCACTGTCTCTGAAAACAACCATATTTTTCACCCAGTTATGTGGGCTTTTTTGGGATTTTGTTGGCTCAGTCAGAGCTTCACACACAATAACAGCAATTCAAGAACCCTTTTGTCCTTTCCCTCTTCTTCTTCTTCTTCGCCCACTTTCTCTTTTTTCTTCTTCATTATTACCCTTCTTTTTTCCCTCTTTTCTCTTCTGGGGTTTTGATTTTTCTTCTCTTCTGTGAAGAAAATGAAAGGGGCTGCCTCTCAATACCCTGTTTTTGATGATTCCAAGGCTAGATTCAAGCATCGGAGTCTGCTTCAAGATTATCACGATTTGGAGAAGGAAACAGAAACTGCTAAGAGGAAATTGCAGATGATGAAGCAAAAGAAGATGACACTGATTGCAGAAGTCCGATTCTTGAGGAAAAGATACGAGTACTTAATGAACAACCAGTCATCACTCGACCATCGTCCAAATGCGAATCCAGTACAGAAAAAGCAATTCAACAATCAAGTGGCTAGCAATAATAAGAAGGGGAGGCATGCATCGAGAAGAAGACCCGCGCTGCAACCCCTCCCAACGATCTCTGAAATAAACCAAAAGGAACGAATCGGAAGAGGAATCGAAAGAGGAGCCGGTATTCCTCTGCAGATTGCAACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGGCTACTAGGAAGAAGGCCAATAAGCAGCAGAATTCAACACTAGTTCTTGACTTGAACCAAAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGAGAACCATCACTCCATTTTTCGACCTGAACCAAATATCGATGGAGGAAGAGGAATTGCAGACTCATTTCGAGCCAGTGAGAGCTGATGAGCTGAAGAGAAGCCTTATCCGAGGTGGGAATGACGAGCAACAAAACGATATGAAGATTTCAGCTTGCAGGACCGTTGGAGATGGTCCGAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTGAGGGTTTGAGCTCATTTCTATCTCTAGTGTCACTTAGAACTACAGTTAATTGTAGTTCCTTCTTTGGTTTCTGTATTTTTCTATGTTAAAAATGAAAGTAGTATTTGTACATGATAATACATTTTAAAAAGAATGATGATGAGATATCCAAAAGGGAATTGAAGTTGCAAA

Coding sequence (CDS)

ATGAAAGGGGCTGCCTCTCAATACCCTGTTTTTGATGATTCCAAGGCTAGATTCAAGCATCGGAGTCTGCTTCAAGATTATCACGATTTGGAGAAGGAAACAGAAACTGCTAAGAGGAAATTGCAGATGATGAAGCAAAAGAAGATGACACTGATTGCAGAAGTCCGATTCTTGAGGAAAAGATACGAGTACTTAATGAACAACCAGTCATCACTCGACCATCGTCCAAATGCGAATCCAGTACAGAAAAAGCAATTCAACAATCAAGTGGCTAGCAATAATAAGAAGGGGAGGCATGCATCGAGAAGAAGACCCGCGCTGCAACCCCTCCCAACGATCTCTGAAATAAACCAAAAGGAACGAATCGGAAGAGGAATCGAAAGAGGAGCCGGTATTCCTCTGCAGATTGCAACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGGCTACTAGGAAGAAGGCCAATAAGCAGCAGAATTCAACACTAGTTCTTGACTTGAACCAAAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGAGAACCATCACTCCATTTTTCGACCTGAACCAAATATCGATGGAGGAAGAGGAATTGCAGACTCATTTCGAGCCAGTGAGAGCTGATGAGCTGAAGAGAAGCCTTATCCGAGGTGGGAATGACGAGCAACAAAACGATATGAAGATTTCAGCTTGCAGGACCGTTGGAGATGGTCCGAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTGAGGGTTTGA

Protein sequence

MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQKERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRDASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGDGPSRAGKRKISWQDQVALRV

Homology

[Close]

BLAST of Sed0003883 vs. NCBI nr
Match: XP_022932147.1 (uncharacterized protein LOC111438466 [Cucurbita moschata])

HSP 1 Score: 397.5 bits (1020), Expect = 8.7e-107
Identity = 215/260 (82.69%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFL+
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLK 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPALQPLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASERTITPFFDLNQISMEEEELQTH++ +RADELK+SL+RGGNDEQQND+KISACRTVGD
Sbjct: 184 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGD 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 256

[Close]

BLAST of Sed0003883 vs. NCBI nr
Match: KAG7035686.1 (hypothetical protein SDJN02_02484 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.6 bits (1015), Expect = 3.3e-106
Identity = 214/260 (82.31%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFL+
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLK 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPAL PLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASERTITPFFDLNQISMEEEELQTH++ +RADELK+SL+RGGNDEQQND+KISACRTVGD
Sbjct: 184 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGD 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 256

[Close]

BLAST of Sed0003883 vs. NCBI nr
Match: XP_023531576.1 (uncharacterized protein LOC111793773 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 6.3e-105
Identity = 214/261 (81.99%), Postives = 233/261 (89.27%), Query Frame = 0


Query: 1   MKGAASQYP--VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFL 60
           MKGAASQ+P  VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTLIAEVRFL
Sbjct: 4   MKGAASQHPSSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLIAEVRFL 63

Query: 61  RKRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQ 120
           RKRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPALQPLPTIS+INQ
Sbjct: 64  RKRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDINQ 123

Query: 121 KERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGR 180
           KERI R I+    IP Q +T IPVLDLNQKAK TRKKAN QQNST V DLNQKER+YSGR
Sbjct: 124 KERINRRID----IPPQSSTLIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERIYSGR 183

Query: 181 DASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVG 240
           DASERTITPFFDLNQISMEEEELQT+++ +RADELK+SL+RGGNDEQQND+KISACRTVG
Sbjct: 184 DASERTITPFFDLNQISMEEEELQTNYDTLRADELKKSLLRGGNDEQQNDIKISACRTVG 243

Query: 241 DGPSRAGKRKISWQDQVALRV 260
           DGPSRAGKRKISWQDQVALRV
Sbjct: 244 DGPSRAGKRKISWQDQVALRV 257

[Close]

BLAST of Sed0003883 vs. NCBI nr
Match: XP_038879755.1 (uncharacterized protein LOC120071506 isoform X2 [Benincasa hispida])

HSP 1 Score: 388.7 bits (997), Expect = 4.1e-104
Identity = 202/260 (77.69%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           MKG  SQYPVF+DSK RFKH+SLLQDY DLEKET T KRKLQMMK KKMTLIAEVRFLRK
Sbjct: 4   MKGVVSQYPVFEDSKTRFKHQSLLQDYQDLEKETGTVKRKLQMMKLKKMTLIAEVRFLRK 63

Query: 61  RYEYLMNNQ-SSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           RYEYLM NQ S+ DH  N  PVQ+KQ NNQVA+NNKKG++ +RRR  LQPLPTIS++NQK
Sbjct: 64  RYEYLMKNQLSTNDHYSNREPVQQKQLNNQVANNNKKGKNGARRRTVLQPLPTISDVNQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI +GI+    +PLQ +TPIPVLDLNQKAK + +K   QQNST V DLNQKERMYSGRD
Sbjct: 124 ERIDKGID----MPLQNSTPIPVLDLNQKAKTSSRKKANQQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASER ITPFFDLNQIS+EEEELQT++EP+R DELK+SL+RGGNDEQQND+KISACR++GD
Sbjct: 184 ASERNITPFFDLNQISIEEEELQTNYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 259

[Close]

BLAST of Sed0003883 vs. NCBI nr
Match: XP_022965187.1 (uncharacterized protein LOC111465117 [Cucurbita maxima])

HSP 1 Score: 387.9 bits (995), Expect = 6.9e-104
Identity = 213/260 (81.92%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFLR
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLR 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+K  + QVA+N KKG++ SRRRPALQPLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQK--HKQVANNTKKGKNGSRRRPALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASERTITPFFDLNQISMEEEELQTH++ +RADELK+SL+RGGNDEQQND+KISACRTVG+
Sbjct: 184 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGE 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 254

[Close]

BLAST of Sed0003883 vs. ExPASy TrEMBL
Match: A0A6J1EVU7 (uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC111438466 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.2e-107
Identity = 215/260 (82.69%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFL+
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLK 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+KQ N QVA+N KKG++ SRRRPALQPLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASERTITPFFDLNQISMEEEELQTH++ +RADELK+SL+RGGNDEQQND+KISACRTVGD
Sbjct: 184 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGD 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 256

[Close]

BLAST of Sed0003883 vs. ExPASy TrEMBL
Match: A0A6J1HJN9 (uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.4e-104
Identity = 213/260 (81.92%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 1   MKGAASQYP-VFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLR 60
           MKGAASQ+P VFDDSK RFKH++LLQDYH+LEKETETAKRKLQMMKQKKMTL+AEVRFLR
Sbjct: 4   MKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLR 63

Query: 61  KRYEYLMNNQSSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           KRYEYLM NQ   DH  N NPVQ+K  + QVA+N KKG++ SRRRPALQPLPTIS+INQK
Sbjct: 64  KRYEYLMKNQLPNDH-SNGNPVQQK--HKQVANNTKKGKNGSRRRPALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI R I+    IP Q +TPIPVLDLNQKAK TRKKAN QQNST V DLNQKERMYSGRD
Sbjct: 124 ERINRRID----IPPQSSTPIPVLDLNQKAK-TRKKAN-QQNSTPVFDLNQKERMYSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASERTITPFFDLNQISMEEEELQTH++ +RADELK+SL+RGGNDEQQND+KISACRTVG+
Sbjct: 184 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGE 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 254

[Close]

BLAST of Sed0003883 vs. ExPASy TrEMBL
Match: A0A0A0LW13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.7e-101
Identity = 198/260 (76.15%), Postives = 222/260 (85.38%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           MKG  SQYPV++DSK RFKH+SLLQDYHDLEKET T KRKLQMMKQKKMTL+AEVRFLRK
Sbjct: 4   MKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVRFLRK 63

Query: 61  RYEYLMNNQ-SSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           RYEYLM NQ S+ DH  N   VQ+KQ+ NQVA+NNKKG++  RRR AL+PLPTIS+INQK
Sbjct: 64  RYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI         +PLQ +TPIPVLDLNQKAK + +K   Q NST V DLNQKERM SGRD
Sbjct: 124 ERI--------DMPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASER ITPFFDLNQIS+EEEELQTH+EP+R DELK+SL+RGGNDEQQND+KISACR++GD
Sbjct: 184 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 255

[Close]

BLAST of Sed0003883 vs. ExPASy TrEMBL
Match: A0A5A7T0V7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00530 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.6e-100
Identity = 197/260 (75.77%), Postives = 219/260 (84.23%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           MKG  SQYPV++DSK RFKH+SLLQDYHDLEKET T KRKLQMMKQKKMTLIAEVRFLRK
Sbjct: 4   MKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRFLRK 63

Query: 61  RYEYLMNNQ-SSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           RYEYLM NQ S+ DH  N   VQ+KQ  NQVA+NNKK ++  RRR ALQPLPTIS+INQK
Sbjct: 64  RYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI         +P+Q +TPIPVLDLNQKAK + +K   Q NS  V DLNQKERM SGRD
Sbjct: 124 ERI--------DMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASER ITPFFDLNQIS+EEEELQTH+EP+R DELK+SL+RGGNDEQQND+KISACR++GD
Sbjct: 184 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 255

[Close]

BLAST of Sed0003883 vs. ExPASy TrEMBL
Match: A0A1S3B8I5 (uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.6e-100
Identity = 197/260 (75.77%), Postives = 219/260 (84.23%), Query Frame = 0


Query: 1   MKGAASQYPVFDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRK 60
           MKG  SQYPV++DSK RFKH+SLLQDYHDLEKET T KRKLQMMKQKKMTLIAEVRFLRK
Sbjct: 4   MKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRFLRK 63

Query: 61  RYEYLMNNQ-SSLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQK 120
           RYEYLM NQ S+ DH  N   VQ+KQ  NQVA+NNKK ++  RRR ALQPLPTIS+INQK
Sbjct: 64  RYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDINQK 123

Query: 121 ERIGRGIERGAGIPLQIATPIPVLDLNQKAKATRKKANKQQNSTLVLDLNQKERMYSGRD 180
           ERI         +P+Q +TPIPVLDLNQKAK + +K   Q NS  V DLNQKERM SGRD
Sbjct: 124 ERI--------DMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRD 183

Query: 181 ASERTITPFFDLNQISMEEEELQTHFEPVRADELKRSLIRGGNDEQQNDMKISACRTVGD 240
           ASER ITPFFDLNQIS+EEEELQTH+EP+R DELK+SL+RGGNDEQQND+KISACR++GD
Sbjct: 184 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 243

Query: 241 GPSRAGKRKISWQDQVALRV 260
           GPSRAGKRKISWQDQVALRV
Sbjct: 244 GPSRAGKRKISWQDQVALRV 255

[Close]

BLAST of Sed0003883 vs. TAIR 10
Match: AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-19
Identity = 81/259 (31.27%), Postives = 116/259 (44.79%), Query Frame = 0


Query: 11  FDDSKARFKHRSLLQDYHDLEKETETAKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQS 70
           F+D K RF+H SL+QDY +L  ETE  +++LQ ++++K TL+AEVRFLR+RY +L  +Q 
Sbjct: 16  FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQP 75

Query: 71  SLDHRPNANPVQKKQFNNQVASNNKKGRHASRRRPALQPLPTISEINQKERIGRGIERGA 130
                                                       EI +  R   G     
Sbjct: 76  -------------------------------------------QEIKKVRRSNGG----- 135

Query: 131 GIPLQIATPIPVLDLNQKAKATRKKANKQQNST---LVLDLNQKERMYSGRDASERTITP 190
                           +K +     +NK +  T    + DLN  E+ +     S +   P
Sbjct: 136 ----------------KKIRVEVSPSNKSEAETKHVSLPDLNHSEKAHDETKTSPKRRVP 195

Query: 191 FFDLNQISMEEEE----LQTHFEPVRADELK--RSLIRGGNDEQQNDMKISACRTVGDGP 250
            FDLNQIS EEE+    +  + E  R +E    + L+    + QQ D+K S+CR  G+G 
Sbjct: 196 LFDLNQISGEEEQETEAVDNNQENTRVEESNSCKRLMISSIEMQQKDVKPSSCRNGGNG- 207

Query: 251 SRAGKRKISWQDQV-ALRV 260
             + KRKISWQD V ALRV
Sbjct: 256 --SNKRKISWQDPVAALRV 207

[Close]

BLAST of Sed0003883 vs. TAIR 10
Match: AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-15
Identity = 74/234 (31.62%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 29  DLEKETETAKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQSSLDHRPNANPVQKK---Q 88
           +LEKE E  +++L+M+KQK++TL +EVRFLR+RYE+L  +Q +L+  P    + +    +
Sbjct: 26  ELEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQ-TLETSPEMLRLSESGGLE 85

Query: 89  FNNQVASNNKKGRHASRRRPALQPLPTISEINQKERIGRGIERGAGIPLQIATPIPVLDL 148
              + +   KK        P        +  N+KE               +A  +   DL
Sbjct: 86  VPRKPSGERKKQSGVRASVPCFDLKLKNTICNEKE--------------ALANNVASCDL 145

Query: 149 NQKAKATRKKANKQQNSTLVLDLNQKERMYSGRDASERTITPFFDLNQISMEEEELQTHF 208
           ++K K +R  ++       + DLN  E   SG D       P FDLNQIS EEEE + + 
Sbjct: 146 DKKRKRSR-GSDVLTFPVSLPDLN-GEGNTSGTDK-----VPGFDLNQISREEEEPEVNG 205

Query: 209 EPVRADELKRSLIRGGNDEQQNDMKISACRTVGDGPSRAGKRKISWQDQVALRV 260
           E + A+ +K +++     +   + K+  C  V    +RA KRK++WQD VAL V
Sbjct: 206 EHMVAEAMKNAMLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVALSV 237

The following BLAST results are available for this feature:

BLAST of Sed0003883 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932147.1	8.7e-107	82.69	uncharacterized protein LOC111438466 [Cucurbita moschata]	[more]
KAG7035686.1	3.3e-106	82.31	hypothetical protein SDJN02_02484 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023531576.1	6.3e-105	81.99	uncharacterized protein LOC111793773 [Cucurbita pepo subsp. pepo]	[more]
XP_038879755.1	4.1e-104	77.69	uncharacterized protein LOC120071506 isoform X2 [Benincasa hispida]	[more]
XP_022965187.1	6.9e-104	81.92	uncharacterized protein LOC111465117 [Cucurbita maxima]	[more]

BLAST of Sed0003883 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0003883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVU7	4.2e-107	82.69	uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A6J1HJN9	3.4e-104	81.92	uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117...	[more]
A0A0A0LW13	2.7e-101	76.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1	[more]
A0A5A7T0V7	8.6e-100	75.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B8I5	8.6e-100	75.77	uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=...	[more]

BLAST of Sed0003883 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57910.1	2.5e-19	31.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G30630.1	2.9e-15	31.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..63
None	No IPR available	PANTHER	PTHR34807:SF3	OS08G0270800 PROTEIN	coord: 1..217
None	No IPR available	PANTHER	PTHR34807	OS08G0270800 PROTEIN	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003883.1	Sed0003883.1	mRNA
Sed0003883.2	Sed0003883.2	mRNA
Sed0003883.3	Sed0003883.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane