Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGCTTTGTACCTTCGAACAAGTTGAATTTGCAGACGAAATTAGAATCGCCATTGAAGCATCGAACTTATAAACCACTCTTAAACCCTTATTTCCTAACCAAAGATTCAAAAAACCCACTTAGATTTTGATTCTGCAGAAACGAAGTGAAGAACTTACTCTAAAATGGCTTCATCTTCTCCATTTTTCGGCCTCTCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTCATTTGGCAGTCAATTCCTTCAACCCTCGTCTTCATCCTCTTCAAATTCTTCGTTTCCGCCATTTCTTCAGTTTCTGATGCCAATTCCTCAAGTGGGTTCCGAAACCCATCAGCCCCTTTTGCTTATTTGCTCACTGGGTTTCTCACTTTTCTCACATTTCATCTCTCTCAGCTCATCTTCTCTGCTTCCCTCTCTCTCCTTGCTTCGCCCCAGCTCCACCGCCCCGCCGCGCCGATCGAGCTCGTTTTCGAGCTCGTTCGGTTTCTTGTTGGCGGTGGCAATGCCTCATCGGCTTCGGATTCCAAGGATTTTCGCCGCCGGGCTACTTTTTCGTTGTGCTTGCTTGTTTCTGTTGTGGCAATGGCGGTTTCGGGTTCATTGGCGGCGGTTTCTGTATGTTGGGGGAAATCGGATGGTGTTAGAAGTGCCTGGATTACTGGTCTATTGATGGGTTTGATTTATGGATCTTTCTATGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGGTTGCTTTTTTGGTTTTTAGTTTGTAATCATTTTCATCTTCAGTATTTGTATGGTTAATTTTCTGTTTGATTGCTAGAATAGTGGATTTTGATATGATTGAATGAGTAGTTATGATTTACTTGGCTGGTTTTGAATGTAGAGAAATAATTGTTTGAACCACTCAAAATGAGGTTGTTGTGGGGTTTTTTTTTGTGTTGGTAACAGGGTTTTTGATATCCTCATATCTTAAATATTAGGGTTTTGGTGAGAAGGAATTGTATTGAATAAATAAGTATATGGTTTGTTTTCAATTTTTCTGATGGGCCTTAGTTTCATGAGACTCATTGTTGTGATCGTGACAATGCTACATACATTTTGATTGTTAAGCTGAGTGTTTGTTATTTATATATGTATAGTTTCTTGGGAATTTGGAGTACTTGGAGAGGTAACTACCAGCTCAGTTAATTTGTTTGGACTTTGGAATAATGTAATTCTTGCTTTATTAGTTTGGTATTTCTTGATTTAAACTTTCAAGATGTCATATTATTTTGACACTTGTATGATGCTCTGTGCACAACGAAAAGATCTTGAATTTTAGTAGTTATGATGCAACTTTGTGAACTGTGGAGATTTTTAGTGCAGTACAACTTACTTCTTCTTTGGATATTGTTTATGGTTAATTTTGGAAGGATATTTTTTGGTTTATCCACAAGAAAACTAGGATATCTGTAAATGTGTATCTCTTATAGATCATTTTATCATTTATGGTGTGTATCCTCTTTGATGACATTGATGTATACTCTCTCTTATTGATCTATAAAATATTTTCTGCACTTTTAGGCCGTTTCTACATTTTGTACACCCATCAATTAGTGATGTTTTTATATTTATGTTCTTGTATGGATGTTGAACCATTAAGTTTCCTGTTTACTGACTTCAAATGCTTTTATCGACAGCGACCTCCTTTTTTCAGCTTCAAGATGGGTTTTCCGGCAGCTACCGCGTTGGCTTCCAAACTTTCTTCTGCGGCTTTCCTATTTTCAGCAGTATTAATGGTGCTTTTGCCGGATCAATTTAAGAGAAATGTTACAGTCATGAAGTTCATAGCCAACCAGGCCATTATTTTCATTGGAAGCTTTGCAGTATTTCTTTCTTGGGAGTTGACACATCACTTGCATCGGGTTAGTCTATTGTGCTGTGCTTATATTTTTTTTGAGATTACAACAATTGAGGGTGGGGGGACTCGAACCCAAGACCTCTGGTCATTGGGCAGACACTAGTGTCGTTGCTTAAATAAAATCTCATTCTCTTGCTTAATTAAAATCTCATTCTCTTGCTTAATTAAAATCTGTTGCTTCAATCATTTATTCTAACCAGCCAACAAGAGATGGCTCTAGAATACTAGTATGTTGTATGACCTAGTAACTAAGAGGCTACAGGTTCGAATCCCCCCATCTTAGGTCGTGATTTGACAATGGTGAGCTAACTCCACAAACCCGTCTGAATGTTGTTGAATTCAAAAATCATTTTTCCTAACCAAGCATGCTCTTAATTAAGTTAGTCGATTGGTTTTATCTTTCTTAGAATTACGTAGGTGTTGCAACAATCCTTACCAATAGATCACCATTTTAATGTCCTTTGGCTATTTTAGTTTTCTAAAAAGGATGTTTCAACAGACATTACTGCTCTCCATGATCTAATCTCTTTTGTTCTGCCGTTTAGTATGGTTATTTACCAGTTTGTAACAGAACATTTATCATTCGAAGACGGGTTCTGCACTTTTTATTGTGCCTATGGATGTTTGATAGGTAATTTCTGATTATTTACTGTTGTGATATTTCTTTTGTATTTTAGATCTTACATACCAAGAGGTTCACTTTTGCACCTCCAAAGGGATCTGCAGCTGCAGAAACAAATCCTAGTGAGTACCTCTTTGCAGCTTTGGAGGACAGCAACTCAGGGTCTCTTTTGCAATATCTTGCATTCCTTGATCTCTGCATGGTTTGTGAGAATAATGTCGATATATGGAGGAGAGCTGCATTTTTCGAAGAAACGGGTGAGACGTATAAGCGAGTTATATCCATATCCTTGAAGCCTCTGGAGCAATTTGCCCTGAACTTATGTGAAGGTTTGGAAGGTTCTGTGGACACAACCTCCCTACTATCCAAACAGTTATTACCACCAGAGGACTCTCGTTTCGACTTAAAACAGTTGGAAACTCTTAAAAACTTTCAGGTAGTAGATAGCTTTTTATTGGGATGAACTGTAACCATTCTCTTGATTGCTTGTTGTAGCTTGTTAAGTTCTGTTTTCAGGTAGGAGATAACTTTAATTTGGGGGACAGTGTCCTATTTTGAATGTTTAGGGTAGCTTTGGATTAAACTACAAATTTAGAATTTTGTTAATTAGTTGTATCTCTAGGTTGATAAAAGATTTTAATGAAGTTTTAACACCAAAAGGATGGTCATTAATAGTTGAGGTCAACTGGGCATGGTGTATGCTTATGACCTAATGACCAAGAGGTTACGGGCTTGAATTCCTCTGCTCAAATATTGTTAACTTAAAAAAATAAACAAACTAAAGGATTACATCATAACTTTTTAGATCATAGGGTCAAAATTCTAACTTTCTCCAAACTATTAGATATTAAGACCAAATCTGCAATTTATAACCTTTTACTTATCAATCTTAGATTCCTTGTGTGTAGCTTTTACAGTTATGCTGCTTAACTTTGAAAATGAAATCAGCTTACTGTGAACATTTGTGTGGCTATTGATTCCAACTGATCATGCTCGCTAAATTGTGCAGTTGTATGCATGGTGTGCTCGAACGGTTTCTATGTTGACTGCACGCTCACATGCCGAAGATCAATTTGGGGTTGCCCAACTCTCTGGTAGTAATGCTTCTGTTATGTCAACGCTGTTGTCTTGCCTACTTGCTATTGAAGTGTTGATGGGGAAAAAGACTAATATACAATCTTCACACGATTTATTCGGTCCGGCTAGTATTAAATGGGCAACATCAAGTATCGGAAGACTCGATGCTTCAATCAGCAAAAAGAAAAGCGGTCCGCTACAATCAAACGCGTATGCTATTGCAGACATATTGAGGGCATCGATCTATCTCATTGTTTCTGCATTCCATGATGAGATGCTCAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACTAGTGAAAAGCCCCCTTTTGGTACTCGTGAGTTCCTTCTACAGAAATTGCATATTTTCTTGGATTTTCAAGCTTAGATATGATGGTGATTTCGTTTTCTCGACTCCGTCCCGTTTAGCAAATTATACCGAATCACTAGTGAGGCAGCTTTGTTGTCTTTGTTTCTAAAGAGTTACAGTTGGAATGTGAAGAGCTTGTTGCTTGTTAGACTGATGGAAAGTTCACAAACTAAGTTGGAATAACTTGGTAAGTTTGTAATACATTTGGCCTTTTATGAACACCAATATTTTAGTTGAGTCTGTCTTGTTGATAACACTTGGAATTTCTTAATCTTTTGTAGCTCTCATTTTCCACCA
mRNA sequence
AAGAAGCTTTGTACCTTCGAACAAGTTGAATTTGCAGACGAAATTAGAATCGCCATTGAAGCATCGAACTTATAAACCACTCTTAAACCCTTATTTCCTAACCAAAGATTCAAAAAACCCACTTAGATTTTGATTCTGCAGAAACGAAGTGAAGAACTTACTCTAAAATGGCTTCATCTTCTCCATTTTTCGGCCTCTCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTCATTTGGCAGTCAATTCCTTCAACCCTCGTCTTCATCCTCTTCAAATTCTTCGTTTCCGCCATTTCTTCAGTTTCTGATGCCAATTCCTCAAGTGGGTTCCGAAACCCATCAGCCCCTTTTGCTTATTTGCTCACTGGGTTTCTCACTTTTCTCACATTTCATCTCTCTCAGCTCATCTTCTCTGCTTCCCTCTCTCTCCTTGCTTCGCCCCAGCTCCACCGCCCCGCCGCGCCGATCGAGCTCGTTTTCGAGCTCGTTCGGTTTCTTGTTGGCGGTGGCAATGCCTCATCGGCTTCGGATTCCAAGGATTTTCGCCGCCGGGCTACTTTTTCGTTGTGCTTGCTTGTTTCTGTTGTGGCAATGGCGGTTTCGGGTTCATTGGCGGCGGTTTCTGTATGTTGGGGGAAATCGGATGGTGTTAGAAGTGCCTGGATTACTGGTCTATTGATGGGTTTGATTTATGGATCTTTCTATGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGACCTCCTTTTTTCAGCTTCAAGATGGGTTTTCCGGCAGCTACCGCGTTGGCTTCCAAACTTTCTTCTGCGGCTTTCCTATTTTCAGCAGTATTAATGGTGCTTTTGCCGGATCAATTTAAGAGAAATGTTACAGTCATGAAGTTCATAGCCAACCAGGCCATTATTTTCATTGGAAGCTTTGCAGTATTTCTTTCTTGGGAGTTGACACATCACTTGCATCGGATCTTACATACCAAGAGGTTCACTTTTGCACCTCCAAAGGGATCTGCAGCTGCAGAAACAAATCCTAGTGAGTACCTCTTTGCAGCTTTGGAGGACAGCAACTCAGGGTCTCTTTTGCAATATCTTGCATTCCTTGATCTCTGCATGGTTTGTGAGAATAATGTCGATATATGGAGGAGAGCTGCATTTTTCGAAGAAACGGGTGAGACGTATAAGCGAGTTATATCCATATCCTTGAAGCCTCTGGAGCAATTTGCCCTGAACTTATGTGAAGGTTTGGAAGGTTCTGTGGACACAACCTCCCTACTATCCAAACAGTTATTACCACCAGAGGACTCTCGTTTCGACTTAAAACAGTTGGAAACTCTTAAAAACTTTCAGTTGTATGCATGGTGTGCTCGAACGGTTTCTATGTTGACTGCACGCTCACATGCCGAAGATCAATTTGGGGTTGCCCAACTCTCTGGTAGTAATGCTTCTGTTATGTCAACGCTGTTGTCTTGCCTACTTGCTATTGAAGTGTTGATGGGGAAAAAGACTAATATACAATCTTCACACGATTTATTCGGTCCGGCTAGTATTAAATGGGCAACATCAAGTATCGGAAGACTCGATGCTTCAATCAGCAAAAAGAAAAGCGGTCCGCTACAATCAAACGCGTATGCTATTGCAGACATATTGAGGGCATCGATCTATCTCATTGTTTCTGCATTCCATGATGAGATGCTCAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACTAGTGAAAAGCCCCCTTTTGGTACTCGTGAGTTCCTTCTACAGAAATTGCATATTTTCTTGGATTTTCAAGCTTAGATATGATGGTGATTTCGTTTTCTCGACTCCGTCCCGTTTAGCAAATTATACCGAATCACTAGTGAGGCAGCTTTGTTGTCTTTGTTTCTAAAGAGTTACAGTTGGAATGTGAAGAGCTTGTTGCTTGTTAGACTGATGGAAAGTTCACAAACTAAGTTGGAATAACTTGGTAAGTTTGTAATACATTTGGCCTTTTATGAACACCAATATTTTAGTTGAGTCTGTCTTGTTGATAACACTTGGAATTTCTTAATCTTTTGTAGCTCTCATTTTCCACCA
Coding sequence (CDS)
ATGGCTTCATCTTCTCCATTTTTCGGCCTCTCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTCATTTGGCAGTCAATTCCTTCAACCCTCGTCTTCATCCTCTTCAAATTCTTCGTTTCCGCCATTTCTTCAGTTTCTGATGCCAATTCCTCAAGTGGGTTCCGAAACCCATCAGCCCCTTTTGCTTATTTGCTCACTGGGTTTCTCACTTTTCTCACATTTCATCTCTCTCAGCTCATCTTCTCTGCTTCCCTCTCTCTCCTTGCTTCGCCCCAGCTCCACCGCCCCGCCGCGCCGATCGAGCTCGTTTTCGAGCTCGTTCGGTTTCTTGTTGGCGGTGGCAATGCCTCATCGGCTTCGGATTCCAAGGATTTTCGCCGCCGGGCTACTTTTTCGTTGTGCTTGCTTGTTTCTGTTGTGGCAATGGCGGTTTCGGGTTCATTGGCGGCGGTTTCTGTATGTTGGGGGAAATCGGATGGTGTTAGAAGTGCCTGGATTACTGGTCTATTGATGGGTTTGATTTATGGATCTTTCTATGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGACCTCCTTTTTTCAGCTTCAAGATGGGTTTTCCGGCAGCTACCGCGTTGGCTTCCAAACTTTCTTCTGCGGCTTTCCTATTTTCAGCAGTATTAATGGTGCTTTTGCCGGATCAATTTAAGAGAAATGTTACAGTCATGAAGTTCATAGCCAACCAGGCCATTATTTTCATTGGAAGCTTTGCAGTATTTCTTTCTTGGGAGTTGACACATCACTTGCATCGGATCTTACATACCAAGAGGTTCACTTTTGCACCTCCAAAGGGATCTGCAGCTGCAGAAACAAATCCTAGTGAGTACCTCTTTGCAGCTTTGGAGGACAGCAACTCAGGGTCTCTTTTGCAATATCTTGCATTCCTTGATCTCTGCATGGTTTGTGAGAATAATGTCGATATATGGAGGAGAGCTGCATTTTTCGAAGAAACGGGTGAGACGTATAAGCGAGTTATATCCATATCCTTGAAGCCTCTGGAGCAATTTGCCCTGAACTTATGTGAAGGTTTGGAAGGTTCTGTGGACACAACCTCCCTACTATCCAAACAGTTATTACCACCAGAGGACTCTCGTTTCGACTTAAAACAGTTGGAAACTCTTAAAAACTTTCAGTTGTATGCATGGTGTGCTCGAACGGTTTCTATGTTGACTGCACGCTCACATGCCGAAGATCAATTTGGGGTTGCCCAACTCTCTGGTAGTAATGCTTCTGTTATGTCAACGCTGTTGTCTTGCCTACTTGCTATTGAAGTGTTGATGGGGAAAAAGACTAATATACAATCTTCACACGATTTATTCGGTCCGGCTAGTATTAAATGGGCAACATCAAGTATCGGAAGACTCGATGCTTCAATCAGCAAAAAGAAAAGCGGTCCGCTACAATCAAACGCGTATGCTATTGCAGACATATTGAGGGCATCGATCTATCTCATTGTTTCTGCATTCCATGATGAGATGCTCAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACTAGTGAAAAGCCCCCTTTTGGTACTCGTGAGTTCCTTCTACAGAAATTGCATATTTTCTTGGATTTTCAAGCTTAG
Protein sequence
MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLVGGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
Homology
BLAST of Sed0002755.1 vs. NCBI nr
Match:
XP_022146635.1 (uncharacterized protein LOC111015789 [Momordica charantia])
HSP 1 Score: 919.1 bits (2374), Expect = 1.8e-263
Identity = 477/553 (86.26%), Postives = 506/553 (91.50%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M SSS FF +MVVKNRFLGFLIWQSIPST VF LFK FVSAISSVS +NSSSG RNPS
Sbjct: 1 MPSSSQFFVPPDMVVKNRFLGFLIWQSIPSTFVFFLFKIFVSAISSVSGSNSSSGSRNPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
PFA LL GFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+EL F LVRFLV GGG A
Sbjct: 61 GPFASLLAGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELAFGLVRFLVLAGGGTA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS SKDFRRRAT SL L++ V+A AVSGSLAAVS+CWGKSDG+RSAW+TGL MGLIYG
Sbjct: 121 SSASASKDFRRRATVSLYLVLFVLATAVSGSLAAVSICWGKSDGLRSAWLTGLSMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
SFYVYKK WVL FPIIQRPPFFSFKMG P+AT LASKLS+AAF+FSAVLMVLLPDQFKRN
Sbjct: 181 SFYVYKKSWVLTFPIIQRPPFFSFKMGLPSATTLASKLSAAAFIFSAVLMVLLPDQFKRN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KF+ANQAI+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSEYLFA
Sbjct: 241 VTVRKFVANQAIVFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEE+GETYKRVISISLKPLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEESGETYKRVISISLKPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L EGL+GS D TS LSKQLLPP+DS FD+KQLETLKNFQLYAWCARTVS LTARSH+ED+
Sbjct: 361 LGEGLDGSADITSQLSKQLLPPKDSHFDVKQLETLKNFQLYAWCARTVSTLTARSHSEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNASVMSTLLSCLLA+EVLMGKKTNIQS HDL GPASIKWATSSI R+DAS+
Sbjct: 421 FGVAQLSGSNASVMSTLLSCLLAVEVLMGKKTNIQSPHDLLGPASIKWATSSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKKSGPL S YAIAD+LRASIYLIVSAFH+EML+SAKSGVLEKDWIT EKP FGTRE
Sbjct: 481 GKKKSGPLHSKVYAIADVLRASIYLIVSAFHNEMLSSAKSGVLEKDWITGEKPAFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. NCBI nr
Match:
KAA0052512.1 (Ndc1_Nup domain-containing protein [Cucumis melo var. makuwa] >TYK13313.1 Ndc1_Nup domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 916.0 bits (2366), Expect = 1.6e-262
Identity = 474/553 (85.71%), Postives = 505/553 (91.32%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M+SSSPFFG EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS +SS+G RNPS
Sbjct: 1 MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTFVFFLFKIFVSAISSVSFTSSSAGTRNPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
APFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+ELVF LVRFLV GG NA
Sbjct: 61 APFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS KDFRRRA S L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYG
Sbjct: 121 SSASALKDFRRRAMVSFYLILFVVATAVSGSLAAVSICWGKSDGLRSAWHTGLLMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
SFYVYKKRWVLMFPIIQRPPFFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+N
Sbjct: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Sbjct: 241 VTVRKFIANQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L +GLEG+VD TS LS+QLLPP D FD+KQLE LKNFQLYAWCARTVS LTARSH ED+
Sbjct: 361 LGQGLEGAVDMTSQLSRQLLPPNDPHFDVKQLEALKNFQLYAWCARTVSTLTARSHVEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+
Sbjct: 421 FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNIQSSHDLFGPAGIKWATTSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKKSGPL S AYAIAD+LR SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE
Sbjct: 481 GKKKSGPLHSKAYAIADVLRVSIYLIVTAFHNEMLNSAKSGVLEKDWITDEKPPFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. NCBI nr
Match:
XP_008439582.1 (PREDICTED: uncharacterized protein LOC103484335 [Cucumis melo])
HSP 1 Score: 915.2 bits (2364), Expect = 2.7e-262
Identity = 474/553 (85.71%), Postives = 505/553 (91.32%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M+SSSPFFG EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS +SS+G RNPS
Sbjct: 1 MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTFVFFLFKIFVSAISSVSFTSSSAGTRNPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
APFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+ELVF LVRFLV GG NA
Sbjct: 61 APFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS KDFRRRA S L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYG
Sbjct: 121 SSASALKDFRRRAMASFYLILFVVATAVSGSLAAVSICWGKSDGLRSAWHTGLLMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
SFYVYKKRWVLMFPIIQRPPFFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+N
Sbjct: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Sbjct: 241 VTVRKFIANQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L +GLEG+VD TS LS+QLLPP DS FD+KQLE LKNFQLYAWCARTVS LTARSH ED+
Sbjct: 361 LGQGLEGAVDMTSQLSRQLLPPNDSHFDVKQLEALKNFQLYAWCARTVSTLTARSHVEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+
Sbjct: 421 FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNIQSSHDLFGPAGIKWATTSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKKSGPL AYAIAD+LR SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE
Sbjct: 481 GKKKSGPLHLKAYAIADVLRVSIYLIVTAFHNEMLNSAKSGVLEKDWITDEKPPFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. NCBI nr
Match:
XP_038882942.1 (uncharacterized protein LOC120074035 [Benincasa hispida])
HSP 1 Score: 911.4 bits (2354), Expect = 3.8e-261
Identity = 475/555 (85.59%), Postives = 502/555 (90.45%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M+SSSPFFG EMVVKNRFLGFLIWQSIPST+VF LFK FVSA+SSVS NSSSG NPS
Sbjct: 3 MSSSSPFFGPPEMVVKNRFLGFLIWQSIPSTIVFFLFKIFVSAVSSVSFTNSSSGTTNPS 62
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
PFA LLTGFLTFLTFHLSQL+FSASLSLLASPQL RPAAP+EL F LVRFLV GG N
Sbjct: 63 PPFASLLTGFLTFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFGLVRFLVVSGGDNV 122
Query: 121 S--SASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLI 180
S SAS S DFRRRA S L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLI
Sbjct: 123 SSASASASADFRRRAMVSFSLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHTGLLMGLI 182
Query: 181 YGSFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFK 240
YG FYVYKKRWVL FPIIQRPPFFSFKMGFP+AT LASKLS+A FLFSAVL++LLPDQ K
Sbjct: 183 YGVFYVYKKRWVLTFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLIILLPDQLK 242
Query: 241 RNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYL 300
RNVTV KFIANQAI+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSEYL
Sbjct: 243 RNVTVRKFIANQAILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYL 302
Query: 301 FAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFA 360
FAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETGETYKRVISISL+PLEQFA
Sbjct: 303 FAALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGETYKRVISISLRPLEQFA 362
Query: 361 LNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAE 420
LNL EGLEG+VD TS LSKQLLPP+DS D+KQLETLKNFQLYAWCARTVS LTARSH E
Sbjct: 363 LNLGEGLEGAVDITSQLSKQLLPPKDSHLDIKQLETLKNFQLYAWCARTVSTLTARSHVE 422
Query: 421 DQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDA 480
D+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKK NIQSSH+LFGPA IKWATSSI R+D
Sbjct: 423 DRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKINIQSSHELFGPAGIKWATSSIRRVDT 482
Query: 481 SISKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTR 540
S+ KKKSGPL S AYA AD+LRASIYLIVSAFH+EMLNSAKSGVLEKDWIT EKPPFGTR
Sbjct: 483 SVGKKKSGPLHSKAYATADVLRASIYLIVSAFHNEMLNSAKSGVLEKDWITDEKPPFGTR 542
Query: 541 EFLLQKLHIFLDFQA 552
E LLQKLHIFLDFQA
Sbjct: 543 ELLLQKLHIFLDFQA 557
BLAST of Sed0002755.1 vs. NCBI nr
Match:
XP_004134593.1 (uncharacterized protein LOC101219057 [Cucumis sativus] >KGN49437.1 hypothetical protein Csa_003622 [Cucumis sativus])
HSP 1 Score: 905.6 bits (2339), Expect = 2.1e-259
Identity = 467/553 (84.45%), Postives = 504/553 (91.14%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M+SSSPFFG EMVVKNRFLGFLIWQ IPST+VF LFK FVSAISSVS NSS+G R+PS
Sbjct: 1 MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
APFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+ELVF LVRFLV GG NA
Sbjct: 61 APFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS KDFRRRA S L++ VVA AVSGSLAAVS+CWGKSDG+RSAW GLLMGLIYG
Sbjct: 121 SSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
FYVYKKRWVLMFPIIQRPPFFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+N
Sbjct: 181 CFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KFI NQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Sbjct: 241 VTVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L +GLEG++D TS LS+QLLPP DS FD+KQL+ LKNFQLYAWCARTVS LTARSH ED+
Sbjct: 361 LGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQLYAWCARTVSTLTARSHVEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTN+QSSH+LFGPA IKWATSSI R+DAS+
Sbjct: 421 FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKK+GPL S AYAIAD+LR SIYLIV+AFH+EM+NSAKSGVLEKDWIT EKPPFGTRE
Sbjct: 481 GKKKNGPLHSKAYAIADVLRVSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. ExPASy TrEMBL
Match:
A0A6J1CXT0 (uncharacterized protein LOC111015789 OS=Momordica charantia OX=3673 GN=LOC111015789 PE=3 SV=1)
HSP 1 Score: 919.1 bits (2374), Expect = 8.9e-264
Identity = 477/553 (86.26%), Postives = 506/553 (91.50%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M SSS FF +MVVKNRFLGFLIWQSIPST VF LFK FVSAISSVS +NSSSG RNPS
Sbjct: 1 MPSSSQFFVPPDMVVKNRFLGFLIWQSIPSTFVFFLFKIFVSAISSVSGSNSSSGSRNPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
PFA LL GFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+EL F LVRFLV GGG A
Sbjct: 61 GPFASLLAGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELAFGLVRFLVLAGGGTA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS SKDFRRRAT SL L++ V+A AVSGSLAAVS+CWGKSDG+RSAW+TGL MGLIYG
Sbjct: 121 SSASASKDFRRRATVSLYLVLFVLATAVSGSLAAVSICWGKSDGLRSAWLTGLSMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
SFYVYKK WVL FPIIQRPPFFSFKMG P+AT LASKLS+AAF+FSAVLMVLLPDQFKRN
Sbjct: 181 SFYVYKKSWVLTFPIIQRPPFFSFKMGLPSATTLASKLSAAAFIFSAVLMVLLPDQFKRN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KF+ANQAI+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSEYLFA
Sbjct: 241 VTVRKFVANQAIVFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEYLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEE+GETYKRVISISLKPLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEESGETYKRVISISLKPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L EGL+GS D TS LSKQLLPP+DS FD+KQLETLKNFQLYAWCARTVS LTARSH+ED+
Sbjct: 361 LGEGLDGSADITSQLSKQLLPPKDSHFDVKQLETLKNFQLYAWCARTVSTLTARSHSEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNASVMSTLLSCLLA+EVLMGKKTNIQS HDL GPASIKWATSSI R+DAS+
Sbjct: 421 FGVAQLSGSNASVMSTLLSCLLAVEVLMGKKTNIQSPHDLLGPASIKWATSSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKKSGPL S YAIAD+LRASIYLIVSAFH+EML+SAKSGVLEKDWIT EKP FGTRE
Sbjct: 481 GKKKSGPLHSKVYAIADVLRASIYLIVSAFHNEMLSSAKSGVLEKDWITGEKPAFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. ExPASy TrEMBL
Match:
A0A5D3CN15 (Ndc1_Nup domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009360 PE=3 SV=1)
HSP 1 Score: 916.0 bits (2366), Expect = 7.5e-263
Identity = 474/553 (85.71%), Postives = 505/553 (91.32%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M+SSSPFFG EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS +SS+G RNPS
Sbjct: 1 MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTFVFFLFKIFVSAISSVSFTSSSAGTRNPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
APFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+ELVF LVRFLV GG NA
Sbjct: 61 APFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS KDFRRRA S L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYG
Sbjct: 121 SSASALKDFRRRAMVSFYLILFVVATAVSGSLAAVSICWGKSDGLRSAWHTGLLMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
SFYVYKKRWVLMFPIIQRPPFFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+N
Sbjct: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Sbjct: 241 VTVRKFIANQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L +GLEG+VD TS LS+QLLPP D FD+KQLE LKNFQLYAWCARTVS LTARSH ED+
Sbjct: 361 LGQGLEGAVDMTSQLSRQLLPPNDPHFDVKQLEALKNFQLYAWCARTVSTLTARSHVEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+
Sbjct: 421 FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNIQSSHDLFGPAGIKWATTSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKKSGPL S AYAIAD+LR SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE
Sbjct: 481 GKKKSGPLHSKAYAIADVLRVSIYLIVTAFHNEMLNSAKSGVLEKDWITDEKPPFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. ExPASy TrEMBL
Match:
A0A1S3AZ36 (uncharacterized protein LOC103484335 OS=Cucumis melo OX=3656 GN=LOC103484335 PE=3 SV=1)
HSP 1 Score: 915.2 bits (2364), Expect = 1.3e-262
Identity = 474/553 (85.71%), Postives = 505/553 (91.32%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M+SSSPFFG EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS +SS+G RNPS
Sbjct: 1 MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTFVFFLFKIFVSAISSVSFTSSSAGTRNPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
APFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+ELVF LVRFLV GG NA
Sbjct: 61 APFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS KDFRRRA S L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYG
Sbjct: 121 SSASALKDFRRRAMASFYLILFVVATAVSGSLAAVSICWGKSDGLRSAWHTGLLMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
SFYVYKKRWVLMFPIIQRPPFFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+N
Sbjct: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Sbjct: 241 VTVRKFIANQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L +GLEG+VD TS LS+QLLPP DS FD+KQLE LKNFQLYAWCARTVS LTARSH ED+
Sbjct: 361 LGQGLEGAVDMTSQLSRQLLPPNDSHFDVKQLEALKNFQLYAWCARTVSTLTARSHVEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+
Sbjct: 421 FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNIQSSHDLFGPAGIKWATTSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKKSGPL AYAIAD+LR SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE
Sbjct: 481 GKKKSGPLHLKAYAIADVLRVSIYLIVTAFHNEMLNSAKSGVLEKDWITDEKPPFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. ExPASy TrEMBL
Match:
A0A0A0KM37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525230 PE=3 SV=1)
HSP 1 Score: 905.6 bits (2339), Expect = 1.0e-259
Identity = 467/553 (84.45%), Postives = 504/553 (91.14%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M+SSSPFFG EMVVKNRFLGFLIWQ IPST+VF LFK FVSAISSVS NSS+G R+PS
Sbjct: 1 MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
APFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAAP+ELVF LVRFLV GG NA
Sbjct: 61 APFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS KDFRRRA S L++ VVA AVSGSLAAVS+CWGKSDG+RSAW GLLMGLIYG
Sbjct: 121 SSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
FYVYKKRWVLMFPIIQRPPFFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+N
Sbjct: 181 CFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
VTV KFI NQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Sbjct: 241 VTVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALN
Sbjct: 301 ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L +GLEG++D TS LS+QLLPP DS FD+KQL+ LKNFQLYAWCARTVS LTARSH ED+
Sbjct: 361 LGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQLYAWCARTVSTLTARSHVEDR 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTN+QSSH+LFGPA IKWATSSI R+DAS+
Sbjct: 421 FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKK+GPL S AYAIAD+LR SIYLIV+AFH+EM+NSAKSGVLEKDWIT EKPPFGTRE
Sbjct: 481 GKKKNGPLHSKAYAIADVLRVSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDFQA
Sbjct: 541 LLQKLHIFLDFQA 553
BLAST of Sed0002755.1 vs. ExPASy TrEMBL
Match:
A0A6J1IIC5 (uncharacterized protein LOC111477752 OS=Cucurbita maxima OX=3661 GN=LOC111477752 PE=3 SV=1)
HSP 1 Score: 897.5 bits (2318), Expect = 2.8e-257
Identity = 469/553 (84.81%), Postives = 498/553 (90.05%), Query Frame = 0
Query: 1 MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPS 60
M SSS FFG EMVVKNRFLGFLIWQSIPST+VF LFK F+S ISSVS ++SSSG NPS
Sbjct: 1 MPSSSLFFGPPEMVVKNRFLGFLIWQSIPSTIVFFLFKIFISPISSVSVSDSSSGSGNPS 60
Query: 61 APFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLV--GGGNA 120
APFA LLTGFLTFLTFHLSQL+FSASLSLLASPQL RPAAP+EL F LVRFLV GG NA
Sbjct: 61 APFASLLTGFLTFLTFHLSQLLFSASLSLLASPQLERPAAPLELAFVLVRFLVVSGGDNA 120
Query: 121 SSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYG 180
SSAS SKDF RRA S L++ VVA AVSGSLAAVS CWGK+DG+ SAW TGL MGLIYG
Sbjct: 121 SSASASKDFHRRAMVSFYLVLFVVATAVSGSLAAVSTCWGKTDGLSSAWHTGLSMGLIYG 180
Query: 181 SFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRN 240
FYVYKKRWVL FPIIQRPPFFSFKMGFP+AT LASKLS+AAFLFSAVLM LLPD K N
Sbjct: 181 LFYVYKKRWVLTFPIIQRPPFFSFKMGFPSATMLASKLSAAAFLFSAVLMALLPDPLKSN 240
Query: 241 VTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA 300
TV KFIANQAI+FIGSFAVFLSWELTHHLH++LHTKRF FAPPKGSAAAETNPSEYLFA
Sbjct: 241 ATVGKFIANQAILFIGSFAVFLSWELTHHLHQVLHTKRFAFAPPKGSAAAETNPSEYLFA 300
Query: 301 ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALN 360
AL+DSN GSLLQYLAFLDLCMVCE NVDIWRRAAFFEE+GETYKRV+SISL+PLEQFALN
Sbjct: 301 ALDDSNPGSLLQYLAFLDLCMVCETNVDIWRRAAFFEESGETYKRVVSISLRPLEQFALN 360
Query: 361 LCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQ 420
L EGLEG+VD TS LSKQLLPP+DS FDLKQLETLKNFQ+YAWCAR VSMLTARSH EDQ
Sbjct: 361 LGEGLEGAVDITSQLSKQLLPPKDSHFDLKQLETLKNFQVYAWCARAVSMLTARSHVEDQ 420
Query: 421 FGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASI 480
FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKT IQSSHDLFGPA IKWATSSI R+D+S+
Sbjct: 421 FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTCIQSSHDLFGPAGIKWATSSIRRVDSSV 480
Query: 481 SKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREF 540
KKKSGPL SNAYAIAD+LRASIYLIVSAFHDEMLNSAKSGVLEKDWIT EK PFGTRE
Sbjct: 481 GKKKSGPLHSNAYAIADVLRASIYLIVSAFHDEMLNSAKSGVLEKDWITYEKLPFGTREL 540
Query: 541 LLQKLHIFLDFQA 552
LLQKLHIFLDF+A
Sbjct: 541 LLQKLHIFLDFEA 553
BLAST of Sed0002755.1 vs. TAIR 10
Match:
AT1G73240.1 (CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 491.5 bits (1264), Expect = 8.8e-139
Identity = 274/542 (50.55%), Postives = 354/542 (65.31%), Query Frame = 0
Query: 12 EMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFL 71
E VV +RF FLIWQSIPS+ +F F F+ + +S+ ++
Sbjct: 8 ETVVSHRFAAFLIWQSIPSSAIFFFFNIFLFSTTSI-------------------ISFLF 67
Query: 72 TFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRFLVGGGNASSASDSKDFRRRA 131
TFL FH SQL+FS SL+LL+SP P +P++ L R L +FRRRA
Sbjct: 68 TFLVFHSSQLLFSVSLALLSSPTPDSPLSPLQFAVGLHRHL----------SDPEFRRRA 127
Query: 132 TFSLCLLVSVVAMAVSGSLAAVSVCWGKSD--GVRSAWITGLLMGLIYGSFYVYKKRWVL 191
S +++ V A +++G ++ C + GL+ GL+Y +V K+RWVL
Sbjct: 128 RVSSRIVLFVCATSLAGFCSSAVFCLSSDSFGPIGRIGFRGLVTGLLYAVLFVTKQRWVL 187
Query: 192 MFPIIQRPPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQA 251
FPIIQRPPFFSFK+G P+A A KLS ++ S ++++ L D V+V KF+ Q
Sbjct: 188 EFPIIQRPPFFSFKIGLPSALTQALKLSGVLYVLSTIMLLFLLDWSGGLVSVSKFLGEQV 247
Query: 252 IIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFAALEDSNSGSLL 311
+ + GSF + LSWE+THH+H++LHTKRF+FAPPKGSAAAETNPSE L AALE S GSL
Sbjct: 248 LSYAGSFCLILSWEVTHHIHKVLHTKRFSFAPPKGSAAAETNPSEPLLAALEGSAPGSLE 307
Query: 312 QYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDT 371
Q LA+LDL MV +NNVD WRRAAFFEE+ ETYKRVI++ L+PLE+ A L GL+ + T
Sbjct: 308 QSLAYLDLYMVSQNNVDTWRRAAFFEESTETYKRVITLCLRPLEELASKLASGLDHTF-T 367
Query: 372 TSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQFGVAQLSGSNA 431
L PP +S D K E+LK+FQLYAWCA+T + LT+ SH ED+ GVAQLSG NA
Sbjct: 368 EKGYQTPLQPPTESFIDPKFGESLKSFQLYAWCAQTSASLTSISHKEDRLGVAQLSGGNA 427
Query: 432 SVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSN 491
V+STLLS LLAIE MGKKTN+QS L GPASIKWATSS+ R D K+ G + +
Sbjct: 428 DVVSTLLSLLLAIETFMGKKTNLQSPQQLMGPASIKWATSSMVRKDVKPIKRSIGAMYAY 487
Query: 492 AYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDF 551
AYA D+LR S+Y I+S F DEMLNS ++G+L +DWI S+KPPFGT + LLQKL +FL+F
Sbjct: 488 AYAATDVLRISVYQILSTFRDEMLNSDRAGLLGRDWIGSKKPPFGTNDMLLQKLKLFLEF 519
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022146635.1 | 1.8e-263 | 86.26 | uncharacterized protein LOC111015789 [Momordica charantia] | [more] |
KAA0052512.1 | 1.6e-262 | 85.71 | Ndc1_Nup domain-containing protein [Cucumis melo var. makuwa] >TYK13313.1 Ndc1_N... | [more] |
XP_008439582.1 | 2.7e-262 | 85.71 | PREDICTED: uncharacterized protein LOC103484335 [Cucumis melo] | [more] |
XP_038882942.1 | 3.8e-261 | 85.59 | uncharacterized protein LOC120074035 [Benincasa hispida] | [more] |
XP_004134593.1 | 2.1e-259 | 84.45 | uncharacterized protein LOC101219057 [Cucumis sativus] >KGN49437.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CXT0 | 8.9e-264 | 86.26 | uncharacterized protein LOC111015789 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A5D3CN15 | 7.5e-263 | 85.71 | Ndc1_Nup domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A1S3AZ36 | 1.3e-262 | 85.71 | uncharacterized protein LOC103484335 OS=Cucumis melo OX=3656 GN=LOC103484335 PE=... | [more] |
A0A0A0KM37 | 1.0e-259 | 84.45 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525230 PE=3 SV=1 | [more] |
A0A6J1IIC5 | 2.8e-257 | 84.81 | uncharacterized protein LOC111477752 OS=Cucurbita maxima OX=3661 GN=LOC111477752... | [more] |
Match Name | E-value | Identity | Description | |
AT1G73240.1 | 8.8e-139 | 50.55 | CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); H... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Sed0002755 | Sed0002755 | gene |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0002755.1-five_prime_utr | Sed0002755.1-five_prime_utr-LG14:24185826..24185992 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0002755.1-exon | Sed0002755.1-exon-LG14:24185826..24186577 | exon |
Sed0002755.1-exon | Sed0002755.1-exon-LG14:24187514..24187738 | exon |
Sed0002755.1-exon | Sed0002755.1-exon-LG14:24188412..24188792 | exon |
Sed0002755.1-exon | Sed0002755.1-exon-LG14:24189366..24190109 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0002755.1-cds | Sed0002755.1-cds-LG14:24185993..24186577 | CDS |
Sed0002755.1-cds | Sed0002755.1-cds-LG14:24187514..24187738 | CDS |
Sed0002755.1-cds | Sed0002755.1-cds-LG14:24188412..24188792 | CDS |
Sed0002755.1-cds | Sed0002755.1-cds-LG14:24189366..24189830 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0002755.1-three_prime_utr | Sed0002755.1-three_prime_utr-LG14:24189831..24190109 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Sed0002755.1 | Sed0002755.1-protein | polypeptide |