Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAGCTTAGTTGTATTGTGAGAGTAAGGAGGGTAGTTTTGTAATTCTAAGTAGAATATTTTTCAATTACTTTCCATCCACCGCGAAAGGAAGAAGCTTTTGTATCTCTGAAGCTTCCAGGCAGGGCTCTCGAATCAAGCCTTCCTTAATTCTCATCTCTATCCGTTGCATGAAAGGTAAGACGAATTAGGTTACAGAAACATCTTTAATTTGATAATTTCTTGTTAAACTTCATCTTTGGTCTTTCTAATCTGTCTGGAATTCACCATTTTCTGCTTGATTCCTCCCCCATTTCAAGCAAAAGCGAGTATTTCTCCTTTTCTGTTATGACTTCTGCAGCGAACGCGCAAAAAAACGCTTCAAAATCTCATTTTTCTGGTTCCATTTCCTTCAATGGAAAATGGGGTTTTTCTTCTTTTGAACATTTATGGAACCGGTTCTGTTTGAGAGCTATTAGTTTTCGTGTTTATGGGTTTTTAGATCTGTGTTTGCTTATAGAATTTGACTTTGAAGGAATCCGAAAATAGAAATTTGGGATCGCGCCTTTGTGATAAATTTTCGTTCACTGCTATTTGGCGAAGCTTGATTGAGAAGTTTGTCAGTAAAATATAGCCTTTCTGATTGATGAACACATCACCTTTTGGAGTTTGATTGTACTTTATATATCGAAGTTTCATTGTTAAACTGTCATACTTATTGATTCATCATCCATTTCCTCATACGTCTGTGACCTGAAATTTTAGAATGGTTTTTGACTTGGGTTGGTTGCTTCTTGCTTGTAGGTTTTCTATAACCATGAATTGGATACAAAGGAAGATCTACCTTTATAATGTCACATTTGGGTTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAGTATGCTCTCTATCCTAAGGGATATTTGATCTGTTTTATCATTTGCAAGCATACGTAGTACCGTGTTTCAGATTTAAAGTTATGCTGACAATATCTTGTCGAGCCAAATAATTACTGATATTTACTGTTTCTTTTGTTGACATTAAGATTTAATATTGATTTTTCATTATTCGAGTTATGTCCTGCAGTCCTGCTGTGAGGATGATGGATATATGGCTAATGTCGTCTAATTTTTAATCAGGCTTGTTAGGTGTGTCTGTGTCTTATGTTAACTGGATTTAGGCTTTGTCTAGTTAGATGTTGAATTTCATTGGTTCAATAATTGCTGCGAGAATGGATTTAGTTTGTGAAATTCTTCCTTTTCTTTTTCTTACTATTGACCTCTTGAATTATTCGCATATTATTGTAGATACAATGGTGGTTGTGCTGATGTGGTTCATGTTTTACAATGGGTCACGATATGTGAATGATATGTGCAAGAGGTATTGTATTTATTTTTACTCTACCATTTCCTTTTCACAATCGGAAAATAAAACATTTATTACAATTTTGATTGCTCATGTTATAGTAGACATTTGATAATCCTACCACCAAAGAAATTATGGTACCTCTATTTTCATGTGACCTTAGTCCACAAAAGAAAAACAGCGGTTACATATTTGTTCTTCTTTCTGATTTAATAATGACTTTTTAGACCATTAATTTATAAGAATGGAACATACAAGGGGAGAATCTAACTCCAAGGGAATCAAAATAACACAACAGCTCGAAGTAAAGTAATTGAGAGATGAGGAGAGGATAGTTAGAGAGCTCTCTGGAGGGGAAGCTCCAAGAGTGGAATAGCAAAACAATGTCACCCCAAATCTTATAGGGTTCATTTCCTTCATTTATCCTATAATGATCTCCTGTTTATTTGTAACCAACCTTCTGAATAAATAGCCTTATAGTTTCTGAATATTTATGTTTGGCCAATCCAACACAAGTAAAAGAACTTCATGTTGGAGCAAAATAATACTATAACTGTTGTTCGTTTTTTAGTTGGGAACGTCCTCAAAGAAAAGAAGGGAAAAAATGATTTTTTAGTTATCTCAATCTCCTCTCTTATTGAAAAGGATATTTAGTCTTAGGATGTATTTAGGATTGTTTATCAAGTAATGACTTTTGGAATGGATGGAAAATTATTTGGATGCTTGGATCTATACTCTGCAATGGTTTCTTTCATGGCACTTTAAGGTGCTTTTATATATTTATATATATTTGGATACGAGATGGGTATATTCAGAAGAACAAAGTAGAACAGCCTAAGGGCAAGGGACGAGAGGGCCCTTCTCTAGAAAGACTAATAAATTAGGGCCTTCCAATTGTTAAAATTTGTAGGAAAGGCTATAATTGCAGAAGTGTTTGGAGTAGTTGGTACTCCACAAAGAAACTGTGTGTTGAACCACAGTCCAAAAAGAATCAAAAGAATTATATTTATCTTAAAAGATTCTACTACTTCTCTCATTCCAAATGCACTGCAAGAGGGATTGAGTAGCACATCTCCACAGAATGTTGCCCTTCGGACGAAAAACTTTGCTATTGAGCCCTTCAAGCATCCAACTATCAATCTTGCTAGGAAGACAAAAATCGAGAGTGAAAATTCTGAACAACATAGACCAGCCTTTCAGAACAAAGTCACAAAGGAATAAGTGGTTCAAGGTCTCCTTGTTTCTAAAACTAAGGCAGCACATACGAGGGCTCAGAGCAGTGTACTAAAACTTTCTTTGGAGCTTTTCATCGAAAAATTATAGAAAGGCTATTACGAAAGTGTTTGGTTAGGTGCTTAAATTTTTTTTAAAACGAGAAAATTTTTAAATGACCATTGCCAAAGGCACTCTCAAGGATGGCCTTCATCACATATTGCTCCAATTATCGTTTGTCATTCTTACAAAATGCTCTTGAGGCTATCATTTATTATGCTTTTACTTGTGCAAATCTTTGTCTCCTCTAAGTCTCAAACAGTGACTGAGTGACAGTATGGTCAATGGCAACACGAAACCTATTTTATGTTTTAAATCATAGGTTAATCAAGAACGTGATTTTCATACAATCAAAATTCATTTCTATGTTTCGGAATGATCTTAAACATGACAAAAATAATTTTAGCCATTTCAAAAATCATTCCCAAACTTTCAACACACTGTAGATATGAATTATTTCTCAGTTTTTCTTTATCGTTTTCATATGCAGCTGTTGTAATTGATTACTGTTTTGTTTTTGTTATCTAATGCCATACCAACCAGATTGCACTGTTAACCTTTTCTTTCTTATATATCTTCCTTCCATCACATGCTTCTTAGGTATCTGTGGCAAGCCAAGGTGTAGGAGAAGTCCAAGGCTGTCATTAATTTGGATGCAATTTTGCATGCTTATCAATCTTGTAAAGAGATGTCATGTGCTTTGTGTACGGTGTAGTTTTCCCTTTTTGCTTTTAGATAAGCTTCTCTGTTTCTTGAATTTATAGAACAAACTTTGTATTACACACTTGAGATCTGTTTTGAAACTGATTTTCGTATTCGAATGAAATGCTCTGATGAGTTATTAGAGTGTAATCGTTGTTATACTTGGTGAATCTAATGTGGTCAGATTTGAGTAAATACGATGTTTTTCTTGTATTTGCTGTATTTGTTAGATTTGTCACTATGACTTATCTAAATCAGAATTAGACGGTGAAGCCAAAACAAAATGATTTGCTCTCTTGTATTTGAATAAAAGGCAG
mRNA sequence
ATTTAGCTTAGTTGTATTGTGAGAGTAAGGAGGGTAGTTTTGTAATTCTAAGTAGAATATTTTTCAATTACTTTCCATCCACCGCGAAAGGAAGAAGCTTTTGTATCTCTGAAGCTTCCAGGCAGGGCTCTCGAATCAAGCCTTCCTTAATTCTCATCTCTATCCGTTGCATGAAAGGTTTTCTATAACCATGAATTGGATACAAAGGAAGATCTACCTTTATAATGTCACATTTGGGTTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACAATGGTGGTTGTGCTGATGTGGTTCATGTTTTACAATGGGTCACGATATGTGAATGATATGTGCAAGAGGTATCTGTGGCAAGCCAAGGTGTAGGAGAAGTCCAAGGCTGTCATTAATTTGGATGCAATTTTGCATGCTTATCAATCTTGTAAAGAGATGTCATGTGCTTTGTGTACGGTGTAGTTTTCCCTTTTTGCTTTTAGATAAGCTTCTCTGTTTCTTGAATTTATAGAACAAACTTTGTATTACACACTTGAGATCTGTTTTGAAACTGATTTTCGTATTCGAATGAAATGCTCTGATGAGTTATTAGAGTGTAATCGTTGTTATACTTGGTGAATCTAATGTGGTCAGATTTGAGTAAATACGATGTTTTTCTTGTATTTGCTGTATTTGTTAGATTTGTCACTATGACTTATCTAAATCAGAATTAGACGGTGAAGCCAAAACAAAATGATTTGCTCTCTTGTATTTGAATAAAAGGCAG
Coding sequence (CDS)
ATGAATTGGATACAAAGGAAGATCTACCTTTATAATGTCACATTTGGGTTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACAATGGTGGTTGTGCTGATGTGGTTCATGTTTTACAATGGGTCACGATATGTGAATGATATGTGCAAGAGGTATCTGTGGCAAGCCAAGGTGTAG
Protein sequence
MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV
Homology
BLAST of Pay0013151.1 vs. ExPASy TrEMBL
Match:
A0A1S3C9L1 (uncharacterized protein LOC103498548 OS=Cucumis melo OX=3656 GN=LOC103498548 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV
Sbjct: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
BLAST of Pay0013151.1 vs. ExPASy TrEMBL
Match:
A0A6J1JYU1 (uncharacterized protein LOC111489112 OS=Cucurbita maxima OX=3661 GN=LOC111489112 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+ KR+LWQ KV
Sbjct: 1 MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLWQGKV 60
BLAST of Pay0013151.1 vs. ExPASy TrEMBL
Match:
A0A6J1FLX2 (uncharacterized protein LOC111445419 OS=Cucurbita moschata OX=3662 GN=LOC111445419 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+ KR+LWQ KV
Sbjct: 1 MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLWQGKV 60
BLAST of Pay0013151.1 vs. ExPASy TrEMBL
Match:
A0A6J1BY20 (uncharacterized protein LOC111006754 OS=Momordica charantia OX=3673 GN=LOC111006754 PE=4 SV=1)
HSP 1 Score: 112.5 bits (280), Expect = 6.3e-22
Identity = 50/53 (94.34%), Postives = 53/53 (100.00%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKR 54
MNWIQRKIYLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGS+YVND+CKR
Sbjct: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSQYVNDLCKR 53
BLAST of Pay0013151.1 vs. ExPASy TrEMBL
Match:
A0A6P5SRN0 (uncharacterized protein LOC110758739 OS=Prunus avium OX=42229 GN=LOC110758739 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLW 57
MNW+QRKIYLYNVTFGLYMLDWWER LFNT+VVVLMWF+FYNGSRYV + CKR+LW
Sbjct: 1 MNWVQRKIYLYNVTFGLYMLDWWERYLFNTLVVVLMWFIFYNGSRYVTEFCKRHLW 56
BLAST of Pay0013151.1 vs. NCBI nr
Match:
XP_008459402.1 (PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo] >XP_008459403.1 PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo] >XP_016902393.1 PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo])
HSP 1 Score: 131.3 bits (329), Expect = 2.7e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV
Sbjct: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
BLAST of Pay0013151.1 vs. NCBI nr
Match:
XP_004141475.1 (uncharacterized protein LOC101207494 [Cucumis sativus] >KAE8648948.1 hypothetical protein Csa_008788 [Cucumis sativus])
HSP 1 Score: 129.8 bits (325), Expect = 7.9e-27
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAK 60
MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAK
Sbjct: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAK 59
BLAST of Pay0013151.1 vs. NCBI nr
Match:
XP_038889912.1 (uncharacterized protein LOC120079682 [Benincasa hispida])
HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 56/60 (93.33%), Postives = 59/60 (98.33%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
MNWIQRKIYLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+CKR+LWQ KV
Sbjct: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKRHLWQGKV 60
BLAST of Pay0013151.1 vs. NCBI nr
Match:
XP_022939543.1 (uncharacterized protein LOC111445419 [Cucurbita moschata] >XP_022992929.1 uncharacterized protein LOC111489112 [Cucurbita maxima])
HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+ KR+LWQ KV
Sbjct: 1 MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLWQGKV 60
BLAST of Pay0013151.1 vs. NCBI nr
Match:
KAG6578536.1 (hypothetical protein SDJN03_22984, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYLWQAKV 60
MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+ KR+LWQ KV
Sbjct: 50 MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRHLWQGKV 109
BLAST of Pay0013151.1 vs. TAIR 10
Match:
AT2G30942.1 (Protein of unknown function (DUF3317) )
HSP 1 Score: 101.3 bits (251), Expect = 2.8e-22
Identity = 42/55 (76.36%), Postives = 52/55 (94.55%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYL 56
MNW+QRKIYLYNVTFGLYMLDWWER LFN++V++LMWF+ YNGSRY +++CKR+L
Sbjct: 1 MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVLILMWFILYNGSRYFSELCKRHL 55
BLAST of Pay0013151.1 vs. TAIR 10
Match:
AT1G06515.1 (Protein of unknown function (DUF3317) )
HSP 1 Score: 95.9 bits (237), Expect = 1.2e-20
Identity = 41/55 (74.55%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYL 56
MNW+QRKIYLYNVTFGLYMLDWWER LFN++VVVLMWF+ YNG+RY +++ +R+L
Sbjct: 1 MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVVVLMWFVLYNGTRYFSELFQRHL 55
BLAST of Pay0013151.1 vs. TAIR 10
Match:
AT1G06515.2 (Protein of unknown function (DUF3317) )
HSP 1 Score: 95.9 bits (237), Expect = 1.2e-20
Identity = 41/55 (74.55%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 1 MNWIQRKIYLYNVTFGLYMLDWWERILFNTMVVVLMWFMFYNGSRYVNDMCKRYL 56
MNW+QRKIYLYNVTFGLYMLDWWER LFN++VVVLMWF+ YNG+RY +++ +R+L
Sbjct: 1 MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVVVLMWFVLYNGTRYFSELFQRHL 55
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3C9L1 | 1.3e-27 | 100.00 | uncharacterized protein LOC103498548 OS=Cucumis melo OX=3656 GN=LOC103498548 PE=... | [more] |
A0A6J1JYU1 | 1.8e-24 | 90.00 | uncharacterized protein LOC111489112 OS=Cucurbita maxima OX=3661 GN=LOC111489112... | [more] |
A0A6J1FLX2 | 1.8e-24 | 90.00 | uncharacterized protein LOC111445419 OS=Cucurbita moschata OX=3662 GN=LOC1114454... | [more] |
A0A6J1BY20 | 6.3e-22 | 94.34 | uncharacterized protein LOC111006754 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A6P5SRN0 | 1.4e-21 | 85.71 | uncharacterized protein LOC110758739 OS=Prunus avium OX=42229 GN=LOC110758739 PE... | [more] |
Match Name | E-value | Identity | Description | |
XP_008459402.1 | 2.7e-27 | 100.00 | PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo] >XP_008459403.1 P... | [more] |
XP_004141475.1 | 7.9e-27 | 100.00 | uncharacterized protein LOC101207494 [Cucumis sativus] >KAE8648948.1 hypothetica... | [more] |
XP_038889912.1 | 1.5e-25 | 93.33 | uncharacterized protein LOC120079682 [Benincasa hispida] | [more] |
XP_022939543.1 | 3.7e-24 | 90.00 | uncharacterized protein LOC111445419 [Cucurbita moschata] >XP_022992929.1 unchar... | [more] |
KAG6578536.1 | 3.7e-24 | 90.00 | hypothetical protein SDJN03_22984, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Pay0013151 | Pay0013151 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Pay0013151.1-exon | Pay0013151.1-exon-chr09:1783695..1784113 | exon |
Pay0013151.1-exon | Pay0013151.1-exon-chr09:1785971..1786043 | exon |
Pay0013151.1-exon | Pay0013151.1-exon-chr09:1786453..1786550 | exon |
Pay0013151.1-exon | Pay0013151.1-exon-chr09:1787157..1787333 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Pay0013151.1-three_prime_utr | Pay0013151.1-three_prime_utr-chr09:1783695..1784088 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Pay0013151.1-cds | Pay0013151.1-cds-chr09:1784089..1784113 | CDS |
Pay0013151.1-cds | Pay0013151.1-cds-chr09:1785971..1786043 | CDS |
Pay0013151.1-cds | Pay0013151.1-cds-chr09:1786453..1786537 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Pay0013151.1-five_prime_utr | Pay0013151.1-five_prime_utr-chr09:1786538..1786550 | five_prime_UTR |
Pay0013151.1-five_prime_utr | Pay0013151.1-five_prime_utr-chr09:1787157..1787333 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Pay0013151.1 | Pay0013151.1-protein | polypeptide |