Pay0011925.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0011925.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr06: 33939988 .. 33944885 (+)
Sequence length	1589
RNA-Seq Expression	Pay0011925.1
Synteny	Pay0011925.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAACACGCCTAACCTAATTTTAACTATAACTTCCCTCTCCGAACAACAACGGCAAAGTTCAACGATCCTCAATTCTTATCATAGTTCTACAAGTTCAGACCTTCTCGCCGCACCAACGACCGAAGCACGTGGTTGCACCGCCGTAGCTCCGCCGCTCGTTCGAATTAGGTCATGGAACTCTAGCTCGTGATGCACGCTCTTGTACCATTCTTACGATGCAATGCCGAAAGCTCCATAGCCATGCGAATCAACGCCTCAATCCCAATCTCTTGTAGGTTTCCTTTCTTTCTTTCTTTCTTTCTTACTTTCTTGCAACGATCGGGAAAACTGATTATTTTTCTTCGCTATTTTTCTTTCACAGTTTTGTTTGTATTTTAAGTTATTTAAAATTTTAGTTTTCTCCCGGACTCACTTTAAATCGATTTTTTTTCTTTTTTTTTTTTTTCAATTTCAAAAGTGTGAAAATAAATGGTTATAACATCCATTTTTAGGGAAATTGTAAGAAAGAAAATATTCGACGAAATGTTATAGAAAAATCCAAATGGAATTATTTTTCTTTTAATAATTTTGTTTCATGGTGTAGAAATAGTTTGTCAATTTTTTATTTTAAAAAAATTACATTCTTTTTATTCAATGTGATTTTAATAAATTACATATTAAAAAAATAATGTTTTGATTTGTTTTGAACCTAAGTGTAATATATATATTGGATTGATATATATATATACACATAGTATATTATGGTTCATTTAAAAAAACAAGAGGTTTAAAAATAAACGTTTTAGCCCTAAAAGTTTTAAAAATATTTTAAATAGTCCTTGAATCAACTTTGGTTTAACTAACAAAACGTGACATATTGAATTGACAAAATTTTAACGAGATGGTATTAATAATTTGCTAATTCAATACGTAACTTAGTCAATTAACGACCAAAGTTATAATTAATTGAGGATCATTTATAAGTATTTTTTAATCTTCGAAGACTAAAGCGTTGGTTTTTAAATTTCAACTATCAAATAAACACTAACTTCAAACTTTGATGACTAAAAATATATGCTGGAAAAAGAAATTATATTGACTACGATAAACATGATTTCAAAACTCTTAATTTTCTATCGTTTTTACTCTTTGATATTTTTGCTATTTACTATTCATTATCACATAGTCTACGCACAAAATATATACTATTATAATTCAAATTAAAATTAACATATGGGTCTGTCACAGCTACCCTGAAATTTCGTATAGGATTTGCTCCTCAGAGTTTAAATATATATTTTTTGGAGCGGTTAAAAAACCTCTCTCCTATAAAAAGATAATTCCCTCCAATTTAGTCTAAAAAACTTCCCTCCAATTTACGTCGATCGGTGGGAAAGCTCAACCTCATTCCACCATTTGCCGAAAGCGCTTCGTCTCCTCGATATCTCGTAAGATAATCCCAACCTCTGAAATTTCTTCTACTTTTTCCTTGCTGTGGATCGCTAATCGAAATACTATTCATCTAATCGCAGATCAAACCAATGTCCACACCGATCGCAAGTTGCAATAAGCCTTCTCCTGGTGTAATCGCCTCCCCGGTCGTTGGATTTATCACTTCGGAGCATGATTTCGACATCGAGGTAAGTAAATTTCAGTTTACTAGCTAATAATCGCCCTTAACCCGAATAAATTATTCTGTTATTTGAGTGCGATATCTGTATTTAGCTGGATGAACTCAACGATGGATTTATTTGCGGTTTATATTCTTTAGGATTTCCATCATCTCTTACTGTTTTGTTTGAATCTCTCTGAGACTAGTCGTTTCTGATTTCATCCATATAAGAAAAGACCTGCTCTAATTGAGTTTTGTAGAGAACGAATTTTGGTATTGAATAATCGGAGTTCTCCTTATCCAAATTGACCGTAGGAACAACACAATTAAGCTTCGGTCGTTTTTTGATAATTTCTCATGTATCTACAAGACTCACAATATTAATCGATCGAAGGCCAATGCTACCACACTTGTCTGTTAGATTAACATAGCCATAGGGCATGAAGAACAATTTCATCCCTTTTACAATAGCTAGTACATATAGGTTAGATTATAAGTTTGGTATGTCGACTTTTAGGATTGTTTTAATTTATCTCTCTATTCAATTGTGTGTCTTATGTGTGATTTACATGTTTATCAAGCATCTCGATTAATTTTTGAGATATTTTTTGAAGTTTAAGGATTTGTTATGACAATTTAAGAGCTTATGACTAAGCTTACAATTCAATTCTAACCACACATGGATCATCATCTACAACCTTCTTTTCCCAAAGATGACAACCAGTTGAAATCATGCTTGAGCAAAAGCTCTTCATAATAATTAGGTCGAATCATCGACCTTTAGAATGATAACCGAAGCGATTCTCTTTTGAATTGCGCTTAGTTTGACTGAAGAGCATCAACTTTCATAGGGTAGATGGAGGAACAAGTGAAGAGATGGGGTATCATAAAAGTGAAATGATTGCTTGAGGGTAATTTAAAAGTGAATTTATCAGCTCGAAGCCAATTCTTCATTTCATCAAGAGAATTCTTGTCATAACGTCGAATGAGCCGATCTTCAACAAGGCTCTTTCTACTAGAATATTCTTCATTATTGGTTTGAGCATCGTCTTAGCTACAAAATTCTAGTTTTGATCAGATTCTCATTGACTTTTTGGTTCCAATTAGAAGGCAAGAAAATATGCTATCCAGTGGCAATTTAGGAGGAGAGAATAAACCTGAAAAGTGATCTTCCTGCACCTATCCTTTTACTAAGATATAAATTCTAATACGCCACCTTGTCCTCCTTTGAGCGACATTTTTAACCGGGAATACTTCATGTAAGTGAAAGACTATCCAAATTTTGCATCCAATAAAATACCTTTAGAAAAAAATGGATTTAACAGGGTGTTGGTTTGTATTATAATAGTTCGTGGAAGGTAGGATATAAGATCGGAAGTGAAGGTGAATAGAAACTAATAAACATTATAATAAATATTAAAAACTATAGCAAATAATGATTTGAAATAGTAATATTGTAGTTGGTTGTAGATTATAATAGTTGAAAACATCAACTATTTTAATTGAAAAACTAAACATTGAGTGGACTAAAATAGTTTGCTCGAAAAAAGTCAAGTTGGAAATCAAACACTTTCCTATAGGTTATGGAAAACTAAATGGAAAGGTTTAATTTCCAAGAATCTTCACATGTGCCTAGCCAGTGTAGCATGATTAAATTAATGGAATTCCCTGTGAGTTAATTTTGAGATATTAAGTTCAAGATTTATGGAAAGTACGATAATTAAAATTGGACAATTAAAGTATAAATAAAAAAATTGAACAAATTTTCAAATATGGAGACTAAATGGTATTTTTCAAAATTTAACTTTATGTCGAATATATTTATTAATTTAAATGGTGAATACACCGGCAAGTTATAGAATCTAAAAATTGAAAGTCGGAAAACACACGATCGAAAATTCAAATACATATTTAATACAAACTTGAAAGTTTCATAGGCGAAACCTGTAGTTCAATCTATTCTTTTAAACTTATTAGTAAAGTATTGTTTTAAAATTAAAGTACATATTGTTCTGCAGACATAATACCATTTCTGTAATATTTTAGGGTTTCTTGGTTTGACTTTCAATATAACAGGAAATTTGGTGTCACAAGGAGTCTTTTTTCTTTTTTTGCTAAGAACGAGGTCTCTCAGACATGTCAAAGTTTGCTGTCTGTCCTGATGGTCTCAGCTCTTCTCCCATAAACTTTCACCGAATTTCTACTTCCCTGTTTGATTTGTGGCTTGAATACTGGAAAAAGGGGAAATTCTAATTTAGTACCCATAATTTACAATTATAACTTTGTTCTAACTATAGTTTGTCATTTGTAAAGGAAAGACCGACTGATTTGAGGCTTCCTTTTACATTTCTCAAACCTTTGTTTAAGCGACTCTTATCAGCTTTCTTTGAGTGTATGGCCCACTAAACCTTGAAGACAAATTAAAAGAAGATAAAGAGAAAAAAGGGGTCTCACTGCTTCAATCTTCTCTTGGAAAAGATTCATTCAATTGGAATTGGACTGCCTTTTAAAAAGAATTGAGAAGGACACTGATTTAAGGCAACATCTTGATTTTATAGATTCCTTCATAAAAAGAAAACTCCTTCCATCCATCATTTTTTATAGAGTGCCCCCACTCCATTCTCCTCATTGCTTTTAATCATATACTATCATATTGTTTGAGATTAGTCTGCCTCAAATATAATTCCATTGCTCTGGGTTTCAACTCTCTACTAAACTTTATGTAAAGACACAATTATTGAAAGTGATTGTAAAATGTTTAAAATCATTTTTTATTTTTTGAAGAGCTGATTAAAGAAAATGGTTCAAAATTATTTTCTTACAAAGATCATGCTTGAAATTGATTTGTTATAAAGATCATGTTTGAGGTGTTTGAGATCCAGTATTATAGTCTATGGATTACAAATCTATAGACTAAAGACTATAAACTTATAATAGCTTTTGTGTTTGGAGGAAATAGATACTTGTGGGCTTCTTTTAGTAGTATATATCTTTCCCAACCTACATACACCAACCATTTGCTTCAAGCTAAAGTTTTTTTTTAGAAAAAAAAATCCAAATTTTGCTATTAATTTTTTTTAGATAAAAAGAGAAGACACCCAAATCCATTCAAAAGTTGCAAATGTGCTTCTTGATCTTTCTAAATTTTAAAATTAGCAATATAAATTAAAATTAAGACTTGAAATGGAAGTGAG

mRNA sequence

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAACACGCCTAACCTAATTTTAACTATAACTTCCCTCTCCGAACAACAACGGCAAAGTTCAACGATCCTCAATTCTTATCATAGTTCTACAAGTTCAGACCTTCTCGCCGCACCAACGACCGAAGCACGTGGTTGCACCGCCGTAGCTCCGCCGCTCTCTAAAAAACTTCCCTCCAATTTACGTCGATCGGTGGGAAAGCTCAACCTCATTCCACCATTTGCCGAAAGCGCTTCGTCTCCTCGATATCTCATCAAACCAATGTCCACACCGATCGCAAGTTGCAATAAGCCTTCTCCTGGTGTAATCGCCTCCCCGGTCGTTGGATTTATCACTTCGGAGCATGATTTCGACATCGAGGAAATTTGGTGTCACAAGGAGTCTTTTTTCTTTTTTTGCTAAGAACGAGGTCTCTCAGACATGTCAAAGTTTGCTGTCTGTCCTGATGGTCTCAGCTCTTCTCCCATAAACTTTCACCGAATTTCTACTTCCCTGTTTGATTTGTGGCTTGAATACTGGAAAAAGGGGAAATTCTAATTTAGTACCCATAATTTACAATTATAACTTTGTTCTAACTATAGTTTGTCATTTGTAAAGGAAAGACCGACTGATTTGAGGCTTCCTTTTACATTTCTCAAACCTTTGTTTAAGCGACTCTTATCAGCTTTCTTTGAGTGTATGGCCCACTAAACCTTGAAGACAAATTAAAAGAAGATAAAGAGAAAAAAGGGGTCTCACTGCTTCAATCTTCTCTTGGAAAAGATTCATTCAATTGGAATTGGACTGCCTTTTAAAAAGAATTGAGAAGGACACTGATTTAAGGCAACATCTTGATTTTATAGATTCCTTCATAAAAAGAAAACTCCTTCCATCCATCATTTTTTATAGAGTGCCCCCACTCCATTCTCCTCATTGCTTTTAATCATATACTATCATATTGTTTGAGATTAGTCTGCCTCAAATATAATTCCATTGCTCTGGGTTTCAACTCTCTACTAAACTTTATGTAAAGACACAATTATTGAAAGTGATTGTAAAATGTTTAAAATCATTTTTTATTTTTTGAAGAGCTGATTAAAGAAAATGGTTCAAAATTATTTTCTTACAAAGATCATGCTTGAAATTGATTTGTTATAAAGATCATGTTTGAGGTGTTTGAGATCCAGTATTATAGTCTATGGATTACAAATCTATAGACTAAAGACTATAAACTTATAATAGCTTTTGTGTTTGGAGGAAATAGATACTTGTGGGCTTCTTTTAGTAGTATATATCTTTCCCAACCTACATACACCAACCATTTGCTTCAAGCTAAAGTTTTTTTTTAGAAAAAAAAATCCAAATTTTGCTATTAATTTTTTTTAGATAAAAAGAGAAGACACCCAAATCCATTCAAAAGTTGCAAATGTGCTTCTTGATCTTTCTAAATTTTAAAATTAGCAATATAAATTAAAATTAAGACTTGAAATGGAAGTGAG

Coding sequence (CDS)

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAACACGCCTAACCTAATTTTAACTATAACTTCCCTCTCCGAACAACAACGGCAAAGTTCAACGATCCTCAATTCTTATCATAGTTCTACAAGTTCAGACCTTCTCGCCGCACCAACGACCGAAGCACGTGGTTGCACCGCCGTAGCTCCGCCGCTCTCTAAAAAACTTCCCTCCAATTTACGTCGATCGGTGGGAAAGCTCAACCTCATTCCACCATTTGCCGAAAGCGCTTCGTCTCCTCGATATCTCATCAAACCAATGTCCACACCGATCGCAAGTTGCAATAAGCCTTCTCCTGGTGTAATCGCCTCCCCGGTCGTTGGATTTATCACTTCGGAGCATGATTTCGACATCGAGGAAATTTGGTGTCACAAGGAGTCTTTTTTCTTTTTTTGCTAA

Protein sequence

MASFPITSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLILTITSLSEQQRQSSTILNSYHSSTSSDLLAAPTTEARGCTAVAPPLSKKLPSNLRRSVGKLNLIPPFAESASSPRYLIKPMSTPIASCNKPSPGVIASPVVGFITSEHDFDIEEIWCHKESFFFFC

Homology

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BLAST of Pay0011925.1 vs. NCBI nr
Match: KAE8650057.1 (hypothetical protein Csa_023702 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-16
Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 1  MASFPITSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLILTITSLSEQQRQSSTI 60
          MASFPI+SPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLI TITSLSEQQR S+  
Sbjct: 1  MASFPISSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLISTITSLSEQQR-STEF 60

Query: 61 LNSYHSSTSSDLLAAPTTEAR 82
            S  ++  S  L   ++ AR
Sbjct: 61 RPSRRTNARSTWLRRRSSAAR 80

The following BLAST results are available for this feature:

BLAST of Pay0011925.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0011925.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0011925.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650057.1	2.7e-16	72.84	hypothetical protein Csa_023702 [Cucumis sativus]	[more]

BLAST of Pay0011925.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0011925	Pay0011925	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011925.1-exon	Pay0011925.1-exon-chr06:33939988..33940257	exon
Pay0011925.1-exon	Pay0011925.1-exon-chr06:33941435..33941527	exon
Pay0011925.1-exon	Pay0011925.1-exon-chr06:33941612..33941719	exon
Pay0011925.1-exon	Pay0011925.1-exon-chr06:33943768..33944885	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011925.1-cds	Pay0011925.1-cds-chr06:33939988..33940257	CDS
Pay0011925.1-cds	Pay0011925.1-cds-chr06:33941435..33941527	CDS
Pay0011925.1-cds	Pay0011925.1-cds-chr06:33941612..33941719	CDS
Pay0011925.1-cds	Pay0011925.1-cds-chr06:33943768..33943809	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011925.1-three_prime_utr	Pay0011925.1-three_prime_utr-chr06:33943810..33944885	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0011925.1	Pay0011925.1-protein	polypeptide