Pay0005786.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0005786.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ribonuclease III domain-containing protein RNC1, chloroplastic
Location	Contig00140_ERROPOS1134973: 5575 .. 9337 (+)
Sequence length	1548
RNA-Seq Expression	Pay0005786.1
Synteny	Pay0005786.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAGTTCCTCGTAACCCAAGTTCTTAATGTTCGGCCCCTCGCGTTTCGATTAAAACCACCCAGCATTATCTTCACTATTCACAACCAATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCTCCTTCTCCTAATTACTCTTTCTCATCTTATTTAACAGCTCGTTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACTCCTCGTCGGGTAATTTACGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAAATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCACGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGATCCATCCGATAGTTATGGAGATGACAATCCTGCAAAACAATTTGATACCTTGTTGTACTTGGCCTTTCAGCACCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTGTTTTTGGGTCAATATGTAATCGAATTGGCGCTGGCTGAGTATTTTCTTCTGAGGTATCCAAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGATATGGACAAAATGATTAGGAAGGACCGGGAACCACCAGTGAAGTAAGTTTGGTATTGTCTTTTAATTTTTTTTAGTTATTTTCTCCCGTTGTAAATAATTCTGTGAATAAGATAATTTTAAGAGATGTTTTTTGCTGGAAAGCCATGTCATTGATATGTTTAACCCCATTTTAAGTTTTAGAAGAATCACAGAATGTGGTATCATCATGATCTTACTGAAAAGTACCAAATGCTTTATGGAAGTTGATTGTGCAATATGATGGTTATGTAATGCATGGTTCACTAGGAACTCGGATTTCTGGGCCAGAAGAGACATTAAGAAGTTGGCTTTTGATTAAGGTAAACGTTGAAGGCATGCTCCTGGCATTCTAAAGTTAGGTAGCTTAGATATCACATTCGTGGACAATGAGCTTCGTCATATAGATGGTCCCCATTTTGTGAAGATGACACTACAAAAGCTCAGCTAAGAGACAGTGCTAAGGAAGTTGTTCCACTGGGAATGTGGCATAAAACCTTGATTTAGAGATTTTATATAGGTGGTTTGGTGCCATGGGGTAAATTCTTTGTGAACCCGAACTTTGGTGAACCTAGCACCAGACATTCTTTCCTCAAATCTAGTACCTGCAGACTATGTAGTCCACTTCATGAATCTGCTTCAATAATAATTTGTCCATCCTTCACAAACTTGCTTCCAGGCTGCTATGATTACTTTTACCAACATGGCTTTCCGTTTGCCTCTTTTTGGCAAATGTAGCTTTTATACCACTTGTCACATGTCAAATATGTGGTGAGACTTGCTATTGTATTGAGGGAATTGGGAGATTGGGTTTTCTTTACCCACTCTACTAATGTACTTCGTTTGTAGGTCCTATCTTTGTTTGCATGATTCATCAAATTCATGTTTTAGTATGATGCAAGATGTACTATAGGTTACGTAGTGAAACGTGTGTTGTTTCATAATTCATTTAACTTCTGTTTAGCCTATGGGGTACCTGATATAACTTTTTTTTTCATTTTCGTTTTCCTTTCATTTTGTGTTCTTTGTTAATTCTTGTTACCAATGCCCTGAAAGCAGCAAGGGTTGGGAAGAAAATGCTAGATATAAATTGTGAGTGTGGTTTTACATCATATCATGGTATTACTTTCTGTTGCATATCTGGTGACCTACTTGCACTTAATTGGTAAATTAGTAGCTTAGACTTAGGAATAAAACTCCTGCTCATTCTCTTTCTAAAATAGTTTGGTTCAGCATACTATTTCAACAATGTGAGCCTAAAATTAATTTTCTTCGAGCAGATCTGTATTTTGGGCGTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGAGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAGAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGATCTCCTATAAGGTAAGTTTCATGTTTTTTTTAACAGCACAGTAAACTATTGTTCTATTATTTATCCTTCTTAATAATGAATCCACTCTTGTAATTGTGATCTCTCATTTTTCAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTCCGAGCTTGTGTCCCACCCGGCATGCATCGATTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTGTTGATAAAATTCCTGACATCACAGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGGTATCGCCCACCCCACACAGACACACGACTTTTCTTCTCTCATTCATAACCACGTGAGATCGTATTATTATACATTCTCAATGTCAATTTTTATTGGCTTGTACGTTTGGATGTGTTTATCATCATGGCTGATCTTGAACTTTTTTATATCTTACGTGTGAAGGAGGATTTTTAAGGCTCCGATCGGTAACTATTTGATTTTTATTTTTAGTTTTGAAAATTAACTCTATTTTCTTCTAATTTCTTACGATAACTTGTATCTTTCTAAGTACAACTTCAATTCTAGCCATATTTCAATAACAAAAGTTTTTTCTTTAGTTATTTCAAATCTTTGTCTGGTGTTTTGAACCAACCGAAAGGCAGAATTTATCAGGTGAAAATGATTGTTTATAGTTTAATTTTAAAACCTAAAACCCAACAATTACCAAATGGGCCCACTGCATGTAATGTTGAATTCTGCTTGCTTGATATTGATCAGTGATTCGATATAATGGTTTTAACTTTTAAGTACCTTTTTAGGCTATATGTAAATTTTATGGAACGGCATGATCAAGCTAATCTCAGGCAATTTCTTAATCAAATGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGTAAGACTCTTTCTTAAATTTCTTAGGGAGGACGAACTACTTTATCTCTATCAAAATCCTATTCTTGATGTTTGGATCAAGAAACTAACTTATGGTGGTCGGTCCTATTGTGTTTGTTCAAGGATATCGTGATGGCCGAGAGACTGTTGATGAAACATTTAGATGCTCCTGGAAAGTGGTTGCAGGAGAAGCACCGGCGATTACTCATGAACAAATTTTGCGGACGGTATTTGAGGGAAAAATATCTTCATAAACTTATCATCTATTCTGAAAAAGTACAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTCTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

mRNA sequence

ATGTCCAGTTCCTCCTCGTTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACTCCTCGTCGGGTAATTTACGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAAATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCACGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGATCCATCCGATAGTTATGGAGATGACAATCCTGCAAAACAATTTGATACCTTGTTGTACTTGGCCTTTCAGCACCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTGTTTTTGGGTCAATATGTAATCGAATTGGCGCTGGCTGAGTATTTTCTTCTGAGGTATCCAAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGATATGGACAAAATGATTAGGAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCGTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGAGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAGAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGATCTCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTCCGAGCTTGTGTCCCACCCGGCATGCATCGATTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTGTTGATAAAATTCCTGACATCACAGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCGTGATGGCCGAGAGACTGTTGATGAAACATTTAGATGCTCCTGGAAAGTGGTTGCAGGAGAAGCACCGGCGATTACTCATGAACAAATTTTGCGGACGGTATTTGAGGGAAAAATATCTTCATAAACTTATCATCTATTCTGAAAAAGTACAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTCTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

Coding sequence (CDS)

ATGTCCAGTTCCTCCTCGTTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACTCCTCGTCGGGTAATTTACGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAAATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCACGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGATCCATCCGATAGTTATGGAGATGACAATCCTGCAAAACAATTTGATACCTTGTTGTACTTGGCCTTTCAGCACCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTGTTTTTGGGTCAATATGTAATCGAATTGGCGCTGGCTGAGTATTTTCTTCTGAGGTATCCAAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGATATGGACAAAATGATTAGGAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCGTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGAGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAGAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGATCTCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTCCGAGCTTGTGTCCCACCCGGCATGCATCGATTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTGTTGATAAAATTCCTGACATCACAGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCGTGATGGCCGAGAGACTGTTGATGAAACATTTAGATGCTCCTGGAAAGTGGTTGCAGGAGAAGCACCGGCGATTACTCATGAACAAATTTTGCGGACGGTATTTGAGGGAAAAATATCTTCATAAACTTATCATCTATTCTGAAAAAGTACAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTCTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

Protein sequence

MSSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

Homology

[Close]

BLAST of Pay0005786.1 vs. ExPASy Swiss-Prot
Match: Q9SZV0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RNC1 PE=2 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 1.1e-257
Identity = 425/515 (82.52%), Postives = 464/515 (90.10%), Query Frame = 0


Query: 1   MSSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSP 60
           +S SSS          I   S   NLRI A      Q LP+++PQRLLKELA+RK AT P
Sbjct: 23  ISFSSSISQFPSKTQSILTKSRFQNLRICASVTAETQGLPRDSPQRLLKELAQRKTATGP 82

Query: 61  KKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLL 120
           KKKVPP+RFILRPPLDDKKLAERFLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLL
Sbjct: 83  KKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLPSSKLNNADKTWIDEYLL 142

Query: 121 EAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV 180
           E KQALGY L+PS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL FLGQYV
Sbjct: 143 EVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARARHVKNGHSRLWFLGQYV 202

Query: 181 IELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKD 240
           +ELAL E+FL RYPRESPGPMRERVFALIGKR LPKWIKAASLQNLIFPYDDMDK+IRK+
Sbjct: 203 LELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASLQNLIFPYDDMDKLIRKE 262

Query: 241 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEF 300
           REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+EC+PR RRQLEDVDYVSVEF
Sbjct: 263 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQPRSRRQLEDVDYVSVEF 322

Query: 301 EDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLP 360
           E K++ WQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P+VMQ LGYPL 
Sbjct: 323 EGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDFDSKPKVMQTLGYPLT 382

Query: 361 VVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLM 420
           + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLM
Sbjct: 383 MNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLEYVGQKIQDIAMAERLLM 442

Query: 421 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAV 480
           KHLDAPGKWLQEKHRRLLMNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAV
Sbjct: 443 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAV 502

Query: 481 QQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 503 QQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537

[Close]

BLAST of Pay0005786.1 vs. ExPASy Swiss-Prot
Match: Q8S1Z0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RNC1 PE=2 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 3.4e-238
Identity = 389/505 (77.03%), Postives = 444/505 (87.92%), Query Frame = 0


Query: 26  LRIFAVAVD---------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLD 85
           +R+ AVA D              P N+P RLL+ELAERK+A SPKKK PPRRFIL+PPLD
Sbjct: 29  VRVLAVAADHTPPPPPSPSSPPEPANSPSRLLRELAERKKAVSPKKKHPPRRFILKPPLD 88

Query: 86  DKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSY 145
           D++L +RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYPL PS++ 
Sbjct: 89  DERLTQRFLSSPQLSLKALPLLSSCLPSAPLSAADRTWMDEYLLEAKQALGYPLAPSETL 148

Query: 146 GDDN----PAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELALAEYFL 205
           GD +    PA+ FD LLYLAFQH   SCERT+ RH+RSGHSRL FLGQYV+ELA  E+FL
Sbjct: 149 GDGDDDGCPARHFDVLLYLAFQHLDTSCERTRTRHVRSGHSRLWFLGQYVLELAFCEFFL 208

Query: 206 LRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFW 265
            RYPRESPGPMRERVFALIGKR +PKWIKAASL NL+FPYDD+DKMIRKDREPP K+VFW
Sbjct: 209 QRYPRESPGPMRERVFALIGKRAIPKWIKAASLHNLVFPYDDLDKMIRKDREPPAKAVFW 268

Query: 266 ALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDM 325
           ALFGAIYLCFGMPEVYRVLFE FGMDP+ E C+P+LRRQLEDVDYVSVEFE ++++WQD+
Sbjct: 269 ALFGAIYLCFGMPEVYRVLFEAFGMDPEDESCQPKLRRQLEDVDYVSVEFEKRQLTWQDV 328

Query: 326 ISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVVDKIPDITE 385
            +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+D+RP+VM  LGYPLP+ D+IP+ITE
Sbjct: 329 AAYRPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDNRPKVMNTLGYPLPMNDRIPEITE 388

Query: 386 ARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWL 445
           ARNIELGLGLQLCFLHPSKHKFEHPRFC ERLEY+GQKIQD+VMAERLLMKHLDAPG+WL
Sbjct: 389 ARNIELGLGLQLCFLHPSKHKFEHPRFCLERLEYVGQKIQDLVMAERLLMKHLDAPGRWL 448

Query: 446 QEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYV 505
            EKHRRLLMNK+CGRYLR+K+LH  IIY E VQD +E+NRRLRNP+TTAVQQA+HGL+Y 
Sbjct: 449 AEKHRRLLMNKYCGRYLRDKHLHHYIIYGESVQDRFEHNRRLRNPSTTAVQQAIHGLAYC 508

Query: 506 VYGKPDVRRLMFEVFDFEQIQPKAV 516
           VYGKPDVRRLMFEVFDFEQ+QPKAV
Sbjct: 509 VYGKPDVRRLMFEVFDFEQVQPKAV 533

[Close]

BLAST of Pay0005786.1 vs. ExPASy Swiss-Prot
Match: A6YSL1 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=4577 GN=RNC1 PE=1 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 4.4e-238
Identity = 391/510 (76.67%), Postives = 448/510 (87.84%), Query Frame = 0


Query: 16  PIFPNSSSGNLRIFAVAVD------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRF 75
           P   +SSS  +R+ AVA D      P  E P N+P RLL+ELA+RK+A SPKKK PPRRF
Sbjct: 17  PFSLHSSSRRVRVLAVAADQTPPPAPPSE-PANSPSRLLRELAQRKKAVSPKKKHPPRRF 76

Query: 76  ILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYP 135
           IL+PPLDD++L  RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYP
Sbjct: 77  ILKPPLDDERLTRRFLSSPQLSLKALPLLSSCLPSAPLSTADRTWMDEYLLEAKQALGYP 136

Query: 136 LDPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELAL 195
           L PS++   GDD PA+ FD L YLAFQH  PS ERT+ RH+R+GHSRL FLGQYV+ELA 
Sbjct: 137 LAPSETLGEGDDCPARHFDVLFYLAFQHLDPSSERTRMRHVRNGHSRLWFLGQYVLELAF 196

Query: 196 AEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPV 255
            E+FL RYPRESPGPMRERVFALIGK+ LP+W+KAASL NL+FPYDD+DKMIRKDREPP 
Sbjct: 197 CEFFLQRYPRESPGPMRERVFALIGKKVLPRWLKAASLHNLVFPYDDLDKMIRKDREPPS 256

Query: 256 KSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRI 315
           K+VFWA+FGAIYLCFGMPEVYRVLFE FGMDPD E C+P+LRRQLEDVDYVSVEFE +++
Sbjct: 257 KAVFWAIFGAIYLCFGMPEVYRVLFEAFGMDPDDESCQPKLRRQLEDVDYVSVEFEKRQL 316

Query: 316 SWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVVDKI 375
           +WQD+ +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+DSRP+VM  LGYPLP+ D+I
Sbjct: 317 TWQDVAAYRPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDSRPKVMTTLGYPLPMNDRI 376

Query: 376 PDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDA 435
           P+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEY+GQKIQD+VMAERLLMKHLDA
Sbjct: 377 PEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYVGQKIQDLVMAERLLMKHLDA 436

Query: 436 PGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALH 495
           PG+WL EKHRR LMNK+CGRYLR+K+L   IIY E VQD +E+NRRLRNP+TT+VQQALH
Sbjct: 437 PGRWLAEKHRRTLMNKYCGRYLRDKHLQHYIIYGETVQDRFEHNRRLRNPSTTSVQQALH 496

Query: 496 GLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           GL+Y VYGKPDVRRLMFEVFDFEQ+QPKAV
Sbjct: 497 GLAYCVYGKPDVRRLMFEVFDFEQVQPKAV 525

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BLAST of Pay0005786.1 vs. ExPASy Swiss-Prot
Match: Q5L0Q3 (Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-08
Identity = 38/124 (30.65%), Postives = 59/124 (47.58%), Query Frame = 0


Query: 146 DTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERV 205
           + LL  AF H S      R +   + RL FLG  V+EL +++Y   ++P  S G + +  
Sbjct: 32  EKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTKLR 91

Query: 206 FALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEV 265
            A++ + +L K+  A S   L+      +    + R   +  VF A  GA+YL  GM  V
Sbjct: 92  AAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAFIGALYLDQGMDAV 151

Query: 266 YRVL 270
            R L
Sbjct: 152 IRFL 155

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BLAST of Pay0005786.1 vs. ExPASy Swiss-Prot
Match: A4IM67 (Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=rnc PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-08
Identity = 39/126 (30.95%), Postives = 59/126 (46.83%), Query Frame = 0


Query: 144 QFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRE 203
           Q + LL  AF H S      R     + RL FLG  V+EL +++Y   ++P  S G + +
Sbjct: 30  QNEKLLIQAFTHSSYVNEHRRRFHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTK 89

Query: 204 RVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMP 263
              A++ + +L K+  A S   L+      +    + R   +  VF A  GA+YL  GM 
Sbjct: 90  LRAAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAFIGALYLDQGMD 149

Query: 264 EVYRVL 270
            V R L
Sbjct: 150 VVLRFL 155

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BLAST of Pay0005786.1 vs. ExPASy TrEMBL
Match: A0A1S3B1J9 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484834 PE=4 SV=1)

HSP 1 Score: 1052.7 bits (2721), Expect = 4.8e-304
Identity = 510/514 (99.22%), Postives = 511/514 (99.42%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 321 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
           VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. ExPASy TrEMBL
Match: A0A0A0KGG7 (RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 PE=4 SV=1)

HSP 1 Score: 1030.4 bits (2663), Expect = 2.6e-297
Identity = 494/514 (96.11%), Postives = 505/514 (98.25%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SS NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 20  SSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 79

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 80  KKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 139

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Sbjct: 140 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL 199

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDK+IRKDR
Sbjct: 200 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDR 259

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+ECEPRLRRQLEDVDYVSVEFE
Sbjct: 260 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFE 319

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 320 DKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 379

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 380 TDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 439

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 440 HLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 499

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 500 QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533

[Close]

BLAST of Pay0005786.1 vs. ExPASy TrEMBL
Match: A0A6J1BVK6 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005910 PE=4 SV=1)

HSP 1 Score: 1023.1 bits (2644), Expect = 4.1e-295
Identity = 492/514 (95.72%), Postives = 505/514 (98.25%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F  KI+PN+P FPN +SGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           K+VPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV+
Sbjct: 141 AKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVL 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKR+LPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 SDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. ExPASy TrEMBL
Match: A0A6J1GEC3 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453180 PE=4 SV=1)

HSP 1 Score: 1021.5 bits (2640), Expect = 1.2e-294
Identity = 490/514 (95.33%), Postives = 503/514 (97.86%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F+VKIHPN+P   N SSG LRIFAVAVDPQQELPKNNPQRLLKEL ERKRATSPK
Sbjct: 21  SSLTPFVVKIHPNNPSLSNPSSGGLRIFAVAVDPQQELPKNNPQRLLKELEERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAASLQNLIFPYDDMDKMVRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. ExPASy TrEMBL
Match: A0A6J1IRK8 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477828 PE=4 SV=1)

HSP 1 Score: 1015.4 bits (2624), Expect = 8.5e-293
Identity = 486/514 (94.55%), Postives = 503/514 (97.86%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F+VKIHPN+P   N SSG+LRIFAVAVDP+QELPKNNPQRLLKEL ERKRATSPK
Sbjct: 21  SSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPRQELPKNNPQRLLKELEERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWM+EYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMEEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+P DSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPFDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAASLQNLIFPYDDMDKMVRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           Q+LHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QSLHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. NCBI nr
Match: XP_008440359.1 (PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucumis melo])

HSP 1 Score: 1052.7 bits (2721), Expect = 1.0e-303
Identity = 510/514 (99.22%), Postives = 511/514 (99.42%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 321 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
           VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. NCBI nr
Match: XP_038883471.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispida])

HSP 1 Score: 1043.5 bits (2697), Expect = 6.0e-301
Identity = 504/514 (98.05%), Postives = 508/514 (98.83%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SS NLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPP+RFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPKRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRISWQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 321 DKRISWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. NCBI nr
Match: XP_004141878.1 (ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucumis sativus] >KGN48593.1 hypothetical protein Csa_003755 [Cucumis sativus])

HSP 1 Score: 1030.4 bits (2663), Expect = 5.3e-297
Identity = 494/514 (96.11%), Postives = 505/514 (98.25%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SS NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 20  SSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 79

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 80  KKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 139

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Sbjct: 140 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL 199

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDK+IRKDR
Sbjct: 200 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDR 259

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+ECEPRLRRQLEDVDYVSVEFE
Sbjct: 260 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFE 319

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 320 DKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 379

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 380 TDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 439

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 440 HLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 499

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 500 QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533

[Close]

BLAST of Pay0005786.1 vs. NCBI nr
Match: XP_022133289.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charantia])

HSP 1 Score: 1023.1 bits (2644), Expect = 8.5e-295
Identity = 492/514 (95.72%), Postives = 505/514 (98.25%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F  KI+PN+P FPN +SGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           K+VPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV+
Sbjct: 141 AKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVL 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKR+LPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 SDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. NCBI nr
Match: XP_023543359.1 (ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1021.9 bits (2641), Expect = 1.9e-294
Identity = 490/514 (95.33%), Postives = 504/514 (98.05%), Query Frame = 0


Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F+VKIHPN+P   N SSG+LRIFAVAVDPQQELPKNNPQRLLKEL ERKRATSPK
Sbjct: 21  SSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPQQELPKNNPQRLLKELEERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAASLQNLIFPYDDMDKMVRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Pay0005786.1 vs. TAIR 10
Match: AT4G37510.1 (Ribonuclease III family protein )

HSP 1 Score: 890.2 bits (2299), Expect = 8.0e-259
Identity = 425/515 (82.52%), Postives = 464/515 (90.10%), Query Frame = 0


Query: 1   MSSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSP 60
           +S SSS          I   S   NLRI A      Q LP+++PQRLLKELA+RK AT P
Sbjct: 23  ISFSSSISQFPSKTQSILTKSRFQNLRICASVTAETQGLPRDSPQRLLKELAQRKTATGP 82

Query: 61  KKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLL 120
           KKKVPP+RFILRPPLDDKKLAERFLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLL
Sbjct: 83  KKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLPSSKLNNADKTWIDEYLL 142

Query: 121 EAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV 180
           E KQALGY L+PS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL FLGQYV
Sbjct: 143 EVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARARHVKNGHSRLWFLGQYV 202

Query: 181 IELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKD 240
           +ELAL E+FL RYPRESPGPMRERVFALIGKR LPKWIKAASLQNLIFPYDDMDK+IRK+
Sbjct: 203 LELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASLQNLIFPYDDMDKLIRKE 262

Query: 241 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEF 300
           REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+EC+PR RRQLEDVDYVSVEF
Sbjct: 263 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQPRSRRQLEDVDYVSVEF 322

Query: 301 EDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLP 360
           E K++ WQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P+VMQ LGYPL 
Sbjct: 323 EGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDFDSKPKVMQTLGYPLT 382

Query: 361 VVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLM 420
           + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLM
Sbjct: 383 MNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLEYVGQKIQDIAMAERLLM 442

Query: 421 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAV 480
           KHLDAPGKWLQEKHRRLLMNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAV
Sbjct: 443 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAV 502

Query: 481 QQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 503 QQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537

[Close]

BLAST of Pay0005786.1 vs. TAIR 10
Match: AT2G48121.2 (LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )

HSP 1 Score: 141.0 bits (354), Expect = 2.7e-33
Identity = 66/77 (85.71%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 439 MNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVR 498
           MNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVR
Sbjct: 1   MNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVR 60

Query: 499 RLMFEVFDFEQIQPKAV 516
           RLMFEVFDFEQIQPKAV
Sbjct: 61  RLMFEVFDFEQIQPKAV 77

[Close]

BLAST of Pay0005786.1 vs. TAIR 10
Match: AT2G48121.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-22
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 459 SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           +E+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 19  TEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 75

The following BLAST results are available for this feature:

BLAST of Pay0005786.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZV0	1.1e-257	82.52	Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis th...	[more]
Q8S1Z0	3.4e-238	77.03	Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa s...	[more]
A6YSL1	4.4e-238	76.67	Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=45...	[more]
Q5L0Q3	1.3e-08	30.65	Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3...	[more]
A4IM67	1.7e-08	30.95	Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=r...	[more]

BLAST of Pay0005786.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B1J9	4.8e-304	99.22	ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo O...	[more]
A0A0A0KGG7	2.6e-297	96.11	RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 P...	[more]
A0A6J1BVK6	4.1e-295	95.72	ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica char...	[more]
A0A6J1GEC3	1.2e-294	95.33	ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita...	[more]
A0A6J1IRK8	8.5e-293	94.55	ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita...	[more]

BLAST of Pay0005786.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440359.1	1.0e-303	99.22	PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucum...	[more]
XP_038883471.1	6.0e-301	98.05	ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispid...	[more]
XP_004141878.1	5.3e-297	96.11	ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucum...	[more]
XP_022133289.1	8.5e-295	95.72	ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charan...	[more]
XP_023543359.1	1.9e-294	95.33	ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita p...	[more]

BLAST of Pay0005786.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37510.1	8.0e-259	82.52	Ribonuclease III family protein	[more]
AT2G48121.2	2.7e-33	85.71	LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonucle...	[more]
AT2G48121.1	1.7e-22	84.21	BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAI...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 147..284 e-value: 1.1E-25 score: 101.3
IPR000999	Ribonuclease III domain	PROSITE	PS50142	RNASE_3_2	coord: 148..261 score: 14.723119
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 147..278 e-value: 1.12709E-28 score: 108.469
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 380..505 e-value: 2.64205E-20 score: 84.9718
IPR036389	Ribonuclease III, endonuclease domain superfamily	GENE3D	1.10.1520.10	Ribonuclease III domain	coord: 372..508 e-value: 1.1E-11 score: 46.5 coord: 144..275 e-value: 2.4E-14 score: 55.1
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 380..506
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 113..274
None	No IPR available	PANTHER	PTHR11207:SF21	RIBONUCLEASE III DOMAIN-CONTAINING PROTEIN RNC1, CHLOROPLASTIC	coord: 4..512
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 4..512

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0005786	Pay0005786	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005786.1-exon	Pay0005786.1-exon-Contig00140_ERROPOS1134973:5575..5588	exon
Pay0005786.1-exon	Pay0005786.1-exon-Contig00140_ERROPOS1134973:5739..6461	exon
Pay0005786.1-exon	Pay0005786.1-exon-Contig00140_ERROPOS1134973:7716..7920	exon
Pay0005786.1-exon	Pay0005786.1-exon-Contig00140_ERROPOS1134973:8024..8224	exon
Pay0005786.1-exon	Pay0005786.1-exon-Contig00140_ERROPOS1134973:8811..8897	exon
Pay0005786.1-exon	Pay0005786.1-exon-Contig00140_ERROPOS1134973:9020..9337	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005786.1-cds	Pay0005786.1-cds-Contig00140_ERROPOS1134973:5575..5588	CDS
Pay0005786.1-cds	Pay0005786.1-cds-Contig00140_ERROPOS1134973:5739..6461	CDS
Pay0005786.1-cds	Pay0005786.1-cds-Contig00140_ERROPOS1134973:7716..7920	CDS
Pay0005786.1-cds	Pay0005786.1-cds-Contig00140_ERROPOS1134973:8024..8224	CDS
Pay0005786.1-cds	Pay0005786.1-cds-Contig00140_ERROPOS1134973:8811..8897	CDS
Pay0005786.1-cds	Pay0005786.1-cds-Contig00140_ERROPOS1134973:9020..9337	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0005786.1	Pay0005786.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003725	double-stranded RNA binding