Pay0005786 (gene) Melon (Payzawat) v1

Overview
NamePay0005786
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionribonuclease III domain-containing protein RNC1, chloroplastic
LocationContig00140_ERROPOS1134973: 5575 .. 9337 (+)
RNA-Seq ExpressionPay0005786
SyntenyPay0005786
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAGTTCCTCGTAACCCAAGTTCTTAATGTTCGGCCCCTCGCGTTTCGATTAAAACCACCCAGCATTATCTTCACTATTCACAACCAATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCTCCTTCTCCTAATTACTCTTTCTCATCTTATTTAACAGCTCGTTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACTCCTCGTCGGGTAATTTACGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAAATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCACGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGATCCATCCGATAGTTATGGAGATGACAATCCTGCAAAACAATTTGATACCTTGTTGTACTTGGCCTTTCAGCACCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTGTTTTTGGGTCAATATGTAATCGAATTGGCGCTGGCTGAGTATTTTCTTCTGAGGTATCCAAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGATATGGACAAAATGATTAGGAAGGACCGGGAACCACCAGTGAAGTAAGTTTGGTATTGTCTTTTAATTTTTTTTAGTTATTTTCTCCCGTTGTAAATAATTCTGTGAATAAGATAATTTTAAGAGATGTTTTTTGCTGGAAAGCCATGTCATTGATATGTTTAACCCCATTTTAAGTTTTAGAAGAATCACAGAATGTGGTATCATCATGATCTTACTGAAAAGTACCAAATGCTTTATGGAAGTTGATTGTGCAATATGATGGTTATGTAATGCATGGTTCACTAGGAACTCGGATTTCTGGGCCAGAAGAGACATTAAGAAGTTGGCTTTTGATTAAGGTAAACGTTGAAGGCATGCTCCTGGCATTCTAAAGTTAGGTAGCTTAGATATCACATTCGTGGACAATGAGCTTCGTCATATAGATGGTCCCCATTTTGTGAAGATGACACTACAAAAGCTCAGCTAAGAGACAGTGCTAAGGAAGTTGTTCCACTGGGAATGTGGCATAAAACCTTGATTTAGAGATTTTATATAGGTGGTTTGGTGCCATGGGGTAAATTCTTTGTGAACCCGAACTTTGGTGAACCTAGCACCAGACATTCTTTCCTCAAATCTAGTACCTGCAGACTATGTAGTCCACTTCATGAATCTGCTTCAATAATAATTTGTCCATCCTTCACAAACTTGCTTCCAGGCTGCTATGATTACTTTTACCAACATGGCTTTCCGTTTGCCTCTTTTTGGCAAATGTAGCTTTTATACCACTTGTCACATGTCAAATATGTGGTGAGACTTGCTATTGTATTGAGGGAATTGGGAGATTGGGTTTTCTTTACCCACTCTACTAATGTACTTCGTTTGTAGGTCCTATCTTTGTTTGCATGATTCATCAAATTCATGTTTTAGTATGATGCAAGATGTACTATAGGTTACGTAGTGAAACGTGTGTTGTTTCATAATTCATTTAACTTCTGTTTAGCCTATGGGGTACCTGATATAACTTTTTTTTTCATTTTCGTTTTCCTTTCATTTTGTGTTCTTTGTTAATTCTTGTTACCAATGCCCTGAAAGCAGCAAGGGTTGGGAAGAAAATGCTAGATATAAATTGTGAGTGTGGTTTTACATCATATCATGGTATTACTTTCTGTTGCATATCTGGTGACCTACTTGCACTTAATTGGTAAATTAGTAGCTTAGACTTAGGAATAAAACTCCTGCTCATTCTCTTTCTAAAATAGTTTGGTTCAGCATACTATTTCAACAATGTGAGCCTAAAATTAATTTTCTTCGAGCAGATCTGTATTTTGGGCGTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGAGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAGAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGATCTCCTATAAGGTAAGTTTCATGTTTTTTTTAACAGCACAGTAAACTATTGTTCTATTATTTATCCTTCTTAATAATGAATCCACTCTTGTAATTGTGATCTCTCATTTTTCAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTCCGAGCTTGTGTCCCACCCGGCATGCATCGATTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTGTTGATAAAATTCCTGACATCACAGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGGTATCGCCCACCCCACACAGACACACGACTTTTCTTCTCTCATTCATAACCACGTGAGATCGTATTATTATACATTCTCAATGTCAATTTTTATTGGCTTGTACGTTTGGATGTGTTTATCATCATGGCTGATCTTGAACTTTTTTATATCTTACGTGTGAAGGAGGATTTTTAAGGCTCCGATCGGTAACTATTTGATTTTTATTTTTAGTTTTGAAAATTAACTCTATTTTCTTCTAATTTCTTACGATAACTTGTATCTTTCTAAGTACAACTTCAATTCTAGCCATATTTCAATAACAAAAGTTTTTTCTTTAGTTATTTCAAATCTTTGTCTGGTGTTTTGAACCAACCGAAAGGCAGAATTTATCAGGTGAAAATGATTGTTTATAGTTTAATTTTAAAACCTAAAACCCAACAATTACCAAATGGGCCCACTGCATGTAATGTTGAATTCTGCTTGCTTGATATTGATCAGTGATTCGATATAATGGTTTTAACTTTTAAGTACCTTTTTAGGCTATATGTAAATTTTATGGAACGGCATGATCAAGCTAATCTCAGGCAATTTCTTAATCAAATGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGTAAGACTCTTTCTTAAATTTCTTAGGGAGGACGAACTACTTTATCTCTATCAAAATCCTATTCTTGATGTTTGGATCAAGAAACTAACTTATGGTGGTCGGTCCTATTGTGTTTGTTCAAGGATATCGTGATGGCCGAGAGACTGTTGATGAAACATTTAGATGCTCCTGGAAAGTGGTTGCAGGAGAAGCACCGGCGATTACTCATGAACAAATTTTGCGGACGGTATTTGAGGGAAAAATATCTTCATAAACTTATCATCTATTCTGAAAAAGTACAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTCTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

mRNA sequence

ATGTCCAGTTCCTCCTCGTTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACTCCTCGTCGGGTAATTTACGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAAATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCACGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGATCCATCCGATAGTTATGGAGATGACAATCCTGCAAAACAATTTGATACCTTGTTGTACTTGGCCTTTCAGCACCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTGTTTTTGGGTCAATATGTAATCGAATTGGCGCTGGCTGAGTATTTTCTTCTGAGGTATCCAAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGATATGGACAAAATGATTAGGAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCGTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGAGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAGAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGATCTCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTCCGAGCTTGTGTCCCACCCGGCATGCATCGATTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTGTTGATAAAATTCCTGACATCACAGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCGTGATGGCCGAGAGACTGTTGATGAAACATTTAGATGCTCCTGGAAAGTGGTTGCAGGAGAAGCACCGGCGATTACTCATGAACAAATTTTGCGGACGGTATTTGAGGGAAAAATATCTTCATAAACTTATCATCTATTCTGAAAAAGTACAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTCTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

Coding sequence (CDS)

ATGTCCAGTTCCTCCTCGTTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACTCCTCGTCGGGTAATTTACGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAAATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCACGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGATCCATCCGATAGTTATGGAGATGACAATCCTGCAAAACAATTTGATACCTTGTTGTACTTGGCCTTTCAGCACCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTGTTTTTGGGTCAATATGTAATCGAATTGGCGCTGGCTGAGTATTTTCTTCTGAGGTATCCAAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGATATGGACAAAATGATTAGGAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCGTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGAGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAGAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGATCTCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTCCGAGCTTGTGTCCCACCCGGCATGCATCGATTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTGTTGATAAAATTCCTGACATCACAGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCGTGATGGCCGAGAGACTGTTGATGAAACATTTAGATGCTCCTGGAAAGTGGTTGCAGGAGAAGCACCGGCGATTACTCATGAACAAATTTTGCGGACGGTATTTGAGGGAAAAATATCTTCATAAACTTATCATCTATTCTGAAAAAGTACAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTCTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

Protein sequence

MSSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Homology
[Close]
BLAST of Pay0005786 vs. ExPASy Swiss-Prot
Match: Q9SZV0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RNC1 PE=2 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 1.1e-257
Identity = 425/515 (82.52%), Postives = 464/515 (90.10%), Query Frame = 0 

Query: 1   MSSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSP 60
           +S SSS          I   S   NLRI A      Q LP+++PQRLLKELA+RK AT P
Sbjct: 23  ISFSSSISQFPSKTQSILTKSRFQNLRICASVTAETQGLPRDSPQRLLKELAQRKTATGP 82

Query: 61  KKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLL 120
           KKKVPP+RFILRPPLDDKKLAERFLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLL
Sbjct: 83  KKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLPSSKLNNADKTWIDEYLL 142

Query: 121 EAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV 180
           E KQALGY L+PS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL FLGQYV
Sbjct: 143 EVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARARHVKNGHSRLWFLGQYV 202

Query: 181 IELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKD 240
           +ELAL E+FL RYPRESPGPMRERVFALIGKR LPKWIKAASLQNLIFPYDDMDK+IRK+
Sbjct: 203 LELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASLQNLIFPYDDMDKLIRKE 262

Query: 241 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEF 300
           REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+EC+PR RRQLEDVDYVSVEF
Sbjct: 263 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQPRSRRQLEDVDYVSVEF 322

Query: 301 EDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLP 360
           E K++ WQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P+VMQ LGYPL 
Sbjct: 323 EGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDFDSKPKVMQTLGYPLT 382

Query: 361 VVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLM 420
           + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLM
Sbjct: 383 MNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLEYVGQKIQDIAMAERLLM 442

Query: 421 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAV 480
           KHLDAPGKWLQEKHRRLLMNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAV
Sbjct: 443 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAV 502

Query: 481 QQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 503 QQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537

[Close]
BLAST of Pay0005786 vs. ExPASy Swiss-Prot
Match: Q8S1Z0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RNC1 PE=2 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 3.4e-238
Identity = 389/505 (77.03%), Postives = 444/505 (87.92%), Query Frame = 0 

Query: 26  LRIFAVAVD---------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLD 85
           +R+ AVA D              P N+P RLL+ELAERK+A SPKKK PPRRFIL+PPLD
Sbjct: 29  VRVLAVAADHTPPPPPSPSSPPEPANSPSRLLRELAERKKAVSPKKKHPPRRFILKPPLD 88

Query: 86  DKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSY 145
           D++L +RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYPL PS++ 
Sbjct: 89  DERLTQRFLSSPQLSLKALPLLSSCLPSAPLSAADRTWMDEYLLEAKQALGYPLAPSETL 148

Query: 146 GDDN----PAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELALAEYFL 205
           GD +    PA+ FD LLYLAFQH   SCERT+ RH+RSGHSRL FLGQYV+ELA  E+FL
Sbjct: 149 GDGDDDGCPARHFDVLLYLAFQHLDTSCERTRTRHVRSGHSRLWFLGQYVLELAFCEFFL 208

Query: 206 LRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFW 265
            RYPRESPGPMRERVFALIGKR +PKWIKAASL NL+FPYDD+DKMIRKDREPP K+VFW
Sbjct: 209 QRYPRESPGPMRERVFALIGKRAIPKWIKAASLHNLVFPYDDLDKMIRKDREPPAKAVFW 268

Query: 266 ALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDM 325
           ALFGAIYLCFGMPEVYRVLFE FGMDP+ E C+P+LRRQLEDVDYVSVEFE ++++WQD+
Sbjct: 269 ALFGAIYLCFGMPEVYRVLFEAFGMDPEDESCQPKLRRQLEDVDYVSVEFEKRQLTWQDV 328

Query: 326 ISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVVDKIPDITE 385
            +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+D+RP+VM  LGYPLP+ D+IP+ITE
Sbjct: 329 AAYRPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDNRPKVMNTLGYPLPMNDRIPEITE 388

Query: 386 ARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWL 445
           ARNIELGLGLQLCFLHPSKHKFEHPRFC ERLEY+GQKIQD+VMAERLLMKHLDAPG+WL
Sbjct: 389 ARNIELGLGLQLCFLHPSKHKFEHPRFCLERLEYVGQKIQDLVMAERLLMKHLDAPGRWL 448

Query: 446 QEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYV 505
            EKHRRLLMNK+CGRYLR+K+LH  IIY E VQD +E+NRRLRNP+TTAVQQA+HGL+Y 
Sbjct: 449 AEKHRRLLMNKYCGRYLRDKHLHHYIIYGESVQDRFEHNRRLRNPSTTAVQQAIHGLAYC 508

Query: 506 VYGKPDVRRLMFEVFDFEQIQPKAV 516
           VYGKPDVRRLMFEVFDFEQ+QPKAV
Sbjct: 509 VYGKPDVRRLMFEVFDFEQVQPKAV 533

[Close]
BLAST of Pay0005786 vs. ExPASy Swiss-Prot
Match: A6YSL1 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=4577 GN=RNC1 PE=1 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 4.4e-238
Identity = 391/510 (76.67%), Postives = 448/510 (87.84%), Query Frame = 0 

Query: 16  PIFPNSSSGNLRIFAVAVD------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRF 75
           P   +SSS  +R+ AVA D      P  E P N+P RLL+ELA+RK+A SPKKK PPRRF
Sbjct: 17  PFSLHSSSRRVRVLAVAADQTPPPAPPSE-PANSPSRLLRELAQRKKAVSPKKKHPPRRF 76

Query: 76  ILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYP 135
           IL+PPLDD++L  RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYP
Sbjct: 77  ILKPPLDDERLTRRFLSSPQLSLKALPLLSSCLPSAPLSTADRTWMDEYLLEAKQALGYP 136

Query: 136 LDPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELAL 195
           L PS++   GDD PA+ FD L YLAFQH  PS ERT+ RH+R+GHSRL FLGQYV+ELA 
Sbjct: 137 LAPSETLGEGDDCPARHFDVLFYLAFQHLDPSSERTRMRHVRNGHSRLWFLGQYVLELAF 196

Query: 196 AEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPV 255
            E+FL RYPRESPGPMRERVFALIGK+ LP+W+KAASL NL+FPYDD+DKMIRKDREPP 
Sbjct: 197 CEFFLQRYPRESPGPMRERVFALIGKKVLPRWLKAASLHNLVFPYDDLDKMIRKDREPPS 256

Query: 256 KSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRI 315
           K+VFWA+FGAIYLCFGMPEVYRVLFE FGMDPD E C+P+LRRQLEDVDYVSVEFE +++
Sbjct: 257 KAVFWAIFGAIYLCFGMPEVYRVLFEAFGMDPDDESCQPKLRRQLEDVDYVSVEFEKRQL 316

Query: 316 SWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVVDKI 375
           +WQD+ +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+DSRP+VM  LGYPLP+ D+I
Sbjct: 317 TWQDVAAYRPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDSRPKVMTTLGYPLPMNDRI 376

Query: 376 PDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDA 435
           P+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEY+GQKIQD+VMAERLLMKHLDA
Sbjct: 377 PEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYVGQKIQDLVMAERLLMKHLDA 436

Query: 436 PGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALH 495
           PG+WL EKHRR LMNK+CGRYLR+K+L   IIY E VQD +E+NRRLRNP+TT+VQQALH
Sbjct: 437 PGRWLAEKHRRTLMNKYCGRYLRDKHLQHYIIYGETVQDRFEHNRRLRNPSTTSVQQALH 496

Query: 496 GLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           GL+Y VYGKPDVRRLMFEVFDFEQ+QPKAV
Sbjct: 497 GLAYCVYGKPDVRRLMFEVFDFEQVQPKAV 525

[Close]
BLAST of Pay0005786 vs. ExPASy Swiss-Prot
Match: Q5L0Q3 (Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-08
Identity = 38/124 (30.65%), Postives = 59/124 (47.58%), Query Frame = 0 

Query: 146 DTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERV 205
           + LL  AF H S      R +   + RL FLG  V+EL +++Y   ++P  S G + +  
Sbjct: 32  EKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTKLR 91

Query: 206 FALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEV 265
            A++ + +L K+  A S   L+      +    + R   +  VF A  GA+YL  GM  V
Sbjct: 92  AAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAFIGALYLDQGMDAV 151

Query: 266 YRVL 270
            R L
Sbjct: 152 IRFL 155

[Close]
BLAST of Pay0005786 vs. ExPASy Swiss-Prot
Match: A4IM67 (Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=rnc PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-08
Identity = 39/126 (30.95%), Postives = 59/126 (46.83%), Query Frame = 0 

Query: 144 QFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRE 203
           Q + LL  AF H S      R     + RL FLG  V+EL +++Y   ++P  S G + +
Sbjct: 30  QNEKLLIQAFTHSSYVNEHRRRFHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTK 89

Query: 204 RVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMP 263
              A++ + +L K+  A S   L+      +    + R   +  VF A  GA+YL  GM 
Sbjct: 90  LRAAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAFIGALYLDQGMD 149

Query: 264 EVYRVL 270
            V R L
Sbjct: 150 VVLRFL 155

[Close]
BLAST of Pay0005786 vs. ExPASy TrEMBL
Match: A0A1S3B1J9 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484834 PE=4 SV=1)

HSP 1 Score: 1052.7 bits (2721), Expect = 4.8e-304
Identity = 510/514 (99.22%), Postives = 511/514 (99.42%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 321 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
           VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. ExPASy TrEMBL
Match: A0A0A0KGG7 (RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 PE=4 SV=1)

HSP 1 Score: 1030.4 bits (2663), Expect = 2.6e-297
Identity = 494/514 (96.11%), Postives = 505/514 (98.25%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SS NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 20  SSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 79

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 80  KKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 139

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Sbjct: 140 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL 199

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDK+IRKDR
Sbjct: 200 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDR 259

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+ECEPRLRRQLEDVDYVSVEFE
Sbjct: 260 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFE 319

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 320 DKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 379

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 380 TDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 439

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 440 HLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 499

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 500 QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533

[Close]
BLAST of Pay0005786 vs. ExPASy TrEMBL
Match: A0A6J1BVK6 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005910 PE=4 SV=1)

HSP 1 Score: 1023.1 bits (2644), Expect = 4.1e-295
Identity = 492/514 (95.72%), Postives = 505/514 (98.25%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F  KI+PN+P FPN +SGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           K+VPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV+
Sbjct: 141 AKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVL 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKR+LPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 SDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. ExPASy TrEMBL
Match: A0A6J1GEC3 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453180 PE=4 SV=1)

HSP 1 Score: 1021.5 bits (2640), Expect = 1.2e-294
Identity = 490/514 (95.33%), Postives = 503/514 (97.86%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F+VKIHPN+P   N SSG LRIFAVAVDPQQELPKNNPQRLLKEL ERKRATSPK
Sbjct: 21  SSLTPFVVKIHPNNPSLSNPSSGGLRIFAVAVDPQQELPKNNPQRLLKELEERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAASLQNLIFPYDDMDKMVRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. ExPASy TrEMBL
Match: A0A6J1IRK8 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477828 PE=4 SV=1)

HSP 1 Score: 1015.4 bits (2624), Expect = 8.5e-293
Identity = 486/514 (94.55%), Postives = 503/514 (97.86%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F+VKIHPN+P   N SSG+LRIFAVAVDP+QELPKNNPQRLLKEL ERKRATSPK
Sbjct: 21  SSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPRQELPKNNPQRLLKELEERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWM+EYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMEEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+P DSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPFDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAASLQNLIFPYDDMDKMVRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           Q+LHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QSLHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. NCBI nr
Match: XP_008440359.1 (PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucumis melo])

HSP 1 Score: 1052.7 bits (2721), Expect = 1.0e-303
Identity = 510/514 (99.22%), Postives = 511/514 (99.42%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 321 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
           VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. NCBI nr
Match: XP_038883471.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispida])

HSP 1 Score: 1043.5 bits (2697), Expect = 6.0e-301
Identity = 504/514 (98.05%), Postives = 508/514 (98.83%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SS NLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPP+RFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPKRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRISWQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 321 DKRISWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. NCBI nr
Match: XP_004141878.1 (ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucumis sativus] >KGN48593.1 hypothetical protein Csa_003755 [Cucumis sativus])

HSP 1 Score: 1030.4 bits (2663), Expect = 5.3e-297
Identity = 494/514 (96.11%), Postives = 505/514 (98.25%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + FIVKIHPNHPIFPN SS NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 20  SSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 79

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 80  KKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 139

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Sbjct: 140 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL 199

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDK+IRKDR
Sbjct: 200 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDR 259

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+ECEPRLRRQLEDVDYVSVEFE
Sbjct: 260 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFE 319

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV
Sbjct: 320 DKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 379

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 380 TDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 439

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 440 HLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 499

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 500 QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533

[Close]
BLAST of Pay0005786 vs. NCBI nr
Match: XP_022133289.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charantia])

HSP 1 Score: 1023.1 bits (2644), Expect = 8.5e-295
Identity = 492/514 (95.72%), Postives = 505/514 (98.25%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F  KI+PN+P FPN +SGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK
Sbjct: 21  SSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           K+VPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV+
Sbjct: 141 AKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVL 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKR+LPKWIKAASLQNLIFPYDDMDKMIRKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAASLQNLIFPYDDMDKMIRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 SDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. NCBI nr
Match: XP_023543359.1 (ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1021.9 bits (2641), Expect = 1.9e-294
Identity = 490/514 (95.33%), Postives = 504/514 (98.05%), Query Frame = 0 

Query: 2   SSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPK 61
           SS + F+VKIHPN+P   N SSG+LRIFAVAVDPQQELPKNNPQRLLKEL ERKRATSPK
Sbjct: 21  SSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPQQELPKNNPQRLLKELEERKRATSPK 80

Query: 62  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 121
           KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE
Sbjct: 81  KKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLE 140

Query: 122 AKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 181
           AKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Sbjct: 141 AKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI 200

Query: 182 ELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKDR 241
           ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDR
Sbjct: 201 ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAASLQNLIFPYDDMDKMVRKDR 260

Query: 242 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 301
           EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE
Sbjct: 261 EPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFE 320

Query: 302 DKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV 361
           DK+ISWQDM++YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV
Sbjct: 321 DKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPVPV 380

Query: 362 VDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 421
            DKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
Sbjct: 381 TDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK 440

Query: 422 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ 481
           HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Sbjct: 441 HLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQVQDAYENNRRLRNPATTAVQ 500

Query: 482 QALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 501 QALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]
BLAST of Pay0005786 vs. TAIR 10
Match: AT4G37510.1 (Ribonuclease III family protein )

HSP 1 Score: 890.2 bits (2299), Expect = 8.0e-259
Identity = 425/515 (82.52%), Postives = 464/515 (90.10%), Query Frame = 0 

Query: 1   MSSSSSFIVKIHPNHPIFPNSSSGNLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSP 60
           +S SSS          I   S   NLRI A      Q LP+++PQRLLKELA+RK AT P
Sbjct: 23  ISFSSSISQFPSKTQSILTKSRFQNLRICASVTAETQGLPRDSPQRLLKELAQRKTATGP 82

Query: 61  KKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLL 120
           KKKVPP+RFILRPPLDDKKLAERFLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLL
Sbjct: 83  KKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLPSSKLNNADKTWIDEYLL 142

Query: 121 EAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV 180
           E KQALGY L+PS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL FLGQYV
Sbjct: 143 EVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARARHVKNGHSRLWFLGQYV 202

Query: 181 IELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKMIRKD 240
           +ELAL E+FL RYPRESPGPMRERVFALIGKR LPKWIKAASLQNLIFPYDDMDK+IRK+
Sbjct: 203 LELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASLQNLIFPYDDMDKLIRKE 262

Query: 241 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEF 300
           REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+EC+PR RRQLEDVDYVSVEF
Sbjct: 263 REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQPRSRRQLEDVDYVSVEF 322

Query: 301 EDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLP 360
           E K++ WQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P+VMQ LGYPL 
Sbjct: 323 EGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDFDSKPKVMQTLGYPLT 382

Query: 361 VVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLM 420
           + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLM
Sbjct: 383 MNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLEYVGQKIQDIAMAERLLM 442

Query: 421 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAV 480
           KHLDAPGKWLQEKHRRLLMNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAV
Sbjct: 443 KHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAV 502

Query: 481 QQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           QQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 503 QQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537

[Close]
BLAST of Pay0005786 vs. TAIR 10
Match: AT2G48121.2 (LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )

HSP 1 Score: 141.0 bits (354), Expect = 2.7e-33
Identity = 66/77 (85.71%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 439 MNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVR 498
           MNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVR
Sbjct: 1   MNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVR 60

Query: 499 RLMFEVFDFEQIQPKAV 516
           RLMFEVFDFEQIQPKAV
Sbjct: 61  RLMFEVFDFEQIQPKAV 77

[Close]
BLAST of Pay0005786 vs. TAIR 10
Match: AT2G48121.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-22
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 0 

Query: 459 SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 516
           +E+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Sbjct: 19  TEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 75

The following BLAST results are available for this feature:
BLAST of Pay0005786 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZV01.1e-25782.52Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis th... [more]
Q8S1Z03.4e-23877.03Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa s... [more]
A6YSL14.4e-23876.67Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=45... [more]
Q5L0Q31.3e-0830.65Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3... [more]
A4IM671.7e-0830.95Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=r... [more]
BLAST of Pay0005786 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B1J94.8e-30499.22ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo O... [more]
A0A0A0KGG72.6e-29796.11RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 P... [more]
A0A6J1BVK64.1e-29595.72ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica char... [more]
A0A6J1GEC31.2e-29495.33ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita... [more]
A0A6J1IRK88.5e-29394.55ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita... [more]
BLAST of Pay0005786 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440359.11.0e-30399.22PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucum... [more]
XP_038883471.16.0e-30198.05ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispid... [more]
XP_004141878.15.3e-29796.11ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucum... [more]
XP_022133289.18.5e-29595.72ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charan... [more]
XP_023543359.11.9e-29495.33ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita p... [more]
BLAST of Pay0005786 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37510.18.0e-25982.52Ribonuclease III family protein [more]
AT2G48121.22.7e-3385.71LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonucle... [more]
AT2G48121.11.7e-2284.21BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAI... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 147..284
e-value: 1.1E-25
score: 101.3
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 148..261
score: 14.723119
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 147..278
e-value: 1.12709E-28
score: 108.469
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 380..505
e-value: 2.64205E-20
score: 84.9718
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10Ribonuclease III domaincoord: 372..508
e-value: 1.1E-11
score: 46.5
coord: 144..275
e-value: 2.4E-14
score: 55.1
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 380..506
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 113..274
NoneNo IPR availablePANTHERPTHR11207:SF21RIBONUCLEASE III DOMAIN-CONTAINING PROTEIN RNC1, CHLOROPLASTICcoord: 4..512
IPR011907Ribonuclease IIIPANTHERPTHR11207RIBONUCLEASE IIIcoord: 4..512

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0005786.1Pay0005786.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006396 RNA processing
biological_process GO:0016075 rRNA catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding