PI0027558.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAGCGCCAATGTGACAGAGGACTACGACGAGGGTGATTCGACGTATGCAACAACTGCATGTGACGACATCCACTACATGAAAACCTCCAATGAATGGAGTCAATGGAGGGATGATCTAGCTAAAGAACTATTCAGTGAATGGGAGTTACGTAATCAGTAG ATGACGAGCGCCAATGTGACAGAGGACTACGACGAGGGTGATTCGACGTATGCAACAACTGCATGTGACGACATCCACTACATGAAAACCTCCAATGAATGGAGTCAATGGAGGGATGATCTAGCTAAAGAACTATTCAGTGAATGGGAGTTACGTAATCAGTAG ATGACGAGCGCCAATGTGACAGAGGACTACGACGAGGGTGATTCGACGTATGCAACAACTGCATGTGACGACATCCACTACATGAAAACCTCCAATGAATGGAGTCAATGGAGGGATGATCTAGCTAAAGAACTATTCAGTGAATGGGAGTTACGTAATCAGTAG MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ Homology
BLAST of PI0027558.1 vs. ExPASy TrEMBL
Match: A0A5D3D9Z3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold519G00220 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.3e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. ExPASy TrEMBL
Match: A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.3e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. ExPASy TrEMBL
Match: A0A5A7UGH9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00700 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.3e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. ExPASy TrEMBL
Match: A0A5A7VHB0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00240 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.3e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. ExPASy TrEMBL
Match: A0A5A7VG29 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3818G00010 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.3e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. NCBI nr
Match: KAA0065286.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 6.9e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. NCBI nr
Match: KAA0048281.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 6.9e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. NCBI nr
Match: KAA0068124.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 6.9e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. NCBI nr
Match: KAA0054148.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 6.9e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0027558.1 vs. NCBI nr
Match: KAA0054554.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK20397.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 6.9e-14 Identity = 38/54 (70.37%), Postives = 49/54 (90.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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