PI0024429.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGCCGTAAAGGAGGAATCCCTACCGTGGGGGACAACCGTGAGCAAGAAGAGGTGGAGGAGATCGCCACCCTCTCTCCAAGGACATCCACGGTACGCTTGCTGGCCGTCGAAGACTCCTTGGGAGATTTACACAAAAAGTTTGATAGAGTAATGGATACTTTGGAGACACTGACTCGAAGGATGGACGGACTACCGACTCCGGCAAGAATTGAAGCCAACGTAAATAATGATCGGAACGACGGAAACAGAGGAGGCCGACGAGCTCAAAGAAATTTTAGAACTTTGCCCAATCAAAGGAATGATCAAAGAAGGAGGCCAATGGAGAATCCGCTGCGATATGCCGATGATGATTCAATGGAAGAATATGAAGCTTGGCAAAATGGGCAAGAATGTGATTCTTCCAGCGGTGATGAGCAAGAAAATATTTGGAATGATAATGGAGATATTCGAATGAGACGAGTTTATAGAGGACATGAAGCACGAAGGGAAGTTCATCATGATTATAAGATGAAAATTGATCTTCCAACCTATGATGGTAAGCGTGATATTGAATCTTTTTTGGATTGGATTAAAAATACTGAAAATTTCTTCAATTATATGGATACTCCCAATAGAAAGAAAGTGCACTTGGTGGCCCTAAAGCTACGTGGAGGAGCTTCGGCATGGTGGGATCAGCTTGAAATAAACAAACAAAGATACGGCAAGCCACCTGTTCACTCATGGGAGAAGATGAAAAAACTGCTAAAGCACGTTTTTTACCTCCAAACTATGAACAAACGCTATATAATCAGTATCAAAACTGTCGCCAAGGAAGCAGATCAGTAATAGAATACATTGAAGAATTTTACAGACTAAGTGCTAGAACCAATCTGAGTGAGAATGAACAACATCAGATTGCACGGTTCATTGGTGGCCTAAGATTTGATATAAAGGAAAAGGTGAAATTACAGCCATTCCATTTTTTATCTGAAGCTATTTCTCTTGCAGAAACTGTAGAAGAAATGATGGCTGCAAGATCTAAGAATACTAACAGAAAGAACATATGGGAAACGAATTTTTCAAAGAAGCAAACTTACAGTAATAAAGCAAATGAGCAACCTTCAACATCTATTGCAGAAAAAAGCAAAGATGTTGTAGCACAGAAGGCAGCCAAGAAGAAAGAAATTGTGGGCAAAGGAAAGGTTCAGAATAATTACAATTGGCCATCATTAGGCAAGTGTTTTAAGTGTGGCCAAACTGGTCAAGAGTATGATTCAGCAAGTGATGATAGCAAAACAGTGGAAGAAGAAACCGAGTTAATTGAAGCTGATGATGGTGACAGGATATCCTGCGTTATTCAAAGAGTCCTAATTACCCTAAAGAAGAAACCAATCCTCAACGCCACTGTTTGTTCAAAACCAGATGCACGATCAATGGGAAGGTGTGTGACGTGATTATTAACAGCGGAAGCAGTGAGAATTTCATAGCAAAGAGCTTGTAACCGCTCTAAATCTAAAGGCAGAAACACATCCTAATCCTTACAAGATTGGTTGGGTAAAGAAGGACGGAGAAACTTTAGTAAGTGAGATTTGCATCGTACCACTTTCCATTGGAAGTGGATACAAAGATCAAAATGTTTGCGATGTAATAGACATGGACGTATGTCATTTGCTCCTAGGAAGACCATGGCAACACGACACTCAAACCTTGCATAAGGGGAGAGAAAATATCTATGAGTTCTATTGGATGGGGAAGAAGATTGTTCTACTTCCCCTATCAAAAAATAATGAAGGAGCAAAGCATATGAAGACTAAGGGGCAACTATTTACCACTGTCAGTGGAAAGAAATTGATCAGTGAAAGAGAAAGAGACATCCTAGGGCTGGTTGTTGTTGATAAGTTCATAGGAGGAGAACTGGGAATTATGGAACCTGAGTTACAACAATTACTTGCTGAATTTCCTCACTTGAGAAAAGAACCACATGGCTTACCACCTTTACGAGATATTCAGCACCAAATAGACTTGATTCCAGGAGCATCTTTGCCGAATTTGGCCCACTATCAATGAGTGCTCATAAATATCAGATTCTTCGTGAACATATTGAGGAACTATTGAAGAAAGGACACATTAAGCCAAGTCTAAGCCCCTGTGCAGTACCAGCTCTACTCACACCTAAGAAAGATGGAAGTTGGAGGGTGTGTGTAGACAGCAGAGCAATTAATCGAATAACTATAAAATACAGATTCCCTATTCCTCGAATTGGTGATCTTTTAGACCAGTTGGGTAAGGCTAATATCTTTTCAAAGATTGATCTAAAAAGTGGCTACCATCAGATACGAATTAGACCGGGAGATGAATGGAAAACAGCATTTAAAACTAATGAGGGCTTGTTTGAATGGATGGTTATGCCATTTGGACTATCCAACGCACCCAGCACCTTCATGAGATTGATGAATCAGGTGCTCCAACCTTTCCTCAATAAATTTATAGTAGTTTACTTTGATGATATACTTGTTTACAGCAGTAGAAAGGATGAACACATGTTGCATCTCAGAAAATATTTCAAGTGCTGACTGAAACAGAATTATATATCAATCAGAAAAATGCATCTTCCTAAAGGAAGAAATTTCTTTCCTTGGGTTCATCATCAAAGAAGGGGAGATCAGAATGGAGCCTAAGAAAATTGAAGCAATAAGAACTTGGCCAATCCCAGCTTCTATCAAAGAAATCCAAGCCTTTCTTGGATTAGCTTCTTTTTACAGGAAGTTCATAAAGAATTTCAGTTCTATTGTTGCTCCACTAACCGATTGTTTAAAGAAAGGAAATTTAAGTGGACTTCACAGCAACAAGAAAGCTTTGAAAACATCAAGAAGAAACTTACTTCCAGCCCCATTTTACAACTTCCAGACTTCACTTCACCCTTTGAAGTTGCAGTCGACGCTTGTGGAATGGGAATAGAGCTGTTCTATCTCAAAAAGGACACCCGGTTGAATATTTTAGTGAAAAACTCAGCATATCTAGACAAGCATGGAGCACATATGAGCAGGAATTGTATGCCTTGATCCGAGCACTAAAACAGTGGGAACATTACCTACTGTCTAGAGAATTTGTCCTCTTAACCGATCACTTTTCACTAAAATATCTTCACTCCCAAAAAAACATCAGCAGGATGCACGCTCGATGGATCTCCTTCCTACAGAGATTTGATTTTGTTATCAAATATCAGGCCGGAAAAGAAAACAAGGTGGCTGACGCTCTTAGTAGAAAGAATTCCCTCCTTACATTGCTATCTTCAGAAATCACAGCCTTTAAACATCTCCCTGATCTTTATGAAGAAGACATTGACTTTGCAGAAACTTGGTATAAATGCAACAATTATCTAAAGGCTGATGATTATCATATTGTAGAGGGATTTCTCTTTAAAGGTGAACAACTGTGCATGCCGCACACCTCCCTACGAGAAGCATTACTTAAAGAAGCTCATTCAGGAGGCTTATCCAGCCACTTTGGCCAAGATAAAACGTATGATTTAGTATCCAAAAGATACTATTGGCCACAATTAAGAAGGGATTCCAATAATTTTGTCAAGAGATGCTCCATTTGTCAAAAGCAAAGGGATCAAGCACTAATGCCGGCCTATACTGCCCGTTACCTATCCCAAAATCCATATGGGAAGATCTTTTAATTGATTTCGTGCTTGGCCTCCCTAAGACTCAAAGAAACTATGAATCTGTGATGGTTGTAGTAGATCGGTTCAGTAAAATGACCCATTTTGTTGCTTGTAAGAAAACAAACGATGCTATATATATTGCTAATCTCTTCTTTAGAGAGATAGTGCGATTACATGGGATTCCTAAGACAATCGTCTCTGACAGAGATGTAAAATTCCTAAGTCATTTCTGGAGAACCTTATGGAAAAAGCTTGATACTACTCTCAAATATAGCACCATAGCTCATCCTCAAACAGATGACCAAACAGAGGTGACTAACAGAACATTAGGGAATCTCATAAGATGCCTTAGTGGATCTAAGCCTAAGCAATGGGATCTATCACTAGCACAAGCAGAGTTCGCATTTAACAACATGAGAAACCGGTCAACAAACAAATGCCCCTTTGAAATAGTCTATACTAAACAGCCAAGGTTGACCTTTGACCTTGCTTCCCTCCCTACAACAGTTGACATTAACCAAGAAGCTGAAAGCATGGTAGAAAAACTTGAACAACTACACAAGGAAGTCACCGATCACCTCATGAAAACTACAAATTCCTACAAGAAGACAGCTGATATGAAAAGAAGGCAAGCTAAATTTGCTAAGGGAGACCTAGTAATGGTGCACCTAAAAAAGAGTAGATTCCCATCCGGCACTTATAACAAATTGAAAGATAGACAAATCGGCCCAGTACGAATCCTAGAAAAATATGGAGAAAACGCTTTCAAAGTCGAACTACCACCAGATATGAATATACACCCAGTATTCAACGTTGCCGATTTGAAGCCTTACTACGCACCGGACGAGTTCAAGCTTGCACACTGATGGACTTCGGGACAAGTCCATCCTAAGGGGGGTAGAATGATGTAAATAATAGTATAGCAGAAACTGTATAACTGTTAAACAGAAACTGTTGCCATTAAACAGAAACTGTTAGGAAAATCTGTTAAAGAAGCTAACTGATTAGTTACCCGACTGCCTAACCAACTTGTAACTACCCAATAACTACTTAAAACTCATCAATAAATACATGATATCTCAGCAAAAAGGGAGAGAATTCATTTGATAAAAATTCACAATTTGGAATCACACCAAAATATGAGCAAAAATTTTGGTTAACAGTAGAATAGGTTTATTGGGAAAAGGTGAATAAATACCGATGATATGGACATTTCTGCTTCAAGAATATATTCTCAAACAACAAGATACATTCTAATAATAATAATAGAAAAAATACACTTACTTGAAGGGACAAATGTAAGTTTTCTCTCCCTTTCTCACTTTTCTCTCTCCTCTTTTCTCTCTCCTCCTCCTCCCTCCCTTCAACATCATCGCCAGCCTATTACCCTCTCCAGTAGACACTACTCTACGTCAACTTGTACTTTGGAAATACCCTAGCAACCATTCTTACTTCACAAAGATGGAAGTAAAAAGCTGCAAAATCAACAACCTTTTTTTCTGCATTTGGCATGAAGATGAAGCTTTTCACATAGAAGATGTTGAAGCTAATATTATTATGTCAATATCAATCTTTCAACTTAGGTGGTTCATTGAAATGGTGAAAGAATTGAATAAGAATTCTCAAGAAGATTACTTCTATAAGAAAGAAAAGTTGAGAGTGGAAGGGTCGAAACTTCCAAATTCAGAACCAAAAGTGGGTGGGTTCTAAGATGCAATGCATGGCCTCGTAGAGGAGGGAAATCATTTATTCATATCCCCATCGGTGAAGATAAACACGGGTGGAAAAGTTTCGGAAAAATGTTGGGAGACTTCAAGGACAACCATGAATACAAATCTGGTTCTCTACCCAAATCATGTCCAACTCCATTAGGAAGCAGCCGAACAAAAGTATGAAAGGAAGCTATGCGGAGATAGCAAAATCAAAAGAGACATCCAAGAACTCTGTCTTCGATACCACAAAACAGAGTACAAGCAAATATTGGGTGATTAAGAATCCGGTAGTCTTAAGCTCAATGCTTGTGTAATGGAAAACTTCATCTGTTTAATCAAAAAAAAGAGGATGCTTCCAAGGTGAGAAACTTCAGGCCAATAAGTCTCACTACTTTGACTTACAAGCTGGTGGCAAAAGTATTGGCAAAAAGACTTAAAGAAGATTATGCCAAGCATTATTGATTCTCCTCAAAGCGCCTTTTTAGAAGAAGGCAAATTCTCGACCCCATTCTCATGCCAACGAAGTGCTGGAAGATTACAGAGCGAAAAAGAAGAAAGGGTGGCTGATTAAGCTGGACCTTGAAAAGCCTTTGATAAGGCCGATTGGGACTTTTTAGAAAAAGTAATGGTACAAAAAAAATTGATGGCAGATGAATAAAGTGGATAATGGGTTGTGTGCAAAATCCCAATTACTCAATCTTTATAAATGGCCGACCACGAGGCAGAATTCAAGCATCAAGAGGCCTCCGACAAGGAGACCCACTTTCCCATTTCTCTTCCTCCTAGAAAGTGAAGTTCTAAGAAGCCTAATCTCATTGATACATGCGAAGGGAATGTTTGATGGCTTTATTGTAGGCAAAGACAAGGTACATGTTTCCTTACTCCAGTTTGCTGATGATACACTAATATTCTGCAAAAATGATGAGGCAATGAT ATGGCTGGCCGTAAAGGAGGAATCCCTACCGTGGGGGACAACCGTGAGCAAGAAGAGGTGGAGGAGATCGCCACCCTCTCTCCAAGGACATCCACGGTACGCTTGCTGGCCGTCGAAGACTCCTTGGGAGATTTACACAAAAAGTTTGATAGAGTAATGGATACTTTGGAGACACTGACTCGAAGGATGGACGGACTACCGACTCCGGCAAGAATTGAAGCCAACGTAAATAATGATCGGAACGACGGAAACAGAGGAGGCCGACGAGCTCAAAGAAATTTTAGAACTTTGCCCAATCAAAGGAATGATCAAAGAAGGAGGCCAATGGAGAATCCGCTGCGATATGCCGATGATGATTCAATGGAAGAATATGAAGCTTGGCAAAATGGGCAAGAATGTGATTCTTCCAGCGGTGATGAGCAAGAAAATATTTGGAATGATAATGGAGATATTCGAATGAGACGAGTTTATAGAGGACATGAAGCACGAAGGGAAGTTCATCATGATTATAAGATGAAAATTGATCTTCCAACCTATGATGGTAAGCGTGATATTGAATCTTTTTTGGATTGGATTAAAAATACTGAAAATTTCTTCAATTATATGGATACTCCCAATAGAAAGAAAGTGCACTTGGTGGCCCTAAAGCTACGTGGAGGAGCTTCGGCATGGTGGGATCAGCTTGAAATAAACAAACAAAGATACGGCAAGCCACCTGTTCACTCATGGGAGAAGATGAAAAAACTGCTAAAGCACGTTTTTTACCTCCAAACTATGAACAAACGCTATATAATCAGTATCAAAACTGTCGCCAAGGAAGCAGATCACAAAGAGCTTGTAACCGCTCTAAATCTAAAGGCAGAAACACATCCTAATCCTTACAAGATTGGTTGGGTAAAGAAGGACGGAGAAACTTTAGTAAGTGAGATTTGCATCGTGACTAACAGAACATTAGGGAATCTCATAAGATGCCTTAGTGGATCTAAGCCTAAGCAATGGGATCTATCACTAGCACAAGCAGAGTTCGCATTTAACAACATGAGAAACCGGTCAACAAACAAATGCCCCTTTGAAATAGCCGATTGGGACTTTTTAGAAAAAGTAATGGTACAAAAAAAATTGATGGCAGATGAATAAAGTGGATAATGGGTTGTGTGCAAAATCCCAATTACTCAATCTTTATAAATGGCCGACCACGAGGCAGAATTCAAGCATCAAGAGGCCTCCGACAAGGAGACCCACTTTCCCATTTCTCTTCCTCCTAGAAAGTGAAGTTCTAAGAAGCCTAATCTCATTGATACATGCGAAGGGAATGTTTGATGGCTTTATTGTAGGCAAAGACAAGGTACATGTTTCCTTACTCCAGTTTGCTGATGATACACTAATATTCTGCAAAAATGATGAGGCAATGAT ATGGCTGGCCGTAAAGGAGGAATCCCTACCGTGGGGGACAACCGTGAGCAAGAAGAGGTGGAGGAGATCGCCACCCTCTCTCCAAGGACATCCACGGTACGCTTGCTGGCCGTCGAAGACTCCTTGGGAGATTTACACAAAAAGTTTGATAGAGTAATGGATACTTTGGAGACACTGACTCGAAGGATGGACGGACTACCGACTCCGGCAAGAATTGAAGCCAACGTAAATAATGATCGGAACGACGGAAACAGAGGAGGCCGACGAGCTCAAAGAAATTTTAGAACTTTGCCCAATCAAAGGAATGATCAAAGAAGGAGGCCAATGGAGAATCCGCTGCGATATGCCGATGATGATTCAATGGAAGAATATGAAGCTTGGCAAAATGGGCAAGAATGTGATTCTTCCAGCGGTGATGAGCAAGAAAATATTTGGAATGATAATGGAGATATTCGAATGAGACGAGTTTATAGAGGACATGAAGCACGAAGGGAAGTTCATCATGATTATAAGATGAAAATTGATCTTCCAACCTATGATGGTAAGCGTGATATTGAATCTTTTTTGGATTGGATTAAAAATACTGAAAATTTCTTCAATTATATGGATACTCCCAATAGAAAGAAAGTGCACTTGGTGGCCCTAAAGCTACGTGGAGGAGCTTCGGCATGGTGGGATCAGCTTGAAATAAACAAACAAAGATACGGCAAGCCACCTGTTCACTCATGGGAGAAGATGAAAAAACTGCTAAAGCACGTTTTTTACCTCCAAACTATGAACAAACGCTATATAATCAGTATCAAAACTGTCGCCAAGGAAGCAGATCACAAAGAGCTTGTAACCGCTCTAAATCTAAAGGCAGAAACACATCCTAATCCTTACAAGATTGGTTGGGTAAAGAAGGACGGAGAAACTTTAGTAAGTGAGATTTGCATCGTGACTAACAGAACATTAGGGAATCTCATAAGATGCCTTAGTGGATCTAAGCCTAAGCAATGGGATCTATCACTAGCACAAGCAGAGTTCGCATTTAACAACATGAGAAACCGGTCAACAAACAAATGCCCCTTTGAAATAGCCGATTGGGACTTTTTAGAAAAAGTAATGGTACAAAAAAAATTGATGGCAGATGAATAA MAGRKGGIPTVGDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHKKFDRVMDTLETLTRRMDGLPTPARIEANVNNDRNDGNRGGRRAQRNFRTLPNQRNDQRRRPMENPLRYADDDSMEEYEAWQNGQECDSSSGDEQENIWNDNGDIRMRRVYRGHEARREVHHDYKMKIDLPTYDGKRDIESFLDWIKNTENFFNYMDTPNRKKVHLVALKLRGGASAWWDQLEINKQRYGKPPVHSWEKMKKLLKHVFYLQTMNKRYIISIKTVAKEADHKELVTALNLKAETHPNPYKIGWVKKDGETLVSEICIVTNRTLGNLIRCLSGSKPKQWDLSLAQAEFAFNNMRNRSTNKCPFEIADWDFLEKVMVQKKLMADE Homology
BLAST of PI0024429.1 vs. ExPASy TrEMBL
Match: A0A5D3CJ99 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00470 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.8e-122 Identity = 259/471 (54.99%), Postives = 282/471 (59.87%), Query Frame = 0
BLAST of PI0024429.1 vs. ExPASy TrEMBL
Match: A0A5A7UQ86 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G001990 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 4.9e-96 Identity = 181/223 (81.17%), Postives = 201/223 (90.13%), Query Frame = 0
BLAST of PI0024429.1 vs. ExPASy TrEMBL
Match: A0A5D3DKV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00260 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 5.5e-71 Identity = 143/209 (68.42%), Postives = 161/209 (77.03%), Query Frame = 0
BLAST of PI0024429.1 vs. ExPASy TrEMBL
Match: A0A5D3CH16 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001440 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 5.1e-69 Identity = 127/146 (86.99%), Postives = 135/146 (92.47%), Query Frame = 0
BLAST of PI0024429.1 vs. ExPASy TrEMBL
Match: A0A5A7U7S6 (E3 ubiquitin-protein ligase SHPRH isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004530 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 8.7e-61 Identity = 160/389 (41.13%), Postives = 194/389 (49.87%), Query Frame = 0
BLAST of PI0024429.1 vs. NCBI nr
Match: TYK11204.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 449.1 bits (1154), Expect = 3.7e-122 Identity = 259/471 (54.99%), Postives = 282/471 (59.87%), Query Frame = 0
BLAST of PI0024429.1 vs. NCBI nr
Match: KAA0057344.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 361.3 bits (926), Expect = 1.0e-95 Identity = 181/223 (81.17%), Postives = 201/223 (90.13%), Query Frame = 0
BLAST of PI0024429.1 vs. NCBI nr
Match: XP_031741035.1 (uncharacterized protein LOC116403692 [Cucumis sativus]) HSP 1 Score: 303.9 bits (777), Expect = 1.9e-78 Identity = 171/296 (57.77%), Postives = 201/296 (67.91%), Query Frame = 0
BLAST of PI0024429.1 vs. NCBI nr
Match: XP_031743026.1 (uncharacterized protein LOC116404533 [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 2.3e-76 Identity = 169/296 (57.09%), Postives = 199/296 (67.23%), Query Frame = 0
BLAST of PI0024429.1 vs. NCBI nr
Match: KAA0056581.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK24263.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 278.1 bits (710), Expect = 1.1e-70 Identity = 143/209 (68.42%), Postives = 161/209 (77.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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