PI0020300.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0020300.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Autophagy-related protein
Location	chr11: 22613150 .. 22615530 (-)
Sequence length	575
RNA-Seq Expression	PI0020300.1
Synteny	PI0020300.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCTCTTCCTTCATCAATTTCGTTTAGTACAGAAAGAGCTTCTCTCGCTGTCTTTGATTTTTGGTACCCAATAATTCGATTCCATTGCTTCCCGATTCCCAAAACCCCTTTGATCATTCTCTATTCTTTTGATTTTTAATTTGGGTGCAGGAACCTTTTTCTTTCGATGGCAAAAAGCTCGTTTAAGTTGGAGCATCCCCTGGGTTAGTTTTTTCTTGTTCATACACAAATCGAGGGTCATATTTTGTGGTTTTTAACAATTTTTTGAGGGATTTTTCTTAGTTTCAAACGTCCAGTTTGATTACATCGCTTGATTGCTTTTAGTCGAAATGATTCGGCTCACGCTTTGTTACTTTTTTATTATGGCTTCATCCGATGGTTGAATTTTCACGTGAGTATTAAGACTTAAATTTTAATTGCGATGTTAAATCGCTTCCTAAACCTAAAACTTGAAGCTCATAATTAGGATATGATTAATGTTTTACATATGAGTTTGATTGATGAGACTCAACCCACATTCTTATGTTGTATGATGAACAACATGAGATTAAAACAACCAATAAACTAATATGTGGGTTTTTTCTGTTGGTTAAAATGTTTATTATAATCAACTATATCAAGTGGCAATTACCATGGCCTGAAATTCATACGCACGAATAAACACTAGAGAAGTTAAGAAATTCACTTAATTTGAATTGACATTCTGAACATTCCAGAAAGGAGACAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTATGATCTTTGTAATTTAGGGATGCATGCAATCGTTTAGTTTTAATATTCTCGTAGTTGTAATGCAATTATTTGATTTCTGTTGGTTATCTGGTTTAGGTGATTGTGGAAAGGGCTGAAAAGAGTGATGTGCCAGAAATTGATAAGAAAAAGTAAGTTGCTTTCTTTTTCTTACTAGTTGAAACACGTTTCAACGTGATGCTTGGGGAATGCTGAAATGCTATACTATATAGTGCTTTAGCTTGATGGTGGCCAAATTTTATTACATTCGTCTTGTTCTGGGGTCCTTTTTGTGGTTAGTGGTGGACTCCTGCTTTGTTTTTCTTTTTTTTTTTTGGTAGACTTCTGCTTTATTTTAGGCTTGTCCTAAAAAAGAGGTCTTTTGAATGCTGTGTGCCTTCTCTATTTTCTGTACTTGATTCATACTCGGTGAAATGGTTCAAATTCCACTATTTTATTGGTTTAACAATGTTCTAGCTATCTGAATCCTTGTATCGTGTACAAAAGAATTTTGTTTGTTGTTTCCCGTCAATGTTGGATGTCTATGATTGTAACATGTTAAGTAGCACACAAGTAGGGATGGAATGGATATAAAATGCAATATTCTATAACAACGTTATGTTGTGGGGGATATGGATCGATAAAGCTCTTTTTTACTTCCGGTAGGAAAGAGGATGAGCAAATTATATGATAGGAATGGTATTAGGGTATTATAAGGGCATCTTAGTAATTAGATAGGGAAGTTTGCTATGAAATTTGGTTACAAATGGAATGGTAGAGCAAGGAAGTAAAACTAGGCATTGATTCGGTTAGTTTAGGGGTTGAGTAATCTCAAGAAAGGGAGGGTCCAAGTTCCTCAAATTATTTGGTTTATCTTGTTTACCTTTATTTTGCAATATATTGTAATATACTTTGGTCTTGTACTGTTTCTAATCAAAGTACAACAATGCCTCTTGAGGGTCTAAAAACTATGTTTCTGAGCCTTAAAATGGTTAACATTAAGAAGAATGGCGAGGAACATGCCAAAAACAAAGATTCCAAGCCTATTTGGAATGATTTTCTTATCCTCACTTAAAAAACATTGTTTTAAAAACGCTTAAAAAGTCGATTCAAATAGACTCTTAAACGTGTTCTCCACCTTAAAAGTTTTGGATTACCACCTTGGATGGGTGAGAAGTCGAACCATCTTCTTCACAAGGCTGTTTATCTAAATGAAAGGTATATTCATTGCAGATATTTAGTTCCTGCTGATTTAACTGTTGGTCAATTTGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTTATTTTTGTGAAGAATATTCTGCCTCCTACCGGTAAGATCAGAAACATAAAATCTACTTTGAATGCCTTCGAATCATATATTGCACATAATCTTGCATATTATCATTTTTCTTATTCTAAACGATTGTTTTGTTTTGTTCTGCAGCTGCAATGATGTCTGCAATTTACGAGGAAAACAAGGACGAAGATGGTTTCCTCTATATGACCTACAGTGGGGAAAACACATTCGGGGCGTGCTGAAACACAATTAGACAGTAAAGACGTAAACGTCTACAGAAAACGGGGG

mRNA sequence

GTTTTCTCTTCCTTCATCAATTTCGTTTAGTACAGAAAGAGCTTCTCTCGCTGTCTTTGATTTTTGGTACCCAATAATTCGATTCCATTGCTTCCCGATTCCCAAAACCCCTTTGATCATTCTCTATTCTTTTGATTTTTAATTTGGGTGCAGGAACCTTTTTCTTTCGATGGCAAAAAGCTCGTTTAAGTTGGAGCATCCCCTGGAAAGGAGACAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATTGTGGAAAGGGCTGAAAAGAGTGATGTGCCAGAAATTGATAAGAAAAAATATTTAGTTCCTGCTGATTTAACTGTTGGTCAATTTGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTTATTTTTGTGAAGAATATTCTGCCTCCTACCGCTGCAATGATGTCTGCAATTTACGAGGAAAACAAGGACGAAGATGGTTTCCTCTATATGACCTACAGTGGGGAAAACACATTCGGGGCGTGCTGAAACACAATTAGACAGTAAAGACGTAAACGTCTACAGAAAACGGGGG

Coding sequence (CDS)

ATGGCAAAAAGCTCGTTTAAGTTGGAGCATCCCCTGGAAAGGAGACAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATTGTGGAAAGGGCTGAAAAGAGTGATGTGCCAGAAATTGATAAGAAAAAATATTTAGTTCCTGCTGATTTAACTGTTGGTCAATTTGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTTATTTTTGTGAAGAATATTCTGCCTCCTACCGCTGCAATGATGTCTGCAATTTACGAGGAAAACAAGGACGAAGATGGTTTCCTCTATATGACCTACAGTGGGGAAAACACATTCGGGGCGTGCTGA

Protein sequence

MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC

Homology

[Close]

BLAST of PI0020300.1 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-56
Identity = 109/118 (92.37%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQ E+ARIREKYPDRIPVIVE+AE+SD+P+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 119
           FVYVVRKRIKLS EKAIFIFVKNILPPTAAMMSAIYEE+KDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of PI0020300.1 vs. ExPASy Swiss-Prot
Match: Q8S927 (Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-55
Identity = 108/117 (92.31%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 118
           FVYVVRKRIKLS EKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of PI0020300.1 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-55
Identity = 106/118 (89.83%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MA++SFKLEHPLERRQ ESARIREKY DRIPVIVE+A+K+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 119
           FVYVVRKRIKLSPEKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of PI0020300.1 vs. ExPASy Swiss-Prot
Match: Q69RC4 (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-55
Identity = 106/118 (89.83%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MA++SFKLEHPLERRQ ESARIREKY DRIPVIVE+A+K+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 119
           FVYVVRKRIKLSPEKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of PI0020300.1 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54
Identity = 106/117 (90.60%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MA+SSFKLEHPLERRQ E+ RIREKYPDRIPVIVE+AE+SD+P+IDKKKYLVPADLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 118
           FVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of PI0020300.1 vs. ExPASy TrEMBL
Match: A0A6J1FV37 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111448369 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of PI0020300.1 vs. ExPASy TrEMBL
Match: A0A5A7V165 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00050 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 7   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 66

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 67  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 125

[Close]

BLAST of PI0020300.1 vs. ExPASy TrEMBL
Match: A0A6J1JFZ0 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111484151 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of PI0020300.1 vs. ExPASy TrEMBL
Match: A0A0A0LN58 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G418350 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of PI0020300.1 vs. ExPASy TrEMBL
Match: A0A1S3C2M9 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103495965 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of PI0020300.1 vs. NCBI nr
Match: KAA0059575.1 (Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK24205.1 Ubiquitin-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 7   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 66

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 67  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 125

[Close]

BLAST of PI0020300.1 vs. NCBI nr
Match: KAG6570885.1 (NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1    MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
            MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 988  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 1047

Query: 61   FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
            FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 1048 FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 1106

[Close]

BLAST of PI0020300.1 vs. NCBI nr
Match: XP_004151892.1 (autophagy-related protein 8C-like [Cucumis sativus] >XP_008455886.1 PREDICTED: autophagy-related protein 8c [Cucumis melo] >XP_022943693.1 autophagy-related protein 8c [Cucurbita moschata] >XP_022943694.1 autophagy-related protein 8c [Cucurbita moschata] >XP_022986404.1 autophagy-related protein 8c [Cucurbita maxima] >XP_038902002.1 autophagy-related protein 8C-like isoform X1 [Benincasa hispida] >KGN63248.1 hypothetical protein Csa_022236 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of PI0020300.1 vs. NCBI nr
Match: XP_023512507.1 (autophagy-related protein 8c [Cucurbita pepo subsp. pepo] >XP_023512508.1 autophagy-related protein 8c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-57
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 120
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG C
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGEC 119

[Close]

BLAST of PI0020300.1 vs. NCBI nr
Match: XP_022140546.1 (autophagy-related protein 8c [Momordica charantia])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 118
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of PI0020300.1 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.2e-56
Identity = 108/117 (92.31%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 118
           FVYVVRKRIKLS EKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of PI0020300.1 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.2e-56
Identity = 108/117 (92.31%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 118
           FVYVVRKRIKLS EKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]

BLAST of PI0020300.1 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 212.6 bits (540), Expect = 1.7e-55
Identity = 107/117 (91.45%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MA SSFK EHPLE+RQ E+ARIREKYPDRIPVIVERAEKSDVP+ID+KKYLVPADLTVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 118
           FVYVVRKRIKLSPEKAIFIFVKNILPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of PI0020300.1 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.7e-52
Identity = 100/118 (84.75%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFK+ +PLE R  ES+RIREKYPDRIPVIVE+A +SDVP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 119
           FVYVVRKRIKL  EKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of PI0020300.1 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.7e-52
Identity = 100/118 (84.75%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60
           MAKSSFK+ +PLE R  ES+RIREKYPDRIPVIVE+A +SDVP+IDKKKYLVPADLTVGQ
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 119
           FVYVVRKRIKL  EKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG+
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 133

The following BLAST results are available for this feature:

BLAST of PI0020300.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
M1C146	3.4e-56	92.37	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q8S927	1.7e-55	92.31	Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1	[more]
Q2XPP5	3.7e-55	89.83	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]
Q69RC4	3.7e-55	89.83	Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A P...	[more]
A2YS06	1.4e-54	90.60	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]

BLAST of PI0020300.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV37	1.7e-58	100.00	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111448369 PE=3 SV=...	[more]
A0A5A7V165	1.7e-58	100.00	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1JFZ0	1.7e-58	100.00	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111484151 PE=3 SV=1	[more]
A0A0A0LN58	1.7e-58	100.00	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G418350 PE=3 SV=1	[more]
A0A1S3C2M9	1.7e-58	100.00	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103495965 PE=3 SV=1	[more]

BLAST of PI0020300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059575.1	3.5e-58	100.00	Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK24205.1 Ubiqui...	[more]
KAG6570885.1	3.5e-58	100.00	NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrospe...	[more]
XP_004151892.1	3.5e-58	100.00	autophagy-related protein 8C-like [Cucumis sativus] >XP_008455886.1 PREDICTED: a...	[more]
XP_023512507.1	1.3e-57	99.16	autophagy-related protein 8c [Cucurbita pepo subsp. pepo] >XP_023512508.1 autoph...	[more]
XP_022140546.1	1.4e-56	100.00	autophagy-related protein 8c [Momordica charantia]	[more]

BLAST of PI0020300.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62040.1	1.2e-56	92.31	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	1.2e-56	92.31	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	1.7e-55	91.45	Ubiquitin-like superfamily protein	[more]
AT4G21980.1	6.7e-52	84.75	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	6.7e-52	84.75	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..118 e-value: 1.9E-59 score: 201.0
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 1..117
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 12..114 e-value: 6.05357E-71 score: 205.387
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 e-value: 5.4E-52 score: 174.3
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..117
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 3..117

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0020300	PI0020300	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020300.1-exon	PI0020300.1-exon-chr11:22613150..22613290	exon
PI0020300.1-exon	PI0020300.1-exon-chr11:22613404..22613522	exon
PI0020300.1-exon	PI0020300.1-exon-chr11:22614604..22614656	exon
PI0020300.1-exon	PI0020300.1-exon-chr11:22614756..22614811	exon
PI0020300.1-exon	PI0020300.1-exon-chr11:22615325..22615530	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020300.1-three_prime_utr	PI0020300.1-three_prime_utr-chr11:22613150..22613195	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020300.1-cds	PI0020300.1-cds-chr11:22613196..22613290	CDS
PI0020300.1-cds	PI0020300.1-cds-chr11:22613404..22613522	CDS
PI0020300.1-cds	PI0020300.1-cds-chr11:22614604..22614656	CDS
PI0020300.1-cds	PI0020300.1-cds-chr11:22614756..22614811	CDS
PI0020300.1-cds	PI0020300.1-cds-chr11:22615325..22615361	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020300.1-five_prime_utr	PI0020300.1-five_prime_utr-chr11:22615362..22615530	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0020300.1	PI0020300.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule