PI0018924.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATGTCTGAGTAATCCTCATAACAGAACTGAGAAAAACGTGGAAGAAAGTATGTTCAACCGTTTTTCCCAAAGAGTTGCAAATCACCTTATGTCTACAAACCCTACAGTAGATAAGAAGTTTATCATTGAAAGGTTGAAGGCATTGGGAGCAACAAATTTCGAAGGGACCACTGATCCAGTCGATGCGGAGAAATGGTTGACCTTGGTTGAGAAGTGTTTTAGGGTGATGGAGTGCCTCGAAGAAAAGAAAGTGAAATTAGCAACATTTTTATTGCAAGGAAGCGTCGAAGATTGGTGGACTCTCCACGTGGCAAAAGCGGGCGGAATGAGCTTTGTTTCTTGGAGAGAGTTTCGAAAGACGTTTTAG ATGAAATGTCTGAGTAATCCTCATAACAGAACTGAGAAAAACGTGGAAGAAAGTATGTTCAACCGTTTTTCCCAAAGAGTTGCAAATCACCTTATGTCTACAAACCCTACAGTAGATAAGAAGTTTATCATTGAAAGGTTGAAGGCATTGGGAGCAACAAATTTCGAAGGGACCACTGATCCAGTCGATGCGGAGAAATGGTTGACCTTGGTTGAGAAGTGTTTTAGGGTGATGGAGTGCCTCGAAGAAAAGAAAGTGAAATTAGCAACATTTTTATTGCAAGGAAGCGTCGAAGATTGGTGGACTCTCCACGTGGCAAAAGCGGGCGGAATGAGCTTTGTTTCTTGGAGAGAGTTTCGAAAGACGTTTTAG ATGAAATGTCTGAGTAATCCTCATAACAGAACTGAGAAAAACGTGGAAGAAAGTATGTTCAACCGTTTTTCCCAAAGAGTTGCAAATCACCTTATGTCTACAAACCCTACAGTAGATAAGAAGTTTATCATTGAAAGGTTGAAGGCATTGGGAGCAACAAATTTCGAAGGGACCACTGATCCAGTCGATGCGGAGAAATGGTTGACCTTGGTTGAGAAGTGTTTTAGGGTGATGGAGTGCCTCGAAGAAAAGAAAGTGAAATTAGCAACATTTTTATTGCAAGGAAGCGTCGAAGATTGGTGGACTCTCCACGTGGCAAAAGCGGGCGGAATGAGCTTTGTTTCTTGGAGAGAGTTTCGAAAGACGTTTTAG MKCLSNPHNRTEKNVEESMFNRFSQRVANHLMSTNPTVDKKFIIERLKALGATNFEGTTDPVDAEKWLTLVEKCFRVMECLEEKKVKLATFLLQGSVEDWWTLHVAKAGGMSFVSWREFRKTF Homology
BLAST of PI0018924.1 vs. ExPASy TrEMBL
Match: A0A5D3BTQ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00590 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.2e-29 Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of PI0018924.1 vs. ExPASy TrEMBL
Match: A0A5D3BB91 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001760 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25 Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of PI0018924.1 vs. ExPASy TrEMBL
Match: A0A5A7U067 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00470 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.5e-25 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 0
BLAST of PI0018924.1 vs. ExPASy TrEMBL
Match: A0A5A7SJ99 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00100 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 4.3e-25 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 0
BLAST of PI0018924.1 vs. ExPASy TrEMBL
Match: A0A5D3BWX9 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00130 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of PI0018924.1 vs. NCBI nr
Match: KAA0035024.1 (hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa] >TYK02358.1 hypothetical protein E5676_scaffold155G00590 [Cucumis melo var. makuwa]) HSP 1 Score: 138.3 bits (347), Expect = 4.5e-29 Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of PI0018924.1 vs. NCBI nr
Match: TYJ95881.1 (retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]) HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25 Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of PI0018924.1 vs. NCBI nr
Match: KAA0047616.1 (uncharacterized protein E6C27_scaffold115G00890 [Cucumis melo var. makuwa] >TYK08273.1 uncharacterized protein E5676_scaffold648G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 124.8 bits (312), Expect = 5.2e-25 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 0
BLAST of PI0018924.1 vs. NCBI nr
Match: XP_038896366.1 (uncharacterized protein LOC120084630 [Benincasa hispida]) HSP 1 Score: 124.0 bits (310), Expect = 8.9e-25 Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = 0
BLAST of PI0018924.1 vs. NCBI nr
Match: KAA0026280.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21476.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 8.9e-25 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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