PI0017809.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0017809.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr10: 1000416 .. 1000946 (+)
Sequence length	531
RNA-Seq Expression	PI0017809.1
Synteny	PI0017809.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACGTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAAACCATTAGACTCACATGCTGCTCGTACTAGATCAACGGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATATGGTCGAAGTTGATACCAACATGTCGGACCCCAAAAAGACAAGAGGTCGGACCAAGATGCAAACAATAGCGGTGGAGCCAGAAATAAAACTAAATATAAGGTACAACGAATATAGACAACCTATTGGAGAAACATCAGTTGAGTTGTCCTCATTTTTGGGTTCACTTGTCATAGAACTGGTTCCAGTAAATGTTGAAACGTGGAAGAAACTTTCAACGAAACAGAAAGAAATATTCTGGCATTCTATTCAAGTATGTAATGTATAA

mRNA sequence

ATGGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACGTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAAACCATTAGACTCACATGCTGCTCGTACTAGATCAACGGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATATGGTCGAAGTTGATACCAACATGTCGGACCCCAAAAAGACAAGAGGTCGGACCAAGATGCAAACAATAGCGGTGGAGCCAGAAATAAAACTAAATATAAGGTACAACGAATATAGACAACCTATTGGAGAAACATCAGTTGAGTTGTCCTCATTTTTGGGTTCACTTGTCATAGAACTGGTTCCAGTAAATGTTGAAACGTGGAAGAAACTTTCAACGAAACAGAAAGAAATATTCTGGCATTCTATTCAAGTATGTAATGTATAA

Coding sequence (CDS)

ATGGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACGTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAAACCATTAGACTCACATGCTGCTCGTACTAGATCAACGGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATATGGTCGAAGTTGATACCAACATGTCGGACCCCAAAAAGACAAGAGGTCGGACCAAGATGCAAACAATAGCGGTGGAGCCAGAAATAAAACTAAATATAAGGTACAACGAATATAGACAACCTATTGGAGAAACATCAGTTGAGTTGTCCTCATTTTTGGGTTCACTTGTCATAGAACTGGTTCCAGTAAATGTTGAAACGTGGAAGAAACTTTCAACGAAACAGAAAGAAATATTCTGGCATTCTATTCAAGTATGTAATGTATAA

Protein sequence

MVNDTDNVAKPSIEREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTVRRLPIEEVQSQSEENMVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQPIGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQVCNV

Homology

[Close]

BLAST of PI0017809.1 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53
Identity = 118/163 (72.39%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS+RP N+PLDS A RTRS V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVNVETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53
Identity = 118/163 (72.39%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS+RP N+PLDS A RTRS V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVNVETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. ExPASy TrEMBL
Match: A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.1e-53
Identity = 117/163 (71.78%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQSKRP N+PLDS A  TRS V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVN+ETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.0e-52
Identity = 116/163 (71.17%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS++P N+PLDS A RTR  V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVNVETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. ExPASy TrEMBL
Match: A0A5A7UVF2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003770 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.9e-52
Identity = 119/173 (68.79%), Postives = 134/173 (77.46%), Query Frame = 0


Query: 4   DTDNVAKPSIEREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLD 63
           +T+  A    E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS+RP N+PLD
Sbjct: 12  ETEGEALHLREKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRRPPNRPLD 71

Query: 64  SHAARTRSTVRRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKL 123
           S A RTRS VR+LP+EEV+SQ EEN      EV TN   PKKTR RTKMQTIA+EPE+KL
Sbjct: 72  SPAGRTRSAVRKLPVEEVESQLEENENVYCEEVHTNEPSPKKTRDRTKMQTIAMEPEMKL 131

Query: 124 NIRYNEYRQPIGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           +IRYN Y QPIGETSV LSSFLG+LV E+VPVNVET KK+ST+QKEI WHSIQ
Sbjct: 132 DIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETLKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 218.8 bits (556), Expect = 3.8e-53
Identity = 118/163 (72.39%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS+RP N+PLDS A RTRS V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVNVETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 218.8 bits (556), Expect = 3.8e-53
Identity = 118/163 (72.39%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS+RP N+PLDS A RTRS V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVNVETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. NCBI nr
Match: KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-52
Identity = 117/163 (71.78%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQSKRP N+PLDS A  TRS V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVN+ETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 4.2e-52
Identity = 116/163 (71.17%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 14  EREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLDSHAARTRSTV 73
           E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS++P N+PLDS A RTR  V
Sbjct: 22  EKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVV 81

Query: 74  RRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKLNIRYNEYRQP 133
           R+LP+EEV+SQ EEN      EV T    PKKTRGRTKMQTIA+EPE+KL+IRYN Y QP
Sbjct: 82  RKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQP 141

Query: 134 IGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           IGETSV LSSFLG+LV E+VPVNVETWKK+ST+QKEI WHSIQ
Sbjct: 142 IGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of PI0017809.1 vs. NCBI nr
Match: KAA0057491.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-51
Identity = 119/173 (68.79%), Postives = 134/173 (77.46%), Query Frame = 0


Query: 4   DTDNVAKPSIEREIRETSPSPDPLHHNNVDCEEAATPLPSSHVNEIIHPQSKRPQNKPLD 63
           +T+  A    E+EIRETSP PDPL       EEA TPLPSSHVN  IHPQS+RP N+PLD
Sbjct: 12  ETEGEALHLREKEIRETSPLPDPLP------EEATTPLPSSHVNATIHPQSRRPPNRPLD 71

Query: 64  SHAARTRSTVRRLPIEEVQSQSEEN----MVEVDTNMSDPKKTRGRTKMQTIAVEPEIKL 123
           S A RTRS VR+LP+EEV+SQ EEN      EV TN   PKKTR RTKMQTIA+EPE+KL
Sbjct: 72  SPAGRTRSAVRKLPVEEVESQLEENENVYCEEVHTNEPSPKKTRDRTKMQTIAMEPEMKL 131

Query: 124 NIRYNEYRQPIGETSVELSSFLGSLVIELVPVNVETWKKLSTKQKEIFWHSIQ 173
           +IRYN Y QPIGETSV LSSFLG+LV E+VPVNVET KK+ST+QKEI WHSIQ
Sbjct: 132 DIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETLKKISTRQKEILWHSIQ 178

The following BLAST results are available for this feature:

BLAST of PI0017809.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017809.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBP2	1.8e-53	72.39	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0...	[more]
A0A5A7SRN7	1.8e-53	72.39	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7TIU1	9.1e-53	71.78	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00...	[more]
A0A5A7TLJ2	2.0e-52	71.17	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003...	[more]
A0A5A7UVF2	5.9e-52	68.79	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00...	[more]

BLAST of PI0017809.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032201.1	3.8e-53	72.39	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0051001.1	3.8e-53	72.39	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0041269.1	1.9e-52	71.78	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0042856.1	4.2e-52	71.17	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0057491.1	1.2e-51	68.79	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of PI0017809.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 30..172
None	No IPR available	PANTHER	PTHR33144:SF27	SUBFAMILY NOT NAMED	coord: 30..172

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0017809	PI0017809	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017809.1-exon	PI0017809.1-exon-chr10:1000416..1000946	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017809.1-cds	PI0017809.1-cds-chr10:1000416..1000946	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0017809.1	PI0017809.1-protein	polypeptide