PI0015276.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0015276.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 15000127 .. 15002751 (-)
Sequence length	363
RNA-Seq Expression	PI0015276.1
Synteny	PI0015276.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGCACCGGCGCTGATGATACCAGCCGCCGTGGCGATGATGATTATGATGCTCATTCCAACTGCATGCGGCGGTGCTTTTACATCCTTTAAACCACTCAACAACCACAGTTCTGGGGGTAAGTTTGTAATAATTTTTTTAAAAAAATTATTCAATAAAATACTTCTATAAGTATAGGGTTCCTTTCCTCCAAAAGCTTGGTATTTAAAAAAATAATAATAATTGGCCTTTACTCATTTTGATTATTCACACGTTGTACTTCTCAAATTTGGTCTAATAATTAATCTTTCTACATTTTCAAAAAGTCAATTTTAGTAGTATTTTAATTTTAAGGTTCACGTCTAGTAAGTATACAAAAATTAAAAATCTATTTTAATCCAACTTTAGCATTGAAAACATATTCTATAATTTATTGGGTCAGCTAATTAAACTTAAAGTTGTGTCTAACATTTGACGCCAACAAGAGCTTAATTTGACTGACAATTATATGTAATATACTGATGACATGAAGTGCGTGGTTTGAATCTACCACCTTCAATTTGTATGTACATTTATTTGTATGTATATATATATATCATTCTTAATATATTTGAAAGGTTAAATTATCGATATAATTTTTTATCCTTTGAACTTTTAAAAGTCTATCTAACAAGTCTTTTTTTTAACTTTTAAATTTTATGTTTAATTTGTTAAAAAATTATTGTTTTAGAAAAAAATTTAATTGATGTATTAAATATTAATATAATCTTTTTGGTTAATGGAAGTCGAGAATTTAAACTTTTTTTGTGTAGTAAATTTTTGGATTTTACAAAAACATAAGAGTTTTGTGACAGAATTTTTAATTTTGAAAATTTTAGAAATAAATAAACACATACCTAAAATTTAAAGACTAAATTAATTTGGTAAAGGAACACCTTCTAAGTTTCACGTTTAAAAAATTAATAGATCTTTTGAAAACATGTTATAATAGTTTTTCCTAGTCCTTCTCGTGTCGTGCAAGATGACTACCAAGATTTATGAAAATGTTTATTTTTTTATCTTATATCCAAACTATCAATTCCTTTGAGTTTTCTTGGGATTCACTTAATTTTTACAAATCTTACCTAATCTTCTTTTTTCTTCGCATAATTTAAAATGGTCAAATAATTGATAAATCTATTTTGATAATTGATAGATCAAATTGAAAATTCATGTAAACATAACTTGGGACTAAGATTTGCAAGATAATATAAGATTTGTAAAGATGGCAGGAGAAAAATTGAGAAGATTTGAAACATCGCATAATATTTGAAACGTTATGTCGATTTCAGTGTTCCTCACGGACAAAATAACATCGAGATCCTATATATTTGGGCTTTCTTTGTAAAGTCTTTGGCATGATAAACACCTAGCTAGATTCTATATATTTGAGCTTTTCAATGAAATCTGGCAAATCTAACACCGAATTTCTATATAATTACCAAATCTTACTTAATGTTTCACAAATTTTGATCTTGCCCAAAATTGAAAGATGACAATGAAACAAAATCTATTTTTATCATTAGTAAATTCATCTGAAATTTTGGAAAATCAGATAATTTCGAAATATAAATTGTGTAAGAAATTTGAAAAATTATTTGAGATTTGATGAAGATAAGAGAAATTTTGAAATGACATATAAGATTTGGATGAGATTTGGAAAGATTAAATCCGATTTAAATACTATTCAAAATTTTATTGAGAAAATTCAAATCAGTTGATAAGAGAAAAGTTGATTTGTTAACTAAATCTCGTTCGTCAATCTCAATCAAGATGAATAAAAAAAATTAATTTAACAAGTTTTCATAGTGCTAGTTTTGAAAAGTGAAACTTAAAAACTATTTATGATAATTTCCCACAACAAAAGCTTCATACATATGTTTACAATAATATAATATTGTTTAAGAAAAATACCTTTTGGACTCTATTTTTTAGTAATAGGTACATTTGGTATCTAAGTTTTCAAAATGCATTTATTAGTAAAAATATAGGGACCAAAAATGTATTTTTTCCTAGTTAAAAAGCATTTTTAGTCCCTAAATTTTTATAAAGTAAAATTTGATTATTGTATTTTAAATTTTATAACAATTTATATGGTATTATTATTATTATTATTATTATTATTATTATTATTTTACTATGAAAAAACTTTATCTGCACTTCTAACATTATATATCTATTCTTAGACAACAAGCTTTTAATTTTTGTGTTTAAGAAGCGAAAATTTTCAAATTTTTGTATTTGTCTCAAAGATCTTAAAAGTTAGAAAATGATGGAATAAGTGAATGATTATGATGATACACTAAAATAATGGAATTTGAACTCAAATTGGAAAAAAAAAATATTTTGTTTGTTTGATTAGGTTTGGTAAAATACATGGTTGGAGAGGAGGATATTAAATCAAATTTTGTAATGGAATCGCACATCAGCAGAATGTTGGCAGATTCTGAAGACTTCGAAACAATCTCAACTAACAACGCCACCCAAGTTTCCACGGGCGAATGCGACCGGCCGCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAATCGTGAACATCCTTGTTAG

mRNA sequence

ATGGCGACTGCACCGGCGCTGATGATACCAGCCGCCGTGGCGATGATGATTATGATGCTCATTCCAACTGCATGCGGCGGTGCTTTTACATCCTTTAAACCACTCAACAACCACAGTTCTGGGGGTTTGGTAAAATACATGGTTGGAGAGGAGGATATTAAATCAAATTTTGTAATGGAATCGCACATCAGCAGAATGTTGGCAGATTCTGAAGACTTCGAAACAATCTCAACTAACAACGCCACCCAAGTTTCCACGGGCGAATGCGACCGGCCGCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAATCGTGAACATCCTTGTTAG

Coding sequence (CDS)

ATGGCGACTGCACCGGCGCTGATGATACCAGCCGCCGTGGCGATGATGATTATGATGCTCATTCCAACTGCATGCGGCGGTGCTTTTACATCCTTTAAACCACTCAACAACCACAGTTCTGGGGGTTTGGTAAAATACATGGTTGGAGAGGAGGATATTAAATCAAATTTTGTAATGGAATCGCACATCAGCAGAATGTTGGCAGATTCTGAAGACTTCGAAACAATCTCAACTAACAACGCCACCCAAGTTTCCACGGGCGAATGCGACCGGCCGCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAATCGTGAACATCCTTGTTAG

Protein sequence

MATAPALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVMESHISRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC

Homology

[Close]

BLAST of PI0015276.1 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.9e-55
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MATAPALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVME 60
           MATAPALMIPAA+AMM+MMLIPTACGGA TSFKPLNNH+SGGLVKYMV EEDIKSNFVME
Sbjct: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60

Query: 61  SHISRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 120
           SHISRMLADS+DFET STNNATQVS GECDRPPRYDSCLG KRNTPPPQNCST+NREHPC
Sbjct: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]

BLAST of PI0015276.1 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.3e-30
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVMESHI 63
           A A+MIPAA+A+MI++L PT+   A T+FKPLNN +S    KY++G++DI S F+MESHI
Sbjct: 3   AAAVMIPAAMAIMILLLNPTS-SDALTTFKPLNNDTSAA-GKYLIGDQDIDSEFLMESHI 62

Query: 64  SRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           SR+LA S+DF+T  TN+A + S G C+RPPRYDSCLG K N PPP+NC T+NR +PC
Sbjct: 63  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of PI0015276.1 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.2e-29
Identity = 75/119 (63.03%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMML-IPTACGGAFTSFKP-LNNHSSGGLVKYMVGEEDIKSNFVMES 63
           A ALMIPAAV  MI++L IP++C  A T+F+P L+NHSS G  K M+GEED++  F+MES
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSC-DALTTFQPLLSNHSSYG-GKLMMGEEDMELEFLMES 62

Query: 64  HISRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           HISR+LA S++++T ST NA + S G CDRPPRYDSCLG KRN PPP NCS YNR +PC
Sbjct: 63  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]

BLAST of PI0015276.1 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29
Identity = 68/117 (58.12%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVMESHI 63
           A A++IPAA+A+MI++L PT    A TSFKPLNN +S    KY++G++D+ S F+MESHI
Sbjct: 3   AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDLDSEFLMESHI 62

Query: 64  SRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           SR+LA S++F+T  TN+A + S G C RPPRYDSCLG K N PPP+NC T+NR +PC
Sbjct: 63  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of PI0015276.1 vs. ExPASy TrEMBL
Match: A0A5D3BS53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002320 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.5e-27
Identity = 72/119 (60.50%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMML-IPTACGGAFTSFKP-LNNHSSGGLVKYMVGEEDIKSNFVMES 63
           A A MIPAAV  MI++L IP++C  A T+F+P L+NH+S G  + MVGEED+   F+MES
Sbjct: 3   ASATMIPAAVVTMILLLNIPSSC-EALTTFEPLLSNHTSYG-EQLMVGEEDMDMEFIMES 62

Query: 64  HISRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           HISR+LA S++F+T ST +A + S G C RPPRYDSCLG KRN PPP NC TYNR +PC
Sbjct: 63  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 119

[Close]

BLAST of PI0015276.1 vs. NCBI nr
Match: XP_011651393.1 (uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hypothetical protein Csa_009536 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 8.0e-55
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MATAPALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVME 60
           MATAPALMIPAA+AMM+MMLIPTACGGA TSFKPLNNH+SGGLVKYMV EEDIKSNFVME
Sbjct: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60

Query: 61  SHISRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 120
           SHISRMLADS+DFET STNNATQVS GECDRPPRYDSCLG KRNTPPPQNCST+NREHPC
Sbjct: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]

BLAST of PI0015276.1 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 141.0 bits (354), Expect = 6.8e-30
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVMESHI 63
           A A+MIPAA+A+MI++L PT+   A T+FKPLNN +S    KY++G++DI S F+MESHI
Sbjct: 3   AAAVMIPAAMAIMILLLNPTS-SDALTTFKPLNNDTSAA-GKYLIGDQDIDSEFLMESHI 62

Query: 64  SRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           SR+LA S+DF+T  TN+A + S G C+RPPRYDSCLG K N PPP+NC T+NR +PC
Sbjct: 63  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of PI0015276.1 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 9.9e-29
Identity = 69/117 (58.97%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVMESHI 63
           A A++IPAA+A+MI++L PT    A TSFKPLNN +S    KY++G++DI S F+MESHI
Sbjct: 3   AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDIDSEFLMESHI 62

Query: 64  SRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           SR+LA S++F+T  TN+A + S G C RPPRYDSCLG K N PPP+NC T+NR +PC
Sbjct: 63  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of PI0015276.1 vs. NCBI nr
Match: KGN57781.1 (hypothetical protein Csa_009565 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-28
Identity = 75/119 (63.03%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMML-IPTACGGAFTSFKP-LNNHSSGGLVKYMVGEEDIKSNFVMES 63
           A ALMIPAAV  MI++L IP++C  A T+F+P L+NHSS G  K M+GEED++  F+MES
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSC-DALTTFQPLLSNHSSYG-GKLMMGEEDMELEFLMES 62

Query: 64  HISRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           HISR+LA S++++T ST NA + S G CDRPPRYDSCLG KRN PPP NCS YNR +PC
Sbjct: 63  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]

BLAST of PI0015276.1 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 68/117 (58.12%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 4   APALMIPAAVAMMIMMLIPTACGGAFTSFKPLNNHSSGGLVKYMVGEEDIKSNFVMESHI 63
           A A++IPAA+A+MI++L PT    A TSFKPLNN +S    KY++G++D+ S F+MESHI
Sbjct: 3   AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDLDSEFLMESHI 62

Query: 64  SRMLADSEDFETISTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 121
           SR+LA S++F+T  TN+A + S G C RPPRYDSCLG K N PPP+NC T+NR +PC
Sbjct: 63  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

The following BLAST results are available for this feature:

BLAST of PI0015276.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015276.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L711	3.9e-55	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1	[more]
A0A6J1KBP5	3.3e-30	59.83	uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854...	[more]
A0A0A0LCJ4	6.2e-29	63.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1	[more]
A0A6J1G927	8.2e-29	58.12	uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520...	[more]
A0A5D3BS53	4.5e-27	60.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0015276.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651393.1	8.0e-55	91.67	uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hypothetical ...	[more]
XP_022998105.1	6.8e-30	59.83	uncharacterized protein LOC111492854 [Cucurbita maxima]	[more]
KAG6607029.1	9.9e-29	58.97	hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN57781.1	1.3e-28	63.03	hypothetical protein Csa_009565 [Cucumis sativus]	[more]
XP_022948338.1	1.7e-28	58.12	uncharacterized protein LOC111452044 [Cucurbita moschata]	[more]

BLAST of PI0015276.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0015276	PI0015276	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0015276.1-exon	PI0015276.1-exon-chr06:15000127..15000365	exon
PI0015276.1-exon	PI0015276.1-exon-chr06:15002628..15002751	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0015276.1-cds	PI0015276.1-cds-chr06:15000127..15000365	CDS
PI0015276.1-cds	PI0015276.1-cds-chr06:15002628..15002751	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0015276.1	PI0015276.1-protein	polypeptide